zinc finger CCCH domain-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G21810 AT3G21810 |
| fragaria_vesca | FvH4_6g43530 FvH4_6g43530 FvH4_6g43530 FvH4_6g43530 |
| malus_domestica | MD04G1053400.v1.1 MD04G1053600.v1.1 MD09G1105200.v1.1 |
| prunus_persica | Prupe.3G220100_v2.0.a1 Prupe.3G220100_v2.0.a1 |
| pyrus_communis | pycom05g17840 pycom09g02830 |
| rosa_chinensis | RchiOBHm_Chr2g0160051 RchiOBHm_Chr2g0160061 |
| rosa_laevigata | RLG00000021194 |
| rosa_multiflora | Rmu_sc0002023.1_g000015 Rmu_sc0013519.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00090060 Rroxscaffold_4G00309610 |
| rosa_rugosa | Rorug01G0120500 Rorug02G0480000 Rorug02G0480000 Rorug02G0480100 Rorug02G0480100 Rorug02G0480200 Rorug03G0356600 Rorug03G0356700 Rorug03G0356800 Rorug06G0182300 |
| rosa_samantha | Rh1AG135100 Rh1BG158100 Rh2AG546600 Rh2BG560000 Rh2CG530000 Rh2DG568700 Rh4CG275700 Rh5AG077800 Rh5AG298500 Rh7BG126200 |
| rosa_wichuraiana | Rw2G012000 Rw2G045200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 223 |
| AcsI | RAATTY | 1 cut(s) | 312 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 241 |
| AgsI | TTSAA | 1 cut(s) | 117 |
| AluBI | AGCT | 3 cut(s) | 73, 178, 325 |
| AluI | AGCT | 3 cut(s) | 73, 178, 325 |
| Alw21I | GWGCWC | 1 cut(s) | 44 |
| ApeKI | GCWGC | 1 cut(s) | 175 |
| ApoI | RAATTY | 1 cut(s) | 312 |
| AseI | ATTAAT | 1 cut(s) | 123 |
| BanI | GGYRCC | 1 cut(s) | 223 |
| Bbv12I | GWGCWC | 1 cut(s) | 44 |
| BbvI | GCAGC | 1 cut(s) | 187 |
| BfaI | CTAG | 1 cut(s) | 36 |
| BisI | GCNGC | 1 cut(s) | 176 |
| BlsI | GCNGC | 1 cut(s) | 177 |
| BmiI | GGNNCC | 2 cut(s) | 225, 233 |
| BsaJI | CCNNGG | 1 cut(s) | 227 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 241 |
| Bse1I | ACTGG | 1 cut(s) | 155 |
| Bse3DI | GCAATG | 1 cut(s) | 142 |
| BseDI | CCNNGG | 1 cut(s) | 227 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 241 |
| BseMI | GCAATG | 1 cut(s) | 142 |
| BseMII | CTCAG | 2 cut(s) | 57, 312 |
| BseNI | ACTGG | 1 cut(s) | 155 |
| BseXI | GCAGC | 1 cut(s) | 187 |
| BsgI | GTGCAG | 1 cut(s) | 308 |
| BshNI | GGYRCC | 1 cut(s) | 223 |
| BsiHKAI | GWGCWC | 1 cut(s) | 44 |
| BslFI | GGGAC | 1 cut(s) | 143 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 241 |
| BsmFI | GGGAC | 1 cut(s) | 143 |
| Bsp1286I | GDGCHC | 1 cut(s) | 44 |
| Bsp143I | GATC | 1 cut(s) | 67 |
| BspCNI | CTCAG | 2 cut(s) | 56, 313 |
| BspLI | GGNNCC | 2 cut(s) | 225, 233 |
| BspT107I | GGYRCC | 1 cut(s) | 223 |
| BsrDI | GCAATG | 1 cut(s) | 142 |
| BsrI | ACTGG | 1 cut(s) | 155 |
| BssECI | CCNNGG | 1 cut(s) | 227 |
| BssMI | GATC | 1 cut(s) | 67 |
| BssT1I | CCWWGG | 1 cut(s) | 227 |
| Bst4CI | ACNGT | 1 cut(s) | 286 |
| Bst6I | CTCTTC | 1 cut(s) | 102 |
| BstDEI | CTNAG | 2 cut(s) | 43, 321 |
| BstKTI | GATC | 1 cut(s) | 70 |
| BstMBI | GATC | 1 cut(s) | 67 |
| BstNSI | RCATGY | 1 cut(s) | 300 |
| BstV1I | GCAGC | 1 cut(s) | 187 |
| CviAII | CATG | 1 cut(s) | 297 |
| CviJI | RGCY | 3 cut(s) | 73, 178, 325 |
| CviKI_1 | RGCY | 3 cut(s) | 73, 178, 325 |
| DdeI | CTNAG | 2 cut(s) | 43, 321 |
| DpnI | GATC | 1 cut(s) | 69 |
| DpnII | GATC | 1 cut(s) | 67 |
| Eam1104I | CTCTTC | 1 cut(s) | 102 |
| EarI | CTCTTC | 1 cut(s) | 102 |
| Eco130I | CCWWGG | 1 cut(s) | 227 |
| EcoT14I | CCWWGG | 1 cut(s) | 227 |
| ErhI | CCWWGG | 1 cut(s) | 227 |
| FaeI | CATG | 1 cut(s) | 300 |
| FaiI | YATR | 5 cut(s) | 15, 24, 90, 276, 298 |
| FaqI | GGGAC | 1 cut(s) | 143 |
| FatI | CATG | 1 cut(s) | 296 |
| Fnu4HI | GCNGC | 1 cut(s) | 176 |
| Fsp4HI | GCNGC | 1 cut(s) | 176 |
| FspBI | CTAG | 1 cut(s) | 36 |
| GluI | GCNGC | 1 cut(s) | 176 |
| Hin1II | CATG | 1 cut(s) | 300 |
| HinfI | GANTC | 1 cut(s) | 113 |
| Hpy188III | TCNNGA | 1 cut(s) | 250 |
| HpyCH4III | ACNGT | 1 cut(s) | 286 |
| HpyCH4V | TGCA | 2 cut(s) | 289, 296 |
| HpyF3I | CTNAG | 2 cut(s) | 43, 321 |
| Hsp92II | CATG | 1 cut(s) | 300 |
| Kzo9I | GATC | 1 cut(s) | 67 |
| LmnI | GCTCC | 1 cut(s) | 172 |
| LpnPI | CCDG | 3 cut(s) | 13, 168, 275 |
| Lsp1109I | GCAGC | 1 cut(s) | 187 |
| MaeI | CTAG | 1 cut(s) | 36 |
| MaeIII | GTNAC | 1 cut(s) | 254 |
| MalI | GATC | 1 cut(s) | 69 |
| MboI | GATC | 1 cut(s) | 67 |
| MboII | GAAGA | 1 cut(s) | 119 |
| MhlI | GDGCHC | 1 cut(s) | 44 |
| MluCI | AATT | 3 cut(s) | 16, 93, 312 |
| MmeI | TCCRAC | 1 cut(s) | 73 |
| MnlI | CCTC | 2 cut(s) | 103, 296 |
| MseI | TTAA | 2 cut(s) | 123, 164 |
| MspA1I | CMGCKG | 1 cut(s) | 178 |
| NdeII | GATC | 1 cut(s) | 67 |
| NlaIII | CATG | 1 cut(s) | 300 |
| NlaIV | GGNNCC | 2 cut(s) | 225, 233 |
| NmuCI | GTSAC | 1 cut(s) | 254 |
| NspI | RCATGY | 1 cut(s) | 300 |
| PfeI | GAWTC | 1 cut(s) | 113 |
| PkrI | GCNGC | 1 cut(s) | 177 |
| PshBI | ATTAAT | 1 cut(s) | 123 |
| PspN4I | GGNNCC | 2 cut(s) | 225, 233 |
| PvuII | CAGCTG | 1 cut(s) | 178 |
| SaqAI | TTAA | 2 cut(s) | 123, 164 |
| SatI | GCNGC | 1 cut(s) | 176 |
| Sau3AI | GATC | 1 cut(s) | 67 |
| SduI | GDGCHC | 1 cut(s) | 44 |
| SetI | ASST | 6 cut(s) | 41, 75, 180, 209, 246, 327 |
| Sse9I | AATT | 3 cut(s) | 16, 93, 312 |
| SspI | AATATT | 1 cut(s) | 127 |
| SspMI | CTAG | 1 cut(s) | 36 |
| StyI | CCWWGG | 1 cut(s) | 227 |
| TaaI | ACNGT | 1 cut(s) | 286 |
| TaqI | TCGA | 1 cut(s) | 249 |
| TasI | AATT | 3 cut(s) | 16, 93, 312 |
| TfiI | GAWTC | 1 cut(s) | 113 |
| Tru1I | TTAA | 2 cut(s) | 123, 164 |
| Tru9I | TTAA | 2 cut(s) | 123, 164 |
| TseFI | GTSAC | 1 cut(s) | 254 |
| TseI | GCWGC | 1 cut(s) | 175 |
| Tsp45I | GTSAC | 1 cut(s) | 254 |
| TspDTI | ATGAA | 2 cut(s) | 120, 291 |
| TspGWI | ACGGA | 2 cut(s) | 273, 295 |
| VspI | ATTAAT | 1 cut(s) | 123 |
| XapI | RAATTY | 1 cut(s) | 312 |
| XceI | RCATGY | 1 cut(s) | 300 |
| XspI | CTAG | 1 cut(s) | 36 |