Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0002223

Physical Location & Seq

Genomic Coordinates Forward (+)

1116221 .. 1119666

Gene Structure 3446 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0016600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2460 bp

ATGGCAACTGCAAGAGCCAATATCTTATTGCCTTTGTTTTGTTTCATAGCGCTTCTCCCTTCTGTGATGTTTACTGGTTTTTCAGCAGAAGATCGAGCTATATACTTGGTTTTAATGGAAGGAGACTCACTTGCATTCAATGGAGGCTCTCCATCTTCACGCCTCAACATAAACAGTGAAATTTCGAAGGCTCATGCAAAGCAATTGGAGGATTCTCATGATCAACTTCTACAGAGCAATCTTGAGACTGGAAGCTACAGCAAGCTTTACAGCTTTAAACACGTTGCAAACGGCTTTGCTGTCCATACAACCCCTTCACAGGCTGAAAAGCTGAAATATGCTCCAAGAGTAAAGCTGGTTGAGAGAGATAGAGGAGCAAAGTTGATGACAACGTACACTCCTCGCTTCCTTGAGTTACCTGAAGGAGTATGGACGCAAGAAGGAGGCCAACGTAATGCTGGTGAAGGAATTGTGATTGGTTTTGTGGATTCTGGCATCAACCCTGCACATCTAAGTTTTGCTTATAATCCTCTGAGCCCTTTCACCTCTAATATTTCTCATTTTTCGGGTGCTTGTGAGACTGGTCCTCTATTCCCAGCAACTTCATGCAATGGTAAAATAGTTTCAGCCAAGTTTTTCTCAGCTGGGGCTCTAGCCATTGCTACTCTCAACAGTTCAGTGGATTTTCTTTCACCCTTTGATGCAGATGGACATGGCAGTCATGTGGCATCGGTTGCTGCTGGAAATGCTGGAGTTCCTGTGGTTGTGAATGGCTTCTATTATGGACAAGCTAGTGGAATGGCACCACGTGCGCGGATTGCTGTATATAAAGCTGTGTATCCTACAGTAGGAACTTTGGCAGATGTAGTTTCTGCAATTGATGAAGCAATTCGAGATGGAGTGGATGTCCTAGCACTCTCTGTCGGACCAGATGAACCACCATTGGGTAGAGTGACCTTCTTAAGCATGTTTGATGTGTTCATGTTATATGCTCGACGAGCTGGGGTTTTTGTGGTGCAAGCAGCAGGTAATCGAGGGCCAGACCCTTCAAGTGTAGTGTCTTACAGCCCTTGGGCGGTAGGTGTAGCTTCTTCCGGCACAGATAGAATTTATCCTTCTTCTATTGTTCTTGGAAATGGAGCAAGAATTGAAGGTGTGGGATTATCAGGACCAACTTTTGGATATAGGTTACTTCAACATAGGTTGGTTTTGGCCAAGGATGCAATTAATCCAATTGGGTCATTCCCAAGAACCCCACCCTATGTTGAAGAGTGCCAATTTCCACAAGCATTGGATCCTAGGTTAGTTATAGGTAGTATTGTCATCTGCACATTCTCGGAGGGATTCTATAACAGGACATCCACCCTTAATGCCATCATCAACACGGCAAGAGCTCTCGGATTTATGGGTTTTGTTCTTGTTGCAAATCCAGCCTATGGTGACTTCATTGCAGAGCCTGTTCCTTTTGCTGTTTCTGGCATTTTGGTCCCAAATGTAACCAATTCCCAGGTTATATTACAATACTATGAACAACAAACATTCAAGGATGAGAGAGGATTTCCTACAAGACTTGCAGCGAGAGCATCAATCGGAGAAGGAAGAGCTGCTTCTTTCACGGGCCAAGCACCTATTGTTAGCAGATTCTCTTCGAGAGGACCAGATTTCGTTGACAGAGACAGGAAGCCTGCTGATGTACTAAAGCCCGATATTCTTGCCCCGGGCCACCAAATCTGGGGAGCTTGGAGCCCCATTAGTGCCTTAGAACCCTCATTAGTGGGACAAAGTTTTGCACTGCTTTCTGGTACAAGCATGGCAACACCTCATATCGCTGGAATAGCAGCACTTATTAAGCAGTACAATCCTTCATGGACTCCTTCCATGATTGCATCTGCGATTTCCACCACGGCAACCAAATATGATAAAAATGGAGAACTGATAATGGCTGAAGGATCTGATATAGGCAGTAAATATCCCTCCACTCCTTTTGATTTTGGAGCTGGCTTTGTCAGTCCAAGTCATGCCATGGATCCGGGTCTAGTCTTATCTTCAGGATATGAAGACTACATCAGCTTCTTGTGCTCATTGCATGATACCAATCCAAGTACAATAAGAACTGTCACTGGAGAGTTGTGCAACAAGCCACTTGACCATCCAGCCAATCTGAACCTTCCTTCAGTAACAATATCAGCGTTGAATGGGTCTCAAATTGTACGAAGGGTTTTCATGAACGTAGAGAGCAAGCCAGAGACTTACTCTAGCTCGGTGCTGCCACCAAATGGGACAACAGTAGACATATCTCCTCCTTCGTTTACCATAGCTCCACAAGGTACTCAAGAGCTAGATATAGAGTTCAATGTGACCCAAGCAATGGATCAATTCACCTATGGTGAAATCGTTCTTACAGGAAGTTTAAATCATATTGTCAGGATACCTTTATCAGTTTTTCCAGTTTCAATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001871 GO:0003674 GO:0003824 GO:0004553 GO:0005488 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0007154 GO:0008150 GO:0008422 GO:0009505 GO:0009987 GO:0015926 GO:0016020 GO:0016787 GO:0016798 GO:0030246 GO:0030247 GO:0030312 GO:0031224 GO:0031225 GO:0031226 GO:0042973 GO:0044425 GO:0044459 GO:0044464 GO:0046658 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Glyco_hydro_17

Protein Analysis

819

Amino Acids

87.32

Weight (kDa)

5.72

Isoelectric Point (pI)

33.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	65 - 128	3.9e-12	Peptidase inhibitor I9
Peptidase_S8	PF00082	154 - 643	6.3e-41	Subtilase family
fn3_6	PF17766	720 - 814	1.1e-16	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002223)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30080 AT1G30080 AT4G18340 AT4G18340
fragaria_vesca	FvH4_3g05490 FvH4_3g05490 FvH4_4g29790 FvH4_4g29811 FvH4_4g29820
malus_domestica	MD05G1283400.v1.1 MD10G1261700.v1.1
prunus_persica	Prupe.4G081200_v2.0.a1
pyrus_communis	pycom10g21790
rosa_chinensis	RchiOBHm_Chr4g0438021 RchiOBHm_Chr4g0438071 RchiOBHm_Chr5g0006351 RchiOBHm_Chr5g0014251
rosa_laevigata	RLG00000006390 RLG00000032094
rosa_multiflora	Rmu_sc0004728.1_g000007 Rmu_sc0007538.1_g000003 Rmu_sc0027297.1_g000001 Rmu_ssc0000120.1_g000004
rosa_roxburghii	Rroxscaffold_1G00062320 Rroxscaffold_5G00379160 Rroxscaffold_5G00379200
rosa_rugosa	Rorug04G0306300 Rorug04G0306500 Rorug05G0016600
rosa_samantha	Rh4AG357900 Rh4AG358200 Rh4BG368800 Rh4CG383200 Rh4DG363900 Rh5AG049100 Rh5AG110900 Rh5BG108200 Rh5CG056600 Rh5DG106300
rosa_wichuraiana	Rw0G006270 Rw0G011480 Rw0G016210 Rw5G009670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	525
AasI	GACNNNNNNGTC	1 cut(s)	717
Acc36I	ACCTGC	1 cut(s)	1016
AccB1I	GGYRCC	1 cut(s)	802
AccB7I	CCANNNNNTGG	4 cut(s)	1178, 1436, 2276, 2368
AccI	GTMKAC	1 cut(s)	2289
AccII	CGCG	1 cut(s)	814
AciI	CCGC	2 cut(s)	814, 1076
AclWI	GGATC	6 cut(s)	1289, 1302, 1957, 2021, 2034, 2379
AcoI	YGGCCR	1 cut(s)	1212
AcsI	RAATTY	2 cut(s)	180, 1107
AcuI	CTGAAG	4 cut(s)	441, 1965, 2031, 2157
AcvI	CACGTG	1 cut(s)	809
AdeI	CACNNNGTG	1 cut(s)	809
AfaI	GTAC	7 cut(s)	395, 1695, 1804, 1856, 2104, 2211, 2329
AfeI	AGCGCT	1 cut(s)	51
AfiI	CCNNNNNNNGG	9 cut(s)	319, 848, 944, 1075, 1178, 1436, 1732, 2276, 2368
AflII	CTTAAG	1 cut(s)	961
AflIII	ACRYGT	1 cut(s)	280
AgsI	TTSAA	9 cut(s)	139, 1050, 1151, 1196, 1268, 1543, 2194, 2353, 2454
AjnI	CCWGG	1 cut(s)	1506
Alw21I	GWGCWC	2 cut(s)	1396, 2081
Alw26I	GTCTC	6 cut(s)	117, 239, 572, 1668, 2205, 2240
AlwI	GGATC	6 cut(s)	1289, 1302, 1957, 2021, 2034, 2379
AlwNI	CAGNNNCTG	1 cut(s)	1457
Ama87I	CYCGRG	1 cut(s)	1717
Aor51HI	AGCGCT	1 cut(s)	51
AoxI	GGCC	5 cut(s)	445, 1037, 1212, 1618, 1720
ApeKI	GCWGC	6 cut(s)	737, 1022, 1574, 1604, 1838, 2266
ApoI	RAATTY	2 cut(s)	180, 1107
AseI	ATTAAT	1 cut(s)	1227
Asp700I	GAANNNNTTC	3 cut(s)	773, 888, 2394
AspA2I	CCTAGG	1 cut(s)	1298
AspLEI	GCGC	2 cut(s)	52, 814
AspS9I	GGNCC	8 cut(s)	584, 926, 1037, 1169, 1486, 1618, 1655, 1720
AsuC2I	CCSGG	3 cut(s)	1718, 1719, 2031
AsuHPI	GGTGA	6 cut(s)	473, 535, 684, 1451, 2371, 2399
AsuII	TTCGAA	1 cut(s)	185
AvaI	CYCGRG	1 cut(s)	1717
AvaII	GGWCC	5 cut(s)	584, 926, 1169, 1486, 1655
AvrII	CCTAGG	1 cut(s)	1298
BalI	TGGCCA	1 cut(s)	1214
BamHI	GGATCC	2 cut(s)	1294, 2026
BanI	GGYRCC	1 cut(s)	802
BanII	GRGCYC	4 cut(s)	539, 652, 1396, 1748
BbrPI	CACGTG	1 cut(s)	809
BbsI	GAAGAC	1 cut(s)	2064
Bbv12I	GWGCWC	2 cut(s)	1396, 2081
BbvI	GCAGC	6 cut(s)	724, 1034, 1586, 1591, 1850, 2253
BccI	CCATC	5 cut(s)	160, 701, 890, 1382, 2157
BceAI	ACGGC	3 cut(s)	307, 1401, 1920
BcgI	CGANNNNNNTGC	2 cut(s)	1694, 1728
BciT130I	CCWGG	1 cut(s)	1508
BciVI	GTATCC	2 cut(s)	849, 2421
BclI	TGATCA	1 cut(s)	220
BcnI	CCSGG	3 cut(s)	1718, 1719, 2031
BcoDI	GTCTC	6 cut(s)	117, 239, 572, 1668, 2205, 2240
BfaI	CTAG	7 cut(s)	653, 792, 911, 1299, 2036, 2256, 2339
BfmI	CTRYAG	3 cut(s)	230, 256, 843
BfoI	RGCGCY	1 cut(s)	53
BfrI	CTTAAG	1 cut(s)	961
BfuAI	ACCTGC	1 cut(s)	1016
BfuI	GTATCC	2 cut(s)	849, 2421
BisI	GCNGC	6 cut(s)	738, 1023, 1575, 1605, 1839, 2267
BlnI	CCTAGG	1 cut(s)	1298
BlsI	GCNGC	6 cut(s)	739, 1024, 1576, 1606, 1840, 2268
Bme1390I	CCNGG	4 cut(s)	1508, 1718, 1719, 2031
Bme18I	GGWCC	5 cut(s)	584, 926, 1169, 1486, 1655
BmeT110I	CYCGRG	1 cut(s)	1717
BmgT120I	GGNCC	8 cut(s)	584, 926, 1037, 1169, 1486, 1618, 1655, 1720
BmiI	GGNNCC	5 cut(s)	804, 1296, 1488, 1745, 2028
BmrFI	CCNGG	4 cut(s)	1508, 1718, 1719, 2031
BmsI	GCATC	6 cut(s)	504, 691, 737, 1210, 1592, 1895
BpiI	GAAGAC	1 cut(s)	2064
BplI	GAGNNNNNCTC	2 cut(s)	2237, 2269
BpmI	CTGGAG	2 cut(s)	771, 2142
Bpu14I	TTCGAA	1 cut(s)	185
BpuEI	CTTGAG	3 cut(s)	263, 431, 2316
BpuMI	CCSGG	3 cut(s)	1718, 1719, 2031
BsaAI	YACGTR	1 cut(s)	809
BsaBI	GATNNNNATC	1 cut(s)	2094
BsaI	GGTCTC	1 cut(s)	2205
BsaJI	CCNNGG	8 cut(s)	1070, 1215, 1298, 1506, 1716, 1717, 1902, 2022
BsaXI	ACNNNNNCTCC	8 cut(s)	382, 412, 744, 774, 891, 921, 2302, 2332
Bsc4I	CCNNNNNNNGG	9 cut(s)	319, 848, 944, 1075, 1178, 1436, 1732, 2276, 2368
Bse1I	ACTGG	5 cut(s)	79, 253, 586, 2125, 2447
Bse3DI	GCAATG	5 cut(s)	616, 657, 1446, 2081, 2373
Bse8I	GATNNNNATC	1 cut(s)	2094
BseBI	CCWGG	1 cut(s)	1508
BseDI	CCNNGG	8 cut(s)	1070, 1215, 1298, 1506, 1716, 1717, 1902, 2022
BseGI	GGATG	5 cut(s)	910, 1225, 1358, 1552, 2149
BseJI	GATNNNNATC	1 cut(s)	2094
BseLI	CCNNNNNNNGG	9 cut(s)	319, 848, 944, 1075, 1178, 1436, 1732, 2276, 2368
BseMI	GCAATG	5 cut(s)	616, 657, 1446, 2081, 2373
BseMII	CTCAG	2 cut(s)	524, 654
BseNI	ACTGG	5 cut(s)	79, 253, 586, 2125, 2447
BseRI	GAGGAG	3 cut(s)	387, 390, 2289
BseXI	GCAGC	6 cut(s)	724, 1034, 1586, 1591, 1850, 2253
BseYI	CCCAGC	3 cut(s)	595, 644, 1001
BsgI	GTGCAG	2 cut(s)	489, 1312
Bsh1236I	CGCG	1 cut(s)	814
BshFI	GGCC	5 cut(s)	447, 1039, 1214, 1620, 1722
BshNI	GGYRCC	1 cut(s)	802
BsiHKAI	GWGCWC	2 cut(s)	1396, 2081
BsiHKCI	CYCGRG	1 cut(s)	1717
BsiSI	CCGG	3 cut(s)	1095, 1718, 2030
BslFI	GGGAC	3 cut(s)	1472, 1791, 2293
BslI	CCNNNNNNNGG	9 cut(s)	319, 848, 944, 1075, 1178, 1436, 1732, 2276, 2368
BsmAI	GTCTC	6 cut(s)	117, 239, 572, 1668, 2205, 2240
BsmFI	GGGAC	3 cut(s)	1472, 1791, 2293
BsmI	GAATGC	1 cut(s)	134
BsnI	GGCC	5 cut(s)	447, 1039, 1214, 1620, 1722
Bso31I	GGTCTC	1 cut(s)	2205
BsoBI	CYCGRG	1 cut(s)	1717
Bsp119I	TTCGAA	1 cut(s)	185
Bsp1286I	GDGCHC	5 cut(s)	539, 652, 1396, 1748, 2081
Bsp143I	GATC	6 cut(s)	91, 220, 1294, 1949, 2026, 2371
Bsp19I	CCATGG	1 cut(s)	2022
BspACI	CCGC	2 cut(s)	814, 1076
BspANI	GGCC	5 cut(s)	447, 1039, 1214, 1620, 1722
BspCNI	CTCAG	2 cut(s)	525, 653
BspFNI	CGCG	1 cut(s)	814
BspHI	TCATGA	2 cut(s)	217, 2223
BspLI	GGNNCC	5 cut(s)	804, 1296, 1488, 1745, 2028
BspMI	ACCTGC	1 cut(s)	1016
BspPI	GGATC	6 cut(s)	1289, 1302, 1957, 2021, 2034, 2379
BspQI	GCTCTTC	1 cut(s)	1594
BspT104I	TTCGAA	1 cut(s)	185
BspT107I	GGYRCC	1 cut(s)	802
BspTI	CTTAAG	1 cut(s)	961
BspTNI	GGTCTC	1 cut(s)	2205
BsrDI	GCAATG	5 cut(s)	616, 657, 1446, 2081, 2373
BsrI	ACTGG	5 cut(s)	79, 253, 586, 2125, 2447
BssECI	CCNNGG	8 cut(s)	1070, 1215, 1298, 1506, 1716, 1717, 1902, 2022
BssMI	GATC	6 cut(s)	91, 220, 1294, 1949, 2026, 2371
BssT1I	CCWWGG	4 cut(s)	1070, 1215, 1298, 2022
Bst2UI	CCWGG	1 cut(s)	1508
Bst4CI	ACNGT	5 cut(s)	176, 674, 847, 2116, 2287
Bst6I	CTCTTC	3 cut(s)	1263, 1594, 1651
BstAFI	CTTAAG	1 cut(s)	961
BstAPI	GCANNNNNTGC	2 cut(s)	734, 809
BstBAI	YACGTR	1 cut(s)	809
BstBI	TTCGAA	1 cut(s)	185
BstC8I	GCNNGC	5 cut(s)	263, 1020, 1686, 1999, 2240
BstDEI	CTNAG	4 cut(s)	512, 533, 640, 1759
BstDSI	CCRYGG	2 cut(s)	1902, 2022
BstENI	CCTNNNNNAGG	1 cut(s)	846
BstF5I	GGATG	5 cut(s)	910, 1225, 1358, 1552, 2149
BstFNI	CGCG	1 cut(s)	814
BstH2I	RGCGCY	1 cut(s)	53
BstHHI	GCGC	2 cut(s)	52, 814
BstKTI	GATC	6 cut(s)	94, 223, 1297, 1952, 2029, 2374
BstMAI	GTCTC	6 cut(s)	117, 239, 572, 1668, 2205, 2240
BstMBI	GATC	6 cut(s)	91, 220, 1294, 1949, 2026, 2371
BstNI	CCWGG	1 cut(s)	1508
BstNSI	RCATGY	1 cut(s)	970
BstSCI	CCNGG	4 cut(s)	1506, 1716, 1717, 2029
BstSFI	CTRYAG	3 cut(s)	230, 256, 843
BstUI	CGCG	1 cut(s)	814
BstV1I	GCAGC	6 cut(s)	724, 1034, 1586, 1591, 1850, 2253
BstV2I	GAAGAC	1 cut(s)	2064
BstX2I	RGATCY	3 cut(s)	1294, 1949, 2026
BstYI	RGATCY	3 cut(s)	1294, 1949, 2026
BsuI	GTATCC	2 cut(s)	849, 2421
BsuRI	GGCC	5 cut(s)	447, 1039, 1214, 1620, 1722
BtgI	CCRYGG	2 cut(s)	1902, 2022
BtsCI	GGATG	5 cut(s)	910, 1225, 1358, 1552, 2149
BtsI	GCAGTG	1 cut(s)	1790
BtsIMutI	CAGTG	4 cut(s)	181, 684, 1790, 2118
BveI	ACCTGC	1 cut(s)	1016
Cac8I	GCNNGC	5 cut(s)	263, 1020, 1686, 1999, 2240
CaiI	CAGNNNCTG	1 cut(s)	1457
CciI	TCATGA	2 cut(s)	217, 2223
CfoI	GCGC	2 cut(s)	52, 814
Cfr13I	GGNCC	8 cut(s)	584, 926, 1037, 1169, 1486, 1618, 1655, 1720
Cfr9I	CCCGGG	1 cut(s)	1717
CseI	GACGC	1 cut(s)	442
Csp6I	GTAC	7 cut(s)	394, 1694, 1803, 1855, 2103, 2210, 2328
CspCI	CAANNNNNGTGG	4 cut(s)	1272, 1307, 1966, 2001
CviQI	GTAC	7 cut(s)	394, 1694, 1803, 1855, 2103, 2210, 2328
DdeI	CTNAG	4 cut(s)	512, 533, 640, 1759
DpnI	GATC	6 cut(s)	93, 222, 1296, 1951, 2028, 2373
DpnII	GATC	6 cut(s)	91, 220, 1294, 1949, 2026, 2371
DraI	TTTAAA	2 cut(s)	277, 2412
DraIII	CACNNNGTG	1 cut(s)	809
DrdI	GACNNNNNNGTC	1 cut(s)	717
DseDI	GACNNNNNNGTC	1 cut(s)	717
EaeI	YGGCCR	1 cut(s)	1212
Eam1104I	CTCTTC	3 cut(s)	1263, 1594, 1651
EarI	CTCTTC	3 cut(s)	1263, 1594, 1651
Ecl136II	GAGCTC	1 cut(s)	1394
Eco130I	CCWWGG	4 cut(s)	1070, 1215, 1298, 2022
Eco24I	GRGCYC	4 cut(s)	539, 652, 1396, 1748
Eco31I	GGTCTC	1 cut(s)	2205
Eco47I	GGWCC	5 cut(s)	584, 926, 1169, 1486, 1655
Eco47III	AGCGCT	1 cut(s)	51
Eco53kI	GAGCTC	1 cut(s)	1394
Eco57I	CTGAAG	4 cut(s)	441, 1965, 2031, 2157
Eco72I	CACGTG	1 cut(s)	809
Eco88I	CYCGRG	1 cut(s)	1717
EcoICRI	GAGCTC	1 cut(s)	1394
EcoNI	CCTNNNNNAGG	1 cut(s)	846
EcoRII	CCWGG	1 cut(s)	1506
EcoT14I	CCWWGG	4 cut(s)	1070, 1215, 1298, 2022
EcoT38I	GRGCYC	4 cut(s)	539, 652, 1396, 1748
ErhI	CCWWGG	4 cut(s)	1070, 1215, 1298, 2022
FalI	AAGNNNNNCTT	4 cut(s)	505, 537, 1591, 1623
FaqI	GGGAC	3 cut(s)	1472, 1791, 2293
FbaI	TGATCA	1 cut(s)	220
FblI	GTMKAC	1 cut(s)	2289
Fnu4HI	GCNGC	6 cut(s)	738, 1023, 1575, 1605, 1839, 2267
FokI	GGATG	5 cut(s)	917, 1232, 1345, 1559, 2136
FriOI	GRGCYC	4 cut(s)	539, 652, 1396, 1748
Fsp4HI	GCNGC	6 cut(s)	738, 1023, 1575, 1605, 1839, 2267
FspBI	CTAG	7 cut(s)	653, 792, 911, 1299, 2036, 2256, 2339
GlaI	GCGC	2 cut(s)	51, 813
GluI	GCNGC	6 cut(s)	738, 1023, 1575, 1605, 1839, 2267
GsaI	CCCAGC	3 cut(s)	599, 648, 1005
GsuI	CTGGAG	2 cut(s)	771, 2142
HaeII	RGCGCY	1 cut(s)	53
HaeIII	GGCC	5 cut(s)	447, 1039, 1214, 1620, 1722
HapII	CCGG	3 cut(s)	1095, 1718, 2030
HgaI	GACGC	1 cut(s)	442
HhaI	GCGC	2 cut(s)	52, 814
Hin6I	GCGC	2 cut(s)	50, 812
HinP1I	GCGC	2 cut(s)	50, 812
HincII	GTYRAC	1 cut(s)	1669
HindII	GTYRAC	1 cut(s)	1669
HindIII	AAGCTT	1 cut(s)	263
HinfI	GANTC	6 cut(s)	125, 212, 488, 1344, 1641, 1870
HpaII	CCGG	3 cut(s)	1095, 1718, 2030
HphI	GGTGA	6 cut(s)	473, 535, 684, 1451, 2371, 2399
Hpy166II	GTNNAC	5 cut(s)	72, 396, 1669, 2290, 2310
Hpy188I	TCNGA	7 cut(s)	534, 926, 1339, 1400, 1592, 1954, 2163
Hpy188III	TCNNGA	9 cut(s)	218, 242, 893, 1167, 1650, 2049, 2224, 2333, 2425
Hpy8I	GTNNAC	5 cut(s)	72, 396, 1669, 2290, 2310
Hpy99I	CGWCG	1 cut(s)	999
HpyCH4III	ACNGT	5 cut(s)	176, 674, 847, 2116, 2287
HpyCH4IV	ACGT	5 cut(s)	282, 392, 451, 808, 2229
HpyF3I	CTNAG	4 cut(s)	512, 533, 640, 1759
HpySE526I	ACGT	5 cut(s)	282, 392, 451, 808, 2229
HspAI	GCGC	2 cut(s)	50, 812
Ksp22I	TGATCA	1 cut(s)	220
Kzo9I	GATC	6 cut(s)	91, 220, 1294, 1949, 2026, 2371
LguI	GCTCTTC	1 cut(s)	1594
LmnI	GCTCC	7 cut(s)	346, 374, 1139, 1736, 1743, 1994, 2323
Lsp1109I	GCAGC	6 cut(s)	724, 1034, 1586, 1591, 1850, 2253
LweI	GCATC	6 cut(s)	504, 691, 737, 1210, 1592, 1895
MaeI	CTAG	7 cut(s)	653, 792, 911, 1299, 2036, 2256, 2339
MaeII	ACGT	5 cut(s)	282, 392, 451, 808, 2229
MaeIII	GTNAC	8 cut(s)	414, 952, 1188, 1439, 1495, 2116, 2176, 2356
MalI	GATC	6 cut(s)	93, 222, 1296, 1951, 2028, 2373
MboI	GATC	6 cut(s)	91, 220, 1294, 1949, 2026, 2371
MboII	GAAGA	9 cut(s)	101, 147, 1083, 1110, 1280, 1611, 1638, 2037, 2069
MfeI	CAATTG	3 cut(s)	203, 876, 1233
MflI	RGATCY	3 cut(s)	1294, 1949, 2026
MhlI	GDGCHC	5 cut(s)	539, 652, 1396, 1748, 2081
MlsI	TGGCCA	1 cut(s)	1214
MluNI	TGGCCA	1 cut(s)	1214
MlyI	GAGTC	2 cut(s)	119, 1864
MmeI	TCCRAC	1 cut(s)	904
Mox20I	TGGCCA	1 cut(s)	1214
MroXI	GAANNNNTTC	3 cut(s)	773, 888, 2394
MscI	TGGCCA	1 cut(s)	1214
MseI	TTAA	7 cut(s)	113, 276, 962, 1227, 1368, 1848, 2411
Msp20I	TGGCCA	1 cut(s)	1214
MspA1I	CMGCKG	1 cut(s)	644
MspCI	CTTAAG	1 cut(s)	961
MspI	CCGG	3 cut(s)	1095, 1718, 2030
MspR9I	CCNGG	4 cut(s)	1508, 1718, 1719, 2031
MunI	CAATTG	3 cut(s)	203, 876, 1233
Mva1269I	GAATGC	1 cut(s)	134
MvaI	CCWGG	1 cut(s)	1508
MvnI	CGCG	1 cut(s)	814
NciI	CCSGG	3 cut(s)	1718, 1719, 2031
NcoI	CCATGG	1 cut(s)	2022
NdeII	GATC	6 cut(s)	91, 220, 1294, 1949, 2026, 2371
NlaIV	GGNNCC	5 cut(s)	804, 1296, 1488, 1745, 2028
NmuCI	GTSAC	4 cut(s)	952, 1439, 2116, 2356
NspI	RCATGY	1 cut(s)	970
NspV	TTCGAA	1 cut(s)	185
PagI	TCATGA	2 cut(s)	217, 2223
PciSI	GCTCTTC	1 cut(s)	1594
PctI	GAATGC	1 cut(s)	134
PdmI	GAANNNNTTC	3 cut(s)	773, 888, 2394
PfeI	GAWTC	4 cut(s)	212, 488, 1344, 1641
PflMI	CCANNNNNTGG	4 cut(s)	1178, 1436, 2276, 2368
PkrI	GCNGC	6 cut(s)	739, 1024, 1576, 1606, 1840, 2268
PleI	GAGTC	2 cut(s)	119, 1864
PmaCI	CACGTG	1 cut(s)	809
PmlI	CACGTG	1 cut(s)	809
PpsI	GAGTC	2 cut(s)	119, 1864
Ppu21I	YACGTR	1 cut(s)	809
PshBI	ATTAAT	1 cut(s)	1227
PsiI	TTATAA	1 cut(s)	525
Psp124BI	GAGCTC	1 cut(s)	1396
Psp6I	CCWGG	1 cut(s)	1506
PspCI	CACGTG	1 cut(s)	809
PspFI	CCCAGC	3 cut(s)	595, 644, 1001
PspGI	CCWGG	1 cut(s)	1506
PspN4I	GGNNCC	5 cut(s)	804, 1296, 1488, 1745, 2028
PspPI	GGNCC	8 cut(s)	584, 926, 1037, 1169, 1486, 1618, 1655, 1720
PstNI	CAGNNNCTG	1 cut(s)	1457
PsuI	RGATCY	3 cut(s)	1294, 1949, 2026
PvuII	CAGCTG	1 cut(s)	644
RsaI	GTAC	7 cut(s)	395, 1695, 1804, 1856, 2104, 2211, 2329
RsaNI	GTAC	7 cut(s)	394, 1694, 1803, 1855, 2103, 2210, 2328
SacI	GAGCTC	1 cut(s)	1396
SapI	GCTCTTC	1 cut(s)	1594
SaqAI	TTAA	7 cut(s)	113, 276, 962, 1227, 1368, 1848, 2411
SatI	GCNGC	6 cut(s)	738, 1023, 1575, 1605, 1839, 2267
Sau3AI	GATC	6 cut(s)	91, 220, 1294, 1949, 2026, 2371
Sau96I	GGNCC	8 cut(s)	584, 926, 1037, 1169, 1486, 1618, 1655, 1720
SchI	GAGTC	2 cut(s)	119, 1864
ScrFI	CCNGG	4 cut(s)	1508, 1718, 1719, 2031
SduI	GDGCHC	5 cut(s)	539, 652, 1396, 1748, 2081
SfaNI	GCATC	6 cut(s)	504, 691, 737, 1210, 1592, 1895
SfcI	CTRYAG	3 cut(s)	230, 256, 843
SfuI	TTCGAA	1 cut(s)	185
SinI	GGWCC	5 cut(s)	584, 926, 1169, 1486, 1655
SmaI	CCCGGG	1 cut(s)	1719
SmlI	CTYRAG	4 cut(s)	242, 410, 961, 2331
SmoI	CTYRAG	4 cut(s)	242, 410, 961, 2331
SsiI	CCGC	2 cut(s)	814, 1076
SspI	AATATT	1 cut(s)	553
SspMI	CTAG	7 cut(s)	653, 792, 911, 1299, 2036, 2256, 2339
SstI	GAGCTC	1 cut(s)	1396
StyD4I	CCNGG	4 cut(s)	1506, 1716, 1717, 2029
StyI	CCWWGG	4 cut(s)	1070, 1215, 1298, 2022
TaaI	ACNGT	5 cut(s)	176, 674, 847, 2116, 2287
TaiI	ACGT	5 cut(s)	285, 395, 454, 811, 2232
TaqI	TCGA	6 cut(s)	94, 185, 892, 994, 1033, 1649
TatI	WGTACW	3 cut(s)	1693, 1854, 2102
TfiI	GAWTC	4 cut(s)	212, 488, 1344, 1641
Tru1I	TTAA	7 cut(s)	113, 276, 962, 1227, 1368, 1848, 2411
Tru9I	TTAA	7 cut(s)	113, 276, 962, 1227, 1368, 1848, 2411
TscAI	CASTG	4 cut(s)	181, 684, 1797, 2125
TseFI	GTSAC	4 cut(s)	952, 1439, 2116, 2356
TseI	GCWGC	6 cut(s)	737, 1022, 1574, 1604, 1838, 2266
Tsp45I	GTSAC	4 cut(s)	952, 1439, 2116, 2356
TspMI	CCCGGG	1 cut(s)	1717
TspRI	CASTG	4 cut(s)	181, 684, 1797, 2125
Van91I	CCANNNNNTGG	4 cut(s)	1178, 1436, 2276, 2368
Vha464I	CTTAAG	1 cut(s)	961
VpaK11BI	GGWCC	5 cut(s)	584, 926, 1169, 1486, 1655
VspI	ATTAAT	1 cut(s)	1227
XagI	CCTNNNNNAGG	1 cut(s)	846
XapI	RAATTY	2 cut(s)	180, 1107
XceI	RCATGY	1 cut(s)	970
XcmI	CCANNNNNNNNNTGG	1 cut(s)	455
XmaI	CCCGGG	1 cut(s)	1717
XmaJI	CCTAGG	1 cut(s)	1298
XmiI	GTMKAC	1 cut(s)	2289
XmnI	GAANNNNTTC	3 cut(s)	773, 888, 2394
XspI	CTAG	7 cut(s)	653, 792, 911, 1299, 2036, 2256, 2339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.