Rorug05G0474600

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
65193756 .. 65199836
6081 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0474600.1

Sequence Viewer

Length: 2430 bp
ATGATTTTTTCAAGGATTGGTCGCTCCTTATCTCGATCCTCTCGCTCCAGAAATTTGCTTTCTCGAAATGGGCGATCGGCGGCGGCTGAAGGGCTTTTGGGAGTGCCGGGTTCGGGTTCGTATCTGGGTCGGGTCGATGGGGATTTAGGGTTTATGAGGACCTATATTGCTTCGGCAATAGGAGCGCACAAGACCCATGTTTCTGATTTGAGTTACATTCTAGGGAACCCTAAATTTGTGAGACTGTTTTCCAGTGAAGCCCCTAAGAAAAAGAATTTTGAGAACTTTTATCCCAAGGAAAAGAAAGAAATCCCGAAAGGGAATGATCAGAAATCCGAGTCCAAAGAGGAGTCGAGCACAGATGACCAGGGGAGTTTCCAGGAAACTTTCTTAAAGCAGTTCCAGAATTTAGTCCCTTTATTATTGATTGGGCTATTTTTCTCTTCATTTTCTTTTGGCTCCAGTGAACAGAAACAGATAAGTTTCCAAGAGTTTAAAAACAAACTTCTGGAACCTGGTTTGGTCGATCATATAGTTGTTTCTAATAAATCAGTTGCAAAAGTATTTGTACGTACCTCACCACGCAGTCAAACAAGTGATGAAGTTGTCGAAGGAACTATTAATGGTACCGCTGCTCGTGGAAAAGGGGGCGAGTATAAGTACTTCTTCAATATTGGAAGTGTTGAAAATTTTGAGGAGAAGTTGGAGGATGCCCAGGAAGCTCTGGGGATAGATTCTCATGATTATGTTCCTGTTACATATGTCTCTGAAATGGTTTGGTATCAAGAATTGATGAGGTTTGCACCAACATTAATCCTTCTGGGAACCCTCTTGTATATGGGGAGGAGAATGCAGGGTGGACTAGGCATTGGTGGTGGTTCTGGTGGCCGGAGTGGTCGTGGAATATTCAACATAGGAAAAGCCCATGTTACAAAAGTAGATAAAAATGCAAAGAATAAGATCTACTTTAAAGATGTTGCCGGTTGCGATGAAGCAAAGCAGGAGATCATGGAATTTGTGCATTTTCTAAAGAACCCTAAGAAGTATGAGGATTTGGGAGCCAAAATTCCCAAAGGTGCTCTATTGGTAGGTCCTCCAGGCACAGGAAAGACCCTTCTAGCAAAAGCAACAGCAGGGGAATCTGGTGTACCTTTCCTATCTATATCTGGATCAGATTTCATGGAGATGTTTGTTGGTGTTGGACCTTCCAGAGTGAGAAACTTGTTTCAAGAAGCAAGGCAATGTGCTCCTAGTATTATATTTATTGATGAGATTGATGCAATTGGTCGAGCAAGGGGGCGTGGGGGCTTCTCAGGGTCCAATGATGAGCGTGAAAGCACTCTAAATCAATTGCTGGTAGAAATGGATGGCTTTGGAACAACTGCTGGAGTAGTTGTGCTTGCTGGAACCAATAGACCTGATATTTTGGACAAAGCCTTACTAAGGCCTGGTCGATTTGATCGTCAGATTAGCATAGACAAACCTGATATTAAAGGTCGTGATCAGATTTTTCAGATATACTTGAAAAAACTCAAACTTGATCAGGAGCCGTCATTTTACTCTCAAAGGCTTGCAGCTCTGACTCCAGGATTTGCTGGAGCAGACATTGCCAATGTTTGTAATGAAGGTGCTTTAATTGCTGCCAGGAATGAAAGTGCACTAATCACGATGCAGCATTTTGAGTCGGCTATAGATAGGATAATTGGTGGTCTGGAAAAGAAGAACAGGGTTATTAGCAAGCTTGAACGCCGCACTGTTGCCTACCATGAGTCAGGGCATGCTGTAGCAGGATGGTTCTTAGAGCATGCAGAACCTTTGCTAAAAGTGACCATCGTTCCTCGAGGTACAGCAGCACTTGGGTTTGCCCAGTATGTTCCAAATGAAAACCTTCTTATGACCAAGGAGCAGCTTTTTGATATGACTTGCATGACCCTTGGTGGTAGAGCAGCTGAACAGGTTCTGTTGGGAAAAATTTCGACGGGAGCCCAAAACGATTTGGAAAAGGTGACAAAGATGACGTATGCCCAAGTTGCAGTTTATGGTTTTAGTGACAAGGTGGGTCTTCTTTCTTTCCCTCAAAGAGATGACGGGTTTGAGATGTCAAAGCCCTACAGCAGCAAGACTGCAGCCCTTATTGACGGTGAAGTACGCGAATGGGTGGGCAAGGCTTATGCGCACACACTTGCACTCCTAGAAGAACACAAAGATCAAGTGGCTCAAATTGCAGAATTGTTGCTGGAAAAGGAAGTTCTTCACCAAGATGACCTTCTCAGGGTTTTGGGAGAGAGACCATACAAGTCAAGTGAAGTGAGCAATTATGATAGATTTAAGCAAGGTTTTGAAGATGAGAAAACTGTTGAGGTCCCCGTTAGTGTCGGGCATGAGGAAGACGGCTCTTCACCTCTAGAGCCTCAGGTTCTCCCTACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

809

Amino Acids

88.98

Weight (kDa)

6.59

Isoelectric Point (pI)

33.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FtsH_ext PF06480 138 - 247 1.4e-13 FtsH Extracellular
AAA PF00004 361 - 493 8.8e-43 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 523 - 561 1.3e-10 AAA+ lid domain
Peptidase_M41 PF01434 576 - 758 5.3e-65 Peptidase family M41
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 1839
Acc16I TGCGCA 1 cut(s) 2175
Acc65I GGTACC 1 cut(s) 626
AccB1I GGYRCC 1 cut(s) 626
AccII CGCG 1 cut(s) 2151
AciI CCGC 4 cut(s) 80, 83, 630, 1750
AclWI GGATC 2 cut(s) 30, 1177
AcoI YGGCCR 1 cut(s) 886
AcsI RAATTY 8 cut(s) 52, 233, 274, 406, 688, 1013, 1065, 1971
AcuI CTGAAG 1 cut(s) 108
AfaI GTAC 7 cut(s) 570, 574, 628, 662, 1149, 1846, 2148
AfiI CCNNNNNNNGG 4 cut(s) 113, 1103, 1443, 2272
AgsI TTSAA 8 cut(s) 12, 670, 686, 910, 1229, 1525, 1745, 2342
AjnI CCWGG 8 cut(s) 366, 378, 514, 714, 1096, 1447, 1585, 1643
AjuI GAANNNNNNNTTGG 2 cut(s) 2250, 2282
AluBI AGCT 5 cut(s) 722, 1577, 1741, 1909, 1949
AluI AGCT 5 cut(s) 722, 1577, 1741, 1909, 1949
Alw21I GWGCWC 4 cut(s) 359, 1081, 1249, 1660
Alw26I GTCTC 3 cut(s) 235, 769, 2281
Alw44I GTGCAC 1 cut(s) 1656
AlwI GGATC 2 cut(s) 30, 1177
AlwNI CAGNNNCTG 1 cut(s) 1960
Ama87I CYCGRG 1 cut(s) 1839
AoxI GGCC 2 cut(s) 886, 1445
ApaLI GTGCAC 1 cut(s) 1656
ApeKI GCWGC 9 cut(s) 632, 1574, 1640, 1672, 1850, 1906, 1946, 2115, 2126
ApoI RAATTY 8 cut(s) 52, 233, 274, 406, 688, 1013, 1065, 1971
AseI ATTAAT 2 cut(s) 621, 812
Asp700I GAANNNNTTC 4 cut(s) 1887, 1956, 1972, 2250
Asp718I GGTACC 1 cut(s) 626
AspLEI GCGC 2 cut(s) 187, 2176
AspS9I GGNCC 5 cut(s) 159, 1091, 1202, 1317, 2362
AsuC2I CCSGG 1 cut(s) 108
AsuHPI GGTGA 5 cut(s) 570, 2017, 2153, 2246, 2391
AvaI CYCGRG 1 cut(s) 1839
AvaII GGWCC 5 cut(s) 159, 1091, 1202, 1317, 2362
AxyI CCTNAGG 1 cut(s) 2412
BaeGI GKGCMC 1 cut(s) 1660
BanI GGYRCC 1 cut(s) 626
BanII GRGCYC 1 cut(s) 1987
BarI GAAGNNNNNNTAC 2 cut(s) 647, 679
BauI CACGAG 1 cut(s) 636
BbsI GAAGAC 2 cut(s) 2054, 2394
Bbv12I GWGCWC 4 cut(s) 359, 1081, 1249, 1660
BbvI GCAGC 9 cut(s) 619, 1586, 1627, 1684, 1862, 1918, 1958, 2127, 2138
BccI CCATC 4 cut(s) 131, 1361, 1785, 1838
BceAI ACGGC 2 cut(s) 1534, 2407
BciT130I CCWGG 8 cut(s) 368, 380, 516, 716, 1098, 1449, 1587, 1645
BclI TGATCA 3 cut(s) 325, 1501, 1540
BcnI CCSGG 1 cut(s) 108
BcoDI GTCTC 3 cut(s) 235, 769, 2281
BfaI CTAG 6 cut(s) 221, 863, 1118, 1251, 2192, 2405
BfmI CTRYAG 4 cut(s) 1689, 1782, 2110, 2124
BglII AGATCT 1 cut(s) 960
BmcAI AGTACT 1 cut(s) 662
Bme1390I CCNGG 9 cut(s) 108, 368, 380, 516, 716, 1098, 1449, 1587, 1645
Bme18I GGWCC 5 cut(s) 159, 1091, 1202, 1317, 2362
BmeT110I CYCGRG 1 cut(s) 1839
BmgT120I GGNCC 5 cut(s) 159, 1091, 1202, 1317, 2362
BmrFI CCNGG 9 cut(s) 108, 368, 380, 516, 716, 1098, 1449, 1587, 1645
BmrI ACTGGG 1 cut(s) 1861
BmsI GCATC 3 cut(s) 700, 1267, 1659
BmuI ACTGGG 1 cut(s) 1861
BpiI GAAGAC 2 cut(s) 2054, 2394
BpmI CTGGAG 6 cut(s) 31, 445, 1080, 1407, 1569, 1617
BpuMI CCSGG 1 cut(s) 108
BsaAI YACGTR 1 cut(s) 572
BsaI GGTCTC 1 cut(s) 2281
BsaJI CCNNGG 5 cut(s) 294, 367, 714, 1899, 1933
BsaXI ACNNNNNCTCC 6 cut(s) 883, 913, 1380, 1410, 2172, 2202
Bsc4I CCNNNNNNNGG 4 cut(s) 113, 1103, 1443, 2272
Bse118I RCCGGY 1 cut(s) 980
Bse1I ACTGG 3 cut(s) 252, 462, 1867
Bse21I CCTNAGG 1 cut(s) 2412
Bse3DI GCAATG 2 cut(s) 1247, 1605
BseBI CCWGG 8 cut(s) 368, 380, 516, 716, 1098, 1449, 1587, 1645
BseDI CCNNGG 5 cut(s) 294, 367, 714, 1899, 1933
BseGI GGATG 3 cut(s) 715, 1372, 1796
BseLI CCNNNNNNNGG 4 cut(s) 113, 1103, 1443, 2272
BseMI GCAATG 2 cut(s) 1247, 1605
BseMII CTCAG 3 cut(s) 1326, 2284, 2426
BseNI ACTGG 3 cut(s) 252, 462, 1867
BseRI GAGGAG 3 cut(s) 362, 710, 859
BseSI GKGCMC 1 cut(s) 1660
BseXI GCAGC 9 cut(s) 619, 1586, 1627, 1684, 1862, 1918, 1958, 2127, 2138
Bsh1236I CGCG 1 cut(s) 2151
Bsh1285I CGRYCG 1 cut(s) 77
BshFI GGCC 2 cut(s) 888, 1447
BshNI GGYRCC 1 cut(s) 626
BsiEI CGRYCG 1 cut(s) 77
BsiHKAI GWGCWC 4 cut(s) 359, 1081, 1249, 1660
BsiHKCI CYCGRG 1 cut(s) 1839
BsiSI CCGG 3 cut(s) 107, 889, 981
BslFI GGGAC 2 cut(s) 398, 2348
BslI CCNNNNNNNGG 4 cut(s) 113, 1103, 1443, 2272
BsmAI GTCTC 3 cut(s) 235, 769, 2281
BsmFI GGGAC 2 cut(s) 398, 2348
BsmI GAATGC 1 cut(s) 855
BsnI GGCC 2 cut(s) 888, 1447
Bso31I GGTCTC 1 cut(s) 2281
BsoBI CYCGRG 1 cut(s) 1839
Bsp1286I GDGCHC 5 cut(s) 359, 1081, 1249, 1660, 1987
BspACI CCGC 4 cut(s) 80, 83, 630, 1750
BspANI GGCC 2 cut(s) 888, 1447
BspCNI CTCAG 3 cut(s) 1325, 2283, 2425
BspFNI CGCG 1 cut(s) 2151
BspHI TCATGA 1 cut(s) 739
BspMAI CTGCAG 1 cut(s) 2128
BspPI GGATC 2 cut(s) 30, 1177
BspQI GCTCTTC 1 cut(s) 2401
BspT107I GGYRCC 1 cut(s) 626
BspTNI GGTCTC 1 cut(s) 2281
BsrDI GCAATG 2 cut(s) 1247, 1605
BsrFI RCCGGY 1 cut(s) 980
BsrI ACTGG 3 cut(s) 252, 462, 1867
BssAI RCCGGY 1 cut(s) 980
BssECI CCNNGG 5 cut(s) 294, 367, 714, 1899, 1933
BssSI CACGAG 1 cut(s) 636
BssT1I CCWWGG 3 cut(s) 294, 1899, 1933
Bst2BI CACGAG 1 cut(s) 636
Bst2UI CCWGG 8 cut(s) 368, 380, 516, 716, 1098, 1449, 1587, 1645
Bst4CI ACNGT 4 cut(s) 246, 1756, 2141, 2356
Bst6I CTCTTC 2 cut(s) 448, 2401
BstAPI GCANNNNNTGC 1 cut(s) 1607
BstBAI YACGTR 1 cut(s) 572
BstC8I GCNNGC 5 cut(s) 1401, 1572, 1739, 1779, 1806
BstDEI CTNAG 8 cut(s) 264, 1038, 1312, 1442, 1798, 2270, 2412, 2427
BstENI CCTNNNNNAGG 1 cut(s) 1441
BstF5I GGATG 3 cut(s) 715, 1372, 1796
BstFNI CGCG 1 cut(s) 2151
BstHHI GCGC 2 cut(s) 187, 2176
BstMAI GTCTC 3 cut(s) 235, 769, 2281
BstMCI CGRYCG 1 cut(s) 77
BstMWI GCNNNNNNNGC 6 cut(s) 182, 719, 1607, 1637, 2030, 2222
BstNI CCWGG 8 cut(s) 368, 380, 516, 716, 1098, 1449, 1587, 1645
BstNSI RCATGY 2 cut(s) 1781, 1808
BstSCI CCNGG 9 cut(s) 106, 366, 378, 514, 714, 1096, 1447, 1585, 1643
BstSFI CTRYAG 4 cut(s) 1689, 1782, 2110, 2124
BstSLI GKGCMC 1 cut(s) 1660
BstSNI TACGTA 1 cut(s) 572
BstUI CGCG 1 cut(s) 2151
BstV1I GCAGC 9 cut(s) 619, 1586, 1627, 1684, 1862, 1918, 1958, 2127, 2138
BstV2I GAAGAC 2 cut(s) 2054, 2394
BstX2I RGATCY 1 cut(s) 960
BstYI RGATCY 1 cut(s) 960
Bsu36I CCTNAGG 1 cut(s) 2412
BsuRI GGCC 2 cut(s) 888, 1447
BtgZI GCGATG 1 cut(s) 1002
BtsCI GGATG 3 cut(s) 715, 1372, 1796
BtsIMutI CAGTG 3 cut(s) 259, 469, 1752
Cac8I GCNNGC 5 cut(s) 1401, 1572, 1739, 1779, 1806
CaiI CAGNNNCTG 1 cut(s) 1960
CciI TCATGA 1 cut(s) 739
CfoI GCGC 2 cut(s) 187, 2176
Cfr10I RCCGGY 1 cut(s) 980
Cfr13I GGNCC 5 cut(s) 159, 1091, 1202, 1317, 2362
CsiI ACCWGGT 1 cut(s) 514
Csp6I GTAC 7 cut(s) 569, 573, 627, 661, 1148, 1845, 2147
CviQI GTAC 7 cut(s) 569, 573, 627, 661, 1148, 1845, 2147
DdeI CTNAG 8 cut(s) 264, 1038, 1312, 1442, 1798, 2270, 2412, 2427
DraI TTTAAA 2 cut(s) 496, 970
EaeI YGGCCR 1 cut(s) 886
Eam1104I CTCTTC 2 cut(s) 448, 2401
EarI CTCTTC 2 cut(s) 448, 2401
Eco105I TACGTA 1 cut(s) 572
Eco130I CCWWGG 3 cut(s) 294, 1899, 1933
Eco147I AGGCCT 1 cut(s) 1447
Eco24I GRGCYC 1 cut(s) 1987
Eco31I GGTCTC 1 cut(s) 2281
Eco47I GGWCC 5 cut(s) 159, 1091, 1202, 1317, 2362
Eco57I CTGAAG 1 cut(s) 108
Eco81I CCTNAGG 1 cut(s) 2412
Eco88I CYCGRG 1 cut(s) 1839
EcoNI CCTNNNNNAGG 1 cut(s) 1441
EcoO109I RGGNCCY 3 cut(s) 159, 1091, 2362
EcoRII CCWGG 8 cut(s) 366, 378, 514, 714, 1096, 1447, 1585, 1643
EcoT14I CCWWGG 3 cut(s) 294, 1899, 1933
EcoT38I GRGCYC 1 cut(s) 1987
ErhI CCWWGG 3 cut(s) 294, 1899, 1933
FalI AAGNNNNNCTT 6 cut(s) 650, 682, 950, 982, 2250, 2282
FaqI GGGAC 2 cut(s) 398, 2348
FauNDI CATATG 1 cut(s) 760
FbaI TGATCA 3 cut(s) 325, 1501, 1540
FokI GGATG 3 cut(s) 722, 1379, 1803
FriOI GRGCYC 1 cut(s) 1987
FspAI RTGCGCAY 1 cut(s) 2175
FspBI CTAG 6 cut(s) 221, 863, 1118, 1251, 2192, 2405
FspI TGCGCA 1 cut(s) 2175
GlaI GCGC 2 cut(s) 186, 2175
GsuI CTGGAG 6 cut(s) 31, 445, 1080, 1407, 1569, 1617
HaeIII GGCC 2 cut(s) 888, 1447
HapII CCGG 3 cut(s) 107, 889, 981
HhaI GCGC 2 cut(s) 187, 2176
Hin6I GCGC 2 cut(s) 185, 2174
HinP1I GCGC 2 cut(s) 185, 2174
HindIII AAGCTT 1 cut(s) 1739
HinfI GANTC 7 cut(s) 338, 350, 734, 1139, 1582, 1682, 1769
HpaII CCGG 3 cut(s) 107, 889, 981
HphI GGTGA 5 cut(s) 570, 2017, 2153, 2246, 2391
Hpy166II GTNNAC 4 cut(s) 467, 860, 1148, 1658
Hpy188I TCNGA 9 cut(s) 205, 330, 337, 769, 1174, 1467, 1506, 1515, 1581
Hpy8I GTNNAC 4 cut(s) 467, 860, 1148, 1658
Hpy99I CGWCG 1 cut(s) 1981
HpyAV CCTTC 8 cut(s) 83, 605, 827, 1124, 1215, 1619, 1898, 2276
HpyCH4III ACNGT 4 cut(s) 246, 1756, 2141, 2356
HpyCH4IV ACGT 2 cut(s) 571, 2018
HpyF10VI GCNNNNNNNGC 6 cut(s) 182, 719, 1607, 1637, 2030, 2222
HpyF3I CTNAG 8 cut(s) 264, 1038, 1312, 1442, 1798, 2270, 2412, 2427
HpySE526I ACGT 2 cut(s) 571, 2018
HspAI GCGC 2 cut(s) 185, 2174
KpnI GGTACC 1 cut(s) 630
Ksp22I TGATCA 3 cut(s) 325, 1501, 1540
LguI GCTCTTC 1 cut(s) 2401
Lsp1109I GCAGC 9 cut(s) 619, 1586, 1627, 1684, 1862, 1918, 1958, 2127, 2138
LweI GCATC 3 cut(s) 700, 1267, 1659
MabI ACCWGGT 1 cut(s) 514
MaeI CTAG 6 cut(s) 221, 863, 1118, 1251, 2192, 2405
MaeII ACGT 2 cut(s) 571, 2018
MaeIII GTNAC 6 cut(s) 212, 754, 928, 1825, 2005, 2048
MboII GAAGA 9 cut(s) 435, 658, 1732, 2054, 2207, 2243, 2354, 2388, 2399
MfeI CAATTG 2 cut(s) 1281, 1349
MflI RGATCY 1 cut(s) 960
MhlI GDGCHC 5 cut(s) 359, 1081, 1249, 1660, 1987
MlyI GAGTC 5 cut(s) 347, 359, 1576, 1691, 1778
MmeI TCCRAC 2 cut(s) 684, 1180
MroXI GAANNNNTTC 4 cut(s) 1887, 1956, 1972, 2250
MseI TTAA 8 cut(s) 392, 495, 621, 812, 969, 1491, 1634, 2328
MslI CAYNNNNRTG 3 cut(s) 744, 1184, 2259
MspA1I CMGCKG 2 cut(s) 632, 1949
MspI CCGG 3 cut(s) 107, 889, 981
MspR9I CCNGG 9 cut(s) 108, 368, 380, 516, 716, 1098, 1449, 1587, 1645
MunI CAATTG 2 cut(s) 1281, 1349
Mva1269I GAATGC 1 cut(s) 855
MvaI CCWGG 8 cut(s) 368, 380, 516, 716, 1098, 1449, 1587, 1645
MvnI CGCG 1 cut(s) 2151
MwoI GCNNNNNNNGC 6 cut(s) 182, 719, 1607, 1637, 2030, 2222
NciI CCSGG 1 cut(s) 108
NdeI CATATG 1 cut(s) 760
NmuCI GTSAC 3 cut(s) 1825, 2005, 2048
NsbI TGCGCA 1 cut(s) 2175
NspI RCATGY 2 cut(s) 1781, 1808
PaeI GCATGC 2 cut(s) 1781, 1808
PaeR7I CTCGAG 1 cut(s) 1839
PagI TCATGA 1 cut(s) 739
PceI AGGCCT 1 cut(s) 1447
PciSI GCTCTTC 1 cut(s) 2401
PcsI WCGNNNNNNNCGW 2 cut(s) 70, 1459
PctI GAATGC 1 cut(s) 855
PdmI GAANNNNTTC 4 cut(s) 1887, 1956, 1972, 2250
PfeI GAWTC 2 cut(s) 734, 1139
PfoI TCCNGGA 2 cut(s) 378, 1585
Ple19I CGATCG 1 cut(s) 77
PleI GAGTC 5 cut(s) 346, 358, 1576, 1690, 1777
PpsI GAGTC 5 cut(s) 346, 358, 1576, 1690, 1777
Ppu21I YACGTR 1 cut(s) 572
PpuMI RGGWCCY 3 cut(s) 159, 1091, 2362
PshBI ATTAAT 2 cut(s) 621, 812
Psp5II RGGWCCY 3 cut(s) 159, 1091, 2362
Psp6I CCWGG 8 cut(s) 366, 378, 514, 714, 1096, 1447, 1585, 1643
PspGI CCWGG 8 cut(s) 366, 378, 514, 714, 1096, 1447, 1585, 1643
PspPI GGNCC 5 cut(s) 159, 1091, 1202, 1317, 2362
PspPPI RGGWCCY 3 cut(s) 159, 1091, 2362
PspXI VCTCGAGB 1 cut(s) 1839
PstI CTGCAG 1 cut(s) 2128
PstNI CAGNNNCTG 1 cut(s) 1960
PsuI RGATCY 1 cut(s) 960
PvuI CGATCG 1 cut(s) 77
PvuII CAGCTG 1 cut(s) 1949
RsaI GTAC 7 cut(s) 570, 574, 628, 662, 1149, 1846, 2148
RsaNI GTAC 7 cut(s) 569, 573, 627, 661, 1148, 1845, 2147
RseI CAYNNNNRTG 3 cut(s) 744, 1184, 2259
SapI GCTCTTC 1 cut(s) 2401
SaqAI TTAA 8 cut(s) 392, 495, 621, 812, 969, 1491, 1634, 2328
Sau96I GGNCC 5 cut(s) 159, 1091, 1202, 1317, 2362
ScaI AGTACT 1 cut(s) 662
SchI GAGTC 5 cut(s) 347, 359, 1576, 1691, 1778
ScrFI CCNGG 9 cut(s) 108, 368, 380, 516, 716, 1098, 1449, 1587, 1645
SduI GDGCHC 5 cut(s) 359, 1081, 1249, 1660, 1987
SexAI ACCWGGT 1 cut(s) 514
SfaNI GCATC 3 cut(s) 700, 1267, 1659
SfcI CTRYAG 4 cut(s) 1689, 1782, 2110, 2124
Sfr274I CTCGAG 1 cut(s) 1839
SinI GGWCC 5 cut(s) 159, 1091, 1202, 1317, 2362
SlaI CTCGAG 1 cut(s) 1839
SmiMI CAYNNNNRTG 3 cut(s) 744, 1184, 2259
SmlI CTYRAG 1 cut(s) 1839
SmoI CTYRAG 1 cut(s) 1839
SnaBI TACGTA 1 cut(s) 572
SphI GCATGC 2 cut(s) 1781, 1808
SseBI AGGCCT 1 cut(s) 1447
SsiI CCGC 4 cut(s) 80, 83, 630, 1750
SspI AATATT 2 cut(s) 673, 906
SspMI CTAG 6 cut(s) 221, 863, 1118, 1251, 2192, 2405
StuI AGGCCT 1 cut(s) 1447
StyD4I CCNGG 9 cut(s) 106, 366, 378, 514, 714, 1096, 1447, 1585, 1643
StyI CCWWGG 3 cut(s) 294, 1899, 1933
TaaI ACNGT 4 cut(s) 246, 1756, 2141, 2356
TaiI ACGT 2 cut(s) 574, 2021
TatI WGTACW 1 cut(s) 660
TauI GCSGC 3 cut(s) 83, 86, 1752
TfiI GAWTC 2 cut(s) 734, 1139
Tru1I TTAA 8 cut(s) 392, 495, 621, 812, 969, 1491, 1634, 2328
Tru9I TTAA 8 cut(s) 392, 495, 621, 812, 969, 1491, 1634, 2328
TscAI CASTG 3 cut(s) 259, 469, 1759
TseFI GTSAC 3 cut(s) 1825, 2005, 2048
TseI GCWGC 9 cut(s) 632, 1574, 1640, 1672, 1850, 1906, 1946, 2115, 2126
Tsp45I GTSAC 3 cut(s) 1825, 2005, 2048
TspDTI ATGAA 7 cut(s) 435, 615, 1005, 1168, 1638, 1665, 1896
TspRI CASTG 3 cut(s) 259, 469, 1759
VneI GTGCAC 1 cut(s) 1656
VpaK11BI GGWCC 5 cut(s) 159, 1091, 1202, 1317, 2362
VspI ATTAAT 2 cut(s) 621, 812
XagI CCTNNNNNAGG 1 cut(s) 1441
XapI RAATTY 8 cut(s) 52, 233, 274, 406, 688, 1013, 1065, 1971
XbaI TCTAGA 1 cut(s) 2404
XceI RCATGY 2 cut(s) 1781, 1808
XhoI CTCGAG 1 cut(s) 1839
XmnI GAANNNNTTC 4 cut(s) 1887, 1956, 1972, 2250
XspI CTAG 6 cut(s) 221, 863, 1118, 1251, 2192, 2405
ZrmI AGTACT 1 cut(s) 662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.