isoform X1
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 2 cut(s) | 638, 719 |
| AccII | CGCG | 2 cut(s) | 701, 807 |
| AciI | CCGC | 9 cut(s) | 23, 83, 287, 428, 636, 699, 701, 711, 719 |
| AclWI | GGATC | 1 cut(s) | 749 |
| AcuI | CTGAAG | 1 cut(s) | 109 |
| AfaI | GTAC | 4 cut(s) | 368, 549, 596, 724 |
| AgsI | TTSAA | 3 cut(s) | 380, 627, 849 |
| AjnI | CCWGG | 1 cut(s) | 307 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 956, 988 |
| AluBI | AGCT | 3 cut(s) | 515, 630, 752 |
| AluI | AGCT | 3 cut(s) | 515, 630, 752 |
| Alw26I | GTCTC | 1 cut(s) | 454 |
| AlwI | GGATC | 1 cut(s) | 749 |
| AoxI | GGCC | 3 cut(s) | 79, 670, 996 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 547, 579 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 69, 765 |
| AspLEI | GCGC | 1 cut(s) | 807 |
| AspS9I | GGNCC | 2 cut(s) | 80, 997 |
| AsuHPI | GGTGA | 1 cut(s) | 323 |
| AsuII | TTCGAA | 1 cut(s) | 409 |
| AxyI | CCTNAGG | 1 cut(s) | 1001 |
| BbsI | GAAGAC | 3 cut(s) | 547, 584, 933 |
| BbvCI | CCTCAGC | 1 cut(s) | 516 |
| BccI | CCATC | 2 cut(s) | 30, 767 |
| BceAI | ACGGC | 1 cut(s) | 678 |
| BciT130I | CCWGG | 1 cut(s) | 309 |
| BciVI | GTATCC | 2 cut(s) | 197, 943 |
| BclI | TGATCA | 1 cut(s) | 349 |
| BcoDI | GTCTC | 1 cut(s) | 454 |
| BfaI | CTAG | 1 cut(s) | 86 |
| BfmI | CTRYAG | 1 cut(s) | 155 |
| BfuI | GTATCC | 2 cut(s) | 197, 943 |
| BisI | GCNGC | 2 cut(s) | 24, 636 |
| BlpI | GCTNAGC | 1 cut(s) | 631 |
| BlsI | GCNGC | 2 cut(s) | 25, 637 |
| BmcAI | AGTACT | 1 cut(s) | 368 |
| Bme1390I | CCNGG | 1 cut(s) | 309 |
| BmgT120I | GGNCC | 2 cut(s) | 80, 997 |
| BmrFI | CCNGG | 1 cut(s) | 309 |
| BmsI | GCATC | 2 cut(s) | 373, 460 |
| BpiI | GAAGAC | 3 cut(s) | 547, 584, 933 |
| BpmI | CTGGAG | 4 cut(s) | 219, 287, 460, 687 |
| Bpu10I | CCTNAGC | 1 cut(s) | 516 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 631 |
| Bpu14I | TTCGAA | 1 cut(s) | 409 |
| BpuEI | CTTGAG | 1 cut(s) | 60 |
| BsaBI | GATNNNNATC | 1 cut(s) | 178 |
| BsaJI | CCNNGG | 1 cut(s) | 699 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 504, 534, 956, 986 |
| Bse1I | ACTGG | 2 cut(s) | 477, 912 |
| Bse21I | CCTNAGG | 1 cut(s) | 1001 |
| Bse8I | GATNNNNATC | 1 cut(s) | 178 |
| BseBI | CCWGG | 1 cut(s) | 309 |
| BseDI | CCNNGG | 1 cut(s) | 699 |
| BseJI | GATNNNNATC | 1 cut(s) | 178 |
| BseMII | CTCAG | 2 cut(s) | 507, 745 |
| BseNI | ACTGG | 2 cut(s) | 477, 912 |
| BseRI | GAGGAG | 1 cut(s) | 958 |
| Bsh1236I | CGCG | 2 cut(s) | 701, 807 |
| Bsh1285I | CGRYCG | 1 cut(s) | 432 |
| BshFI | GGCC | 3 cut(s) | 81, 672, 998 |
| BsiEI | CGRYCG | 1 cut(s) | 432 |
| BslFI | GGGAC | 1 cut(s) | 473 |
| BsmAI | GTCTC | 1 cut(s) | 454 |
| BsmFI | GGGAC | 1 cut(s) | 473 |
| BsnI | GGCC | 3 cut(s) | 81, 672, 998 |
| Bsp119I | TTCGAA | 1 cut(s) | 409 |
| Bsp143I | GATC | 4 cut(s) | 349, 754, 814, 978 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 631 |
| BspACI | CCGC | 9 cut(s) | 23, 83, 287, 428, 636, 699, 701, 711, 719 |
| BspANI | GGCC | 3 cut(s) | 81, 672, 998 |
| BspCNI | CTCAG | 3 cut(s) | 508, 744, 1014 |
| BspFNI | CGCG | 2 cut(s) | 701, 807 |
| BspPI | GGATC | 1 cut(s) | 749 |
| BspT104I | TTCGAA | 1 cut(s) | 409 |
| BsrBI | CCGCTC | 2 cut(s) | 638, 719 |
| BsrI | ACTGG | 2 cut(s) | 477, 912 |
| BssECI | CCNNGG | 1 cut(s) | 699 |
| BssMI | GATC | 4 cut(s) | 349, 754, 814, 978 |
| Bst2UI | CCWGG | 1 cut(s) | 309 |
| BstBI | TTCGAA | 1 cut(s) | 409 |
| BstC8I | GCNNGC | 2 cut(s) | 83, 803 |
| BstDEI | CTNAG | 5 cut(s) | 455, 516, 631, 731, 1001 |
| BstDSI | CCRYGG | 1 cut(s) | 699 |
| BstFNI | CGCG | 2 cut(s) | 701, 807 |
| BstHHI | GCGC | 1 cut(s) | 807 |
| BstKTI | GATC | 4 cut(s) | 352, 757, 817, 981 |
| BstMAI | GTCTC | 1 cut(s) | 454 |
| BstMBI | GATC | 4 cut(s) | 349, 754, 814, 978 |
| BstMCI | CGRYCG | 1 cut(s) | 432 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 29, 57 |
| BstNI | CCWGG | 1 cut(s) | 309 |
| BstSCI | CCNGG | 1 cut(s) | 307 |
| BstSFI | CTRYAG | 1 cut(s) | 155 |
| BstUI | CGCG | 2 cut(s) | 701, 807 |
| BstV2I | GAAGAC | 3 cut(s) | 547, 584, 933 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1001 |
| BsuI | GTATCC | 2 cut(s) | 197, 943 |
| BsuRI | GGCC | 3 cut(s) | 81, 672, 998 |
| BtgI | CCRYGG | 1 cut(s) | 699 |
| BtsI | GCAGTG | 1 cut(s) | 58 |
| BtsIMutI | CAGTG | 5 cut(s) | 58, 484, 870, 871, 905 |
| Cac8I | GCNNGC | 2 cut(s) | 83, 803 |
| CfoI | GCGC | 1 cut(s) | 807 |
| Cfr13I | GGNCC | 2 cut(s) | 80, 997 |
| Cfr42I | CCGCGG | 1 cut(s) | 702 |
| Csp6I | GTAC | 4 cut(s) | 367, 548, 595, 723 |
| CviAII | CATG | 1 cut(s) | 824 |
| CviQI | GTAC | 4 cut(s) | 367, 548, 595, 723 |
| DdeI | CTNAG | 5 cut(s) | 455, 516, 631, 731, 1001 |
| DpnI | GATC | 4 cut(s) | 351, 756, 816, 980 |
| DpnII | GATC | 4 cut(s) | 349, 754, 814, 978 |
| Eco57I | CTGAAG | 1 cut(s) | 109 |
| Eco81I | CCTNAGG | 1 cut(s) | 1001 |
| EcoRII | CCWGG | 1 cut(s) | 307 |
| FaeI | CATG | 1 cut(s) | 827 |
| FaiI | YATR | 9 cut(s) | 131, 177, 322, 324, 603, 648, 825, 959, 995 |
| FaqI | GGGAC | 1 cut(s) | 473 |
| FatI | CATG | 1 cut(s) | 823 |
| FauI | CCCGC | 5 cut(s) | 90, 280, 694, 706, 712 |
| FbaI | TGATCA | 1 cut(s) | 349 |
| Fnu4HI | GCNGC | 2 cut(s) | 24, 636 |
| Fsp4HI | GCNGC | 2 cut(s) | 24, 636 |
| FspBI | CTAG | 1 cut(s) | 86 |
| GlaI | GCGC | 1 cut(s) | 806 |
| GluI | GCNGC | 2 cut(s) | 24, 636 |
| GsuI | CTGGAG | 4 cut(s) | 219, 287, 460, 687 |
| HaeIII | GGCC | 3 cut(s) | 81, 672, 998 |
| HhaI | GCGC | 1 cut(s) | 807 |
| Hin1II | CATG | 1 cut(s) | 827 |
| Hin6I | GCGC | 1 cut(s) | 805 |
| HinP1I | GCGC | 1 cut(s) | 805 |
| HindIII | AAGCTT | 1 cut(s) | 628 |
| HinfI | GANTC | 2 cut(s) | 140, 179 |
| HphI | GGTGA | 1 cut(s) | 323 |
| Hpy166II | GTNNAC | 1 cut(s) | 975 |
| Hpy188I | TCNGA | 2 cut(s) | 354, 920 |
| Hpy188III | TCNNGA | 3 cut(s) | 758, 770, 976 |
| Hpy8I | GTNNAC | 1 cut(s) | 975 |
| HpyAV | CCTTC | 2 cut(s) | 405, 604 |
| HpyCH4V | TGCA | 2 cut(s) | 51, 957 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 29, 57 |
| HpyF3I | CTNAG | 5 cut(s) | 455, 516, 631, 731, 1001 |
| Hsp92II | CATG | 1 cut(s) | 827 |
| HspAI | GCGC | 1 cut(s) | 805 |
| Ksp22I | TGATCA | 1 cut(s) | 349 |
| KspI | CCGCGG | 1 cut(s) | 702 |
| Kzo9I | GATC | 4 cut(s) | 349, 754, 814, 978 |
| LmnI | GCTCC | 3 cut(s) | 512, 643, 716 |
| LweI | GCATC | 2 cut(s) | 373, 460 |
| MaeI | CTAG | 1 cut(s) | 86 |
| MaeIII | GTNAC | 2 cut(s) | 53, 150 |
| MalI | GATC | 4 cut(s) | 351, 756, 816, 980 |
| MbiI | CCGCTC | 2 cut(s) | 638, 719 |
| MboI | GATC | 4 cut(s) | 349, 754, 814, 978 |
| MluCI | AATT | 3 cut(s) | 65, 489, 793 |
| MlyI | GAGTC | 1 cut(s) | 149 |
| MroXI | GAANNNNTTC | 2 cut(s) | 69, 765 |
| MseI | TTAA | 1 cut(s) | 837 |
| MspA1I | CMGCKG | 1 cut(s) | 701 |
| MspR9I | CCNGG | 1 cut(s) | 309 |
| MvaI | CCWGG | 1 cut(s) | 309 |
| MvnI | CGCG | 2 cut(s) | 701, 807 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 29, 57 |
| NdeII | GATC | 4 cut(s) | 349, 754, 814, 978 |
| NlaIII | CATG | 1 cut(s) | 827 |
| NmuCI | GTSAC | 1 cut(s) | 53 |
| NspV | TTCGAA | 1 cut(s) | 409 |
| PdmI | GAANNNNTTC | 2 cut(s) | 69, 765 |
| PfeI | GAWTC | 1 cut(s) | 179 |
| PkrI | GCNGC | 2 cut(s) | 25, 637 |
| PleI | GAGTC | 1 cut(s) | 148 |
| PpsI | GAGTC | 1 cut(s) | 148 |
| Psp6I | CCWGG | 1 cut(s) | 307 |
| PspGI | CCWGG | 1 cut(s) | 307 |
| PspPI | GGNCC | 2 cut(s) | 80, 997 |
| RsaI | GTAC | 4 cut(s) | 368, 549, 596, 724 |
| RsaNI | GTAC | 4 cut(s) | 367, 548, 595, 723 |
| SacII | CCGCGG | 1 cut(s) | 702 |
| SaqAI | TTAA | 1 cut(s) | 837 |
| SatI | GCNGC | 2 cut(s) | 24, 636 |
| Sau3AI | GATC | 4 cut(s) | 349, 754, 814, 978 |
| Sau96I | GGNCC | 2 cut(s) | 80, 997 |
| ScaI | AGTACT | 1 cut(s) | 368 |
| SchI | GAGTC | 1 cut(s) | 149 |
| ScrFI | CCNGG | 1 cut(s) | 309 |
| SetI | ASST | 6 cut(s) | 338, 517, 522, 615, 632, 754 |
| SfaNI | GCATC | 2 cut(s) | 373, 460 |
| SfcI | CTRYAG | 1 cut(s) | 155 |
| Sfr303I | CCGCGG | 1 cut(s) | 702 |
| SfuI | TTCGAA | 1 cut(s) | 409 |
| SgrBI | CCGCGG | 1 cut(s) | 702 |
| SmlI | CTYRAG | 1 cut(s) | 75 |
| SmoI | CTYRAG | 1 cut(s) | 75 |
| Sse9I | AATT | 3 cut(s) | 65, 489, 793 |
| SsiI | CCGC | 9 cut(s) | 23, 83, 287, 428, 636, 699, 701, 711, 719 |
| SspMI | CTAG | 1 cut(s) | 86 |
| StyD4I | CCNGG | 1 cut(s) | 307 |
| TaqI | TCGA | 1 cut(s) | 409 |
| TasI | AATT | 3 cut(s) | 65, 489, 793 |
| TatI | WGTACW | 2 cut(s) | 366, 594 |
| TauI | GCSGC | 2 cut(s) | 26, 638 |
| TfiI | GAWTC | 1 cut(s) | 179 |
| Tru1I | TTAA | 1 cut(s) | 837 |
| Tru9I | TTAA | 1 cut(s) | 837 |
| TscAI | CASTG | 5 cut(s) | 58, 484, 871, 877, 912 |
| TseFI | GTSAC | 1 cut(s) | 53 |
| Tsp45I | GTSAC | 1 cut(s) | 53 |
| TspDTI | ATGAA | 4 cut(s) | 146, 192, 663, 889 |
| TspRI | CASTG | 5 cut(s) | 58, 484, 871, 877, 912 |
| XmnI | GAANNNNTTC | 2 cut(s) | 69, 765 |
| XspI | CTAG | 1 cut(s) | 86 |
| ZrmI | AGTACT | 1 cut(s) | 368 |