zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G21810 AT3G21810 |
| fragaria_vesca | FvH4_6g43530 FvH4_6g43530 FvH4_6g43530 FvH4_6g43530 |
| malus_domestica | MD04G1053400.v1.1 MD04G1053600.v1.1 MD09G1105200.v1.1 |
| prunus_persica | Prupe.3G220100_v2.0.a1 Prupe.3G220100_v2.0.a1 |
| pyrus_communis | pycom05g17840 pycom09g02830 |
| rosa_chinensis | RchiOBHm_Chr2g0160051 RchiOBHm_Chr2g0160061 |
| rosa_laevigata | RLG00000021194 |
| rosa_multiflora | Rmu_sc0002023.1_g000015 Rmu_sc0013519.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00090060 Rroxscaffold_4G00309610 |
| rosa_rugosa | Rorug01G0120500 Rorug02G0480000 Rorug02G0480000 Rorug02G0480100 Rorug02G0480100 Rorug02G0480200 Rorug03G0356600 Rorug03G0356700 Rorug03G0356800 Rorug06G0182300 |
| rosa_samantha | Rh1AG135100 Rh1BG158100 Rh2AG546600 Rh2BG560000 Rh2CG530000 Rh2DG568700 Rh4CG275700 Rh5AG077800 Rh5AG298500 Rh7BG126200 |
| rosa_wichuraiana | Rw2G012000 Rw2G045200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 71 |
| Acc36I | ACCTGC | 2 cut(s) | 71, 155 |
| AccII | CGCG | 3 cut(s) | 45, 100, 106 |
| AciI | CCGC | 2 cut(s) | 24, 98 |
| AluBI | AGCT | 1 cut(s) | 15 |
| AluI | AGCT | 1 cut(s) | 15 |
| Alw21I | GWGCWC | 1 cut(s) | 17 |
| ApeKI | GCWGC | 1 cut(s) | 54 |
| AspLEI | GCGC | 4 cut(s) | 23, 45, 97, 102 |
| BanII | GRGCYC | 1 cut(s) | 17 |
| Bbv12I | GWGCWC | 1 cut(s) | 17 |
| BbvI | GCAGC | 1 cut(s) | 66 |
| BccI | CCATC | 2 cut(s) | 35, 172 |
| BfoI | RGCGCY | 1 cut(s) | 24 |
| BfuAI | ACCTGC | 2 cut(s) | 71, 155 |
| BisI | GCNGC | 3 cut(s) | 24, 55, 98 |
| BlsI | GCNGC | 3 cut(s) | 25, 56, 99 |
| BmiI | GGNNCC | 1 cut(s) | 115 |
| Bsa29I | ATCGAT | 1 cut(s) | 167 |
| BsaWI | WCCGGW | 1 cut(s) | 131 |
| BseCI | ATCGAT | 1 cut(s) | 167 |
| BseGI | GGATG | 1 cut(s) | 153 |
| BseRI | GAGGAG | 1 cut(s) | 25 |
| BseXI | GCAGC | 1 cut(s) | 66 |
| BseYI | CCCAGC | 1 cut(s) | 67 |
| Bsh1236I | CGCG | 3 cut(s) | 45, 100, 106 |
| BshVI | ATCGAT | 1 cut(s) | 167 |
| BsiHKAI | GWGCWC | 1 cut(s) | 17 |
| BsiSI | CCGG | 1 cut(s) | 132 |
| Bsp1286I | GDGCHC | 1 cut(s) | 17 |
| BspACI | CCGC | 2 cut(s) | 24, 98 |
| BspDI | ATCGAT | 1 cut(s) | 167 |
| BspFNI | CGCG | 3 cut(s) | 45, 100, 106 |
| BspLI | GGNNCC | 1 cut(s) | 115 |
| BspMI | ACCTGC | 2 cut(s) | 71, 155 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 63 |
| BstC8I | GCNNGC | 3 cut(s) | 52, 104, 141 |
| BstF5I | GGATG | 1 cut(s) | 153 |
| BstFNI | CGCG | 3 cut(s) | 45, 100, 106 |
| BstH2I | RGCGCY | 1 cut(s) | 24 |
| BstHHI | GCGC | 4 cut(s) | 23, 45, 97, 102 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 51, 63, 103 |
| BstUI | CGCG | 3 cut(s) | 45, 100, 106 |
| BstV1I | GCAGC | 1 cut(s) | 66 |
| Bsu15I | ATCGAT | 1 cut(s) | 167 |
| BsuTUI | ATCGAT | 1 cut(s) | 167 |
| BtsCI | GGATG | 1 cut(s) | 153 |
| BtsIMutI | CAGTG | 1 cut(s) | 32 |
| BveI | ACCTGC | 2 cut(s) | 71, 155 |
| Cac8I | GCNNGC | 3 cut(s) | 52, 104, 141 |
| CfoI | GCGC | 4 cut(s) | 23, 45, 97, 102 |
| ClaI | ATCGAT | 1 cut(s) | 167 |
| CseI | GACGC | 1 cut(s) | 139 |
| CviAII | CATG | 1 cut(s) | 76 |
| CviJI | RGCY | 2 cut(s) | 15, 50 |
| CviKI_1 | RGCY | 2 cut(s) | 15, 50 |
| Ecl136II | GAGCTC | 1 cut(s) | 15 |
| Eco24I | GRGCYC | 1 cut(s) | 17 |
| Eco53kI | GAGCTC | 1 cut(s) | 15 |
| EcoICRI | GAGCTC | 1 cut(s) | 15 |
| EcoT38I | GRGCYC | 1 cut(s) | 17 |
| FaeI | CATG | 1 cut(s) | 79 |
| FaiI | YATR | 4 cut(s) | 77, 93, 137, 172 |
| FatI | CATG | 1 cut(s) | 75 |
| Fnu4HI | GCNGC | 3 cut(s) | 24, 55, 98 |
| FokI | GGATG | 1 cut(s) | 140 |
| FriOI | GRGCYC | 1 cut(s) | 17 |
| Fsp4HI | GCNGC | 3 cut(s) | 24, 55, 98 |
| GlaI | GCGC | 4 cut(s) | 22, 44, 96, 101 |
| GluI | GCNGC | 3 cut(s) | 24, 55, 98 |
| GsaI | CCCAGC | 1 cut(s) | 71 |
| HaeII | RGCGCY | 1 cut(s) | 24 |
| HapII | CCGG | 1 cut(s) | 132 |
| HgaI | GACGC | 1 cut(s) | 139 |
| HhaI | GCGC | 4 cut(s) | 23, 45, 97, 102 |
| Hin1II | CATG | 1 cut(s) | 79 |
| Hin6I | GCGC | 4 cut(s) | 21, 43, 95, 100 |
| HinP1I | GCGC | 4 cut(s) | 21, 43, 95, 100 |
| HpaII | CCGG | 1 cut(s) | 132 |
| Hpy99I | CGWCG | 1 cut(s) | 88 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 51, 63, 103 |
| Hsp92II | CATG | 1 cut(s) | 79 |
| HspAI | GCGC | 4 cut(s) | 21, 43, 95, 100 |
| LmnI | GCTCC | 2 cut(s) | 12, 20 |
| LpnPI | CCDG | 6 cut(s) | 31, 76, 81, 136, 145, 160 |
| Lsp1109I | GCAGC | 1 cut(s) | 66 |
| MhlI | GDGCHC | 1 cut(s) | 17 |
| MnlI | CCTC | 3 cut(s) | 3, 127, 139 |
| MslI | CAYNNNNRTG | 2 cut(s) | 35, 169 |
| MspI | CCGG | 1 cut(s) | 132 |
| MteI | GCGCNGCGC | 1 cut(s) | 98 |
| MvnI | CGCG | 3 cut(s) | 45, 100, 106 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 51, 63, 103 |
| NlaIII | CATG | 1 cut(s) | 79 |
| NlaIV | GGNNCC | 1 cut(s) | 115 |
| PaqCI | CACCTGC | 1 cut(s) | 71 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 147 |
| PkrI | GCNGC | 3 cut(s) | 25, 56, 99 |
| Psp124BI | GAGCTC | 1 cut(s) | 17 |
| PspFI | CCCAGC | 1 cut(s) | 67 |
| PspN4I | GGNNCC | 1 cut(s) | 115 |
| RseI | CAYNNNNRTG | 2 cut(s) | 35, 169 |
| SacI | GAGCTC | 1 cut(s) | 17 |
| SatI | GCNGC | 3 cut(s) | 24, 55, 98 |
| SduI | GDGCHC | 1 cut(s) | 17 |
| SetI | ASST | 5 cut(s) | 17, 65, 119, 131, 149 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 35, 169 |
| SsiI | CCGC | 2 cut(s) | 24, 98 |
| SstI | GAGCTC | 1 cut(s) | 17 |
| TaqI | TCGA | 1 cut(s) | 167 |
| TauI | GCSGC | 2 cut(s) | 26, 100 |
| TscAI | CASTG | 1 cut(s) | 39 |
| TseI | GCWGC | 1 cut(s) | 54 |
| TspRI | CASTG | 1 cut(s) | 39 |