zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G21810 AT3G21810 |
| fragaria_vesca | FvH4_6g43530 FvH4_6g43530 FvH4_6g43530 FvH4_6g43530 |
| malus_domestica | MD04G1053400.v1.1 MD04G1053600.v1.1 MD09G1105200.v1.1 |
| prunus_persica | Prupe.3G220100_v2.0.a1 Prupe.3G220100_v2.0.a1 |
| pyrus_communis | pycom05g17840 pycom09g02830 |
| rosa_chinensis | RchiOBHm_Chr2g0160051 RchiOBHm_Chr2g0160061 |
| rosa_laevigata | RLG00000021194 |
| rosa_multiflora | Rmu_sc0002023.1_g000015 Rmu_sc0013519.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00090060 Rroxscaffold_4G00309610 |
| rosa_rugosa | Rorug01G0120500 Rorug02G0480000 Rorug02G0480000 Rorug02G0480100 Rorug02G0480100 Rorug02G0480200 Rorug03G0356600 Rorug03G0356700 Rorug03G0356800 Rorug06G0182300 |
| rosa_samantha | Rh1AG135100 Rh1BG158100 Rh2AG546600 Rh2BG560000 Rh2CG530000 Rh2DG568700 Rh4CG275700 Rh5AG077800 Rh5AG298500 Rh7BG126200 |
| rosa_wichuraiana | Rw2G012000 Rw2G045200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 142 |
| AcsI | RAATTY | 2 cut(s) | 153, 235 |
| AgsI | TTSAA | 1 cut(s) | 222 |
| AhlI | ACTAGT | 1 cut(s) | 172 |
| AjnI | CCWGG | 1 cut(s) | 224 |
| AluBI | AGCT | 1 cut(s) | 9 |
| AluI | AGCT | 1 cut(s) | 9 |
| Alw21I | GWGCWC | 1 cut(s) | 172 |
| Alw44I | GTGCAC | 1 cut(s) | 168 |
| ApaLI | GTGCAC | 1 cut(s) | 168 |
| ApeKI | GCWGC | 1 cut(s) | 9 |
| ApoI | RAATTY | 2 cut(s) | 153, 235 |
| AsuC2I | CCSGG | 1 cut(s) | 101 |
| BaeGI | GKGCMC | 1 cut(s) | 172 |
| BanI | GGYRCC | 1 cut(s) | 142 |
| Bbv12I | GWGCWC | 1 cut(s) | 172 |
| BccI | CCATC | 2 cut(s) | 133, 154 |
| BciT130I | CCWGG | 1 cut(s) | 226 |
| BcnI | CCSGG | 1 cut(s) | 101 |
| BcuI | ACTAGT | 1 cut(s) | 172 |
| BfaI | CTAG | 2 cut(s) | 150, 173 |
| BisI | GCNGC | 1 cut(s) | 10 |
| BlsI | GCNGC | 1 cut(s) | 11 |
| Bme1390I | CCNGG | 2 cut(s) | 101, 226 |
| BmiI | GGNNCC | 1 cut(s) | 144 |
| BmrFI | CCNGG | 2 cut(s) | 101, 226 |
| BpuMI | CCSGG | 1 cut(s) | 101 |
| Bse1I | ACTGG | 1 cut(s) | 94 |
| Bse3DI | GCAATG | 1 cut(s) | 19 |
| BseBI | CCWGG | 1 cut(s) | 226 |
| BseGI | GGATG | 2 cut(s) | 109, 234 |
| BseMI | GCAATG | 1 cut(s) | 19 |
| BseNI | ACTGG | 1 cut(s) | 94 |
| BseSI | GKGCMC | 1 cut(s) | 172 |
| BshNI | GGYRCC | 1 cut(s) | 142 |
| BsiHKAI | GWGCWC | 1 cut(s) | 172 |
| BsiSI | CCGG | 1 cut(s) | 101 |
| Bsp1286I | GDGCHC | 1 cut(s) | 172 |
| BspLI | GGNNCC | 1 cut(s) | 144 |
| BspT107I | GGYRCC | 1 cut(s) | 142 |
| BsrDI | GCAATG | 1 cut(s) | 19 |
| BsrI | ACTGG | 1 cut(s) | 94 |
| Bst2UI | CCWGG | 1 cut(s) | 226 |
| Bst4CI | ACNGT | 1 cut(s) | 119 |
| BstF5I | GGATG | 2 cut(s) | 109, 234 |
| BstNI | CCWGG | 1 cut(s) | 226 |
| BstSCI | CCNGG | 2 cut(s) | 99, 224 |
| BstSLI | GKGCMC | 1 cut(s) | 172 |
| BtsCI | GGATG | 2 cut(s) | 109, 234 |
| CviAII | CATG | 1 cut(s) | 158 |
| CviJI | RGCY | 1 cut(s) | 9 |
| CviKI_1 | RGCY | 1 cut(s) | 9 |
| EcoRI | GAATTC | 2 cut(s) | 153, 235 |
| EcoRII | CCWGG | 1 cut(s) | 224 |
| FaeI | CATG | 1 cut(s) | 161 |
| FaiI | YATR | 6 cut(s) | 35, 48, 131, 159, 180, 277 |
| FatI | CATG | 1 cut(s) | 157 |
| Fnu4HI | GCNGC | 1 cut(s) | 10 |
| FokI | GGATG | 2 cut(s) | 116, 241 |
| Fsp4HI | GCNGC | 1 cut(s) | 10 |
| FspBI | CTAG | 2 cut(s) | 150, 173 |
| GluI | GCNGC | 1 cut(s) | 10 |
| HapII | CCGG | 1 cut(s) | 101 |
| Hin1II | CATG | 1 cut(s) | 161 |
| HinfI | GANTC | 1 cut(s) | 202 |
| HpaII | CCGG | 1 cut(s) | 101 |
| Hpy166II | GTNNAC | 1 cut(s) | 170 |
| Hpy188I | TCNGA | 1 cut(s) | 138 |
| Hpy188III | TCNNGA | 1 cut(s) | 150 |
| Hpy8I | GTNNAC | 1 cut(s) | 170 |
| HpyAV | CCTTC | 2 cut(s) | 192, 255 |
| HpyCH4III | ACNGT | 1 cut(s) | 119 |
| HpyCH4V | TGCA | 3 cut(s) | 12, 73, 170 |
| Hsp92II | CATG | 1 cut(s) | 161 |
| LpnPI | CCDG | 6 cut(s) | 59, 75, 114, 180, 211, 238 |
| MaeI | CTAG | 2 cut(s) | 150, 173 |
| MaeIII | GTNAC | 2 cut(s) | 58, 160 |
| MboII | GAAGA | 2 cut(s) | 16, 244 |
| MhlI | GDGCHC | 1 cut(s) | 172 |
| MluCI | AATT | 2 cut(s) | 153, 235 |
| MspI | CCGG | 1 cut(s) | 101 |
| MspR9I | CCNGG | 2 cut(s) | 101, 226 |
| MvaI | CCWGG | 1 cut(s) | 226 |
| NciI | CCSGG | 1 cut(s) | 101 |
| NlaIII | CATG | 1 cut(s) | 161 |
| NlaIV | GGNNCC | 1 cut(s) | 144 |
| NmuCI | GTSAC | 1 cut(s) | 58 |
| PfeI | GAWTC | 1 cut(s) | 202 |
| PfoI | TCCNGGA | 1 cut(s) | 99 |
| PkrI | GCNGC | 1 cut(s) | 11 |
| Psp6I | CCWGG | 1 cut(s) | 224 |
| PspGI | CCWGG | 1 cut(s) | 224 |
| PspN4I | GGNNCC | 1 cut(s) | 144 |
| SatI | GCNGC | 1 cut(s) | 10 |
| ScrFI | CCNGG | 2 cut(s) | 101, 226 |
| SduI | GDGCHC | 1 cut(s) | 172 |
| SetI | ASST | 2 cut(s) | 11, 227 |
| SpeI | ACTAGT | 1 cut(s) | 172 |
| Sse9I | AATT | 2 cut(s) | 153, 235 |
| SspMI | CTAG | 2 cut(s) | 150, 173 |
| StyD4I | CCNGG | 2 cut(s) | 99, 224 |
| TaaI | ACNGT | 1 cut(s) | 119 |
| TaqI | TCGA | 1 cut(s) | 248 |
| TasI | AATT | 2 cut(s) | 153, 235 |
| TfiI | GAWTC | 1 cut(s) | 202 |
| TseFI | GTSAC | 1 cut(s) | 58 |
| TseI | GCWGC | 1 cut(s) | 9 |
| Tsp45I | GTSAC | 1 cut(s) | 58 |
| TspDTI | ATGAA | 3 cut(s) | 17, 146, 245 |
| VneI | GTGCAC | 1 cut(s) | 168 |
| XapI | RAATTY | 2 cut(s) | 153, 235 |
| XbaI | TCTAGA | 1 cut(s) | 149 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 31 |
| XspI | CTAG | 2 cut(s) | 150, 173 |