Auxin responsive protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 797 |
| Acc65I | GGTACC | 1 cut(s) | 1636 |
| AccB1I | GGYRCC | 2 cut(s) | 1043, 1636 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 483 |
| AccBSI | CCGCTC | 1 cut(s) | 1786 |
| AccI | GTMKAC | 2 cut(s) | 373, 2043 |
| AciI | CCGC | 4 cut(s) | 1684, 1716, 1786, 1801 |
| AclWI | GGATC | 5 cut(s) | 57, 227, 547, 614, 2018 |
| AcsI | RAATTY | 4 cut(s) | 117, 785, 1816, 2237 |
| AfeI | AGCGCT | 1 cut(s) | 1559 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 32, 163, 483, 1622, 1646, 1848, 1939 |
| AflIII | ACRYGT | 2 cut(s) | 962, 1824 |
| AgsI | TTSAA | 5 cut(s) | 152, 775, 1590, 2167, 2338 |
| AjnI | CCWGG | 5 cut(s) | 218, 402, 1639, 2136, 2222 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1476, 1508 |
| Alw21I | GWGCWC | 3 cut(s) | 515, 738, 2196 |
| Alw26I | GTCTC | 1 cut(s) | 2336 |
| Alw44I | GTGCAC | 1 cut(s) | 2192 |
| AlwI | GGATC | 5 cut(s) | 57, 227, 547, 614, 2018 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1955 |
| Ama87I | CYCGRG | 1 cut(s) | 236 |
| Aor51HI | AGCGCT | 1 cut(s) | 1559 |
| AoxI | GGCC | 5 cut(s) | 81, 1079, 1125, 1648, 2002 |
| ApaLI | GTGCAC | 1 cut(s) | 2192 |
| ApeKI | GCWGC | 8 cut(s) | 55, 139, 467, 1007, 1103, 1106, 1511, 2133 |
| ApoI | RAATTY | 4 cut(s) | 117, 785, 1816, 2237 |
| Asp718I | GGTACC | 1 cut(s) | 1636 |
| AspLEI | GCGC | 2 cut(s) | 1560, 2099 |
| AspS9I | GGNCC | 3 cut(s) | 23, 1613, 1808 |
| AsuHPI | GGTGA | 5 cut(s) | 464, 562, 1214, 1360, 1696 |
| AsuNHI | GCTAGC | 1 cut(s) | 1666 |
| AvaI | CYCGRG | 1 cut(s) | 236 |
| AvaII | GGWCC | 3 cut(s) | 23, 1613, 1808 |
| BaeGI | GKGCMC | 2 cut(s) | 1448, 2196 |
| BanI | GGYRCC | 2 cut(s) | 1043, 1636 |
| BbsI | GAAGAC | 1 cut(s) | 193 |
| Bbv12I | GWGCWC | 3 cut(s) | 515, 738, 2196 |
| BbvI | GCAGC | 8 cut(s) | 67, 151, 454, 994, 1090, 1093, 1523, 2145 |
| BccI | CCATC | 7 cut(s) | 477, 554, 851, 949, 1930, 1994, 2130 |
| BceAI | ACGGC | 2 cut(s) | 1259, 1341 |
| BciT130I | CCWGG | 5 cut(s) | 220, 404, 1641, 2138, 2224 |
| BclI | TGATCA | 2 cut(s) | 61, 1030 |
| BcoDI | GTCTC | 1 cut(s) | 2336 |
| BfaI | CTAG | 2 cut(s) | 1667, 1965 |
| BfmI | CTRYAG | 3 cut(s) | 137, 316, 2211 |
| BfoI | RGCGCY | 1 cut(s) | 1561 |
| BglII | AGATCT | 1 cut(s) | 1858 |
| BisI | GCNGC | 8 cut(s) | 56, 140, 468, 1008, 1104, 1107, 1512, 2134 |
| BlsI | GCNGC | 8 cut(s) | 57, 141, 469, 1009, 1105, 1108, 1513, 2135 |
| Bme1390I | CCNGG | 5 cut(s) | 220, 404, 1641, 2138, 2224 |
| Bme18I | GGWCC | 3 cut(s) | 23, 1613, 1808 |
| BmeT110I | CYCGRG | 1 cut(s) | 236 |
| BmgT120I | GGNCC | 3 cut(s) | 23, 1613, 1808 |
| BmiI | GGNNCC | 7 cut(s) | 25, 1045, 1494, 1615, 1638, 1790, 1810 |
| BmrFI | CCNGG | 5 cut(s) | 220, 404, 1641, 2138, 2224 |
| BmrI | ACTGGG | 3 cut(s) | 929, 1611, 2210 |
| BmsI | GCATC | 4 cut(s) | 1695, 1952, 2066, 2170 |
| BmtI | GCTAGC | 1 cut(s) | 1670 |
| BmuI | ACTGGG | 3 cut(s) | 929, 1611, 2210 |
| BoxI | GACNNNNGTC | 1 cut(s) | 333 |
| BpiI | GAAGAC | 1 cut(s) | 193 |
| BpmI | CTGGAG | 1 cut(s) | 558 |
| BpuEI | CTTGAG | 2 cut(s) | 1454, 1946 |
| Bsa29I | ATCGAT | 2 cut(s) | 832, 2148 |
| BsaJI | CCNNGG | 5 cut(s) | 157, 218, 219, 237, 694 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 27, 57, 1476, 1506 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 32, 163, 483, 1622, 1646, 1848, 1939 |
| Bse1I | ACTGG | 6 cut(s) | 25, 672, 935, 1617, 1632, 2205 |
| Bse3DI | GCAATG | 2 cut(s) | 1269, 1355 |
| BseBI | CCWGG | 5 cut(s) | 220, 404, 1641, 2138, 2224 |
| BseCI | ATCGAT | 2 cut(s) | 832, 2148 |
| BseDI | CCNNGG | 5 cut(s) | 157, 218, 219, 237, 694 |
| BseGI | GGATG | 1 cut(s) | 79 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 32, 163, 483, 1622, 1646, 1848, 1939 |
| BseMI | GCAATG | 2 cut(s) | 1269, 1355 |
| BseMII | CTCAG | 2 cut(s) | 901, 1653 |
| BseNI | ACTGG | 6 cut(s) | 25, 672, 935, 1617, 1632, 2205 |
| BseRI | GAGGAG | 4 cut(s) | 92, 434, 728, 1457 |
| BseSI | GKGCMC | 2 cut(s) | 1448, 2196 |
| BseXI | GCAGC | 8 cut(s) | 67, 151, 454, 994, 1090, 1093, 1523, 2145 |
| BseYI | CCCAGC | 2 cut(s) | 1283, 1488 |
| BshFI | GGCC | 5 cut(s) | 83, 1081, 1127, 1650, 2004 |
| BshNI | GGYRCC | 2 cut(s) | 1043, 1636 |
| BshVI | ATCGAT | 2 cut(s) | 832, 2148 |
| BsiHKAI | GWGCWC | 3 cut(s) | 515, 738, 2196 |
| BsiHKCI | CYCGRG | 1 cut(s) | 236 |
| BsiSI | CCGG | 1 cut(s) | 1921 |
| BslFI | GGGAC | 9 cut(s) | 9, 507, 910, 923, 1336, 1599, 1757, 1915, 2078 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 32, 163, 483, 1622, 1646, 1848, 1939 |
| BsmAI | GTCTC | 1 cut(s) | 2336 |
| BsmFI | GGGAC | 9 cut(s) | 9, 507, 910, 923, 1336, 1599, 1757, 1915, 2078 |
| BsnI | GGCC | 5 cut(s) | 83, 1081, 1127, 1650, 2004 |
| BsoBI | CYCGRG | 1 cut(s) | 236 |
| Bsp1286I | GDGCHC | 4 cut(s) | 515, 738, 1448, 2196 |
| Bsp1407I | TGTACA | 3 cut(s) | 1198, 1656, 1766 |
| Bsp143I | GATC | 9 cut(s) | 49, 61, 232, 539, 606, 1030, 1858, 2023, 2145 |
| BspACI | CCGC | 4 cut(s) | 1684, 1716, 1786, 1801 |
| BspANI | GGCC | 5 cut(s) | 83, 1081, 1127, 1650, 2004 |
| BspCNI | CTCAG | 2 cut(s) | 900, 1654 |
| BspDI | ATCGAT | 2 cut(s) | 832, 2148 |
| BspHI | TCATGA | 3 cut(s) | 1017, 1374, 2323 |
| BspLI | GGNNCC | 7 cut(s) | 25, 1045, 1494, 1615, 1638, 1790, 1810 |
| BspMAI | CTGCAG | 1 cut(s) | 141 |
| BspOI | GCTAGC | 1 cut(s) | 1670 |
| BspPI | GGATC | 5 cut(s) | 57, 227, 547, 614, 2018 |
| BspQI | GCTCTTC | 3 cut(s) | 445, 503, 1776 |
| BspT107I | GGYRCC | 2 cut(s) | 1043, 1636 |
| BsrBI | CCGCTC | 1 cut(s) | 1786 |
| BsrDI | GCAATG | 2 cut(s) | 1269, 1355 |
| BsrGI | TGTACA | 3 cut(s) | 1198, 1656, 1766 |
| BsrI | ACTGG | 6 cut(s) | 25, 672, 935, 1617, 1632, 2205 |
| BssECI | CCNNGG | 5 cut(s) | 157, 218, 219, 237, 694 |
| BssMI | GATC | 9 cut(s) | 49, 61, 232, 539, 606, 1030, 1858, 2023, 2145 |
| BssT1I | CCWWGG | 1 cut(s) | 157 |
| Bst2UI | CCWGG | 5 cut(s) | 220, 404, 1641, 2138, 2224 |
| Bst4CI | ACNGT | 9 cut(s) | 698, 1043, 1070, 1220, 1552, 1580, 1771, 2174, 2212 |
| Bst6I | CTCTTC | 3 cut(s) | 445, 503, 1776 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 914, 1145, 2105 |
| BstAUI | TGTACA | 3 cut(s) | 1198, 1656, 1766 |
| BstC8I | GCNNGC | 5 cut(s) | 144, 1161, 1668, 2079, 2131 |
| BstDEI | CTNAG | 5 cut(s) | 92, 887, 1662, 1986, 2279 |
| BstDSI | CCRYGG | 1 cut(s) | 694 |
| BstEII | GGTNACC | 1 cut(s) | 1348 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1644, 1937 |
| BstF5I | GGATG | 1 cut(s) | 79 |
| BstH2I | RGCGCY | 1 cut(s) | 1561 |
| BstHHI | GCGC | 2 cut(s) | 1560, 2099 |
| BstKTI | GATC | 9 cut(s) | 52, 64, 235, 542, 609, 1033, 1861, 2026, 2148 |
| BstMAI | GTCTC | 1 cut(s) | 2336 |
| BstMBI | GATC | 9 cut(s) | 49, 61, 232, 539, 606, 1030, 1858, 2023, 2145 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 64, 914, 1103, 1115, 1124, 1145, 1280, 1987, 2105 |
| BstNI | CCWGG | 5 cut(s) | 220, 404, 1641, 2138, 2224 |
| BstNSI | RCATGY | 5 cut(s) | 380, 500, 772, 966, 1828 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 333 |
| BstPI | GGTNACC | 1 cut(s) | 1348 |
| BstSCI | CCNGG | 5 cut(s) | 218, 402, 1639, 2136, 2222 |
| BstSFI | CTRYAG | 3 cut(s) | 137, 316, 2211 |
| BstSLI | GKGCMC | 2 cut(s) | 1448, 2196 |
| BstV1I | GCAGC | 8 cut(s) | 67, 151, 454, 994, 1090, 1093, 1523, 2145 |
| BstV2I | GAAGAC | 1 cut(s) | 193 |
| BstX2I | RGATCY | 2 cut(s) | 539, 1858 |
| BstYI | RGATCY | 2 cut(s) | 539, 1858 |
| Bsu15I | ATCGAT | 2 cut(s) | 832, 2148 |
| BsuRI | GGCC | 5 cut(s) | 83, 1081, 1127, 1650, 2004 |
| BsuTUI | ATCGAT | 2 cut(s) | 832, 2148 |
| BtgI | CCRYGG | 1 cut(s) | 694 |
| BtsCI | GGATG | 1 cut(s) | 79 |
| BtsI | GCAGTG | 1 cut(s) | 1390 |
| BtsIMutI | CAGTG | 2 cut(s) | 1390, 1659 |
| Cac8I | GCNNGC | 5 cut(s) | 144, 1161, 1668, 2079, 2131 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1955 |
| CciI | TCATGA | 3 cut(s) | 1017, 1374, 2323 |
| CfoI | GCGC | 2 cut(s) | 1560, 2099 |
| Cfr13I | GGNCC | 3 cut(s) | 23, 1613, 1808 |
| ClaI | ATCGAT | 2 cut(s) | 832, 2148 |
| CsiI | ACCWGGT | 1 cut(s) | 1639 |
| DdeI | CTNAG | 5 cut(s) | 92, 887, 1662, 1986, 2279 |
| DpnI | GATC | 9 cut(s) | 51, 63, 234, 541, 608, 1032, 1860, 2025, 2147 |
| DpnII | GATC | 9 cut(s) | 49, 61, 232, 539, 606, 1030, 1858, 2023, 2145 |
| DraI | TTTAAA | 1 cut(s) | 1291 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 797 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 797 |
| Eam1104I | CTCTTC | 3 cut(s) | 445, 503, 1776 |
| EarI | CTCTTC | 3 cut(s) | 445, 503, 1776 |
| Eco130I | CCWWGG | 1 cut(s) | 157 |
| Eco147I | AGGCCT | 1 cut(s) | 1650 |
| Eco32I | GATATC | 2 cut(s) | 1506, 2115 |
| Eco47I | GGWCC | 3 cut(s) | 23, 1613, 1808 |
| Eco47III | AGCGCT | 1 cut(s) | 1559 |
| Eco88I | CYCGRG | 1 cut(s) | 236 |
| Eco91I | GGTNACC | 1 cut(s) | 1348 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1644, 1937 |
| EcoO65I | GGTNACC | 1 cut(s) | 1348 |
| EcoRII | CCWGG | 5 cut(s) | 218, 402, 1639, 2136, 2222 |
| EcoRV | GATATC | 2 cut(s) | 1506, 2115 |
| EcoT14I | CCWWGG | 1 cut(s) | 157 |
| EcoT22I | ATGCAT | 2 cut(s) | 502, 2275 |
| ErhI | CCWWGG | 1 cut(s) | 157 |
| FaqI | GGGAC | 9 cut(s) | 9, 507, 910, 923, 1336, 1599, 1757, 1915, 2078 |
| FauI | CCCGC | 2 cut(s) | 1691, 1723 |
| FbaI | TGATCA | 2 cut(s) | 61, 1030 |
| FblI | GTMKAC | 2 cut(s) | 373, 2043 |
| Fnu4HI | GCNGC | 8 cut(s) | 56, 140, 468, 1008, 1104, 1107, 1512, 2134 |
| FokI | GGATG | 1 cut(s) | 86 |
| Fsp4HI | GCNGC | 8 cut(s) | 56, 140, 468, 1008, 1104, 1107, 1512, 2134 |
| FspBI | CTAG | 2 cut(s) | 1667, 1965 |
| GlaI | GCGC | 2 cut(s) | 1559, 2098 |
| GluI | GCNGC | 8 cut(s) | 56, 140, 468, 1008, 1104, 1107, 1512, 2134 |
| GsaI | CCCAGC | 2 cut(s) | 1287, 1492 |
| GsuI | CTGGAG | 1 cut(s) | 558 |
| HaeII | RGCGCY | 1 cut(s) | 1561 |
| HaeIII | GGCC | 5 cut(s) | 83, 1081, 1127, 1650, 2004 |
| HapII | CCGG | 1 cut(s) | 1921 |
| HhaI | GCGC | 2 cut(s) | 1560, 2099 |
| Hin6I | GCGC | 2 cut(s) | 1558, 2097 |
| HinP1I | GCGC | 2 cut(s) | 1558, 2097 |
| HincII | GTYRAC | 1 cut(s) | 374 |
| HindII | GTYRAC | 1 cut(s) | 374 |
| HinfI | GANTC | 9 cut(s) | 565, 1120, 1188, 1600, 1928, 1952, 2066, 2084, 2329 |
| HpaII | CCGG | 1 cut(s) | 1921 |
| HphI | GGTGA | 5 cut(s) | 464, 562, 1214, 1360, 1696 |
| Hpy188I | TCNGA | 4 cut(s) | 627, 1030, 1951, 1957 |
| HpyAV | CCTTC | 4 cut(s) | 838, 987, 992, 1766 |
| HpyCH4III | ACNGT | 9 cut(s) | 698, 1043, 1070, 1220, 1552, 1580, 1771, 2174, 2212 |
| HpyCH4IV | ACGT | 2 cut(s) | 798, 1205 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 64, 914, 1103, 1115, 1124, 1145, 1280, 1987, 2105 |
| HpyF3I | CTNAG | 5 cut(s) | 92, 887, 1662, 1986, 2279 |
| HpySE526I | ACGT | 2 cut(s) | 798, 1205 |
| HspAI | GCGC | 2 cut(s) | 1558, 2097 |
| KpnI | GGTACC | 1 cut(s) | 1640 |
| Ksp22I | TGATCA | 2 cut(s) | 61, 1030 |
| Kzo9I | GATC | 9 cut(s) | 49, 61, 232, 539, 606, 1030, 1858, 2023, 2145 |
| LguI | GCTCTTC | 3 cut(s) | 445, 503, 1776 |
| LmnI | GCTCC | 3 cut(s) | 251, 421, 741 |
| Lsp1109I | GCAGC | 8 cut(s) | 67, 151, 454, 994, 1090, 1093, 1523, 2145 |
| LweI | GCATC | 4 cut(s) | 1695, 1952, 2066, 2170 |
| MabI | ACCWGGT | 1 cut(s) | 1639 |
| MaeI | CTAG | 2 cut(s) | 1667, 1965 |
| MaeII | ACGT | 2 cut(s) | 798, 1205 |
| MaeIII | GTNAC | 5 cut(s) | 363, 617, 1220, 1276, 1348 |
| MalI | GATC | 9 cut(s) | 51, 63, 234, 541, 608, 1032, 1860, 2025, 2147 |
| MbiI | CCGCTC | 1 cut(s) | 1786 |
| MboI | GATC | 9 cut(s) | 49, 61, 232, 539, 606, 1030, 1858, 2023, 2145 |
| MfeI | CAATTG | 1 cut(s) | 729 |
| MflI | RGATCY | 2 cut(s) | 539, 1858 |
| MhlI | GDGCHC | 4 cut(s) | 515, 738, 1448, 2196 |
| MlyI | GAGTC | 6 cut(s) | 1129, 1197, 1937, 1946, 2060, 2338 |
| MmeI | TCCRAC | 1 cut(s) | 468 |
| Mph1103I | ATGCAT | 2 cut(s) | 502, 2275 |
| MseI | TTAA | 7 cut(s) | 245, 803, 840, 1155, 1245, 1290, 2313 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1274 |
| MspA1I | CMGCKG | 2 cut(s) | 1283, 2081 |
| MspI | CCGG | 1 cut(s) | 1921 |
| MspR9I | CCNGG | 5 cut(s) | 220, 404, 1641, 2138, 2224 |
| MunI | CAATTG | 1 cut(s) | 729 |
| MvaI | CCWGG | 5 cut(s) | 220, 404, 1641, 2138, 2224 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 64, 914, 1103, 1115, 1124, 1145, 1280, 1987, 2105 |
| NdeII | GATC | 9 cut(s) | 49, 61, 232, 539, 606, 1030, 1858, 2023, 2145 |
| NheI | GCTAGC | 1 cut(s) | 1666 |
| NlaIV | GGNNCC | 7 cut(s) | 25, 1045, 1494, 1615, 1638, 1790, 1810 |
| NmuCI | GTSAC | 4 cut(s) | 617, 1220, 1276, 1348 |
| NsiI | ATGCAT | 2 cut(s) | 502, 2275 |
| NspI | RCATGY | 5 cut(s) | 380, 500, 772, 966, 1828 |
| PagI | TCATGA | 3 cut(s) | 1017, 1374, 2323 |
| PasI | CCCWGGG | 1 cut(s) | 219 |
| PceI | AGGCCT | 1 cut(s) | 1650 |
| PciI | ACATGT | 2 cut(s) | 962, 1824 |
| PciSI | GCTCTTC | 3 cut(s) | 445, 503, 1776 |
| PfeI | GAWTC | 3 cut(s) | 565, 1600, 2084 |
| PflFI | GACNNNGTC | 1 cut(s) | 1611 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 483 |
| PkrI | GCNGC | 8 cut(s) | 57, 141, 469, 1009, 1105, 1108, 1513, 2135 |
| PleI | GAGTC | 6 cut(s) | 1128, 1196, 1936, 1946, 2060, 2337 |
| PpsI | GAGTC | 6 cut(s) | 1128, 1196, 1936, 1946, 2060, 2337 |
| PscI | ACATGT | 2 cut(s) | 962, 1824 |
| PshAI | GACNNNNGTC | 1 cut(s) | 333 |
| Psp6I | CCWGG | 5 cut(s) | 218, 402, 1639, 2136, 2222 |
| PspEI | GGTNACC | 1 cut(s) | 1348 |
| PspFI | CCCAGC | 2 cut(s) | 1283, 1488 |
| PspGI | CCWGG | 5 cut(s) | 218, 402, 1639, 2136, 2222 |
| PspN4I | GGNNCC | 7 cut(s) | 25, 1045, 1494, 1615, 1638, 1790, 1810 |
| PspPI | GGNCC | 3 cut(s) | 23, 1613, 1808 |
| PstI | CTGCAG | 1 cut(s) | 141 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1955 |
| PsuI | RGATCY | 2 cut(s) | 539, 1858 |
| PsyI | GACNNNGTC | 1 cut(s) | 1611 |
| PvuII | CAGCTG | 2 cut(s) | 1283, 2081 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1274 |
| SalI | GTCGAC | 1 cut(s) | 372 |
| SapI | GCTCTTC | 3 cut(s) | 445, 503, 1776 |
| SaqAI | TTAA | 7 cut(s) | 245, 803, 840, 1155, 1245, 1290, 2313 |
| SatI | GCNGC | 8 cut(s) | 56, 140, 468, 1008, 1104, 1107, 1512, 2134 |
| Sau3AI | GATC | 9 cut(s) | 49, 61, 232, 539, 606, 1030, 1858, 2023, 2145 |
| Sau96I | GGNCC | 3 cut(s) | 23, 1613, 1808 |
| SchI | GAGTC | 6 cut(s) | 1129, 1197, 1937, 1946, 2060, 2338 |
| ScrFI | CCNGG | 5 cut(s) | 220, 404, 1641, 2138, 2224 |
| SduI | GDGCHC | 4 cut(s) | 515, 738, 1448, 2196 |
| SexAI | ACCWGGT | 1 cut(s) | 1639 |
| SfaNI | GCATC | 4 cut(s) | 1695, 1952, 2066, 2170 |
| SfcI | CTRYAG | 3 cut(s) | 137, 316, 2211 |
| SinI | GGWCC | 3 cut(s) | 23, 1613, 1808 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1274 |
| SmlI | CTYRAG | 2 cut(s) | 1469, 1925 |
| SmoI | CTYRAG | 2 cut(s) | 1469, 1925 |
| SseBI | AGGCCT | 1 cut(s) | 1650 |
| SsiI | CCGC | 4 cut(s) | 1684, 1716, 1786, 1801 |
| SspI | AATATT | 1 cut(s) | 2038 |
| SspMI | CTAG | 2 cut(s) | 1667, 1965 |
| StuI | AGGCCT | 1 cut(s) | 1650 |
| StyD4I | CCNGG | 5 cut(s) | 218, 402, 1639, 2136, 2222 |
| StyI | CCWWGG | 1 cut(s) | 157 |
| TaaI | ACNGT | 9 cut(s) | 698, 1043, 1070, 1220, 1552, 1580, 1771, 2174, 2212 |
| TaiI | ACGT | 2 cut(s) | 801, 1208 |
| TaqI | TCGA | 4 cut(s) | 122, 373, 832, 2148 |
| TatI | WGTACW | 4 cut(s) | 1198, 1462, 1656, 1766 |
| TfiI | GAWTC | 3 cut(s) | 565, 1600, 2084 |
| Tru1I | TTAA | 7 cut(s) | 245, 803, 840, 1155, 1245, 1290, 2313 |
| Tru9I | TTAA | 7 cut(s) | 245, 803, 840, 1155, 1245, 1290, 2313 |
| TscAI | CASTG | 2 cut(s) | 1397, 1666 |
| TseFI | GTSAC | 4 cut(s) | 617, 1220, 1276, 1348 |
| TseI | GCWGC | 8 cut(s) | 55, 139, 467, 1007, 1103, 1106, 1511, 2133 |
| Tsp45I | GTSAC | 4 cut(s) | 617, 1220, 1276, 1348 |
| TspDTI | ATGAA | 6 cut(s) | 27, 521, 1034, 1712, 1900, 2079 |
| TspGWI | ACGGA | 2 cut(s) | 605, 1820 |
| TspRI | CASTG | 2 cut(s) | 1397, 1666 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1611 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 483 |
| VneI | GTGCAC | 1 cut(s) | 2192 |
| VpaK11BI | GGWCC | 3 cut(s) | 23, 1613, 1808 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1644, 1937 |
| XapI | RAATTY | 4 cut(s) | 117, 785, 1816, 2237 |
| XceI | RCATGY | 5 cut(s) | 380, 500, 772, 966, 1828 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 484, 1245, 1624 |
| XmiI | GTMKAC | 2 cut(s) | 373, 2043 |
| XspI | CTAG | 2 cut(s) | 1667, 1965 |
| Zsp2I | ATGCAT | 2 cut(s) | 502, 2275 |