Rh4DG324400

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
Physical Location & Seq
Reverse (-)
54919643 .. 54923252
3610 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG324400.1

Sequence Viewer

Length: 2478 bp
ATGAAAAAAATGGTCTTGTCTGTGCAACAAGAGGGTGGAAATGTTTCTGTAATTCCAATAGTAGGGATGGCTGGGATTGGGAAAACAACACTTGCCCAACTCGTCTACAATGATGCAGATGTGCGTAACAAATTTGATTTGAAAATGTGGGTGTCTGTTTCTTTAGACTGTGGTCTGTGCATGATTACAAAATCTATTCTTGAGTCTGCTACTAGAGGAAAGGGTTCTCAGTTGTCAAGTTTGGATAATGTTCAGATTGAATTACAGAAGACATTGAAGGGGAAGAGGTTTTTACTTGTACTGGATGGCATTTGTAATGAGAATCTTAGTGATTGGGATCAATTCAGGTTGTCTTTTGGGGCTGCAAAGAAGGGGAGCAAGATTGTGATGACTACTCGAAGTGAAATTTCTGCCTCAGTTGTTGCCTCTACATCATATCGTTTGGATCCTCTGTGTGACAATGCTTGTTGGGAAATAATCAAGCAAAGAGGGAATCTTAATGGGCAGACTAATTTGGAGGCGAATGGCCTAGCAATTTCGAAGAAGTGCAAAGGGTTTCCATGGGTAGCAAAAGTGATTGGAAGCTGTTTGAATTCGGGAGAGATGGAGTGGGATGCTCTGTTAAGGTGTGAGCTTTGGGAACTGCAGGAACATAAAACACGAATCTATCCAGTCCTCAAATTGTTGAGCTATGATAATATGCCTTCTTATTTGAAAAGATGTTTCAGTTATTGTTCTATCTTTCCTCGTGATCATGTAGTTGAGAAGGATGATTTGGTCCAACTATGGGCAGCAGAAGGCTTTATTCAGTCCCAAGGAACAGGAAAAATTGAAGATGTTGGAAGACAGTATTTTGAGGACTTGTGTTCAAGGGCTTTCTTTTCGCAAGTTCCAAATATTGGTGGTGATCTGCAAAGATATAAAATGCATGAGCTCATTCATGATTTGGCAAGATTTGTTTCAACCAACTTATGCTTTTGTATGGATGACAATGTGCCATGCTTGGTGCACATATCTCCTAATGCTCGGCATGCGTCTTTGCTCTATGAAAATACTCAACTATCTACATTGGAGGCTTTCTACAAGTATAAGAAGTTGAGGACATTTACATTGCTTCCTAAGTCCCCATCTATTCCGAGGCCAGTCATGTTGCTTCCCAATTTTTCGTCCAATCTTGGCGAAGTCCCTCATGAATTTTTTGAAAGGTTGGGACGCTTGAGGGTGTTGAATTTGAGTCATAGTGCCATCTCTAAATTGCCTGAATCTATTGGAAATTTGATACATCTTCGTTACCTCAATCTTAGTCATACCCGTATTGAACTATTGCCAAAGCCTATAACAACAATATATGGGTTAGAAACATTGAAGCTCAAGAGTTGTCCTAAGCTTCTTCATTTGCCTGAGAACTTAAAGGACTTGATTAAGCTAAGACATCTTGACTTTGACAGACACCGTCAACTAAGTTCCATGCCAAAAGGTGTTGGGAAGTTAACTAGTCTCGAAACTCTTCATGCATTTAAAGTGGGAAAAGAGAAAGGATATCAGATTGAGGAGCTTAAGAACATGAGGTGTCTTCGTGGATCCATTTCTATTACAAATCTTGAGAATGTGGCAGATTCTATGCAGGCTGAGGCTGCTATGTTGCACAACAAGCAATACTTAGACAGGTTGGAGCTGGAATGGAATGCAATCAGAGGTCAAATGCAACCAGTTCAACAAGAAGTTCTTACAGGGCTGAAACCACATGCTGGGTTGAAGGAGTTACGAGTAGCTGGTTACTGTGGTTCTGTATTTCCCGGATGGATAGCCAACTCAGCATTTAGCAAGCTTGAGAGTATTGAATTAGAAAATTGCGCATTTTGTGAACTCCTTCCTTCTCTTGGCCAACTTCCGGGTCTCAAGAAACTTATTCAAAATATGGCTACTTTGAAAGGTGTGGATTATCTGTTTTGCGGTTCCTCAGCTGCTTTTCTATCCTTGGAGACGCTAACACTTCGTGACATGCCAGAGTTGAGTAACTGGTCAGGACTACGTGACAATGACATGCCTTTCCTCAGAGACCTCAGCATTGATTCTTGTCCAAAGTTGGCCACCCTACCTTCATTTCATTACCTAACTTCACTTCAATGTTTAGACATCAATCGTTGCCCTCAGCTTCAATCTTTGCCAGAGGGAGGACTGCCATCTTCACTCAAAACTTTGGTCATTATGGAGAGTGGCATCTTGAAGGATCGGTGCAAGGTGGGAGAAGGTGCAGATTGGAATAAGATCAGATGGATCCCTGCCATATTGATTGAAAATATAGTGATTCCAGCACAAAGACCGGATAACCAGATTGATGAGGTTCAGAGTGCTCCAGAAAACATGTTTTGCAGCCGAAACTCCTTGTTGACTTGTTCTGTTATTCTTTTTCCTCTGCTCTTCCTTTTTATGAGATCATTGTACCAGTACTTGTCCCAAGCCAGAGATCGATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

825

Amino Acids

92.97

Weight (kDa)

8.47

Isoelectric Point (pI)

43.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 11 - 164 1.9e-29 NB-ARC domain
WHD_DRP PF23559 247 - 317 1.4e-24 Disease resistance protein Winged helix domain
LRR_8 PF13855 389 - 439 7.8e-09 Leucine rich repeat
LRR_14 PF23598 405 - 668 1.2e-29 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 516 - 637 1.9e-36 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1855
AccB7I CCANNNNNTGG 2 cut(s) 899, 1748
AccI GTMKAC 1 cut(s) 105
AciI CCGC 1 cut(s) 1953
AclWI GGATC 8 cut(s) 345, 440, 453, 1575, 1588, 2238, 2272, 2285
AcoI YGGCCR 2 cut(s) 1882, 2088
AcsI RAATTY 6 cut(s) 131, 405, 592, 1193, 1228, 1273
AdeI CACNNNGTG 1 cut(s) 1997
AfaI GTAC 3 cut(s) 300, 2444, 2450
AfiI CCNNNNNNNGG 7 cut(s) 62, 787, 899, 1748, 1880, 1891, 2174
AflII CTTAAG 1 cut(s) 1556
AflIII ACRYGT 1 cut(s) 2364
AhlI ACTAGT 1 cut(s) 1493
AjuI GAANNNNNNNTTGG 2 cut(s) 758, 790
Alw21I GWGCWC 3 cut(s) 936, 1011, 2356
Alw26I GTCTC 4 cut(s) 1502, 1901, 1976, 2052
Alw44I GTGCAC 1 cut(s) 1007
AlwI GGATC 8 cut(s) 345, 440, 453, 1575, 1588, 2238, 2272, 2285
AoxI GGCC 4 cut(s) 526, 1139, 1882, 2088
ApaLI GTGCAC 1 cut(s) 1007
ApeKI GCWGC 5 cut(s) 362, 791, 1634, 1964, 2373
ApoI RAATTY 6 cut(s) 131, 405, 592, 1193, 1228, 1273
ArsI GACNNNNNNTTYG 2 cut(s) 2187, 2219
Asp700I GAANNNNTTC 4 cut(s) 43, 223, 1506, 1869
AspLEI GCGC 1 cut(s) 1856
AspS9I GGNCC 1 cut(s) 778
AsuC2I CCSGG 2 cut(s) 1797, 1893
AsuHPI GGTGA 1 cut(s) 917
AsuII TTCGAA 1 cut(s) 539
AvaII GGWCC 1 cut(s) 778
BaeGI GKGCMC 1 cut(s) 1011
BalI TGGCCA 2 cut(s) 1884, 2090
BamHI GGATCC 3 cut(s) 445, 1580, 2277
BanII GRGCYC 1 cut(s) 936
BauI CACGAG 1 cut(s) 747
BbsI GAAGAC 3 cut(s) 275, 850, 1565
Bbv12I GWGCWC 3 cut(s) 936, 1011, 2356
BbvCI CCTCAGC 4 cut(s) 1629, 1960, 2063, 2151
BbvI GCAGC 5 cut(s) 349, 803, 1621, 1951, 2385
BccI CCATC 8 cut(s) 61, 299, 598, 1135, 1253, 1794, 2191, 2268
BclI TGATCA 1 cut(s) 751
BcnI CCSGG 2 cut(s) 1797, 1893
BcoDI GTCTC 4 cut(s) 1502, 1901, 1976, 2052
BcuI ACTAGT 1 cut(s) 1493
BfaI CTAG 3 cut(s) 213, 530, 1494
BfmI CTRYAG 1 cut(s) 644
BfrI CTTAAG 1 cut(s) 1556
BisI GCNGC 5 cut(s) 363, 792, 1635, 1965, 2374
BlsI GCNGC 5 cut(s) 364, 793, 1636, 1966, 2375
BmcAI AGTACT 1 cut(s) 2450
Bme1390I CCNGG 2 cut(s) 1797, 1893
Bme18I GGWCC 1 cut(s) 778
BmgT120I GGNCC 1 cut(s) 778
BmiI GGNNCC 4 cut(s) 447, 1582, 1957, 2279
BmrFI CCNGG 2 cut(s) 1797, 1893
BmsI GCATC 3 cut(s) 103, 604, 2229
BoxI GACNNNNGTC 1 cut(s) 171
BpiI GAAGAC 3 cut(s) 275, 850, 1565
BpmI CTGGAG 1 cut(s) 2340
Bpu10I CCTNAGC 5 cut(s) 1383, 1629, 1960, 2063, 2151
Bpu14I TTCGAA 1 cut(s) 539
BpuEI CTTGAG 6 cut(s) 221, 1237, 1355, 1622, 1850, 1883
BpuMI CCSGG 2 cut(s) 1797, 1893
Bsa29I ATCGAT 1 cut(s) 2470
BsaAI YACGTR 1 cut(s) 2033
BsaBI GATNNNNATC 1 cut(s) 336
BsaI GGTCTC 2 cut(s) 1901, 2052
BsaJI CCNNGG 4 cut(s) 560, 814, 1136, 1977
BsaWI WCCGGW 1 cut(s) 2323
Bsc4I CCNNNNNNNGG 7 cut(s) 62, 787, 899, 1748, 1880, 1891, 2174
Bse1I ACTGG 6 cut(s) 306, 671, 1142, 1709, 2024, 2446
Bse3DI GCAATG 1 cut(s) 1109
Bse8I GATNNNNATC 1 cut(s) 336
BseCI ATCGAT 1 cut(s) 2470
BseDI CCNNGG 4 cut(s) 560, 814, 1136, 1977
BseGI GGATG 6 cut(s) 72, 310, 619, 775, 991, 1805
BseJI GATNNNNATC 1 cut(s) 336
BseLI CCNNNNNNNGG 7 cut(s) 62, 787, 899, 1748, 1880, 1891, 2174
BseMI GCAATG 1 cut(s) 1109
BseMII CTCAG 9 cut(s) 242, 429, 1392, 1620, 1827, 1974, 2068, 2077, 2165
BseNI ACTGG 6 cut(s) 306, 671, 1142, 1709, 2024, 2446
BseRI GAGGAG 1 cut(s) 1565
BseSI GKGCMC 1 cut(s) 1011
BseXI GCAGC 5 cut(s) 349, 803, 1621, 1951, 2385
BseYI CCCAGC 2 cut(s) 71, 1748
BsgI GTGCAG 1 cut(s) 2274
BshFI GGCC 4 cut(s) 528, 1141, 1884, 2090
BshVI ATCGAT 1 cut(s) 2470
BsiHKAI GWGCWC 3 cut(s) 936, 1011, 2356
BsiSI CCGG 3 cut(s) 1797, 1892, 2324
BslFI GGGAC 5 cut(s) 796, 1108, 1169, 1224, 2440
BslI CCNNNNNNNGG 7 cut(s) 62, 787, 899, 1748, 1880, 1891, 2174
BsmAI GTCTC 4 cut(s) 1502, 1901, 1976, 2052
BsmBI CGTCTC 1 cut(s) 1976
BsmFI GGGAC 5 cut(s) 796, 1108, 1169, 1224, 2440
BsmI GAATGC 1 cut(s) 1690
BsnI GGCC 4 cut(s) 528, 1141, 1884, 2090
Bso31I GGTCTC 2 cut(s) 1901, 2052
Bsp119I TTCGAA 1 cut(s) 539
Bsp1286I GDGCHC 3 cut(s) 936, 1011, 2356
Bsp19I CCATGG 1 cut(s) 560
BspACI CCGC 1 cut(s) 1953
BspANI GGCC 4 cut(s) 528, 1141, 1884, 2090
BspCNI CTCAG 9 cut(s) 241, 428, 1393, 1621, 1826, 1973, 2067, 2076, 2164
BspDI ATCGAT 1 cut(s) 2470
BspHI TCATGA 2 cut(s) 940, 1189
BspLI GGNNCC 4 cut(s) 447, 1582, 1957, 2279
BspMAI CTGCAG 1 cut(s) 648
BspPI GGATC 8 cut(s) 345, 440, 453, 1575, 1588, 2238, 2272, 2285
BspQI GCTCTTC 1 cut(s) 2426
BspT104I TTCGAA 1 cut(s) 539
BspTI CTTAAG 1 cut(s) 1556
BspTNI GGTCTC 2 cut(s) 1901, 2052
BsrDI GCAATG 1 cut(s) 1109
BsrI ACTGG 6 cut(s) 306, 671, 1142, 1709, 2024, 2446
BssECI CCNNGG 4 cut(s) 560, 814, 1136, 1977
BssSI CACGAG 1 cut(s) 747
BssT1I CCWWGG 3 cut(s) 560, 814, 1977
Bst2BI CACGAG 1 cut(s) 747
Bst4CI ACNGT 4 cut(s) 170, 849, 1454, 1781
Bst6I CTCTTC 3 cut(s) 278, 1512, 2426
BstAFI CTTAAG 1 cut(s) 1556
BstBAI YACGTR 1 cut(s) 2033
BstBI TTCGAA 1 cut(s) 539
BstC8I GCNNGC 3 cut(s) 1032, 1626, 1826
BstDSI CCRYGG 1 cut(s) 560
BstF5I GGATG 6 cut(s) 72, 310, 619, 775, 991, 1805
BstHHI GCGC 1 cut(s) 1856
BstMAI GTCTC 4 cut(s) 1502, 1901, 1976, 2052
BstMWI GCNNNNNNNGC 4 cut(s) 1031, 1634, 1651, 1814
BstNSI RCATGY 5 cut(s) 1034, 1748, 2005, 2047, 2368
BstPAI GACNNNNGTC 1 cut(s) 171
BstSCI CCNGG 2 cut(s) 1795, 1891
BstSFI CTRYAG 1 cut(s) 644
BstSLI GKGCMC 1 cut(s) 1011
BstV1I GCAGC 5 cut(s) 349, 803, 1621, 1951, 2385
BstV2I GAAGAC 3 cut(s) 275, 850, 1565
BstX2I RGATCY 3 cut(s) 445, 1580, 2277
BstYI RGATCY 3 cut(s) 445, 1580, 2277
Bsu15I ATCGAT 1 cut(s) 2470
BsuRI GGCC 4 cut(s) 528, 1141, 1884, 2090
BsuTUI ATCGAT 1 cut(s) 2470
BtgI CCRYGG 1 cut(s) 560
BtsCI GGATG 6 cut(s) 72, 310, 619, 775, 991, 1805
Cac8I GCNNGC 3 cut(s) 1032, 1626, 1826
CciI TCATGA 2 cut(s) 940, 1189
CfoI GCGC 1 cut(s) 1856
Cfr13I GGNCC 1 cut(s) 778
ClaI ATCGAT 1 cut(s) 2470
CseI GACGC 3 cut(s) 1023, 1221, 1993
Csp6I GTAC 3 cut(s) 299, 2443, 2449
CviQI GTAC 3 cut(s) 299, 2443, 2449
DraI TTTAAA 1 cut(s) 1519
DraIII CACNNNGTG 1 cut(s) 1997
EaeI YGGCCR 2 cut(s) 1882, 2088
Eam1104I CTCTTC 3 cut(s) 278, 1512, 2426
EarI CTCTTC 3 cut(s) 278, 1512, 2426
Ecl136II GAGCTC 1 cut(s) 934
Eco130I CCWWGG 3 cut(s) 560, 814, 1977
Eco24I GRGCYC 1 cut(s) 936
Eco31I GGTCTC 2 cut(s) 1901, 2052
Eco32I GATATC 1 cut(s) 1541
Eco47I GGWCC 1 cut(s) 778
Eco53kI GAGCTC 1 cut(s) 934
EcoICRI GAGCTC 1 cut(s) 934
EcoRI GAATTC 1 cut(s) 592
EcoRV GATATC 1 cut(s) 1541
EcoT14I CCWWGG 3 cut(s) 560, 814, 1977
EcoT22I ATGCAT 2 cut(s) 930, 1516
EcoT38I GRGCYC 1 cut(s) 936
ErhI CCWWGG 3 cut(s) 560, 814, 1977
Esp3I CGTCTC 1 cut(s) 1976
FalI AAGNNNNNCTT 4 cut(s) 1643, 1675, 1710, 1742
FaqI GGGAC 5 cut(s) 796, 1108, 1169, 1224, 2440
FbaI TGATCA 1 cut(s) 751
FblI GTMKAC 1 cut(s) 105
Fnu4HI GCNGC 5 cut(s) 363, 792, 1635, 1965, 2374
FokI GGATG 6 cut(s) 79, 317, 626, 782, 998, 1812
FriOI GRGCYC 1 cut(s) 936
Fsp4HI GCNGC 5 cut(s) 363, 792, 1635, 1965, 2374
FspBI CTAG 3 cut(s) 213, 530, 1494
FspI TGCGCA 1 cut(s) 1855
GlaI GCGC 1 cut(s) 1855
GluI GCNGC 5 cut(s) 363, 792, 1635, 1965, 2374
GsaI CCCAGC 2 cut(s) 75, 1752
GsuI CTGGAG 1 cut(s) 2340
HaeIII GGCC 4 cut(s) 528, 1141, 1884, 2090
HapII CCGG 3 cut(s) 1797, 1892, 2324
HgaI GACGC 3 cut(s) 1023, 1221, 1993
HhaI GCGC 1 cut(s) 1856
Hin6I GCGC 1 cut(s) 1854
HinP1I GCGC 1 cut(s) 1854
HincII GTYRAC 3 cut(s) 1457, 1491, 2391
HindII GTYRAC 3 cut(s) 1457, 1491, 2391
HindIII AAGCTT 2 cut(s) 1385, 1826
HinfI GANTC 9 cut(s) 203, 322, 493, 663, 1234, 1262, 1616, 2072, 2308
HpaI GTTAAC 1 cut(s) 1491
HpaII CCGG 3 cut(s) 1797, 1892, 2324
HphI GGTGA 1 cut(s) 917
Hpy166II GTNNAC 6 cut(s) 106, 1009, 1457, 1491, 1865, 2391
Hpy188I TCNGA 7 cut(s) 255, 1137, 1545, 1694, 2057, 2273, 2349
Hpy8I GTNNAC 6 cut(s) 106, 1009, 1457, 1491, 1865, 2391
HpyCH4III ACNGT 4 cut(s) 170, 849, 1454, 1781
HpyCH4IV ACGT 1 cut(s) 2032
HpyF10VI GCNNNNNNNGC 4 cut(s) 1031, 1634, 1651, 1814
HpySE526I ACGT 1 cut(s) 2032
HspAI GCGC 1 cut(s) 1854
Ksp22I TGATCA 1 cut(s) 751
KspAI GTTAAC 1 cut(s) 1491
LguI GCTCTTC 1 cut(s) 2426
LmnI GCTCC 4 cut(s) 375, 1552, 1672, 2359
Lsp1109I GCAGC 5 cut(s) 349, 803, 1621, 1951, 2385
LweI GCATC 3 cut(s) 103, 604, 2229
MaeI CTAG 3 cut(s) 213, 530, 1494
MaeII ACGT 1 cut(s) 2032
MaeIII GTNAC 8 cut(s) 125, 455, 1289, 1761, 1775, 1997, 2015, 2033
MflI RGATCY 3 cut(s) 445, 1580, 2277
MhlI GDGCHC 3 cut(s) 936, 1011, 2356
MlsI TGGCCA 2 cut(s) 1884, 2090
MluNI TGGCCA 2 cut(s) 1884, 2090
MlyI GAGTC 2 cut(s) 212, 1243
MmeI TCCRAC 3 cut(s) 805, 820, 1650
Mox20I TGGCCA 2 cut(s) 1884, 2090
Mph1103I ATGCAT 2 cut(s) 930, 1516
MroXI GAANNNNTTC 4 cut(s) 43, 223, 1506, 1869
MscI TGGCCA 2 cut(s) 1884, 2090
MseI TTAA 7 cut(s) 498, 623, 1409, 1422, 1490, 1518, 1557
MslI CAYNNNNRTG 1 cut(s) 2125
Msp20I TGGCCA 2 cut(s) 1884, 2090
MspA1I CMGCKG 1 cut(s) 1964
MspCI CTTAAG 1 cut(s) 1556
MspI CCGG 3 cut(s) 1797, 1892, 2324
MspR9I CCNGG 2 cut(s) 1797, 1893
Mva1269I GAATGC 1 cut(s) 1690
MwoI GCNNNNNNNGC 4 cut(s) 1031, 1634, 1651, 1814
NciI CCSGG 2 cut(s) 1797, 1893
NcoI CCATGG 1 cut(s) 560
NlaIV GGNNCC 4 cut(s) 447, 1582, 1957, 2279
NmeAIII GCCGAG 1 cut(s) 1006
NmuCI GTSAC 3 cut(s) 455, 1997, 2033
NsbI TGCGCA 1 cut(s) 1855
NsiI ATGCAT 2 cut(s) 930, 1516
NspI RCATGY 5 cut(s) 1034, 1748, 2005, 2047, 2368
NspV TTCGAA 1 cut(s) 539
PaeI GCATGC 1 cut(s) 1034
PagI TCATGA 2 cut(s) 940, 1189
PciI ACATGT 1 cut(s) 2364
PciSI GCTCTTC 1 cut(s) 2426
PctI GAATGC 1 cut(s) 1690
PdmI GAANNNNTTC 4 cut(s) 43, 223, 1506, 1869
PfeI GAWTC 7 cut(s) 322, 493, 663, 1262, 1616, 2072, 2308
PflFI GACNNNGTC 1 cut(s) 1452
PflMI CCANNNNNTGG 2 cut(s) 899, 1748
PfoI TCCNGGA 1 cut(s) 1795
PkrI GCNGC 5 cut(s) 364, 793, 1636, 1966, 2375
PleI GAGTC 2 cut(s) 211, 1242
PpsI GAGTC 2 cut(s) 211, 1242
Ppu21I YACGTR 1 cut(s) 2033
PscI ACATGT 1 cut(s) 2364
PshAI GACNNNNGTC 1 cut(s) 171
Psp124BI GAGCTC 1 cut(s) 936
PspFI CCCAGC 2 cut(s) 71, 1748
PspN4I GGNNCC 4 cut(s) 447, 1582, 1957, 2279
PspPI GGNCC 1 cut(s) 778
PstI CTGCAG 1 cut(s) 648
PsuI RGATCY 3 cut(s) 445, 1580, 2277
PsyI GACNNNGTC 1 cut(s) 1452
PvuII CAGCTG 1 cut(s) 1964
RsaI GTAC 3 cut(s) 300, 2444, 2450
RsaNI GTAC 3 cut(s) 299, 2443, 2449
RseI CAYNNNNRTG 1 cut(s) 2125
SacI GAGCTC 1 cut(s) 936
SapI GCTCTTC 1 cut(s) 2426
SaqAI TTAA 7 cut(s) 498, 623, 1409, 1422, 1490, 1518, 1557
SatI GCNGC 5 cut(s) 363, 792, 1635, 1965, 2374
Sau96I GGNCC 1 cut(s) 778
ScaI AGTACT 1 cut(s) 2450
SchI GAGTC 2 cut(s) 212, 1243
ScrFI CCNGG 2 cut(s) 1797, 1893
SduI GDGCHC 3 cut(s) 936, 1011, 2356
SfaNI GCATC 3 cut(s) 103, 604, 2229
SfcI CTRYAG 1 cut(s) 644
SfuI TTCGAA 1 cut(s) 539
SinI GGWCC 1 cut(s) 778
SmiMI CAYNNNNRTG 1 cut(s) 2125
SmlI CTYRAG 7 cut(s) 200, 1216, 1370, 1556, 1601, 1829, 1898
SmoI CTYRAG 7 cut(s) 200, 1216, 1370, 1556, 1601, 1829, 1898
SpeI ACTAGT 1 cut(s) 1493
SphI GCATGC 1 cut(s) 1034
SsiI CCGC 1 cut(s) 1953
SspI AATATT 1 cut(s) 898
SspMI CTAG 3 cut(s) 213, 530, 1494
SstI GAGCTC 1 cut(s) 936
StyD4I CCNGG 2 cut(s) 1795, 1891
StyI CCWWGG 3 cut(s) 560, 814, 1977
TaaI ACNGT 4 cut(s) 170, 849, 1454, 1781
TaiI ACGT 1 cut(s) 2035
TaqI TCGA 4 cut(s) 397, 539, 1500, 2470
TatI WGTACW 2 cut(s) 298, 2448
TfiI GAWTC 7 cut(s) 322, 493, 663, 1262, 1616, 2072, 2308
Tru1I TTAA 7 cut(s) 498, 623, 1409, 1422, 1490, 1518, 1557
Tru9I TTAA 7 cut(s) 498, 623, 1409, 1422, 1490, 1518, 1557
TseFI GTSAC 3 cut(s) 455, 1997, 2033
TseI GCWGC 5 cut(s) 362, 791, 1634, 1964, 2373
Tsp45I GTSAC 3 cut(s) 455, 1997, 2033
TspDTI ATGAA 8 cut(s) 17, 929, 1062, 1206, 1382, 1499, 2091, 2096
Tth111I GACNNNGTC 1 cut(s) 1452
Van91I CCANNNNNTGG 2 cut(s) 899, 1748
Vha464I CTTAAG 1 cut(s) 1556
VneI GTGCAC 1 cut(s) 1007
VpaK11BI GGWCC 1 cut(s) 778
XapI RAATTY 6 cut(s) 131, 405, 592, 1193, 1228, 1273
XceI RCATGY 5 cut(s) 1034, 1748, 2005, 2047, 2368
XmiI GTMKAC 1 cut(s) 105
XmnI GAANNNNTTC 4 cut(s) 43, 223, 1506, 1869
XspI CTAG 3 cut(s) 213, 530, 1494
ZrmI AGTACT 1 cut(s) 2450
Zsp2I ATGCAT 2 cut(s) 930, 1516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.