Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0001914

Physical Location & Seq

Genomic Coordinates Forward (+)

23448131 .. 23453601

Gene Structure 5471 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0249200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGAAGGAGGTTGACAAAAGGAAAACTACTAATACTAAAACCACCAAGCGCTCCGGAAGAACTGAAAGGAGAGACCATAAGCTGAACCAAGGGAATACTGGCAAGACTCTGAATGGAAAAGGAACTGAATCTAAAGAGTCTCATGCTAGAACAGGCCCCGGTACTTTAGTAAGTGATTTAAACATGGGTACAGAGGCCTCGGAAGTTAATGAAAATGTGGTCATACATTATGTGGATGATGTGAAAAAGTTTGTGGAGGCGCCTCATGATTTAAAAGCCAACCCAATGATTTCCATAGAGAACAATGATGAAGATTCAGATGGTCATTCTAGTGATTTGGAAAAAGAAACAAAGCAGGGGAAAGAAGAGGCGTCAGATTGTGAGACCATAAAGGATTCAGTATCATCTCAAGGAGAATCGACTACCTCTGCGGATGACATAGTAGAAAGCCCTCCAAGGGTTCCCAAAATTATTGGAAGAAAAGATTCCTCAGAGAGCTCTCATGGATCCAGGGAGAGATCTGGTCATGAATCTAGTAACTCAAAATCCAAGGATCACACTCGCAAACAATCCACTACAATACACAAAGGGCCTTCTAGGAATGATTCTAGCAATATGGAAATTCCCATAAAACCTTCATCAGAATCATCTGAGGAGGTTGATGACAAGGCTGTCAAAGAAATAGAAGGAAGTGATATTGTTGATAGGTCTTCAAATGGTGCCCAGAGTATTCAAAGTGACAATCAAACGATAGATGCAGAAGAAATTGATGAACAAGAGGATGTTACAGCTTTGGAACAGAAGGTTGAAGAAATGGAAATGAGAATTCAGAAACTTGAAGAAGAACTGCGAGAAGTTGCTGCTCTTGAAATTTCCCTATATTCTGTGGTACCGGAGCATGGGAGCTCCGCACATAAAGTGCACACACCAGCCCGGCGCATTTCTCGACTTTATATTCATGCTTGCAAGCATTGGACTCAGGACAAGCGAGCCACAATTGCTAAGAACACTGTATCAGGGCTTGTTCTAATTGCAAAGTCCTGTGGTAATGATGTTGCCAGGTTGACCTTCTGGTTATCCAATACTGTTGTGCTTAGGGAGATCATATCTCAAGCATTTGGCAGTTCACGTCACTCGAGTCCTTTTTCTAAGTTTGAAACTAATGGAACTAGCACGAGAAGTGATGTGAAGTCTGCAGCACTGAGATGGAGGGGTAGTTCTGGTAGTAAACAAATGAATGGCCTCATGCAGTTTGCCGATGACTGGCAAGAGACAGGAACCTTCACAGCGGCATTAGAAAGAGTTGAATCCTGGATTTTTACTCGGCTAGTTGAGTCCGTGTGGTGGCAGGCTTTGGCTCCGCATATGCAATCTCCAGTCGAGTATTCATCAAATAATAAGATAGCAAGGTTCTTGGGACCTGCCCTCGGTGATCAGAACCAAGGCAGCTTTTCTGTTAACCTGTGGAAAAATGCTTTCCAGGATGCTTCTCAACGACTCTGTCCTGTTCGAGCCGGGGGACACCAGTGTGGCTGCTTGCCTGTGTTGGCGAGAATGGTCATGGGGCAATGTGTTGCCAGGCTAGATGTTGCAATGTTCAATGCGATTCTGCGTGAGTCAGTACATGAGATTCCTACTGATCCAGTGTCAGATCCCATTCTTGATTCCCGGGTTCTACCTATTCCTGCTGGTGATTTGAGTTTTGGATCTGGCGCACAACTAAAGAATTCTGTTGGAAATTGGTCTAGATGGCTAAGTGATATGTTTGGCATGGATGCTGATGATTCTCTGCCCGGAAGTGAGGACAATGACAAGCAGAGTGGAGATGGTGAACCAAAATCCTTCCTTCTTCTCAATGCCTTGAGTGATCTTCTGATGCTTCCAAAAGACATGCTTATGGACCGCTCAATCAGAAAGGAGGTTTGCCCATCAATTAGTCTTCCATTAGTTAAGCGAATACTTTGTAACTTCACTCCAGATGAGTTCTGTCCAGATGCTGTTCCAGGAGCTGTATTAGAGGCACTGAATGCTGAGAGTATTGTGGAGCGGAGATTGTCCGGAGAATCAGCGAGAAGCTTCCCTTATACAGCTGCACCAGTTGTGTACAACCCTCCTTCCTCAGTTGACGTGTCAGAGAAAGTTTCAGAAGTAGGAGAGAGATCTCCATTGGAAAGGAATGTGTCGGCTGTACAAAGAAAGGGATATTTAAGTGATGAGGAGCTAGAGGAGCTGGACTCCCCTCTTACAGCCATCATTGACAAATTACCATCATCTCCAGCTTTCATAACAAATGGAAACGGAAATGGAAAACATGAAGAAACAGGTCATGCCTGCATGAATGCAAGGTATGATCTCCTTCGTGAGGTCTGGTCTGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0005744 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006996 GO:0007005 GO:0008104 GO:0008150 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0017038 GO:0019866 GO:0030150 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031304 GO:0031305 GO:0031966 GO:0031967 GO:0031975 GO:0032592 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0044743 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0065002 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072655 GO:0098573 GO:0098796 GO:0098798 GO:0098800 GO:1990542

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Tim17

Protein Analysis

792

Amino Acids

87.1

Weight (kDa)

5.26

Isoelectric Point (pI)

52.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001914)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20350 AT2G37410 AT2G37410
fragaria_vesca	FvH4_1g06160 FvH4_1g06160 FvH4_1g06160 FvH4_3g20950 FvH4_6g21710 FvH4_6g25200 FvH4_6g30630 FvH4_7g25780
malus_domestica	MD02G1065800.v1.1 MD15G1196700.v1.1
prunus_persica	Prupe.4G283200_v2.0.a1 Prupe.5G013800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0091921 RchiOBHm_Chr2g0091931 RchiOBHm_Chr2g0091941 RchiOBHm_Chr3g0491401
rosa_laevigata	RLG00000016261 RLG00000022844 RLG00000033645
rosa_multiflora	Rmu_co8243085.1_g000001 Rmu_sc0006034.1_g000002 Rmu_sc0031557.1_g000001
rosa_roxburghii	Rroxscaffold_2G00149600 Rroxscaffold_2G00149610
rosa_rugosa	Rorug01G0286100 Rorug02G0021700 Rorug03G0249200
rosa_samantha	Rh2AG067300 Rh2BG066500 Rh2BG066600 Rh2CG067800 Rh2CG067900 Rh2DG066400 Rh3BG334400 Rh3CG331400 Rh3DG332900 Rh4BG045200 Rh6AG042000 Rh6DG310700 Rh7BG337600 Rh7BG370600
rosa_wichuraiana	Rw2G005370 Rw3G026340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	671
Acc36I	ACCTGC	1 cut(s)	1429
Acc65I	GGTACC	1 cut(s)	889
AccB1I	GGYRCC	3 cut(s)	259, 719, 889
AccBSI	CCGCTC	2 cut(s)	1905, 2047
AccIII	TCCGGA	2 cut(s)	53, 2057
AciI	CCGC	6 cut(s)	431, 909, 1289, 1361, 1903, 2047
AclWI	GGATC	6 cut(s)	501, 514, 561, 1634, 1646, 1714
AcsI	RAATTY	4 cut(s)	621, 825, 870, 1726
AcyI	GRCGYC	2 cut(s)	260, 371
AfaI	GTAC	6 cut(s)	163, 190, 891, 1623, 2105, 2190
AfeI	AGCGCT	1 cut(s)	50
AfiI	CCNNNNNNNGG	6 cut(s)	457, 899, 1263, 1344, 1427, 2362
AflIII	ACRYGT	1 cut(s)	2127
AgsI	TTSAA	8 cut(s)	714, 734, 809, 839, 869, 1157, 1307, 1600
AjiI	CACGTC	2 cut(s)	1130, 2128
AjnI	CCWGG	6 cut(s)	509, 1058, 1310, 1479, 1577, 2002
AleI	CACNNNNGTG	1 cut(s)	1527
AloI	GAACNNNNNNTCC	2 cut(s)	1201, 1233
Alw21I	GWGCWC	3 cut(s)	500, 908, 924
Alw26I	GTCTC	4 cut(s)	66, 144, 377, 1265
Alw44I	GTGCAC	1 cut(s)	920
AlwI	GGATC	6 cut(s)	501, 514, 561, 1634, 1646, 1714
AlwNI	CAGNNNCTG	2 cut(s)	1997, 2009
Ama87I	CYCGRG	2 cut(s)	1135, 1668
Aor13HI	TCCGGA	2 cut(s)	53, 2057
Aor51HI	AGCGCT	1 cut(s)	50
AoxI	GGCC	4 cut(s)	154, 195, 590, 1240
ApaLI	GTGCAC	1 cut(s)	920
ApeKI	GCWGC	5 cut(s)	860, 1196, 1446, 1533, 2090
ApoI	RAATTY	4 cut(s)	621, 825, 870, 1726
Asp700I	GAANNNNTTC	1 cut(s)	484
Asp718I	GGTACC	1 cut(s)	889
AspLEI	GCGC	4 cut(s)	51, 262, 939, 1715
AspS9I	GGNCC	4 cut(s)	155, 590, 1418, 1900
AsuC2I	CCSGG	6 cut(s)	159, 934, 1516, 1669, 1670, 1794
AsuHPI	GGTGA	3 cut(s)	1442, 1703, 1841
AvaI	CYCGRG	2 cut(s)	1135, 1668
AvaII	GGWCC	2 cut(s)	1418, 1900
BaeGI	GKGCMC	2 cut(s)	724, 924
BaeI	ACNNNNGTAYC	2 cut(s)	153, 186
BamHI	GGATCC	1 cut(s)	506
BanI	GGYRCC	3 cut(s)	259, 719, 889
BanII	GRGCYC	2 cut(s)	500, 908
BauI	CACGAG	1 cut(s)	1174
BbsI	GAAGAC	2 cut(s)	702, 1931
Bbv12I	GWGCWC	3 cut(s)	500, 908, 924
BbvI	GCAGC	5 cut(s)	847, 1208, 1458, 1520, 2077
BccI	CCATC	7 cut(s)	314, 1200, 1743, 1820, 1936, 2258, 2275
BciT130I	CCWGG	6 cut(s)	511, 1060, 1312, 1481, 1579, 2004
BclI	TGATCA	1 cut(s)	1432
BcnI	CCSGG	6 cut(s)	159, 934, 1516, 1669, 1670, 1794
BcoDI	GTCTC	4 cut(s)	66, 144, 377, 1265
BfmI	CTRYAG	1 cut(s)	1194
BfoI	RGCGCY	2 cut(s)	52, 263
BfuAI	ACCTGC	1 cut(s)	1429
BglII	AGATCT	2 cut(s)	518, 2159
BisI	GCNGC	6 cut(s)	861, 1197, 1290, 1447, 1534, 2091
BlsI	GCNGC	6 cut(s)	862, 1198, 1291, 1448, 1535, 2092
Bme18I	GGWCC	2 cut(s)	1418, 1900
BmeT110I	CYCGRG	2 cut(s)	1135, 1668
BmgBI	CACGTC	2 cut(s)	1130, 2128
BmgT120I	GGNCC	4 cut(s)	155, 590, 1418, 1900
BmiI	GGNNCC	9 cut(s)	157, 261, 462, 508, 721, 891, 1279, 1359, 1419
BmsI	GCATC	5 cut(s)	745, 1474, 1765, 1866, 1984
BpiI	GAAGAC	2 cut(s)	702, 1931
BplI	GAGNNNNNCTC	2 cut(s)	2219, 2251
BpmI	CTGGAG	3 cut(s)	1359, 1959, 2259
Bpu10I	CCTNAGC	1 cut(s)	1094
BpuEI	CTTGAG	3 cut(s)	393, 1095, 1882
BpuMI	CCSGG	6 cut(s)	159, 934, 1516, 1669, 1670, 1794
BsaHI	GRCGYC	2 cut(s)	260, 371
BsaI	GGTCTC	2 cut(s)	66, 377
BsaWI	WCCGGW	3 cut(s)	53, 892, 2057
BsaXI	ACNNNNNCTCC	2 cut(s)	1201, 1231
Bsc4I	CCNNNNNNNGG	6 cut(s)	457, 899, 1263, 1344, 1427, 2362
Bse1I	ACTGG	6 cut(s)	103, 1268, 1376, 1525, 1643, 2096
Bse3DI	GCAATG	2 cut(s)	1574, 1599
BseAI	TCCGGA	2 cut(s)	53, 2057
BseBI	CCWGG	6 cut(s)	511, 1060, 1312, 1481, 1579, 2004
BseGI	GGATG	5 cut(s)	241, 439, 787, 1489, 1780
BseLI	CCNNNNNNNGG	6 cut(s)	457, 899, 1263, 1344, 1427, 2362
BseMI	GCAATG	2 cut(s)	1574, 1599
BseMII	CTCAG	6 cut(s)	504, 642, 992, 1193, 2022, 2133
BseNI	ACTGG	6 cut(s)	103, 1268, 1376, 1525, 1643, 2096
BseRI	GAGGAG	3 cut(s)	668, 2231, 2240
BseSI	GKGCMC	2 cut(s)	724, 924
BseXI	GCAGC	5 cut(s)	847, 1208, 1458, 1520, 2077
BsgI	GTGCAG	1 cut(s)	2076
BshFI	GGCC	4 cut(s)	156, 197, 592, 1242
BshNI	GGYRCC	3 cut(s)	259, 719, 889
BsiHKAI	GWGCWC	3 cut(s)	500, 908, 924
BsiHKCI	CYCGRG	2 cut(s)	1135, 1668
BsiSI	CCGG	8 cut(s)	54, 159, 893, 934, 1515, 1669, 1794, 2058
BslFI	GGGAC	2 cut(s)	1431, 1533
BslI	CCNNNNNNNGG	6 cut(s)	457, 899, 1263, 1344, 1427, 2362
BsmAI	GTCTC	4 cut(s)	66, 144, 377, 1265
BsmFI	GGGAC	2 cut(s)	1431, 1533
BsmI	GAATGC	2 cut(s)	2032, 2344
BsnI	GGCC	4 cut(s)	156, 197, 592, 1242
Bso31I	GGTCTC	2 cut(s)	66, 377
BsoBI	CYCGRG	2 cut(s)	1135, 1668
Bsp1286I	GDGCHC	4 cut(s)	500, 724, 908, 924
Bsp13I	TCCGGA	2 cut(s)	53, 2057
Bsp1407I	TGTACA	2 cut(s)	2103, 2188
BspACI	CCGC	6 cut(s)	431, 909, 1289, 1361, 1903, 2047
BspANI	GGCC	4 cut(s)	156, 197, 592, 1242
BspCNI	CTCAG	6 cut(s)	503, 643, 991, 1194, 2023, 2132
BspEI	TCCGGA	2 cut(s)	53, 2057
BspHI	TCATGA	2 cut(s)	265, 526
BspLI	GGNNCC	9 cut(s)	157, 261, 462, 508, 721, 891, 1279, 1359, 1419
BspMAI	CTGCAG	1 cut(s)	1198
BspMI	ACCTGC	1 cut(s)	1429
BspPI	GGATC	6 cut(s)	501, 514, 561, 1634, 1646, 1714
BspT107I	GGYRCC	3 cut(s)	259, 719, 889
BspTNI	GGTCTC	2 cut(s)	66, 377
BsrBI	CCGCTC	2 cut(s)	1905, 2047
BsrDI	GCAATG	2 cut(s)	1574, 1599
BsrGI	TGTACA	2 cut(s)	2103, 2188
BsrI	ACTGG	6 cut(s)	103, 1268, 1376, 1525, 1643, 2096
BssNI	GRCGYC	2 cut(s)	260, 371
BssSI	CACGAG	1 cut(s)	1174
BssT1I	CCWWGG	4 cut(s)	88, 455, 549, 1441
Bst2BI	CACGAG	1 cut(s)	1174
Bst2UI	CCWGG	6 cut(s)	511, 1060, 1312, 1481, 1579, 2004
Bst4CI	ACNGT	2 cut(s)	1012, 1087
Bst6I	CTCTTC	1 cut(s)	360
BstACI	GRCGYC	2 cut(s)	260, 371
BstAPI	GCANNNNNTGC	1 cut(s)	2027
BstAUI	TGTACA	2 cut(s)	2103, 2188
BstC8I	GCNNGC	6 cut(s)	964, 968, 990, 1350, 1538, 2332
BstENI	CCTNNNNNAGG	1 cut(s)	2360
BstF5I	GGATG	5 cut(s)	241, 439, 787, 1489, 1780
BstH2I	RGCGCY	2 cut(s)	52, 263
BstHHI	GCGC	4 cut(s)	51, 262, 939, 1715
BstMAI	GTCTC	4 cut(s)	66, 144, 377, 1265
BstMWI	GCNNNNNNNGC	3 cut(s)	998, 2027, 2227
BstNI	CCWGG	6 cut(s)	511, 1060, 1312, 1481, 1579, 2004
BstNSI	RCATGY	1 cut(s)	1894
BstSFI	CTRYAG	1 cut(s)	1194
BstSLI	GKGCMC	2 cut(s)	724, 924
BstV1I	GCAGC	5 cut(s)	847, 1208, 1458, 1520, 2077
BstV2I	GAAGAC	2 cut(s)	702, 1931
BstX2I	RGATCY	5 cut(s)	506, 518, 1651, 1706, 2159
BstYI	RGATCY	5 cut(s)	506, 518, 1651, 1706, 2159
BsuRI	GGCC	4 cut(s)	156, 197, 592, 1242
BtrI	CACGTC	2 cut(s)	1130, 2128
BtsCI	GGATG	5 cut(s)	241, 439, 787, 1489, 1780
BtsIMutI	CAGTG	5 cut(s)	1008, 1199, 1532, 1650, 2021
BveI	ACCTGC	1 cut(s)	1429
Cac8I	GCNNGC	6 cut(s)	964, 968, 990, 1350, 1538, 2332
CaiI	CAGNNNCTG	2 cut(s)	1997, 2009
CciI	TCATGA	2 cut(s)	265, 526
CfoI	GCGC	4 cut(s)	51, 262, 939, 1715
Cfr13I	GGNCC	4 cut(s)	155, 590, 1418, 1900
Cfr9I	CCCGGG	1 cut(s)	1668
CseI	GACGC	1 cut(s)	360
Csp6I	GTAC	6 cut(s)	162, 189, 890, 1622, 2104, 2189
CspCI	CAANNNNNGTGG	2 cut(s)	1801, 1836
CviQI	GTAC	6 cut(s)	162, 189, 890, 1622, 2104, 2189
DinI	GGCGCC	1 cut(s)	261
DraI	TTTAAA	2 cut(s)	180, 273
DrdI	GACNNNNNNGTC	1 cut(s)	671
DseDI	GACNNNNNNGTC	1 cut(s)	671
Eam1104I	CTCTTC	1 cut(s)	360
EarI	CTCTTC	1 cut(s)	360
Ecl136II	GAGCTC	2 cut(s)	498, 906
Eco130I	CCWWGG	4 cut(s)	88, 455, 549, 1441
Eco147I	AGGCCT	1 cut(s)	197
Eco24I	GRGCYC	2 cut(s)	500, 908
Eco31I	GGTCTC	2 cut(s)	66, 377
Eco47I	GGWCC	2 cut(s)	1418, 1900
Eco47III	AGCGCT	1 cut(s)	50
Eco53kI	GAGCTC	2 cut(s)	498, 906
Eco88I	CYCGRG	2 cut(s)	1135, 1668
EcoICRI	GAGCTC	2 cut(s)	498, 906
EcoNI	CCTNNNNNAGG	1 cut(s)	2360
EcoO109I	RGGNCCY	3 cut(s)	155, 590, 1418
EcoRI	GAATTC	2 cut(s)	825, 1726
EcoRII	CCWGG	6 cut(s)	509, 1058, 1310, 1479, 1577, 2002
EcoT14I	CCWWGG	4 cut(s)	88, 455, 549, 1441
EcoT38I	GRGCYC	2 cut(s)	500, 908
EgeI	GGCGCC	1 cut(s)	261
EheI	GGCGCC	1 cut(s)	261
ErhI	CCWWGG	4 cut(s)	88, 455, 549, 1441
FalI	AAGNNNNNCTT	4 cut(s)	1878, 1910, 2065, 2097
FaqI	GGGAC	2 cut(s)	1431, 1533
FauNDI	CATATG	1 cut(s)	1365
FbaI	TGATCA	1 cut(s)	1432
Fnu4HI	GCNGC	6 cut(s)	861, 1197, 1290, 1447, 1534, 2091
FokI	GGATG	5 cut(s)	248, 446, 794, 1496, 1787
FriOI	GRGCYC	2 cut(s)	500, 908
Fsp4HI	GCNGC	6 cut(s)	861, 1197, 1290, 1447, 1534, 2091
GlaI	GCGC	4 cut(s)	50, 261, 938, 1714
GluI	GCNGC	6 cut(s)	861, 1197, 1290, 1447, 1534, 2091
GsuI	CTGGAG	3 cut(s)	1359, 1959, 2259
HaeII	RGCGCY	2 cut(s)	52, 263
HaeIII	GGCC	4 cut(s)	156, 197, 592, 1242
HapII	CCGG	8 cut(s)	54, 159, 893, 934, 1515, 1669, 1794, 2058
HgaI	GACGC	1 cut(s)	360
HhaI	GCGC	4 cut(s)	51, 262, 939, 1715
Hin1I	GRCGYC	2 cut(s)	260, 371
Hin6I	GCGC	4 cut(s)	49, 260, 937, 1713
HinP1I	GCGC	4 cut(s)	49, 260, 937, 1713
HincII	GTYRAC	4 cut(s)	13, 1065, 1459, 2125
HindII	GTYRAC	4 cut(s)	13, 1065, 1459, 2125
HindIII	AAGCTT	1 cut(s)	2074
HpaI	GTTAAC	1 cut(s)	1459
HpaII	CCGG	8 cut(s)	54, 159, 893, 934, 1515, 1669, 1794, 2058
HphI	GGTGA	3 cut(s)	1442, 1703, 1841
Hpy166II	GTNNAC	9 cut(s)	13, 922, 1065, 1127, 1229, 1459, 1832, 2104, 2125
Hpy8I	GTNNAC	9 cut(s)	13, 922, 1065, 1127, 1229, 1459, 1832, 2104, 2125
HpyCH4III	ACNGT	2 cut(s)	1012, 1087
HpyCH4IV	ACGT	2 cut(s)	1129, 2127
HpyF10VI	GCNNNNNNNGC	3 cut(s)	998, 2027, 2227
HpySE526I	ACGT	2 cut(s)	1129, 2127
Hsp92I	GRCGYC	2 cut(s)	260, 371
HspAI	GCGC	4 cut(s)	49, 260, 937, 1713
KasI	GGCGCC	1 cut(s)	259
Kpn2I	TCCGGA	2 cut(s)	53, 2057
KpnI	GGTACC	1 cut(s)	893
Ksp22I	TGATCA	1 cut(s)	1432
KspAI	GTTAAC	1 cut(s)	1459
LmnI	GCTCC	9 cut(s)	56, 895, 903, 911, 1363, 2006, 2044, 2218, 2227
Lsp1109I	GCAGC	5 cut(s)	847, 1208, 1458, 1520, 2077
LweI	GCATC	5 cut(s)	745, 1474, 1765, 1866, 1984
MaeII	ACGT	2 cut(s)	1129, 2127
MaeIII	GTNAC	5 cut(s)	536, 737, 784, 1130, 1964
MbiI	CCGCTC	2 cut(s)	1905, 2047
MfeI	CAATTG	1 cut(s)	996
MflI	RGATCY	5 cut(s)	506, 518, 1651, 1706, 2159
MhlI	GDGCHC	4 cut(s)	500, 724, 908, 924
Mly113I	GGCGCC	1 cut(s)	260
MlyI	GAGTC	8 cut(s)	100, 146, 970, 1147, 1343, 1491, 1625, 2228
MmeI	TCCRAC	1 cut(s)	1714
MroI	TCCGGA	2 cut(s)	53, 2057
MroXI	GAANNNNTTC	1 cut(s)	484
MseI	TTAA	6 cut(s)	179, 207, 272, 1458, 1950, 2207
MslI	CAYNNNNRTG	4 cut(s)	330, 1204, 1527, 1895
MspA1I	CMGCKG	2 cut(s)	1289, 2090
MspI	CCGG	8 cut(s)	54, 159, 893, 934, 1515, 1669, 1794, 2058
MunI	CAATTG	1 cut(s)	996
Mva1269I	GAATGC	2 cut(s)	2032, 2344
MvaI	CCWGG	6 cut(s)	511, 1060, 1312, 1481, 1579, 2004
MwoI	GCNNNNNNNGC	3 cut(s)	998, 2027, 2227
NarI	GGCGCC	1 cut(s)	260
NciI	CCSGG	6 cut(s)	159, 934, 1516, 1669, 1670, 1794
NdeI	CATATG	1 cut(s)	1365
NlaIV	GGNNCC	9 cut(s)	157, 261, 462, 508, 721, 891, 1279, 1359, 1419
NmeAIII	GCCGAG	1 cut(s)	1303
NmuCI	GTSAC	2 cut(s)	737, 1130
NspI	RCATGY	1 cut(s)	1894
OliI	CACNNNNGTG	1 cut(s)	1527
PaeR7I	CTCGAG	1 cut(s)	1135
PagI	TCATGA	2 cut(s)	265, 526
PceI	AGGCCT	1 cut(s)	197
PctI	GAATGC	2 cut(s)	2032, 2344
PdmI	GAANNNNTTC	1 cut(s)	484
PflFI	GACNNNGTC	1 cut(s)	1500
PfoI	TCCNGGA	3 cut(s)	1310, 1479, 2002
PkrI	GCNGC	6 cut(s)	862, 1198, 1291, 1448, 1535, 2092
PleI	GAGTC	8 cut(s)	100, 145, 970, 1146, 1342, 1491, 1624, 2228
PluTI	GGCGCC	1 cut(s)	263
PpsI	GAGTC	8 cut(s)	100, 145, 970, 1146, 1342, 1491, 1624, 2228
PpuMI	RGGWCCY	1 cut(s)	1418
Psp124BI	GAGCTC	2 cut(s)	500, 908
Psp5II	RGGWCCY	1 cut(s)	1418
Psp6I	CCWGG	6 cut(s)	509, 1058, 1310, 1479, 1577, 2002
PspGI	CCWGG	6 cut(s)	509, 1058, 1310, 1479, 1577, 2002
PspN4I	GGNNCC	9 cut(s)	157, 261, 462, 508, 721, 891, 1279, 1359, 1419
PspPI	GGNCC	4 cut(s)	155, 590, 1418, 1900
PspPPI	RGGWCCY	1 cut(s)	1418
PspXI	VCTCGAGB	1 cut(s)	1135
PstI	CTGCAG	1 cut(s)	1198
PstNI	CAGNNNCTG	2 cut(s)	1997, 2009
PsuI	RGATCY	5 cut(s)	506, 518, 1651, 1706, 2159
PsyI	GACNNNGTC	1 cut(s)	1500
PvuII	CAGCTG	1 cut(s)	2090
RsaI	GTAC	6 cut(s)	163, 190, 891, 1623, 2105, 2190
RsaNI	GTAC	6 cut(s)	162, 189, 890, 1622, 2104, 2189
RseI	CAYNNNNRTG	4 cut(s)	330, 1204, 1527, 1895
SacI	GAGCTC	2 cut(s)	500, 908
SaqAI	TTAA	6 cut(s)	179, 207, 272, 1458, 1950, 2207
SatI	GCNGC	6 cut(s)	861, 1197, 1290, 1447, 1534, 2091
Sau96I	GGNCC	4 cut(s)	155, 590, 1418, 1900
SchI	GAGTC	8 cut(s)	100, 146, 970, 1147, 1343, 1491, 1625, 2228
SduI	GDGCHC	4 cut(s)	500, 724, 908, 924
SfaNI	GCATC	5 cut(s)	745, 1474, 1765, 1866, 1984
SfcI	CTRYAG	1 cut(s)	1194
SfoI	GGCGCC	1 cut(s)	261
Sfr274I	CTCGAG	1 cut(s)	1135
SinI	GGWCC	2 cut(s)	1418, 1900
SlaI	CTCGAG	1 cut(s)	1135
SmaI	CCCGGG	1 cut(s)	1670
SmiMI	CAYNNNNRTG	4 cut(s)	330, 1204, 1527, 1895
SmlI	CTYRAG	4 cut(s)	408, 1110, 1135, 1861
SmoI	CTYRAG	4 cut(s)	408, 1110, 1135, 1861
SseBI	AGGCCT	1 cut(s)	197
SsiI	CCGC	6 cut(s)	431, 909, 1289, 1361, 1903, 2047
SspDI	GGCGCC	1 cut(s)	259
SstI	GAGCTC	2 cut(s)	500, 908
StuI	AGGCCT	1 cut(s)	197
StyI	CCWWGG	4 cut(s)	88, 455, 549, 1441
TaaI	ACNGT	2 cut(s)	1012, 1087
TaiI	ACGT	2 cut(s)	1132, 2130
TaqI	TCGA	5 cut(s)	419, 946, 1136, 1380, 1510
TatI	WGTACW	3 cut(s)	1621, 2103, 2188
TauI	GCSGC	1 cut(s)	1292
Tru1I	TTAA	6 cut(s)	179, 207, 272, 1458, 1950, 2207
Tru9I	TTAA	6 cut(s)	179, 207, 272, 1458, 1950, 2207
TscAI	CASTG	5 cut(s)	1015, 1206, 1532, 1650, 2028
TseFI	GTSAC	2 cut(s)	737, 1130
TseI	GCWGC	5 cut(s)	860, 1196, 1446, 1533, 2090
Tsp45I	GTSAC	2 cut(s)	737, 1130
TspGWI	ACGGA	2 cut(s)	1327, 2313
TspMI	CCCGGG	1 cut(s)	1668
TspRI	CASTG	5 cut(s)	1015, 1206, 1532, 1650, 2028
Tth111I	GACNNNGTC	1 cut(s)	1500
VneI	GTGCAC	1 cut(s)	920
VpaK11BI	GGWCC	2 cut(s)	1418, 1900
XagI	CCTNNNNNAGG	1 cut(s)	2360
XapI	RAATTY	4 cut(s)	621, 825, 870, 1726
XbaI	TCTAGA	1 cut(s)	1745
XceI	RCATGY	1 cut(s)	1894
XcmI	CCANNNNNNNNNTGG	1 cut(s)	95
XhoI	CTCGAG	1 cut(s)	1135
XmaI	CCCGGG	1 cut(s)	1668
XmnI	GAANNNNTTC	1 cut(s)	484

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.