disease resistance
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 18 - 98 | 4.2e-09 | Rx N-terminal domain |
| NB-ARC | PF00931 | 176 - 342 | 1.4e-28 | NB-ARC domain |
| WHD_DRP | PF23559 | 426 - 492 | 2.2e-23 | Disease resistance protein Winged helix domain |
| LRR_8 | PF13855 | 564 - 614 | 6.1e-08 | Leucine rich repeat |
| LRR_14 | PF23598 | 577 - 868 | 2.3e-30 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 691 - 816 | 6.7e-38 | R13L1/DRL21 LRRs |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 2380 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2273 |
| AccI | GTMKAC | 2 cut(s) | 117, 642 |
| AccII | CGCG | 1 cut(s) | 200 |
| AciI | CCGC | 2 cut(s) | 200, 896 |
| AcoI | YGGCCR | 2 cut(s) | 2407, 2616 |
| AcsI | RAATTY | 7 cut(s) | 80, 668, 942, 1129, 1718, 1753, 1798 |
| AcuI | CTGAAG | 3 cut(s) | 38, 173, 273 |
| AdeI | CACNNNGTG | 1 cut(s) | 2525 |
| AfaI | GTAC | 6 cut(s) | 24, 333, 484, 837, 2972, 2978 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 599, 1324, 2273, 2405, 2702 |
| AflII | CTTAAG | 1 cut(s) | 2081 |
| AflIII | ACRYGT | 2 cut(s) | 102, 2892 |
| AhlI | ACTAGT | 2 cut(s) | 236, 2018 |
| AjiI | CACGTC | 1 cut(s) | 658 |
| AjnI | CCWGG | 1 cut(s) | 18 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1295, 1327 |
| Alw21I | GWGCWC | 3 cut(s) | 1461, 1536, 2884 |
| Alw26I | GTCTC | 4 cut(s) | 93, 2027, 2504, 2580 |
| Alw44I | GTGCAC | 1 cut(s) | 1532 |
| AoxI | GGCC | 4 cut(s) | 1063, 1664, 2407, 2616 |
| ApaLI | GTGCAC | 1 cut(s) | 1532 |
| ApeKI | GCWGC | 8 cut(s) | 148, 206, 899, 1328, 2159, 2492, 2673, 2901 |
| ApoI | RAATTY | 7 cut(s) | 80, 668, 942, 1129, 1718, 1753, 1798 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 226, 258, 2715, 2747 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 216, 580, 760, 2031, 2394 |
| AspLEI | GCGC | 1 cut(s) | 2381 |
| AspS9I | GGNCC | 1 cut(s) | 1315 |
| AsuC2I | CCSGG | 1 cut(s) | 2322 |
| AsuHPI | GGTGA | 2 cut(s) | 1715, 2845 |
| AvaII | GGWCC | 1 cut(s) | 1315 |
| BaeGI | GKGCMC | 1 cut(s) | 1536 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2293, 2326 |
| BalI | TGGCCA | 2 cut(s) | 2409, 2618 |
| BamHI | GGATCC | 3 cut(s) | 982, 2105, 2805 |
| BanII | GRGCYC | 1 cut(s) | 1461 |
| BauI | CACGAG | 2 cut(s) | 165, 1284 |
| BbsI | GAAGAC | 3 cut(s) | 812, 1387, 2090 |
| Bbv12I | GWGCWC | 3 cut(s) | 1461, 1536, 2884 |
| BbvCI | CCTCAGC | 5 cut(s) | 1622, 2154, 2488, 2591, 2679 |
| BbvI | GCAGC | 8 cut(s) | 135, 218, 886, 1340, 2146, 2479, 2660, 2913 |
| BccI | CCATC | 7 cut(s) | 836, 1135, 1660, 1778, 2319, 2719, 2796 |
| BciT130I | CCWGG | 1 cut(s) | 20 |
| BciVI | GTATCC | 2 cut(s) | 514, 2294 |
| BclI | TGATCA | 1 cut(s) | 1288 |
| BcnI | CCSGG | 1 cut(s) | 2322 |
| BcoDI | GTCTC | 4 cut(s) | 93, 2027, 2504, 2580 |
| BcuI | ACTAGT | 2 cut(s) | 236, 2018 |
| BfaI | CTAG | 5 cut(s) | 237, 416, 839, 1067, 2019 |
| BfmI | CTRYAG | 1 cut(s) | 1181 |
| BfrI | CTTAAG | 1 cut(s) | 2081 |
| BfuI | GTATCC | 2 cut(s) | 514, 2294 |
| BisI | GCNGC | 9 cut(s) | 149, 207, 897, 900, 1329, 2160, 2493, 2674, 2902 |
| BlsI | GCNGC | 9 cut(s) | 150, 208, 898, 901, 1330, 2161, 2494, 2675, 2903 |
| BmcAI | AGTACT | 1 cut(s) | 2978 |
| Bme1390I | CCNGG | 2 cut(s) | 20, 2322 |
| Bme18I | GGWCC | 1 cut(s) | 1315 |
| BmgBI | CACGTC | 1 cut(s) | 658 |
| BmgT120I | GGNCC | 1 cut(s) | 1315 |
| BmiI | GGNNCC | 4 cut(s) | 984, 2107, 2485, 2807 |
| BmrFI | CCNGG | 2 cut(s) | 20, 2322 |
| BmrI | ACTGGG | 1 cut(s) | 120 |
| BmsI | GCATC | 8 cut(s) | 23, 204, 238, 372, 640, 1141, 1727, 2757 |
| BmuI | ACTGGG | 1 cut(s) | 120 |
| BoxI | GACNNNNGTC | 1 cut(s) | 708 |
| BpiI | GAAGAC | 3 cut(s) | 812, 1387, 2090 |
| BpmI | CTGGAG | 2 cut(s) | 771, 2868 |
| Bpu10I | CCTNAGC | 6 cut(s) | 1622, 1908, 2154, 2488, 2591, 2679 |
| BpuEI | CTTGAG | 6 cut(s) | 758, 1762, 1880, 2147, 2375, 2408 |
| BpuMI | CCSGG | 1 cut(s) | 2322 |
| BsaAI | YACGTR | 1 cut(s) | 2561 |
| BsaBI | GATNNNNATC | 1 cut(s) | 873 |
| BsaI | GGTCTC | 1 cut(s) | 2580 |
| BsaJI | CCNNGG | 4 cut(s) | 18, 1097, 1351, 1661 |
| BsaWI | WCCGGW | 1 cut(s) | 2851 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 599, 1324, 2273, 2405, 2702 |
| Bse118I | RCCGGY | 1 cut(s) | 32 |
| Bse1I | ACTGG | 8 cut(s) | 115, 288, 754, 1208, 1667, 2234, 2552, 2974 |
| Bse3DI | GCAATG | 3 cut(s) | 190, 1522, 1634 |
| Bse8I | GATNNNNATC | 1 cut(s) | 873 |
| BseBI | CCWGG | 1 cut(s) | 20 |
| BseDI | CCNNGG | 4 cut(s) | 18, 1097, 1351, 1661 |
| BseGI | GGATG | 9 cut(s) | 14, 253, 310, 403, 1156, 1312, 1742, 2330, 2711 |
| BseJI | GATNNNNATC | 1 cut(s) | 873 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 599, 1324, 2273, 2405, 2702 |
| BseMI | GCAATG | 3 cut(s) | 190, 1522, 1634 |
| BseNI | ACTGG | 8 cut(s) | 115, 288, 754, 1208, 1667, 2234, 2552, 2974 |
| BseRI | GAGGAG | 1 cut(s) | 2090 |
| BseSI | GKGCMC | 1 cut(s) | 1536 |
| BseXI | GCAGC | 8 cut(s) | 135, 218, 886, 1340, 2146, 2479, 2660, 2913 |
| BseYI | CCCAGC | 2 cut(s) | 608, 2273 |
| BsgI | GTGCAG | 1 cut(s) | 2802 |
| Bsh1236I | CGCG | 1 cut(s) | 200 |
| BshFI | GGCC | 4 cut(s) | 1065, 1666, 2409, 2618 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1461, 1536, 2884 |
| BsiSI | CCGG | 4 cut(s) | 33, 2322, 2534, 2852 |
| BslFI | GGGAC | 4 cut(s) | 294, 1333, 1694, 2968 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 599, 1324, 2273, 2405, 2702 |
| BsmAI | GTCTC | 4 cut(s) | 93, 2027, 2504, 2580 |
| BsmBI | CGTCTC | 1 cut(s) | 2504 |
| BsmFI | GGGAC | 4 cut(s) | 294, 1333, 1694, 2968 |
| BsmI | GAATGC | 1 cut(s) | 2215 |
| BsnI | GGCC | 4 cut(s) | 1065, 1666, 2409, 2618 |
| Bso31I | GGTCTC | 1 cut(s) | 2580 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1461, 1536, 2884 |
| Bsp19I | CCATGG | 1 cut(s) | 1097 |
| BspACI | CCGC | 2 cut(s) | 200, 896 |
| BspANI | GGCC | 4 cut(s) | 1065, 1666, 2409, 2618 |
| BspFNI | CGCG | 1 cut(s) | 200 |
| BspHI | TCATGA | 3 cut(s) | 1465, 1714, 2635 |
| BspLI | GGNNCC | 4 cut(s) | 984, 2107, 2485, 2807 |
| BspMAI | CTGCAG | 1 cut(s) | 1185 |
| BspQI | GCTCTTC | 1 cut(s) | 2954 |
| BspTI | CTTAAG | 1 cut(s) | 2081 |
| BspTNI | GGTCTC | 1 cut(s) | 2580 |
| BsrDI | GCAATG | 3 cut(s) | 190, 1522, 1634 |
| BsrFI | RCCGGY | 1 cut(s) | 32 |
| BsrI | ACTGG | 8 cut(s) | 115, 288, 754, 1208, 1667, 2234, 2552, 2974 |
| BssAI | RCCGGY | 1 cut(s) | 32 |
| BssECI | CCNNGG | 4 cut(s) | 18, 1097, 1351, 1661 |
| BssSI | CACGAG | 2 cut(s) | 165, 1284 |
| BssT1I | CCWWGG | 2 cut(s) | 1097, 1351 |
| Bst2BI | CACGAG | 2 cut(s) | 165, 1284 |
| Bst2UI | CCWGG | 1 cut(s) | 20 |
| Bst4CI | ACNGT | 5 cut(s) | 320, 366, 1386, 1979, 2306 |
| Bst6I | CTCTTC | 4 cut(s) | 134, 815, 2037, 2954 |
| BstAFI | CTTAAG | 1 cut(s) | 2081 |
| BstBAI | YACGTR | 1 cut(s) | 2561 |
| BstC8I | GCNNGC | 3 cut(s) | 1557, 2151, 2351 |
| BstDSI | CCRYGG | 1 cut(s) | 1097 |
| BstF5I | GGATG | 9 cut(s) | 14, 253, 310, 403, 1156, 1312, 1742, 2330, 2711 |
| BstFNI | CGCG | 1 cut(s) | 200 |
| BstHHI | GCGC | 1 cut(s) | 2381 |
| BstMAI | GTCTC | 4 cut(s) | 93, 2027, 2504, 2580 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 11, 206, 1556, 2159, 2176, 2339 |
| BstNI | CCWGG | 1 cut(s) | 20 |
| BstNSI | RCATGY | 6 cut(s) | 106, 1559, 2273, 2533, 2575, 2896 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 708 |
| BstSCI | CCNGG | 2 cut(s) | 18, 2320 |
| BstSFI | CTRYAG | 1 cut(s) | 1181 |
| BstSLI | GKGCMC | 1 cut(s) | 1536 |
| BstUI | CGCG | 1 cut(s) | 200 |
| BstV1I | GCAGC | 8 cut(s) | 135, 218, 886, 1340, 2146, 2479, 2660, 2913 |
| BstV2I | GAAGAC | 3 cut(s) | 812, 1387, 2090 |
| BstX2I | RGATCY | 3 cut(s) | 982, 2105, 2805 |
| BstYI | RGATCY | 3 cut(s) | 982, 2105, 2805 |
| BsuI | GTATCC | 2 cut(s) | 514, 2294 |
| BsuRI | GGCC | 4 cut(s) | 1065, 1666, 2409, 2618 |
| BtgI | CCRYGG | 1 cut(s) | 1097 |
| BtgZI | GCGATG | 1 cut(s) | 181 |
| BtrI | CACGTC | 1 cut(s) | 658 |
| BtsCI | GGATG | 9 cut(s) | 14, 253, 310, 403, 1156, 1312, 1742, 2330, 2711 |
| BtsIMutI | CAGTG | 2 cut(s) | 108, 485 |
| Cac8I | GCNNGC | 3 cut(s) | 1557, 2151, 2351 |
| CciI | TCATGA | 3 cut(s) | 1465, 1714, 2635 |
| CfoI | GCGC | 1 cut(s) | 2381 |
| Cfr10I | RCCGGY | 1 cut(s) | 32 |
| Cfr13I | GGNCC | 1 cut(s) | 1315 |
| CseI | GACGC | 2 cut(s) | 1548, 2521 |
| Csp6I | GTAC | 6 cut(s) | 23, 332, 483, 836, 2971, 2977 |
| CviQI | GTAC | 6 cut(s) | 23, 332, 483, 836, 2971, 2977 |
| DraI | TTTAAA | 1 cut(s) | 2044 |
| DraIII | CACNNNGTG | 1 cut(s) | 2525 |
| EaeI | YGGCCR | 2 cut(s) | 2407, 2616 |
| Eam1104I | CTCTTC | 4 cut(s) | 134, 815, 2037, 2954 |
| EarI | CTCTTC | 4 cut(s) | 134, 815, 2037, 2954 |
| Ecl136II | GAGCTC | 1 cut(s) | 1459 |
| Eco130I | CCWWGG | 2 cut(s) | 1097, 1351 |
| Eco24I | GRGCYC | 1 cut(s) | 1461 |
| Eco31I | GGTCTC | 1 cut(s) | 2580 |
| Eco32I | GATATC | 1 cut(s) | 2066 |
| Eco47I | GGWCC | 1 cut(s) | 1315 |
| Eco53kI | GAGCTC | 1 cut(s) | 1459 |
| Eco57I | CTGAAG | 3 cut(s) | 38, 173, 273 |
| EcoICRI | GAGCTC | 1 cut(s) | 1459 |
| EcoRI | GAATTC | 2 cut(s) | 1129, 1718 |
| EcoRII | CCWGG | 1 cut(s) | 18 |
| EcoRV | GATATC | 1 cut(s) | 2066 |
| EcoT14I | CCWWGG | 2 cut(s) | 1097, 1351 |
| EcoT22I | ATGCAT | 2 cut(s) | 1455, 2041 |
| EcoT38I | GRGCYC | 1 cut(s) | 1461 |
| ErhI | CCWWGG | 2 cut(s) | 1097, 1351 |
| Esp3I | CGTCTC | 1 cut(s) | 2504 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 204, 236, 280, 312, 2168, 2200, 2235, 2267 |
| FaqI | GGGAC | 4 cut(s) | 294, 1333, 1694, 2968 |
| FbaI | TGATCA | 1 cut(s) | 1288 |
| FblI | GTMKAC | 2 cut(s) | 117, 642 |
| Fnu4HI | GCNGC | 9 cut(s) | 149, 207, 897, 900, 1329, 2160, 2493, 2674, 2902 |
| FokI | GGATG | 8 cut(s) | 260, 317, 410, 1163, 1319, 1749, 2337, 2698 |
| FriOI | GRGCYC | 1 cut(s) | 1461 |
| Fsp4HI | GCNGC | 9 cut(s) | 149, 207, 897, 900, 1329, 2160, 2493, 2674, 2902 |
| FspBI | CTAG | 5 cut(s) | 237, 416, 839, 1067, 2019 |
| FspI | TGCGCA | 1 cut(s) | 2380 |
| GlaI | GCGC | 1 cut(s) | 2380 |
| GluI | GCNGC | 9 cut(s) | 149, 207, 897, 900, 1329, 2160, 2493, 2674, 2902 |
| GsaI | CCCAGC | 2 cut(s) | 612, 2277 |
| GsuI | CTGGAG | 2 cut(s) | 771, 2868 |
| HaeIII | GGCC | 4 cut(s) | 1065, 1666, 2409, 2618 |
| HapII | CCGG | 4 cut(s) | 33, 2322, 2534, 2852 |
| HgaI | GACGC | 2 cut(s) | 1548, 2521 |
| HhaI | GCGC | 1 cut(s) | 2381 |
| Hin6I | GCGC | 1 cut(s) | 2379 |
| HinP1I | GCGC | 1 cut(s) | 2379 |
| HincII | GTYRAC | 6 cut(s) | 67, 118, 316, 1982, 2016, 2919 |
| HindII | GTYRAC | 6 cut(s) | 67, 118, 316, 1982, 2016, 2919 |
| HindIII | AAGCTT | 3 cut(s) | 775, 1910, 2351 |
| HpaI | GTTAAC | 1 cut(s) | 2016 |
| HpaII | CCGG | 4 cut(s) | 33, 2322, 2534, 2852 |
| HphI | GGTGA | 2 cut(s) | 1715, 2845 |
| Hpy99I | CGWCG | 2 cut(s) | 46, 122 |
| HpyCH4III | ACNGT | 5 cut(s) | 320, 366, 1386, 1979, 2306 |
| HpyCH4IV | ACGT | 4 cut(s) | 41, 334, 657, 2560 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 11, 206, 1556, 2159, 2176, 2339 |
| HpySE526I | ACGT | 4 cut(s) | 41, 334, 657, 2560 |
| HspAI | GCGC | 1 cut(s) | 2379 |
| Ksp22I | TGATCA | 1 cut(s) | 1288 |
| KspAI | GTTAAC | 1 cut(s) | 2016 |
| LguI | GCTCTTC | 1 cut(s) | 2954 |
| LmnI | GCTCC | 4 cut(s) | 912, 2077, 2197, 2887 |
| Lsp1109I | GCAGC | 8 cut(s) | 135, 218, 886, 1340, 2146, 2479, 2660, 2913 |
| LweI | GCATC | 8 cut(s) | 23, 204, 238, 372, 640, 1141, 1727, 2757 |
| MaeI | CTAG | 5 cut(s) | 237, 416, 839, 1067, 2019 |
| MaeII | ACGT | 4 cut(s) | 41, 334, 657, 2560 |
| MaeIII | GTNAC | 8 cut(s) | 335, 406, 992, 1814, 2286, 2525, 2543, 2561 |
| MfeI | CAATTG | 1 cut(s) | 954 |
| MflI | RGATCY | 3 cut(s) | 982, 2105, 2805 |
| MhlI | GDGCHC | 3 cut(s) | 1461, 1536, 2884 |
| MlsI | TGGCCA | 2 cut(s) | 2409, 2618 |
| MluNI | TGGCCA | 2 cut(s) | 2409, 2618 |
| MlyI | GAGTC | 4 cut(s) | 81, 334, 749, 1768 |
| MmeI | TCCRAC | 4 cut(s) | 302, 1342, 1357, 2175 |
| Mox20I | TGGCCA | 2 cut(s) | 2409, 2618 |
| Mph1103I | ATGCAT | 2 cut(s) | 1455, 2041 |
| MroXI | GAANNNNTTC | 5 cut(s) | 216, 580, 760, 2031, 2394 |
| MscI | TGGCCA | 2 cut(s) | 2409, 2618 |
| MseI | TTAA | 8 cut(s) | 375, 540, 1160, 1934, 1947, 2015, 2043, 2082 |
| MslI | CAYNNNNRTG | 2 cut(s) | 437, 2653 |
| Msp20I | TGGCCA | 2 cut(s) | 2409, 2618 |
| MspA1I | CMGCKG | 1 cut(s) | 2492 |
| MspCI | CTTAAG | 1 cut(s) | 2081 |
| MspI | CCGG | 4 cut(s) | 33, 2322, 2534, 2852 |
| MspR9I | CCNGG | 2 cut(s) | 20, 2322 |
| MunI | CAATTG | 1 cut(s) | 954 |
| Mva1269I | GAATGC | 1 cut(s) | 2215 |
| MvaI | CCWGG | 1 cut(s) | 20 |
| MvnI | CGCG | 1 cut(s) | 200 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 11, 206, 1556, 2159, 2176, 2339 |
| NciI | CCSGG | 1 cut(s) | 2322 |
| NcoI | CCATGG | 1 cut(s) | 1097 |
| NlaIV | GGNNCC | 4 cut(s) | 984, 2107, 2485, 2807 |
| NmeAIII | GCCGAG | 1 cut(s) | 1531 |
| NmuCI | GTSAC | 4 cut(s) | 335, 992, 2525, 2561 |
| NsbI | TGCGCA | 1 cut(s) | 2380 |
| NsiI | ATGCAT | 2 cut(s) | 1455, 2041 |
| NspI | RCATGY | 6 cut(s) | 106, 1559, 2273, 2533, 2575, 2896 |
| PaeI | GCATGC | 1 cut(s) | 1559 |
| PagI | TCATGA | 3 cut(s) | 1465, 1714, 2635 |
| PciI | ACATGT | 2 cut(s) | 102, 2892 |
| PciSI | GCTCTTC | 1 cut(s) | 2954 |
| PctI | GAATGC | 1 cut(s) | 2215 |
| PdmI | GAANNNNTTC | 5 cut(s) | 216, 580, 760, 2031, 2394 |
| PfeI | GAWTC | 9 cut(s) | 157, 500, 1030, 1200, 1787, 2122, 2141, 2600, 2836 |
| PflFI | GACNNNGTC | 2 cut(s) | 71, 1977 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2273 |
| PfoI | TCCNGGA | 1 cut(s) | 2320 |
| PkrI | GCNGC | 9 cut(s) | 150, 208, 898, 901, 1330, 2161, 2494, 2675, 2903 |
| PleI | GAGTC | 4 cut(s) | 80, 333, 748, 1767 |
| PpsI | GAGTC | 4 cut(s) | 80, 333, 748, 1767 |
| Ppu21I | YACGTR | 1 cut(s) | 2561 |
| PscI | ACATGT | 2 cut(s) | 102, 2892 |
| PshAI | GACNNNNGTC | 1 cut(s) | 708 |
| Psp124BI | GAGCTC | 1 cut(s) | 1461 |
| Psp6I | CCWGG | 1 cut(s) | 18 |
| PspFI | CCCAGC | 2 cut(s) | 608, 2273 |
| PspGI | CCWGG | 1 cut(s) | 18 |
| PspN4I | GGNNCC | 4 cut(s) | 984, 2107, 2485, 2807 |
| PspPI | GGNCC | 1 cut(s) | 1315 |
| PstI | CTGCAG | 1 cut(s) | 1185 |
| PsuI | RGATCY | 3 cut(s) | 982, 2105, 2805 |
| PsyI | GACNNNGTC | 2 cut(s) | 71, 1977 |
| PvuII | CAGCTG | 1 cut(s) | 2492 |
| RsaI | GTAC | 6 cut(s) | 24, 333, 484, 837, 2972, 2978 |
| RsaNI | GTAC | 6 cut(s) | 23, 332, 483, 836, 2971, 2977 |
| RseI | CAYNNNNRTG | 2 cut(s) | 437, 2653 |
| SacI | GAGCTC | 1 cut(s) | 1461 |
| SalI | GTCGAC | 1 cut(s) | 116 |
| SapI | GCTCTTC | 1 cut(s) | 2954 |
| SaqAI | TTAA | 8 cut(s) | 375, 540, 1160, 1934, 1947, 2015, 2043, 2082 |
| SatI | GCNGC | 9 cut(s) | 149, 207, 897, 900, 1329, 2160, 2493, 2674, 2902 |
| Sau96I | GGNCC | 1 cut(s) | 1315 |
| ScaI | AGTACT | 1 cut(s) | 2978 |
| SchI | GAGTC | 4 cut(s) | 81, 334, 749, 1768 |
| ScrFI | CCNGG | 2 cut(s) | 20, 2322 |
| SduI | GDGCHC | 3 cut(s) | 1461, 1536, 2884 |
| SfaNI | GCATC | 8 cut(s) | 23, 204, 238, 372, 640, 1141, 1727, 2757 |
| SfcI | CTRYAG | 1 cut(s) | 1181 |
| SinI | GGWCC | 1 cut(s) | 1315 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 437, 2653 |
| SmlI | CTYRAG | 7 cut(s) | 737, 1741, 1895, 2081, 2126, 2354, 2423 |
| SmoI | CTYRAG | 7 cut(s) | 737, 1741, 1895, 2081, 2126, 2354, 2423 |
| SpeI | ACTAGT | 2 cut(s) | 236, 2018 |
| SphI | GCATGC | 1 cut(s) | 1559 |
| SsiI | CCGC | 2 cut(s) | 200, 896 |
| SspMI | CTAG | 5 cut(s) | 237, 416, 839, 1067, 2019 |
| SstI | GAGCTC | 1 cut(s) | 1461 |
| StyD4I | CCNGG | 2 cut(s) | 18, 2320 |
| StyI | CCWWGG | 2 cut(s) | 1097, 1351 |
| TaaI | ACNGT | 5 cut(s) | 320, 366, 1386, 1979, 2306 |
| TaiI | ACGT | 4 cut(s) | 44, 337, 660, 2563 |
| TaqI | TCGA | 4 cut(s) | 117, 934, 1392, 2025 |
| TatI | WGTACW | 3 cut(s) | 482, 835, 2976 |
| TauI | GCSGC | 1 cut(s) | 899 |
| TfiI | GAWTC | 9 cut(s) | 157, 500, 1030, 1200, 1787, 2122, 2141, 2600, 2836 |
| Tru1I | TTAA | 8 cut(s) | 375, 540, 1160, 1934, 1947, 2015, 2043, 2082 |
| Tru9I | TTAA | 8 cut(s) | 375, 540, 1160, 1934, 1947, 2015, 2043, 2082 |
| TscAI | CASTG | 2 cut(s) | 115, 485 |
| TseFI | GTSAC | 4 cut(s) | 335, 992, 2525, 2561 |
| TseI | GCWGC | 8 cut(s) | 148, 206, 899, 1328, 2159, 2492, 2673, 2901 |
| Tsp45I | GTSAC | 4 cut(s) | 335, 992, 2525, 2561 |
| TspDTI | ATGAA | 8 cut(s) | 513, 1454, 1587, 1731, 1907, 2024, 2619, 2624 |
| TspRI | CASTG | 2 cut(s) | 115, 485 |
| Tth111I | GACNNNGTC | 2 cut(s) | 71, 1977 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2273 |
| Vha464I | CTTAAG | 1 cut(s) | 2081 |
| VneI | GTGCAC | 1 cut(s) | 1532 |
| VpaK11BI | GGWCC | 1 cut(s) | 1315 |
| XapI | RAATTY | 7 cut(s) | 80, 668, 942, 1129, 1718, 1753, 1798 |
| XceI | RCATGY | 6 cut(s) | 106, 1559, 2273, 2533, 2575, 2896 |
| XmiI | GTMKAC | 2 cut(s) | 117, 642 |
| XmnI | GAANNNNTTC | 5 cut(s) | 216, 580, 760, 2031, 2394 |
| XspI | CTAG | 5 cut(s) | 237, 416, 839, 1067, 2019 |
| ZrmI | AGTACT | 1 cut(s) | 2978 |
| Zsp2I | ATGCAT | 2 cut(s) | 1455, 2041 |