Rh7AG265300

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
27368487 .. 27373221
4735 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG265300.1

Sequence Viewer

Length: 2853 bp
ATGCCGATTCTCGAAATACTGTCTGTAGTATTGGGGACTGGCATCACGTCGGCATTTCTGCCTGACGTTGCTAAGAAACTTGTTCAAGTCGGTCGAAAGTTGAGAGCACGAGATCCAGAGATCAATCAAAAGCTCCAAGAGTTGGAAAGAAGATTGTTGAAAATTCAATCCCATGTCGACGATGCCGAAAACAAGGCTTCTATCTCCAATGCCTACCAGATCATAATCGAAGATTTCAAGAATGTTCTTCTGGATGCAGATGATTTGCTGGACAAGACTCTTTTGGAGTATGAGAGGCTGTATTCTCAGAAAGTGAGGCCCGCCAAATTGGAAAAGGATTTGAAATCTTTTGAGGGAAAGCTCGGCAAAGAGATCGGTGAGATGGTGGCTAGGGTGAATGGTTTAGCAAGCGAAATGGAGGGTTACACTATCTCAGAACTAAGCCAACCGAGGCCTGCTCGAACTTTTGCTCCTCCTCCTCAGATTATCAGAGGATCGTTGGTTGATGAGCTCTCTGTAATTGGAAGGGAAAAGGATAAGCAGCAAATCCTGCAGTTGGTGTCTAAGCAGAGCAAGACAGCTGTTTCTGTGATTTCAATAGTGGGCATGGTTGGGATCGGGAAGACTACACTTGCCCAGCTAGTCTTCAATCATCAACATGTCAATGACAAATTTAAGGCCGAAAGAAGGTGGTGGGTGAGTGTTTCTTTCGATGATGATGTGCAGAAGATCACCAAATCCATCCTTGAGTCCACTACGAAGACAGTTCCGGATTCCAGTATTGCGCAGTTGTCAAGTGTGGACTCTGTTCAGCTCAAATTAAAGGAGATTGTGGGGGACAAGGAGAGGTTTTTGCTCGTGCTAGATGGCATGTGTGATGAGAATCCTATCAATTGGGATGCCTTGATATTGCCATTTAGATCTGCAGCACCCGGGAGCATAATTGTGGTAACTACTCGAAGCCAAGTTGTTTCATCCATCGTTGCTGATCATGGCAGTACATATTGCTTGGGTGTTTTGTCAGATAAACATTGTTTGGAAATTATCAATAGAGGCTTGAGATCAAGGCTCAGTGAGAAGAGTGGCCTACAGATAGCAAAAAAGTGTAAAGGCCTTCCATTGGTGGCCAAATTGATTGGAAGTGTGACGCGTCTCAAATCAAAAGAGATGGAGTGGGATGAGATTCTAAAATGTGAGCTTTGGAACTTGTCAGAAGATAAGAATCTGATCTATCCAGTGCTTAAACTTGGGTATGACCATTTGCCAGCTTATTTGAAAAGATGTTTTGCTTATTCTTCTCTTCTCCCTCGTAATCTTCCCTTCCAAAGGGATGATTTGATCCAACTGTGGGCAGCTGAAGGCTTTATTGAAGCTCGAGGAACAAGAAGAATTGAAGATATTGGAAGAGAGTACTTTGATGACTTGTGCTCAAGGTCCTTTTTTCAAGTTCCATCAAAGAATCCTGGCGAAGGAAAGTATGAAATGCATGGCTTCATTCATGACTTGGCGAAAATAGTCTCAACCAACTTATGCTTTGCGTCTGAGGATACCAAGCCACACGTCTTGCCCATGTCTACAAATGTCCGGCATTCCTCAATTTGTGATGAAAAAGTTGAATCAGGTATGTTGGAAGAGTTTTACAAGTATAAGAAGTTAAGGACTTTTATGTTGCTCTCCAAGGACCCATACATGCTTCAAAGTGTTCCTGATGATTTCTTTCGGAAGTTTCCATGCTTAAGAGTGTTAAATTTGAGTGGTACTCGCATCTCTAAATTATCCGGAGATATTAAAATGTTGATACACCTTCGTCACCTCAATGTTAGCGGTACCTTGATCATAAAATTCCCACCGGGTATAGAGCAATTAAATTGGTTAGAAAGACTCAATGTCAAAAATTGTTCCAAACTTGAGGAGCTACCTGAGAACTTAAACAAGTTGGTTAAGCTACGACATATTGACCTTGACAAACTCGGTAAAGTCACTTCCATGCCTGTTGATGTTGGGAAGTTAACTAGTCTTGAAACCCTGACTGTTTTTGTGGTGGGAAGTGAAGAAGGAAAAAAAATTGAGGAGCTCAAGGACATGAGGTGCCTCCGTGGATCCATTTGCATTCAAAAGCTTGAGAAAGTGGAAGATGACAGAGAAGCTAAGGCTGCTAAGTTACAAGAGAAGCAATACTTGGAGGAATTGGAGTTGCAATGGGAACCAAGGAGATCTGGAACAGTTGACCAAGCAGTTCTTGAGGGTCTTGAACCTCATCAGGGCTTGTTAAAGTTACAAGTAAAAGGTTACTGCGGTTCAAAATTTCCAGATTGGATGAGTAACCCATCATTTTGCAAGCTTGTGACCATGAATCTAAGAAAATGTGGATCTTGTACACTCCTTCCTTCACTTGGTGGACTTCCTCTTCTCAAACATCTTGTCATTGAAGAAATGAAAAGTTTGAGAACCGTGGATGATCGGTTTTTTCAATCAGATGGTCGGGTATTGCAAAGAGAGGGTTTTCCATCTTTGGTAACACTAAAATTTGGGGAAATGCCTGCATTGAATACTTGGAAAGGAATGGAAGCATCTGACATGCCTCGCCTTAGAAAGCTTACCATTATAGCTTGTAACGAATTTCGCAACCTACCTCCATTGTACAACCTAGCTGCTCTTAAGGAGTTAGAAATCAATGGTTGCCCTGAGCTTCGATCATTTCCAGGGGAAAAACTACCAAAATCACTCAAAAGGTTGATCATTTCAGAAAGTGACAAATTAAAGCAGAAGTACTGTAGGGTGAATGTGGGTGATTGGGACAAGATCAGCTGGGTTAGCCACATAGAGACTGAGGACGGAAGGATTCAACAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

950

Amino Acids

107.69

Weight (kDa)

8.62

Isoelectric Point (pI)

45.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 36 - 100 4.3e-07 Rx N-terminal domain
NB-ARC PF00931 177 - 350 6.4e-26 NB-ARC domain
WHD_DRP PF23559 436 - 503 5.9e-22 Disease resistance protein Winged helix domain
LRR_14 PF23598 573 - 888 4.4e-33 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 689 - 812 5.5e-38 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 786
Acc65I GGTACC 1 cut(s) 1826
AccB1I GGYRCC 2 cut(s) 1826, 2088
AccB7I CCANNNNNTGG 1 cut(s) 142
AccI GTMKAC 2 cut(s) 177, 1574
AccII CGCG 1 cut(s) 1150
AccIII TCCGGA 2 cut(s) 769, 1778
AciI CCGC 3 cut(s) 321, 1824, 2295
AclWI GGATC 7 cut(s) 107, 502, 623, 1333, 2094, 2107, 2377
AcoI YGGCCR 1 cut(s) 1125
AcsI RAATTY 7 cut(s) 162, 671, 1747, 1841, 2303, 2525, 2618
AcuI CTGAAG 1 cut(s) 1377
AdeI CACNNNGTG 1 cut(s) 2396
AfaI GTAC 7 cut(s) 1000, 1412, 1759, 1828, 2377, 2642, 2771
AfiI CCNNNNNNNGG 9 cut(s) 142, 556, 687, 1120, 1326, 1348, 1469, 2261, 2393
AflII CTTAAG 2 cut(s) 1735, 2657
AflIII ACRYGT 3 cut(s) 658, 1148, 1558
AhdI GACNNNNNGTC 1 cut(s) 1886
AhlI ACTAGT 1 cut(s) 2012
AjiI CACGTC 2 cut(s) 48, 1561
AjnI CCWGG 2 cut(s) 1462, 2701
AjuI GAANNNNNNNTTGG 2 cut(s) 2162, 2194
AloI GAACNNNNNNTCC 2 cut(s) 454, 486
Alw21I GWGCWC 4 cut(s) 109, 513, 1430, 2076
Alw26I GTCTC 3 cut(s) 1157, 1522, 2819
AlwI GGATC 7 cut(s) 107, 502, 623, 1333, 2094, 2107, 2377
Ama87I CYCGRG 2 cut(s) 932, 1374
Aor13HI TCCGGA 2 cut(s) 769, 1778
AoxI GGCC 6 cut(s) 317, 452, 678, 1084, 1111, 1125
ApeKI GCWGC 5 cut(s) 541, 926, 1352, 2153, 2651
ApoI RAATTY 7 cut(s) 162, 671, 1747, 1841, 2303, 2525, 2618
ArsI GACNNNNNNTTYG 2 cut(s) 2406, 2438
Asp718I GGTACC 1 cut(s) 1826
AspLEI GCGC 1 cut(s) 787
AspS9I GGNCC 3 cut(s) 318, 1434, 1681
AsuC2I CCSGG 3 cut(s) 933, 934, 1851
AsuHPI GGTGA 7 cut(s) 389, 406, 709, 724, 1802, 2791, 2801
AvaI CYCGRG 2 cut(s) 932, 1374
AvaII GGWCC 2 cut(s) 1434, 1681
BalI TGGCCA 1 cut(s) 1127
BamHI GGATCC 1 cut(s) 2099
BanI GGYRCC 2 cut(s) 1826, 2088
BanII GRGCYC 2 cut(s) 513, 2076
BarI GAAGNNNNNNTAC 2 cut(s) 1966, 1998
BauI CACGAG 2 cut(s) 108, 857
BbsI GAAGAC 3 cut(s) 629, 637, 767
Bbv12I GWGCWC 4 cut(s) 109, 513, 1430, 2076
BbvI GCAGC 5 cut(s) 553, 938, 1364, 2140, 2638
BccI CCATC 9 cut(s) 376, 749, 860, 986, 1162, 1459, 2335, 2471, 2515
BcgI CGANNNNNNTGC 2 cut(s) 355, 389
BciT130I CCWGG 2 cut(s) 1464, 2703
BciVI GTATCC 1 cut(s) 1540
BclI TGATCA 3 cut(s) 988, 1833, 2736
BcnI CCSGG 3 cut(s) 933, 934, 1851
BcoDI GTCTC 3 cut(s) 1157, 1522, 2819
BcuI ACTAGT 1 cut(s) 2012
BfaI CTAG 5 cut(s) 390, 641, 863, 2013, 2648
BfmI CTRYAG 5 cut(s) 24, 551, 924, 1088, 2773
BfrI CTTAAG 2 cut(s) 1735, 2657
BfuI GTATCC 1 cut(s) 1540
BglII AGATCT 2 cut(s) 920, 2213
BisI GCNGC 5 cut(s) 542, 927, 1353, 2154, 2652
BlsI GCNGC 5 cut(s) 543, 928, 1354, 2155, 2653
BmcAI AGTACT 2 cut(s) 1412, 2771
Bme1390I CCNGG 5 cut(s) 933, 934, 1464, 1851, 2703
Bme18I GGWCC 2 cut(s) 1434, 1681
BmeRI GACNNNNNGTC 1 cut(s) 1886
BmeT110I CYCGRG 2 cut(s) 932, 1374
BmgBI CACGTC 2 cut(s) 48, 1561
BmgT120I GGNCC 3 cut(s) 318, 1434, 1681
BmiI GGNNCC 5 cut(s) 1683, 1828, 2090, 2101, 2205
BmrFI CCNGG 5 cut(s) 933, 934, 1464, 1851, 2703
BmsI GCATC 6 cut(s) 51, 172, 244, 889, 1773, 2579
BpiI GAAGAC 3 cut(s) 629, 637, 767
BplI GAGNNNNNCTC 4 cut(s) 442, 474, 1744, 1776
Bpu10I CCTNAGC 2 cut(s) 2148, 2685
BpuEI CTTGAG 7 cut(s) 767, 1078, 1414, 1928, 2060, 2141, 2261
BpuMI CCSGG 3 cut(s) 933, 934, 1851
BsaBI GATNNNNATC 3 cut(s) 224, 882, 1221
BsaJI CCNNGG 7 cut(s) 449, 932, 1677, 2095, 2207, 2451, 2702
BsaWI WCCGGW 2 cut(s) 769, 1778
BsaXI ACNNNNNCTCC 2 cut(s) 454, 484
Bsc4I CCNNNNNNNGG 9 cut(s) 142, 556, 687, 1120, 1326, 1348, 1469, 2261, 2393
Bse1I ACTGG 3 cut(s) 43, 777, 1235
Bse3DI GCAATG 1 cut(s) 2204
Bse8I GATNNNNATC 3 cut(s) 224, 882, 1221
BseAI TCCGGA 2 cut(s) 769, 1778
BseBI CCWGG 2 cut(s) 1464, 2703
BseDI CCNNGG 7 cut(s) 449, 932, 1677, 2095, 2207, 2451, 2702
BseGI GGATG 8 cut(s) 259, 741, 904, 974, 1183, 1336, 2322, 2461
BseJI GATNNNNATC 3 cut(s) 224, 882, 1221
BseLI CCNNNNNNNGG 9 cut(s) 142, 556, 687, 1120, 1326, 1348, 1469, 2261, 2393
BseMI GCAATG 1 cut(s) 2204
BseMII CTCAG 8 cut(s) 320, 447, 494, 1084, 1533, 1911, 2676, 2820
BseNI ACTGG 3 cut(s) 43, 777, 1235
BseRI GAGGAG 5 cut(s) 462, 465, 468, 1925, 2084
BseXI GCAGC 5 cut(s) 553, 938, 1364, 2140, 2638
BseYI CCCAGC 2 cut(s) 636, 2808
BsgI GTGCAG 1 cut(s) 743
Bsh1236I CGCG 1 cut(s) 1150
Bsh1285I CGRYCG 1 cut(s) 94
BshFI GGCC 6 cut(s) 319, 454, 680, 1086, 1113, 1127
BshNI GGYRCC 2 cut(s) 1826, 2088
BsiEI CGRYCG 1 cut(s) 94
BsiHKAI GWGCWC 4 cut(s) 109, 513, 1430, 2076
BsiHKCI CYCGRG 2 cut(s) 932, 1374
BsiSI CCGG 5 cut(s) 770, 933, 1585, 1779, 1850
BslFI GGGAC 3 cut(s) 49, 851, 2810
BslI CCNNNNNNNGG 9 cut(s) 142, 556, 687, 1120, 1326, 1348, 1469, 2261, 2393
BsmAI GTCTC 3 cut(s) 1157, 1522, 2819
BsmBI CGTCTC 1 cut(s) 1157
BsmFI GGGAC 3 cut(s) 49, 851, 2810
BsmI GAATGC 2 cut(s) 1588, 2109
BsnI GGCC 6 cut(s) 319, 454, 680, 1086, 1113, 1127
BsoBI CYCGRG 2 cut(s) 932, 1374
Bsp1286I GDGCHC 4 cut(s) 109, 513, 1430, 2076
Bsp13I TCCGGA 2 cut(s) 769, 1778
Bsp1407I TGTACA 2 cut(s) 2375, 2640
BspACI CCGC 3 cut(s) 321, 1824, 2295
BspANI GGCC 6 cut(s) 319, 454, 680, 1086, 1113, 1127
BspCNI CTCAG 8 cut(s) 319, 446, 493, 1083, 1534, 1912, 2677, 2821
BspEI TCCGGA 2 cut(s) 769, 1778
BspFNI CGCG 1 cut(s) 1150
BspHI TCATGA 1 cut(s) 1498
BspLI GGNNCC 5 cut(s) 1683, 1828, 2090, 2101, 2205
BspMAI CTGCAG 2 cut(s) 555, 928
BspPI GGATC 7 cut(s) 107, 502, 623, 1333, 2094, 2107, 2377
BspT107I GGYRCC 2 cut(s) 1826, 2088
BspTI CTTAAG 2 cut(s) 1735, 2657
BsrDI GCAATG 1 cut(s) 2204
BsrGI TGTACA 2 cut(s) 2375, 2640
BsrI ACTGG 3 cut(s) 43, 777, 1235
BssECI CCNNGG 7 cut(s) 449, 932, 1677, 2095, 2207, 2451, 2702
BssSI CACGAG 2 cut(s) 108, 857
BssT1I CCWWGG 2 cut(s) 1677, 2207
Bst2BI CACGAG 2 cut(s) 108, 857
Bst2UI CCWGG 2 cut(s) 1464, 2703
Bst4CI ACNGT 8 cut(s) 21, 766, 1347, 2032, 2224, 2452, 2774, 2850
Bst6I CTCTTC 5 cut(s) 1073, 1305, 1399, 1626, 2412
BstAFI CTTAAG 2 cut(s) 1735, 2657
BstAPI GCANNNNNTGC 1 cut(s) 550
BstAUI TGTACA 2 cut(s) 2375, 2640
BstC8I GCNNGC 6 cut(s) 321, 409, 456, 1266, 2339, 2541
BstDSI CCRYGG 2 cut(s) 2095, 2451
BstENI CCTNNNNNAGG 2 cut(s) 1324, 1467
BstF5I GGATG 8 cut(s) 259, 741, 904, 974, 1183, 1336, 2322, 2461
BstFNI CGCG 1 cut(s) 1150
BstHHI GCGC 1 cut(s) 787
BstMAI GTCTC 3 cut(s) 1157, 1522, 2819
BstMCI CGRYCG 1 cut(s) 94
BstMWI GCNNNNNNNGC 3 cut(s) 550, 2153, 2814
BstNI CCWGG 2 cut(s) 1464, 2703
BstNSI RCATGY 4 cut(s) 662, 874, 1693, 2581
BstSCI CCNGG 5 cut(s) 931, 932, 1462, 1849, 2701
BstSFI CTRYAG 5 cut(s) 24, 551, 924, 1088, 2773
BstUI CGCG 1 cut(s) 1150
BstV1I GCAGC 5 cut(s) 553, 938, 1364, 2140, 2638
BstV2I GAAGAC 3 cut(s) 629, 637, 767
BstX2I RGATCY 5 cut(s) 112, 920, 2099, 2213, 2369
BstYI RGATCY 5 cut(s) 112, 920, 2099, 2213, 2369
BsuI GTATCC 1 cut(s) 1540
BsuRI GGCC 6 cut(s) 319, 454, 680, 1086, 1113, 1127
BtgI CCRYGG 2 cut(s) 2095, 2451
BtrI CACGTC 2 cut(s) 48, 1561
BtsCI GGATG 8 cut(s) 259, 741, 904, 974, 1183, 1336, 2322, 2461
BtsIMutI CAGTG 2 cut(s) 1078, 1242
Cac8I GCNNGC 6 cut(s) 321, 409, 456, 1266, 2339, 2541
CciI TCATGA 1 cut(s) 1498
CfoI GCGC 1 cut(s) 787
Cfr13I GGNCC 3 cut(s) 318, 1434, 1681
Cfr9I CCCGGG 1 cut(s) 932
CseI GACGC 3 cut(s) 1139, 1156, 1527
Csp6I GTAC 7 cut(s) 999, 1411, 1758, 1827, 2376, 2641, 2770
CspCI CAANNNNNGTGG 2 cut(s) 1545, 1580
CviQI GTAC 7 cut(s) 999, 1411, 1758, 1827, 2376, 2641, 2770
DraIII CACNNNGTG 1 cut(s) 2396
DriI GACNNNNNGTC 1 cut(s) 1886
EaeI YGGCCR 1 cut(s) 1125
Eam1104I CTCTTC 5 cut(s) 1073, 1305, 1399, 1626, 2412
Eam1105I GACNNNNNGTC 1 cut(s) 1886
EarI CTCTTC 5 cut(s) 1073, 1305, 1399, 1626, 2412
Ecl136II GAGCTC 2 cut(s) 511, 2074
Eco130I CCWWGG 2 cut(s) 1677, 2207
Eco147I AGGCCT 2 cut(s) 454, 1113
Eco24I GRGCYC 2 cut(s) 513, 2076
Eco47I GGWCC 2 cut(s) 1434, 1681
Eco53kI GAGCTC 2 cut(s) 511, 2074
Eco57I CTGAAG 1 cut(s) 1377
Eco88I CYCGRG 2 cut(s) 932, 1374
EcoICRI GAGCTC 2 cut(s) 511, 2074
EcoNI CCTNNNNNAGG 2 cut(s) 1324, 1467
EcoO109I RGGNCCY 2 cut(s) 1434, 1681
EcoRII CCWGG 2 cut(s) 1462, 2701
EcoT14I CCWWGG 2 cut(s) 1677, 2207
EcoT22I ATGCAT 1 cut(s) 1488
EcoT38I GRGCYC 2 cut(s) 513, 2076
ErhI CCWWGG 2 cut(s) 1677, 2207
Esp3I CGTCTC 1 cut(s) 1157
FalI AAGNNNNNCTT 4 cut(s) 2162, 2194, 2223, 2255
FaqI GGGAC 3 cut(s) 49, 851, 2810
FauI CCCGC 1 cut(s) 328
FbaI TGATCA 3 cut(s) 988, 1833, 2736
FblI GTMKAC 2 cut(s) 177, 1574
Fnu4HI GCNGC 5 cut(s) 542, 927, 1353, 2154, 2652
FokI GGATG 8 cut(s) 266, 728, 911, 961, 1190, 1343, 2329, 2468
FriOI GRGCYC 2 cut(s) 513, 2076
Fsp4HI GCNGC 5 cut(s) 542, 927, 1353, 2154, 2652
FspBI CTAG 5 cut(s) 390, 641, 863, 2013, 2648
FspI TGCGCA 1 cut(s) 786
GlaI GCGC 1 cut(s) 786
GluI GCNGC 5 cut(s) 542, 927, 1353, 2154, 2652
GsaI CCCAGC 2 cut(s) 640, 2812
HaeIII GGCC 6 cut(s) 319, 454, 680, 1086, 1113, 1127
HapII CCGG 5 cut(s) 770, 933, 1585, 1779, 1850
HgaI GACGC 3 cut(s) 1139, 1156, 1527
HhaI GCGC 1 cut(s) 787
Hin6I GCGC 1 cut(s) 785
HinP1I GCGC 1 cut(s) 785
HincII GTYRAC 3 cut(s) 178, 2010, 2227
HindII GTYRAC 3 cut(s) 178, 2010, 2227
HindIII AAGCTT 3 cut(s) 2117, 2339, 2594
HpaI GTTAAC 1 cut(s) 2010
HpaII CCGG 5 cut(s) 770, 933, 1585, 1779, 1850
HphI GGTGA 7 cut(s) 389, 406, 709, 724, 1802, 2791, 2801
Hpy166II GTNNAC 8 cut(s) 178, 753, 802, 1575, 2010, 2227, 2378, 2399
Hpy8I GTNNAC 8 cut(s) 178, 753, 802, 1575, 2010, 2227, 2378, 2399
Hpy99I CGWCG 2 cut(s) 52, 182
HpyCH4III ACNGT 8 cut(s) 21, 766, 1347, 2032, 2224, 2452, 2774, 2850
HpyCH4IV ACGT 3 cut(s) 47, 66, 1560
HpyF10VI GCNNNNNNNGC 3 cut(s) 550, 2153, 2814
HpySE526I ACGT 3 cut(s) 47, 66, 1560
HspAI GCGC 1 cut(s) 785
Kpn2I TCCGGA 2 cut(s) 769, 1778
KpnI GGTACC 1 cut(s) 1830
Ksp22I TGATCA 3 cut(s) 988, 1833, 2736
KspAI GTTAAC 1 cut(s) 2010
LmnI GCTCC 5 cut(s) 138, 475, 936, 1912, 2071
Lsp1109I GCAGC 5 cut(s) 553, 938, 1364, 2140, 2638
LweI GCATC 6 cut(s) 51, 172, 244, 889, 1773, 2579
MaeI CTAG 5 cut(s) 390, 641, 863, 2013, 2648
MaeII ACGT 3 cut(s) 47, 66, 1560
MfeI CAATTG 1 cut(s) 892
MflI RGATCY 5 cut(s) 112, 920, 2099, 2213, 2369
MhlI GDGCHC 4 cut(s) 109, 513, 1430, 2076
MlsI TGGCCA 1 cut(s) 1127
MluI ACGCGT 1 cut(s) 1148
MluNI TGGCCA 1 cut(s) 1127
MlyI GAGTC 4 cut(s) 271, 758, 797, 1875
MmeI TCCRAC 3 cut(s) 123, 1366, 1608
Mox20I TGGCCA 1 cut(s) 1127
Mph1103I ATGCAT 1 cut(s) 1488
MroI TCCGGA 2 cut(s) 769, 1778
MscI TGGCCA 1 cut(s) 1127
MslI CAYNNNNRTG 5 cut(s) 657, 663, 944, 1815, 1985
Msp20I TGGCCA 1 cut(s) 1127
MspA1I CMGCKG 3 cut(s) 581, 1355, 2808
MspCI CTTAAG 2 cut(s) 1735, 2657
MspI CCGG 5 cut(s) 770, 933, 1585, 1779, 1850
MspR9I CCNGG 5 cut(s) 933, 934, 1464, 1851, 2703
MunI CAATTG 1 cut(s) 892
Mva1269I GAATGC 2 cut(s) 1588, 2109
MvaI CCWGG 2 cut(s) 1464, 2703
MvnI CGCG 1 cut(s) 1150
MwoI GCNNNNNNNGC 3 cut(s) 550, 2153, 2814
NciI CCSGG 3 cut(s) 933, 934, 1851
NlaIV GGNNCC 5 cut(s) 1683, 1828, 2090, 2101, 2205
NmeAIII GCCGAG 1 cut(s) 342
NmuCI GTSAC 5 cut(s) 1144, 1808, 1978, 2344, 2750
NsbI TGCGCA 1 cut(s) 786
NsiI ATGCAT 1 cut(s) 1488
NspI RCATGY 4 cut(s) 662, 874, 1693, 2581
PaeR7I CTCGAG 1 cut(s) 1374
PagI TCATGA 1 cut(s) 1498
PceI AGGCCT 2 cut(s) 454, 1113
PciI ACATGT 1 cut(s) 658
PcsI WCGNNNNNNNCGW 1 cut(s) 183
PctI GAATGC 2 cut(s) 1588, 2109
PfeI GAWTC 9 cut(s) 7, 773, 883, 1183, 1222, 1459, 1616, 2353, 2842
PflMI CCANNNNNTGG 1 cut(s) 142
PkrI GCNGC 5 cut(s) 543, 928, 1354, 2155, 2653
PleI GAGTC 4 cut(s) 271, 757, 797, 1875
PpsI GAGTC 4 cut(s) 271, 757, 797, 1875
PpuMI RGGWCCY 2 cut(s) 1434, 1681
PscI ACATGT 1 cut(s) 658
Psp124BI GAGCTC 2 cut(s) 513, 2076
Psp5II RGGWCCY 2 cut(s) 1434, 1681
Psp6I CCWGG 2 cut(s) 1462, 2701
PspFI CCCAGC 2 cut(s) 636, 2808
PspGI CCWGG 2 cut(s) 1462, 2701
PspN4I GGNNCC 5 cut(s) 1683, 1828, 2090, 2101, 2205
PspPI GGNCC 3 cut(s) 318, 1434, 1681
PspPPI RGGWCCY 2 cut(s) 1434, 1681
PspXI VCTCGAGB 1 cut(s) 1374
PstI CTGCAG 2 cut(s) 555, 928
PsuI RGATCY 5 cut(s) 112, 920, 2099, 2213, 2369
PvuII CAGCTG 3 cut(s) 581, 1355, 2808
RsaI GTAC 7 cut(s) 1000, 1412, 1759, 1828, 2377, 2642, 2771
RsaNI GTAC 7 cut(s) 999, 1411, 1758, 1827, 2376, 2641, 2770
RseI CAYNNNNRTG 5 cut(s) 657, 663, 944, 1815, 1985
SacI GAGCTC 2 cut(s) 513, 2076
SalI GTCGAC 1 cut(s) 176
SatI GCNGC 5 cut(s) 542, 927, 1353, 2154, 2652
Sau96I GGNCC 3 cut(s) 318, 1434, 1681
ScaI AGTACT 2 cut(s) 1412, 2771
SchI GAGTC 4 cut(s) 271, 758, 797, 1875
ScrFI CCNGG 5 cut(s) 933, 934, 1464, 1851, 2703
SduI GDGCHC 4 cut(s) 109, 513, 1430, 2076
SfaNI GCATC 6 cut(s) 51, 172, 244, 889, 1773, 2579
SfcI CTRYAG 5 cut(s) 24, 551, 924, 1088, 2773
Sfr274I CTCGAG 1 cut(s) 1374
SinI GGWCC 2 cut(s) 1434, 1681
SlaI CTCGAG 1 cut(s) 1374
SmaI CCCGGG 1 cut(s) 934
SmiMI CAYNNNNRTG 5 cut(s) 657, 663, 944, 1815, 1985
SpeI ACTAGT 1 cut(s) 2012
SseBI AGGCCT 2 cut(s) 454, 1113
SsiI CCGC 3 cut(s) 321, 1824, 2295
SspMI CTAG 5 cut(s) 390, 641, 863, 2013, 2648
SstI GAGCTC 2 cut(s) 513, 2076
StuI AGGCCT 2 cut(s) 454, 1113
StyD4I CCNGG 5 cut(s) 931, 932, 1462, 1849, 2701
StyI CCWWGG 2 cut(s) 1677, 2207
TaaI ACNGT 8 cut(s) 21, 766, 1347, 2032, 2224, 2452, 2774, 2850
TaiI ACGT 3 cut(s) 50, 69, 1563
TaqI TCGA 9 cut(s) 12, 94, 177, 228, 460, 711, 958, 1375, 2692
TaqII GACCGA 1 cut(s) 80
TatI WGTACW 5 cut(s) 998, 1410, 2375, 2640, 2769
TfiI GAWTC 9 cut(s) 7, 773, 883, 1183, 1222, 1459, 1616, 2353, 2842
TscAI CASTG 2 cut(s) 1078, 1242
TseFI GTSAC 5 cut(s) 1144, 1808, 1978, 2344, 2750
TseI GCWGC 5 cut(s) 541, 926, 1352, 2153, 2651
Tsp45I GTSAC 5 cut(s) 1144, 1808, 1978, 2344, 2750
TspDTI ATGAA 7 cut(s) 963, 1483, 1487, 1494, 1620, 2366, 2450
TspGWI ACGGA 2 cut(s) 2084, 2850
TspMI CCCGGG 1 cut(s) 932
TspRI CASTG 2 cut(s) 1078, 1242
Van91I CCANNNNNTGG 1 cut(s) 142
Vha464I CTTAAG 2 cut(s) 1735, 2657
VpaK11BI GGWCC 2 cut(s) 1434, 1681
XagI CCTNNNNNAGG 2 cut(s) 1324, 1467
XapI RAATTY 7 cut(s) 162, 671, 1747, 1841, 2303, 2525, 2618
XceI RCATGY 4 cut(s) 662, 874, 1693, 2581
XhoI CTCGAG 1 cut(s) 1374
XmaI CCCGGG 1 cut(s) 932
XmiI GTMKAC 2 cut(s) 177, 1574
XspI CTAG 5 cut(s) 390, 641, 863, 2013, 2648
ZrmI AGTACT 2 cut(s) 1412, 2771
Zsp2I ATGCAT 1 cut(s) 1488
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.