Rorug03G0107500

No apical meristem-associated C-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0002165
Physical Location & Seq
Reverse (-)
8633450 .. 8638399
4950 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0107500.1

Sequence Viewer

Length: 2823 bp
ATGGAGGAGGACCACGCGCCCGGCGCGTGCAAACACTCTCTCAACCTCCCATCAATTTCCCCCACCGAACCTCTCTCCACCGAAACCCTAGCTTCCCTGAGATCCCTAATCGTCAACCCCTCAACTCCCTCTCCCGCAATCTCTTCAATCATCGAAACCCTAACTCGCTCTCTCCAACTCAGTCGCGACCCTCTCCGCACTCTCAAGATCCTCTCCGACCTGGCCGCCCGACACCCCCACCTCTCCGCCCTCGTCTTCCACTCCGTCCGCTCCGACTCGCTCCTCTCCACCGAGTCGACTCGCGTCGCCGCCGAGTCACTCGATGTCTTGGCTTCGATCGCAGAGTGGAATCGAGAGCTAGCGCCGGCTGTTGAGGAAATCGACGACCGGTTGTTCGCCTCGCTTTGTTTTAGTCCTTCTCCGGCGATACGGCCGTGGCTTCTCAGAAACGCCGAGAGGTTCGGTGTTCAGCCTTACTTGCTATCAATCCTGTTTCTAGGGTTTACGAAGGATCCGTATCCGAATGTGAGGAAAGCTGCATTGGATGGACTCGTTGGTTTGAGTAAGAGCGGCGTTATTGACGACGGTGATATGATCAGAGGCTGCTACTTCCGCGCCGGTGAGCTTCTAAACGACATGGAAGACGGCGTTAGGTCCGCTGCAATTCGAGCGGTGTTTGCTTGGGGTTTAACACTAATGGCTTGCGATTCGGAGGCCAAAGCGTATTGGTCTGATGAAGTATTTGTCAAGATTTGTTCGATGGTAAGAGACATGAGCATGGAGGTCAGGATTGAAGCTTTTTATGCCCTTGGGAAGATAGGAATGGTATCTGAAGATATTCTTTTGCAAACCCTGTCAAAGAAAGTCCTGGTGGCTACTAAAGAAAAGAAATCTCTTGCTCAGTGTTCCGATGAACAACTGGAAGTATCAGGGTCTAGTGTTGCTGGAGCTTTTATGCATGGACTTGAGGATGAATTCCATGAGGTACGAAAAGCTGCATGTCATTCTTTGGGTACACTCACCATCCTCTCTTCCAAGTTTGCTGGAGAAGCCTTGAACTTACTGATGGATGTACTGAATGATGACTCAATGCTTGTGCGGTTACAAGCTTTTGAAACTATGCATCAAATGGCAACTTTTGGTCATCTGAAGGTGCAAGAAAAACACATGCATATGTTTCTTGGCACTCTGGTTGACCGTAATACCCTGACAAGATCTGCTGCAAGGAAAGTACTTAAATTGGCAAAGCTGCCAGATTTGAAGTTGTTTAGATCAACTATTGATACCCTTTTAGATAACTTGGAAATGTGTCCACAGGATGAAGCAGATATATTAAATGTTTTGTTTCATATTGGACGAAATCATGGAAAGTTTGTGGTCCGCATTATTGAGGAAGTTTCTCAGCAGATGGAGCCAGTGTCTAATGGCAAGTTAGGCTTTGATAACGTGAGGGTGGGCGCCTTGCTAGTTCTGGCCATCTCAGCTCCACTTTCACAAGAACGTGATTGCAGTATCCCACCTAGTATATTTTCTTATGCAGTTACATACCTGGGAAGGATTTCTCATGCTTTGAGTGACATTATTCATCAAGATGGCCTGTTGAATTACTTGTCTCAATGCAGTAGATCCTCTGGACCATATGATATGGAGTTTGACTTCAGCGCGAGGGAGTTACCTGGTTCCATTGCAATGCCATTGCCACAGAAAAGAGGTGGAACCTCTGAAATCTTGTCTCCAACAGTTAAGAAACCAAGGGAGGCTGGAAATTCTCTTGTAGAATACAGTCTAGATGTGCAAGATGAAGTGACCAAGTCAATGAATGTTGTTCTTGAAAAGGTGAAGGATATCTGGCCATTTGTACAAGCTGGATTCATGACTGAAGGACTCAGGACTTTAAGAAGTTGCAGGGAAGAATTGGCAACATTGACGTCTGGCTCTATTGCATCTGGTGGTATCTTTGCCTTTATGATGCAGTATATCAAGATCATGAAACTGCTTGCAAAGGCATGGGTGAACTTCCTGCCTTCAAGACACCTTCCTTCTAGCGGGATGGGAGACTTGGAATTTGCGTTGGCAAAGCTAGACGCGAGGCTTAGTGAACTGAAAAGTACGTTTATAGGATTGTCTAAAGTGGAAGAGTTGCATATTTTGGAGCTGATACTTGTGACTTGTATGCTCAAGCTTTCTAAAGTTGAAATTTGCTGCCATCTTGGTACTTTGAGAAAGCTCTCTTGTACAATGGCACATGCGGAATCTCTCCTTGAAGATGGAACTGTTGAACCATCCAGGTTTCTGATTGAAGTCAGAAAATTATTATCTGAAATTGGGACCTCTCTCAATGGTAGTTCCTGTAATCCAATTCTTTTTAGAAGAGTACTGGAAAGTTTCTTCCTTGAGCGGCTTGTGTTATGTGGTGGACTAAAGCACATAAAGGCAGATCTGGACATACCTGACAATGACTACGAACATCCTCTTCGCTTTGTCGCAGGGTTGCCCGTTGGTATACCATGCCACATCACTCTTCATAATGTTTCGGTTGAAAGCAGATTATGGCTCAAAATGACTGCCAATGGAATTGATGATACTCAGTTTGTCTACTTGGATTCAAACCTTTTTGGAGGCTGCGATGATCATAGAATAGTTATGTTTACCGCACCATTTTACAAAACCCCAAAAGCATTTTCTTTTACGGTCAGCGTTTGCATTTGTATGGAATATTTGTCTGAGGATGAGGATGTGTCTTTTCTCAAACGTTGTGGACCTAGACATGAGCTTACATCTCTTTGCCGAGAAAAGGAAGTTTTCCTTTCTATGGTCAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM-associated

Protein Analysis

940

Amino Acids

104.24

Weight (kDa)

5.81

Isoelectric Point (pI)

48.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
INTS4_C PF25458 816 - 936 3.5e-11 Integrator subunit 4 family C-terminal Ig-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1931
AccB1I GGYRCC 1 cut(s) 1457
AccBSI CCGCTC 4 cut(s) 270, 570, 671, 2398
AccI GTMKAC 3 cut(s) 296, 2503, 2595
AccII CGCG 7 cut(s) 17, 26, 186, 303, 615, 1664, 2087
AclI AACGTT 1 cut(s) 2752
AclWI GGATC 5 cut(s) 96, 202, 506, 519, 1620
AcoI YGGCCR 4 cut(s) 222, 431, 1473, 1850
AcsI RAATTY 4 cut(s) 974, 1765, 2063, 2196
AcuI CTGAAG 4 cut(s) 852, 1169, 1642, 1899
AcyI GRCGYC 2 cut(s) 1458, 1928
AfaI GTAC 9 cut(s) 987, 1015, 1074, 1233, 1860, 2110, 2215, 2236, 2376
AfiI CCNNNNNNNGG 3 cut(s) 2045, 2794, 2812
AgeI ACCGGT 1 cut(s) 387
AjnI CCWGG 5 cut(s) 219, 867, 1548, 1675, 2285
AjuI GAANNNNNNNTTGG 4 cut(s) 524, 556, 2665, 2697
Alw26I GTCTC 4 cut(s) 762, 1617, 1737, 2049
AlwI GGATC 5 cut(s) 96, 202, 506, 519, 1620
AlwNI CAGNNNCTG 1 cut(s) 603
AoxI GGCC 6 cut(s) 222, 431, 714, 1473, 1594, 1850
ApeKI GCWGC 8 cut(s) 536, 603, 659, 995, 1220, 1249, 2202, 2622
ApoI RAATTY 4 cut(s) 974, 1765, 2063, 2196
ArsI GACNNNNNNTTYG 4 cut(s) 377, 409, 2048, 2080
AsiGI ACCGGT 1 cut(s) 387
Asp700I GAANNNNTTC 2 cut(s) 837, 1558
AspLEI GCGC 6 cut(s) 19, 26, 364, 617, 1460, 1664
AspS9I GGNCC 6 cut(s) 10, 654, 1378, 1634, 2328, 2759
AsuC2I CCSGG 1 cut(s) 21
AsuHPI GGTGA 5 cut(s) 599, 632, 1012, 1849, 2023
AsuNHI GCTAGC 1 cut(s) 358
AvaII GGWCC 6 cut(s) 10, 654, 1378, 1634, 2328, 2759
BaeI ACNNNNGTAYC 2 cut(s) 419, 452
BalI TGGCCA 2 cut(s) 1475, 1852
BamHI GGATCC 1 cut(s) 511
BanI GGYRCC 1 cut(s) 1457
BbsI GAAGAC 2 cut(s) 247, 648
BbvI GCAGC 8 cut(s) 523, 590, 646, 982, 1207, 1236, 2189, 2609
BceAI ACGGC 3 cut(s) 418, 446, 661
BciT130I CCWGG 5 cut(s) 221, 869, 1550, 1677, 2287
BciVI GTATCC 2 cut(s) 528, 1523
BclI TGATCA 2 cut(s) 594, 2629
BcnI CCSGG 1 cut(s) 21
BcoDI GTCTC 4 cut(s) 762, 1617, 1737, 2049
BfoI RGCGCY 2 cut(s) 365, 1461
BfuI GTATCC 2 cut(s) 528, 1523
BglII AGATCT 2 cut(s) 1214, 2437
BmcAI AGTACT 2 cut(s) 1233, 2376
Bme1390I CCNGG 6 cut(s) 21, 221, 869, 1550, 1677, 2287
Bme18I GGWCC 6 cut(s) 10, 654, 1378, 1634, 2328, 2759
BmgT120I GGNCC 6 cut(s) 10, 654, 1378, 1634, 2328, 2759
BmiI GGNNCC 6 cut(s) 513, 1413, 1459, 1681, 1717, 2329
BmrFI CCNGG 6 cut(s) 21, 221, 869, 1550, 1677, 2287
BmsI GCATC 3 cut(s) 1132, 1952, 1959
BmtI GCTAGC 1 cut(s) 362
BoxI GACNNNNGTC 1 cut(s) 302
BpiI GAAGAC 2 cut(s) 247, 648
BpmI CTGGAG 2 cut(s) 966, 1065
BpuEI CTTGAG 4 cut(s) 188, 986, 2162, 2414
BpuMI CCSGG 1 cut(s) 21
BsaBI GATNNNNATC 1 cut(s) 516
BsaHI GRCGYC 2 cut(s) 1458, 1928
BsaJI CCNNGG 4 cut(s) 434, 808, 1549, 1751
BsaWI WCCGGW 1 cut(s) 387
BsaXI ACNNNNNCTCC 4 cut(s) 115, 145, 1403, 1433
Bsc4I CCNNNNNNNGG 3 cut(s) 2045, 2794, 2812
Bse118I RCCGGY 3 cut(s) 364, 387, 617
Bse1I ACTGG 3 cut(s) 924, 1415, 2382
Bse3DI GCAATG 3 cut(s) 1683, 1694, 1695
Bse8I GATNNNNATC 1 cut(s) 516
BseBI CCWGG 5 cut(s) 221, 869, 1550, 1677, 2287
BseDI CCNNGG 4 cut(s) 434, 808, 1549, 1751
BseJI GATNNNNATC 1 cut(s) 516
BseLI CCNNNNNNNGG 3 cut(s) 2045, 2794, 2812
BseMI GCAATG 3 cut(s) 1683, 1694, 1695
BseMII CTCAG 9 cut(s) 89, 193, 457, 914, 1415, 1494, 1900, 2600, 2715
BseNI ACTGG 3 cut(s) 924, 1415, 2382
BseRI GAGGAG 2 cut(s) 20, 272
BseX3I CGGCCG 1 cut(s) 431
BseXI GCAGC 8 cut(s) 523, 590, 646, 982, 1207, 1236, 2189, 2609
Bsh1236I CGCG 7 cut(s) 17, 26, 186, 303, 615, 1664, 2087
Bsh1285I CGRYCG 3 cut(s) 339, 388, 434
BshFI GGCC 6 cut(s) 224, 433, 716, 1475, 1596, 1852
BshNI GGYRCC 1 cut(s) 1457
BshTI ACCGGT 1 cut(s) 387
BsiEI CGRYCG 3 cut(s) 339, 388, 434
BsiSI CCGG 5 cut(s) 21, 365, 388, 422, 618
BslFI GGGAC 1 cut(s) 2341
BslI CCNNNNNNNGG 3 cut(s) 2045, 2794, 2812
BsmAI GTCTC 4 cut(s) 762, 1617, 1737, 2049
BsmFI GGGAC 1 cut(s) 2341
BsnI GGCC 6 cut(s) 224, 433, 716, 1475, 1596, 1852
Bsp1407I TGTACA 2 cut(s) 1858, 2234
Bsp68I TCGCGA 1 cut(s) 186
BspANI GGCC 6 cut(s) 224, 433, 716, 1475, 1596, 1852
BspCNI CTCAG 9 cut(s) 90, 192, 456, 913, 1414, 1493, 1899, 2599, 2716
BspFNI CGCG 7 cut(s) 17, 26, 186, 303, 615, 1664, 2087
BspHI TCATGA 2 cut(s) 1872, 1986
BspLI GGNNCC 6 cut(s) 513, 1413, 1459, 1681, 1717, 2329
BspOI GCTAGC 1 cut(s) 362
BspPI GGATC 5 cut(s) 96, 202, 506, 519, 1620
BspT107I GGYRCC 1 cut(s) 1457
BsrBI CCGCTC 4 cut(s) 270, 570, 671, 2398
BsrDI GCAATG 3 cut(s) 1683, 1694, 1695
BsrFI RCCGGY 3 cut(s) 364, 387, 617
BsrGI TGTACA 2 cut(s) 1858, 2234
BsrI ACTGG 3 cut(s) 924, 1415, 2382
BssAI RCCGGY 3 cut(s) 364, 387, 617
BssECI CCNNGG 4 cut(s) 434, 808, 1549, 1751
BssNAI GTATAC 1 cut(s) 2504
BssNI GRCGYC 2 cut(s) 1458, 1928
BssT1I CCWWGG 2 cut(s) 808, 1751
Bst1107I GTATAC 1 cut(s) 2504
Bst2UI CCWGG 5 cut(s) 221, 869, 1550, 1677, 2287
Bst4CI ACNGT 6 cut(s) 587, 1199, 1741, 1784, 2275, 2692
Bst6I CTCTTC 6 cut(s) 148, 1036, 2130, 2365, 2478, 2526
BstACI GRCGYC 2 cut(s) 1458, 1928
BstAUI TGTACA 2 cut(s) 1858, 2234
BstC8I GCNNGC 5 cut(s) 28, 360, 366, 703, 1998
BstDSI CCRYGG 1 cut(s) 434
BstFNI CGCG 7 cut(s) 17, 26, 186, 303, 615, 1664, 2087
BstH2I RGCGCY 2 cut(s) 365, 1461
BstHHI GCGC 6 cut(s) 19, 26, 364, 617, 1460, 1664
BstMAI GTCTC 4 cut(s) 762, 1617, 1737, 2049
BstMCI CGRYCG 3 cut(s) 339, 388, 434
BstNI CCWGG 5 cut(s) 221, 869, 1550, 1677, 2287
BstNSI RCATGY 3 cut(s) 1002, 1171, 2249
BstPAI GACNNNNGTC 1 cut(s) 302
BstSCI CCNGG 6 cut(s) 19, 219, 867, 1548, 1675, 2285
BstUI CGCG 7 cut(s) 17, 26, 186, 303, 615, 1664, 2087
BstV1I GCAGC 8 cut(s) 523, 590, 646, 982, 1207, 1236, 2189, 2609
BstV2I GAAGAC 2 cut(s) 247, 648
BstX2I RGATCY 6 cut(s) 101, 207, 511, 1214, 1625, 2437
BstYI RGATCY 6 cut(s) 101, 207, 511, 1214, 1625, 2437
BstZ17I GTATAC 1 cut(s) 2504
BstZI CGGCCG 1 cut(s) 431
BsuI GTATCC 2 cut(s) 528, 1523
BsuRI GGCC 6 cut(s) 224, 433, 716, 1475, 1596, 1852
BtgI CCRYGG 1 cut(s) 434
BtgZI GCGATG 1 cut(s) 2640
BtsIMutI CAGTG 2 cut(s) 908, 1422
BtuMI TCGCGA 1 cut(s) 186
Cac8I GCNNGC 5 cut(s) 28, 360, 366, 703, 1998
CaiI CAGNNNCTG 1 cut(s) 603
CciI TCATGA 2 cut(s) 1872, 1986
CfoI GCGC 6 cut(s) 19, 26, 364, 617, 1460, 1664
Cfr10I RCCGGY 3 cut(s) 364, 387, 617
Cfr13I GGNCC 6 cut(s) 10, 654, 1378, 1634, 2328, 2759
CseI GACGC 2 cut(s) 292, 2093
CsiI ACCWGGT 1 cut(s) 1675
Csp6I GTAC 9 cut(s) 986, 1014, 1073, 1232, 1859, 2109, 2214, 2235, 2375
CspAI ACCGGT 1 cut(s) 387
CspCI CAANNNNNGTGG 2 cut(s) 2737, 2772
CviQI GTAC 9 cut(s) 986, 1014, 1073, 1232, 1859, 2109, 2214, 2235, 2375
DinI GGCGCC 1 cut(s) 1459
EaeI YGGCCR 4 cut(s) 222, 431, 1473, 1850
EagI CGGCCG 1 cut(s) 431
Eam1104I CTCTTC 6 cut(s) 148, 1036, 2130, 2365, 2478, 2526
EarI CTCTTC 6 cut(s) 148, 1036, 2130, 2365, 2478, 2526
EciI GGCGGA 1 cut(s) 235
EclXI CGGCCG 1 cut(s) 431
Eco130I CCWWGG 2 cut(s) 808, 1751
Eco32I GATATC 1 cut(s) 1846
Eco47I GGWCC 6 cut(s) 10, 654, 1378, 1634, 2328, 2759
Eco52I CGGCCG 1 cut(s) 431
Eco57I CTGAAG 4 cut(s) 852, 1169, 1642, 1899
EcoO109I RGGNCCY 1 cut(s) 2328
EcoRI GAATTC 1 cut(s) 974
EcoRII CCWGG 5 cut(s) 219, 867, 1548, 1675, 2285
EcoRV GATATC 1 cut(s) 1846
EcoT14I CCWWGG 2 cut(s) 808, 1751
EcoT22I ATGCAT 3 cut(s) 960, 1125, 1173
EgeI GGCGCC 1 cut(s) 1459
EheI GGCGCC 1 cut(s) 1459
ErhI CCWWGG 2 cut(s) 808, 1751
FalI AAGNNNNNCTT 6 cut(s) 825, 857, 1421, 1453, 2790, 2822
FaqI GGGAC 1 cut(s) 2341
FauI CCCGC 2 cut(s) 142, 2039
FauNDI CATATG 2 cut(s) 1173, 1639
FbaI TGATCA 2 cut(s) 594, 2629
FblI GTMKAC 3 cut(s) 296, 2503, 2595
GlaI GCGC 6 cut(s) 18, 25, 363, 616, 1459, 1663
GsuI CTGGAG 2 cut(s) 966, 1065
HaeII RGCGCY 2 cut(s) 365, 1461
HaeIII GGCC 6 cut(s) 224, 433, 716, 1475, 1596, 1852
HapII CCGG 5 cut(s) 21, 365, 388, 422, 618
HgaI GACGC 2 cut(s) 292, 2093
HhaI GCGC 6 cut(s) 19, 26, 364, 617, 1460, 1664
Hin1I GRCGYC 2 cut(s) 1458, 1928
Hin6I GCGC 6 cut(s) 17, 24, 362, 615, 1458, 1662
HinP1I GCGC 6 cut(s) 17, 24, 362, 615, 1458, 1662
HincII GTYRAC 3 cut(s) 115, 297, 1195
HindII GTYRAC 3 cut(s) 115, 297, 1195
HindIII AAGCTT 3 cut(s) 795, 1107, 2180
HpaII CCGG 5 cut(s) 21, 365, 388, 422, 618
HphI GGTGA 5 cut(s) 599, 632, 1012, 1849, 2023
Hpy99I CGWCG 3 cut(s) 308, 386, 587
HpyAV CCTTC 9 cut(s) 426, 502, 1144, 1548, 1834, 1874, 2034, 2045, 2049
HpyCH4III ACNGT 6 cut(s) 587, 1199, 1741, 1784, 2275, 2692
HpyCH4IV ACGT 5 cut(s) 1446, 1501, 1928, 2111, 2752
HpySE526I ACGT 5 cut(s) 1446, 1501, 1928, 2111, 2752
Hsp92I GRCGYC 2 cut(s) 1458, 1928
HspAI GCGC 6 cut(s) 17, 24, 362, 615, 1458, 1662
KasI GGCGCC 1 cut(s) 1457
KroI GCCGGC 1 cut(s) 364
KroNI GCCGGC 1 cut(s) 366
Ksp22I TGATCA 2 cut(s) 594, 2629
LmnI GCTCC 6 cut(s) 275, 285, 947, 1411, 1489, 2152
Lsp1109I GCAGC 8 cut(s) 523, 590, 646, 982, 1207, 1236, 2189, 2609
LweI GCATC 3 cut(s) 1132, 1952, 1959
MabI ACCWGGT 1 cut(s) 1675
MaeII ACGT 5 cut(s) 1446, 1501, 1928, 2111, 2752
MaeIII GTNAC 7 cut(s) 315, 1101, 1540, 1574, 1671, 1804, 2164
MbiI CCGCTC 4 cut(s) 270, 570, 671, 2398
MflI RGATCY 6 cut(s) 101, 207, 511, 1214, 1625, 2437
MlsI TGGCCA 2 cut(s) 1475, 1852
MluNI TGGCCA 2 cut(s) 1475, 1852
Mly113I GGCGCC 1 cut(s) 1458
MlyI GAGTC 7 cut(s) 269, 292, 302, 323, 543, 1079, 1878
MmeI TCCRAC 4 cut(s) 199, 240, 297, 1760
Mox20I TGGCCA 2 cut(s) 1475, 1852
Mph1103I ATGCAT 3 cut(s) 960, 1125, 1173
MroNI GCCGGC 1 cut(s) 364
MroXI GAANNNNTTC 2 cut(s) 837, 1558
MscI TGGCCA 2 cut(s) 1475, 1852
MseI TTAA 5 cut(s) 689, 1236, 1334, 1743, 1895
MslI CAYNNNNRTG 5 cut(s) 776, 1172, 1590, 1688, 2708
Msp20I TGGCCA 2 cut(s) 1475, 1852
MspA1I CMGCKG 1 cut(s) 659
MspI CCGG 5 cut(s) 21, 365, 388, 422, 618
MspR9I CCNGG 6 cut(s) 21, 221, 869, 1550, 1677, 2287
MvaI CCWGG 5 cut(s) 221, 869, 1550, 1677, 2287
MvnI CGCG 7 cut(s) 17, 26, 186, 303, 615, 1664, 2087
NaeI GCCGGC 1 cut(s) 366
NarI GGCGCC 1 cut(s) 1458
NciI CCSGG 1 cut(s) 21
NdeI CATATG 2 cut(s) 1173, 1639
NgoMIV GCCGGC 1 cut(s) 364
NheI GCTAGC 1 cut(s) 358
NlaIV GGNNCC 6 cut(s) 513, 1413, 1459, 1681, 1717, 2329
NmeAIII GCCGAG 3 cut(s) 337, 478, 2813
NmuCI GTSAC 4 cut(s) 315, 1574, 1804, 2164
NruI TCGCGA 1 cut(s) 186
NsiI ATGCAT 3 cut(s) 960, 1125, 1173
NspI RCATGY 3 cut(s) 1002, 1171, 2249
PagI TCATGA 2 cut(s) 1872, 1986
PcsI WCGNNNNNNNCGW 1 cut(s) 512
PdiI GCCGGC 1 cut(s) 366
PdmI GAANNNNTTC 2 cut(s) 837, 1558
PfeI GAWTC 5 cut(s) 349, 707, 1869, 2252, 2603
PflFI GACNNNGTC 1 cut(s) 1810
PinAI ACCGGT 1 cut(s) 387
Ple19I CGATCG 1 cut(s) 339
PleI GAGTC 7 cut(s) 269, 292, 301, 322, 543, 1079, 1878
PluTI GGCGCC 1 cut(s) 1461
PpsI GAGTC 7 cut(s) 269, 292, 301, 322, 543, 1079, 1878
PpuMI RGGWCCY 1 cut(s) 2328
PshAI GACNNNNGTC 1 cut(s) 302
Psp1406I AACGTT 1 cut(s) 2752
Psp5II RGGWCCY 1 cut(s) 2328
Psp6I CCWGG 5 cut(s) 219, 867, 1548, 1675, 2285
PspGI CCWGG 5 cut(s) 219, 867, 1548, 1675, 2285
PspN4I GGNNCC 6 cut(s) 513, 1413, 1459, 1681, 1717, 2329
PspPI GGNCC 6 cut(s) 10, 654, 1378, 1634, 2328, 2759
PspPPI RGGWCCY 1 cut(s) 2328
PstNI CAGNNNCTG 1 cut(s) 603
PsuI RGATCY 6 cut(s) 101, 207, 511, 1214, 1625, 2437
PsyI GACNNNGTC 1 cut(s) 1810
PvuI CGATCG 1 cut(s) 339
RruI TCGCGA 1 cut(s) 186
RsaI GTAC 9 cut(s) 987, 1015, 1074, 1233, 1860, 2110, 2215, 2236, 2376
RsaNI GTAC 9 cut(s) 986, 1014, 1073, 1232, 1859, 2109, 2214, 2235, 2375
RseI CAYNNNNRTG 5 cut(s) 776, 1172, 1590, 1688, 2708
SalI GTCGAC 1 cut(s) 295
SaqAI TTAA 5 cut(s) 689, 1236, 1334, 1743, 1895
Sau96I GGNCC 6 cut(s) 10, 654, 1378, 1634, 2328, 2759
ScaI AGTACT 2 cut(s) 1233, 2376
SchI GAGTC 7 cut(s) 269, 292, 302, 323, 543, 1079, 1878
ScrFI CCNGG 6 cut(s) 21, 221, 869, 1550, 1677, 2287
SexAI ACCWGGT 1 cut(s) 1675
SfaNI GCATC 3 cut(s) 1132, 1952, 1959
SfoI GGCGCC 1 cut(s) 1459
SgrAI CRCCGGYG 1 cut(s) 617
SinI GGWCC 6 cut(s) 10, 654, 1378, 1634, 2328, 2759
SmiMI CAYNNNNRTG 5 cut(s) 776, 1172, 1590, 1688, 2708
SmlI CTYRAG 4 cut(s) 203, 965, 2177, 2393
SmoI CTYRAG 4 cut(s) 203, 965, 2177, 2393
SspDI GGCGCC 1 cut(s) 1457
SspI AATATT 1 cut(s) 2717
StyD4I CCNGG 6 cut(s) 19, 219, 867, 1548, 1675, 2285
StyI CCWWGG 2 cut(s) 808, 1751
TaaI ACNGT 6 cut(s) 587, 1199, 1741, 1784, 2275, 2692
TaiI ACGT 5 cut(s) 1449, 1504, 1931, 2114, 2755
TaqI TCGA 8 cut(s) 153, 296, 321, 335, 352, 381, 667, 758
TatI WGTACW 5 cut(s) 1072, 1231, 1858, 2234, 2374
TauI GCSGC 4 cut(s) 227, 311, 573, 2401
TfiI GAWTC 5 cut(s) 349, 707, 1869, 2252, 2603
Tru1I TTAA 5 cut(s) 689, 1236, 1334, 1743, 1895
Tru9I TTAA 5 cut(s) 689, 1236, 1334, 1743, 1895
TscAI CASTG 2 cut(s) 908, 1422
TseFI GTSAC 4 cut(s) 315, 1574, 1804, 2164
TseI GCWGC 8 cut(s) 536, 603, 659, 995, 1220, 1249, 2202, 2622
Tsp45I GTSAC 4 cut(s) 315, 1574, 1804, 2164
TspGWI ACGGA 2 cut(s) 253, 504
TspRI CASTG 2 cut(s) 908, 1422
Tth111I GACNNNGTC 1 cut(s) 1810
VpaK11BI GGWCC 6 cut(s) 10, 654, 1378, 1634, 2328, 2759
XapI RAATTY 4 cut(s) 974, 1765, 2063, 2196
XbaI TCTAGA 1 cut(s) 1786
XceI RCATGY 3 cut(s) 1002, 1171, 2249
XmiI GTMKAC 3 cut(s) 296, 2503, 2595
XmnI GAANNNNTTC 2 cut(s) 837, 1558
ZraI GACGTC 1 cut(s) 1929
ZrmI AGTACT 2 cut(s) 1233, 2376
Zsp2I ATGCAT 3 cut(s) 960, 1125, 1173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.