zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G21810 AT3G21810 |
| fragaria_vesca | FvH4_6g43530 FvH4_6g43530 FvH4_6g43530 FvH4_6g43530 |
| malus_domestica | MD04G1053400.v1.1 MD04G1053600.v1.1 MD09G1105200.v1.1 |
| prunus_persica | Prupe.3G220100_v2.0.a1 Prupe.3G220100_v2.0.a1 |
| pyrus_communis | pycom05g17840 pycom09g02830 |
| rosa_chinensis | RchiOBHm_Chr2g0160051 RchiOBHm_Chr2g0160061 |
| rosa_laevigata | RLG00000021194 |
| rosa_multiflora | Rmu_sc0002023.1_g000015 Rmu_sc0013519.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00090060 Rroxscaffold_4G00309610 |
| rosa_rugosa | Rorug01G0120500 Rorug02G0480000 Rorug02G0480000 Rorug02G0480100 Rorug02G0480100 Rorug02G0480200 Rorug03G0356600 Rorug03G0356700 Rorug03G0356800 Rorug06G0182300 |
| rosa_samantha | Rh1AG135100 Rh1BG158100 Rh2AG546600 Rh2BG560000 Rh2CG530000 Rh2DG568700 Rh4CG275700 Rh5AG077800 Rh5AG298500 Rh7BG126200 |
| rosa_wichuraiana | Rw2G012000 Rw2G045200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 20, 158 |
| AcoI | YGGCCR | 1 cut(s) | 274 |
| AfaI | GTAC | 2 cut(s) | 39, 183 |
| AflII | CTTAAG | 1 cut(s) | 215 |
| AgsI | TTSAA | 3 cut(s) | 47, 140, 198 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 11, 43 |
| AluBI | AGCT | 1 cut(s) | 256 |
| AluI | AGCT | 1 cut(s) | 256 |
| AlwI | GGATC | 2 cut(s) | 20, 158 |
| AoxI | GGCC | 1 cut(s) | 274 |
| AspS9I | GGNCC | 1 cut(s) | 229 |
| AvaII | GGWCC | 1 cut(s) | 229 |
| BbsI | GAAGAC | 1 cut(s) | 213 |
| BfaI | CTAG | 1 cut(s) | 263 |
| BfrI | CTTAAG | 1 cut(s) | 215 |
| Bme18I | GGWCC | 1 cut(s) | 229 |
| BmgT120I | GGNCC | 1 cut(s) | 229 |
| BpiI | GAAGAC | 1 cut(s) | 213 |
| BshFI | GGCC | 1 cut(s) | 276 |
| BslFI | GGGAC | 1 cut(s) | 37 |
| BsmFI | GGGAC | 1 cut(s) | 37 |
| BsnI | GGCC | 1 cut(s) | 276 |
| Bsp1407I | TGTACA | 1 cut(s) | 37 |
| Bsp143I | GATC | 5 cut(s) | 12, 83, 150, 221, 250 |
| BspANI | GGCC | 1 cut(s) | 276 |
| BspPI | GGATC | 2 cut(s) | 20, 158 |
| BspTI | CTTAAG | 1 cut(s) | 215 |
| BsrGI | TGTACA | 1 cut(s) | 37 |
| BssMI | GATC | 5 cut(s) | 12, 83, 150, 221, 250 |
| Bst4CI | ACNGT | 1 cut(s) | 115 |
| BstAFI | CTTAAG | 1 cut(s) | 215 |
| BstAUI | TGTACA | 1 cut(s) | 37 |
| BstC8I | GCNNGC | 1 cut(s) | 145 |
| BstKTI | GATC | 5 cut(s) | 15, 86, 153, 224, 253 |
| BstMBI | GATC | 5 cut(s) | 12, 83, 150, 221, 250 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 14 |
| BstNSI | RCATGY | 1 cut(s) | 127 |
| BstV2I | GAAGAC | 1 cut(s) | 213 |
| BstX2I | RGATCY | 1 cut(s) | 150 |
| BstYI | RGATCY | 1 cut(s) | 150 |
| BsuRI | GGCC | 1 cut(s) | 276 |
| Cac8I | GCNNGC | 1 cut(s) | 145 |
| Cfr13I | GGNCC | 1 cut(s) | 229 |
| Csp6I | GTAC | 2 cut(s) | 38, 182 |
| CviAII | CATG | 2 cut(s) | 103, 124 |
| CviJI | RGCY | 2 cut(s) | 256, 276 |
| CviKI_1 | RGCY | 2 cut(s) | 256, 276 |
| CviQI | GTAC | 2 cut(s) | 38, 182 |
| DpnI | GATC | 5 cut(s) | 14, 85, 152, 223, 252 |
| DpnII | GATC | 5 cut(s) | 12, 83, 150, 221, 250 |
| EaeI | YGGCCR | 1 cut(s) | 274 |
| Eco47I | GGWCC | 1 cut(s) | 229 |
| FaeI | CATG | 2 cut(s) | 106, 127 |
| FaiI | YATR | 7 cut(s) | 42, 104, 111, 125, 134, 159, 273 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 198, 230 |
| FaqI | GGGAC | 1 cut(s) | 37 |
| FatI | CATG | 2 cut(s) | 102, 123 |
| FspBI | CTAG | 1 cut(s) | 263 |
| HaeIII | GGCC | 1 cut(s) | 276 |
| Hin1II | CATG | 2 cut(s) | 106, 127 |
| Hpy166II | GTNNAC | 1 cut(s) | 118 |
| Hpy188III | TCNNGA | 4 cut(s) | 31, 97, 198, 263 |
| Hpy8I | GTNNAC | 1 cut(s) | 118 |
| HpyAV | CCTTC | 1 cut(s) | 41 |
| HpyCH4III | ACNGT | 1 cut(s) | 115 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 14 |
| Hsp92II | CATG | 2 cut(s) | 106, 127 |
| Kzo9I | GATC | 5 cut(s) | 12, 83, 150, 221, 250 |
| LpnPI | CCDG | 4 cut(s) | 16, 110, 133, 212 |
| MaeI | CTAG | 1 cut(s) | 263 |
| MalI | GATC | 5 cut(s) | 14, 85, 152, 223, 252 |
| MboI | GATC | 5 cut(s) | 12, 83, 150, 221, 250 |
| MboII | GAAGA | 1 cut(s) | 218 |
| MflI | RGATCY | 1 cut(s) | 150 |
| MluCI | AATT | 1 cut(s) | 106 |
| MmeI | TCCRAC | 1 cut(s) | 256 |
| MseI | TTAA | 1 cut(s) | 216 |
| MspCI | CTTAAG | 1 cut(s) | 215 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 14 |
| NdeII | GATC | 5 cut(s) | 12, 83, 150, 221, 250 |
| NlaIII | CATG | 2 cut(s) | 106, 127 |
| NspI | RCATGY | 1 cut(s) | 127 |
| PspPI | GGNCC | 1 cut(s) | 229 |
| PsuI | RGATCY | 1 cut(s) | 150 |
| RsaI | GTAC | 2 cut(s) | 39, 183 |
| RsaNI | GTAC | 2 cut(s) | 38, 182 |
| SaqAI | TTAA | 1 cut(s) | 216 |
| Sau3AI | GATC | 5 cut(s) | 12, 83, 150, 221, 250 |
| Sau96I | GGNCC | 1 cut(s) | 229 |
| SetI | ASST | 2 cut(s) | 231, 258 |
| SinI | GGWCC | 1 cut(s) | 229 |
| SmlI | CTYRAG | 1 cut(s) | 215 |
| SmoI | CTYRAG | 1 cut(s) | 215 |
| Sse9I | AATT | 1 cut(s) | 106 |
| SspI | AATATT | 1 cut(s) | 91 |
| SspMI | CTAG | 1 cut(s) | 263 |
| TaaI | ACNGT | 1 cut(s) | 115 |
| TasI | AATT | 1 cut(s) | 106 |
| TatI | WGTACW | 2 cut(s) | 37, 181 |
| Tru1I | TTAA | 1 cut(s) | 216 |
| Tru9I | TTAA | 1 cut(s) | 216 |
| TspDTI | ATGAA | 1 cut(s) | 119 |
| Vha464I | CTTAAG | 1 cut(s) | 215 |
| VpaK11BI | GGWCC | 1 cut(s) | 229 |
| XbaI | TCTAGA | 1 cut(s) | 262 |
| XceI | RCATGY | 1 cut(s) | 127 |
| XspI | CTAG | 1 cut(s) | 263 |