zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G21810 AT3G21810 |
| fragaria_vesca | FvH4_6g43530 FvH4_6g43530 FvH4_6g43530 FvH4_6g43530 |
| malus_domestica | MD04G1053400.v1.1 MD04G1053600.v1.1 MD09G1105200.v1.1 |
| prunus_persica | Prupe.3G220100_v2.0.a1 Prupe.3G220100_v2.0.a1 |
| pyrus_communis | pycom05g17840 pycom09g02830 |
| rosa_chinensis | RchiOBHm_Chr2g0160051 RchiOBHm_Chr2g0160061 |
| rosa_laevigata | RLG00000021194 |
| rosa_multiflora | Rmu_sc0002023.1_g000015 Rmu_sc0013519.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00090060 Rroxscaffold_4G00309610 |
| rosa_rugosa | Rorug01G0120500 Rorug02G0480000 Rorug02G0480000 Rorug02G0480100 Rorug02G0480100 Rorug02G0480200 Rorug03G0356600 Rorug03G0356700 Rorug03G0356800 Rorug06G0182300 |
| rosa_samantha | Rh1AG135100 Rh1BG158100 Rh2AG546600 Rh2BG560000 Rh2CG530000 Rh2DG568700 Rh4CG275700 Rh5AG077800 Rh5AG298500 Rh7BG126200 |
| rosa_wichuraiana | Rw2G012000 Rw2G045200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 26 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 1 cut(s) | 172 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 194 |
| AflII | CTTAAG | 1 cut(s) | 83 |
| AgsI | TTSAA | 1 cut(s) | 66 |
| AluBI | AGCT | 1 cut(s) | 127 |
| AluI | AGCT | 1 cut(s) | 127 |
| AlwI | GGATC | 1 cut(s) | 26 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 1 cut(s) | 124 |
| ApoI | RAATTY | 1 cut(s) | 172 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbsI | GAAGAC | 1 cut(s) | 81 |
| BbvI | GCAGC | 1 cut(s) | 136 |
| BfrI | CTTAAG | 1 cut(s) | 83 |
| BisI | GCNGC | 1 cut(s) | 125 |
| BlsI | GCNGC | 1 cut(s) | 126 |
| BmiI | GGNNCC | 1 cut(s) | 186 |
| BpiI | GAAGAC | 1 cut(s) | 81 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 79, 111 |
| BsaJI | CCNNGG | 1 cut(s) | 180 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 194 |
| Bse1I | ACTGG | 1 cut(s) | 104 |
| BseDI | CCNNGG | 1 cut(s) | 180 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 194 |
| BseNI | ACTGG | 1 cut(s) | 104 |
| BseXI | GCAGC | 1 cut(s) | 136 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BslFI | GGGAC | 1 cut(s) | 92 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 194 |
| BsmFI | GGGAC | 1 cut(s) | 92 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp143I | GATC | 1 cut(s) | 18 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspLI | GGNNCC | 1 cut(s) | 186 |
| BspPI | GGATC | 1 cut(s) | 26 |
| BspTI | CTTAAG | 1 cut(s) | 83 |
| BsrI | ACTGG | 1 cut(s) | 104 |
| BssECI | CCNNGG | 1 cut(s) | 180 |
| BssMI | GATC | 1 cut(s) | 18 |
| BssT1I | CCWWGG | 1 cut(s) | 180 |
| Bst4CI | ACNGT | 1 cut(s) | 10 |
| BstAFI | CTTAAG | 1 cut(s) | 83 |
| BstKTI | GATC | 1 cut(s) | 21 |
| BstMBI | GATC | 1 cut(s) | 18 |
| BstV1I | GCAGC | 1 cut(s) | 136 |
| BstV2I | GAAGAC | 1 cut(s) | 81 |
| BstX2I | RGATCY | 1 cut(s) | 18 |
| BstYI | RGATCY | 1 cut(s) | 18 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| CviJI | RGCY | 3 cut(s) | 5, 127, 157 |
| CviKI_1 | RGCY | 3 cut(s) | 5, 127, 157 |
| DpnI | GATC | 1 cut(s) | 20 |
| DpnII | GATC | 1 cut(s) | 18 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eco130I | CCWWGG | 1 cut(s) | 180 |
| EcoRI | GAATTC | 1 cut(s) | 172 |
| EcoT14I | CCWWGG | 1 cut(s) | 180 |
| ErhI | CCWWGG | 1 cut(s) | 180 |
| FaiI | YATR | 1 cut(s) | 27 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 66, 98 |
| FaqI | GGGAC | 1 cut(s) | 92 |
| Fnu4HI | GCNGC | 1 cut(s) | 125 |
| Fsp4HI | GCNGC | 1 cut(s) | 125 |
| GluI | GCNGC | 1 cut(s) | 125 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HincII | GTYRAC | 1 cut(s) | 34 |
| HindII | GTYRAC | 1 cut(s) | 34 |
| HpaI | GTTAAC | 1 cut(s) | 34 |
| Hpy166II | GTNNAC | 1 cut(s) | 34 |
| Hpy188I | TCNGA | 1 cut(s) | 144 |
| Hpy8I | GTNNAC | 1 cut(s) | 34 |
| HpyCH4III | ACNGT | 1 cut(s) | 10 |
| KspAI | GTTAAC | 1 cut(s) | 34 |
| Kzo9I | GATC | 1 cut(s) | 18 |
| LmnI | GCTCC | 1 cut(s) | 121 |
| LpnPI | CCDG | 1 cut(s) | 117 |
| Lsp1109I | GCAGC | 1 cut(s) | 136 |
| MalI | GATC | 1 cut(s) | 20 |
| MboI | GATC | 1 cut(s) | 18 |
| MboII | GAAGA | 1 cut(s) | 86 |
| MflI | RGATCY | 1 cut(s) | 18 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 1 cut(s) | 172 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MnlI | CCTC | 3 cut(s) | 9, 81, 188 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 3 cut(s) | 33, 84, 113 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspA1I | CMGCKG | 1 cut(s) | 127 |
| MspCI | CTTAAG | 1 cut(s) | 83 |
| NdeII | GATC | 1 cut(s) | 18 |
| NlaIV | GGNNCC | 1 cut(s) | 186 |
| PkrI | GCNGC | 1 cut(s) | 126 |
| PspN4I | GGNNCC | 1 cut(s) | 186 |
| PsuI | RGATCY | 1 cut(s) | 18 |
| PvuII | CAGCTG | 1 cut(s) | 127 |
| SaqAI | TTAA | 3 cut(s) | 33, 84, 113 |
| SatI | GCNGC | 1 cut(s) | 125 |
| Sau3AI | GATC | 1 cut(s) | 18 |
| SetI | ASST | 2 cut(s) | 129, 199 |
| SgeI | CNNG | 8 cut(s) | 27, 49, 78, 116, 156, 160, 170, 193 |
| SmlI | CTYRAG | 1 cut(s) | 83 |
| SmoI | CTYRAG | 1 cut(s) | 83 |
| Sse9I | AATT | 1 cut(s) | 172 |
| StyI | CCWWGG | 1 cut(s) | 180 |
| TaaI | ACNGT | 1 cut(s) | 10 |
| TaqI | TCGA | 2 cut(s) | 14, 159 |
| TasI | AATT | 1 cut(s) | 172 |
| Tru1I | TTAA | 3 cut(s) | 33, 84, 113 |
| Tru9I | TTAA | 3 cut(s) | 33, 84, 113 |
| TseI | GCWGC | 1 cut(s) | 124 |
| Vha464I | CTTAAG | 1 cut(s) | 83 |
| XapI | RAATTY | 1 cut(s) | 172 |