Rorug06G0135500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0002183
Physical Location & Seq
Forward (+)
19159544 .. 19162810
3267 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0135500.1

Sequence Viewer

Length: 2667 bp
ATGGAGATAGAAAAGACACCAAAAGAACCCAAAAAGAAGTATCTTTTTCTATCCTCCTTGCCATCATTGTCATCATCATTAACGTCGAGATACATGATGGCTATCCTCCTGGTCTTTGTCTATGCACTTCTCTACAACCCCACCATTGTCCTCTCTGACCCTTCCCCCACCACCTTCACCCCCCAAGACAACTTCCTCATCGACTGCGGTGCTGCAAACGCTCCCACACTACCCGATGGAAGGACCTTCAAGACTGATTCACAATCATCGCAACATTTGAAAGCAAATGATGATAACAAGGTGTCTGATGACAAGGCAGATGTGCCTTCTCCTCTTTACAAAACCGCAAGGATTTTCACAAGTGAAGCCACTTATACGTTCCACATGGGAAGTCCTGGGTGGCATTGGGTTCGCCTCTATTTCTATCCCATTCAAAACTCTGTGTCTGATCTTCAGAAGGCAACTTTCAATGTCATGACAGATAAGTACACTTTGCTCCATAGTTTCAATTTCAATGAGGCCGCTAACAACAACACCATCAAAGTTGTTCGCAAGGAGTACCTTCTCAACGTGACCGAGCAGCAATTCTCGATCAAGTTCTCTCCCCAGAAGAACTCCGCGGCGTTCATCAATGCAATTGAGGTGGTTTCAGCTCCTGATTATCTCATCTCGGACACGGCTAACAACCTTCAGCCAGTGAGCCAGTTCCAGGGGTTGTCCAAATTTGGATACGAATATATGTACAGGATTAACGTGGGAGGACCTCTAGTGACCCCGGTCAATGACACATTAGGACGGTTCTGGTTGCCGGACGAGCCATTCATTAAGTCCAAGAACATGGCCCAAAGTGCCAAGGTTGAAACCAAAACTATCAAGTATCCTCAAGGGCTCACACCCCAAATAGCTCCACCAATAGTTTATGCAACTGCTGCGCATATGGAAGATGCAGGTGTCAGCAATCAAAAGTTCAATGTGACATGGGACTTTCAGGCTGAAAATGCATATGGTTACTTGATCCGGTTGCATTTCTGCGACATTGTGAGCAAAACACTTGGTAATCTTTACTTCAATGTCTACATCAATGGGCAGATGGCAATAAGTGATTTGGATTTGTCACAAACCGTCAACGGTTTGGCAATTCCATTCTACAAGGACATTGTGGTCAACTCTTCATTGATAAAAGACGTGCTTTCAATCCAGATTGGTCCGTCTAAATTGGGGAGTGGTGCTCAGGATGCCATTCTAAATGGTTTGGAGGTTATGAAAATAAGCAATTCTGTTAATAGTTTGGATGGAGAGTTCGGAGTCGATGGAAAAGAATCAAAAGATAGCAGCGGAGGTGTTCACAAGGGAGCGGTGGCTGCAGTCGGATTTGGTTTGATGTTTGGAGCTTTTATTGGACTTGGGGCAATGGTGTACAAATGGAAGAAGAGACCTCAAGATTGGCAGAAAAGGAACAGCTTCTCTTCTTGGTTACTTCCTGTACATGCTGGAGACAGCAGTTTTATGTCAAGCAAGAACTCAGTGGGAAAGAGCATGTACTCTTCCTCTATGGGCCTTGGCCGATTCTTCTCTCTCGCGGAGTTACAGGAAGCTACCAACAATTTCGACTCGAACAAAATCATTGGTGTTGGTGGATTTGGCAATGTGTATCTTGGCGTGATTGATGATGGGATTAGTGTTGCTGTCAAGAGAGGAAATCCACAATCTGAACAGGGGATTACAGAGTTCCAAACAGAGATTCAAATGTTGTCAAAGCTCAGGCACAGGCATTTGGTCTCTCTAATTGGCTATTGTGATGAAAACCAAGAGATGATCTTGGTTTATGAGTTCATGTCAAATGGACCATTCAGAGATCATCTGTATGGTAAGAACTTGCCACCACTGTCATGGAAGCAAAGACTAGAGATCTGCATTGGTGCTGCTCGCGGGCTTCACTACCTTCATACGGGCACAGCACAAGGCATCATTCACCGCGATGTGAAGACAACAAACATCCTTCTCGATGACCAGTTCACTGCCAAGGTTGCTGATTTCGGGTTGTCTAAAGATGCGCCAATGGGACAGAACCATGTGAGTACAGCAGTGAAGGGAAGCTTTGGGTACTTGGACCCTGAGTACTTTAGGAGGCAGCAACTGACAGACAAATCCGATGTCTACTCATTCGGAGTTGTCATGCTCGAGGCATTGTGCGCTAGGCCTGCTATAAATCCAGCACTTCCAAGAGAGCAAGTCAACTTGGCCGACTGGGGAATGCAGTGGAAGAGGAAAGGCTTGCTGGAAAAGATTGTCGACCCTCTCCTCATTGGAACCATCAACCCTGAATCCATGAAGAAGTTTGGTGAGGCTGCCGAGAAGTGCTTGTTAGAGCACGGTGTGGATAGGCCTACGATGGGAGATGTGCTGTGGAACTTGGAGTATGCTCTGCAGCTTCAAGAGGCATTCACCGAAGGAAAGGGCGAAGATGACAGCATTAATGCTACCCCCTCCGCTGATGCTGCATCTGCCTCTCCTACTGATGCTGCTGCTGCCGCTCCTACTGCCGCTGCTTCCGTTCCTCTCCCGGCTGCTATCCTGGAGGAAGAAGCCCCCCCTACAGAACAGACTATTAATGATCAATCTGGAACTGCTATATTGTCTCAATTTTCTAACCTCAATGGTAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

888

Amino Acids

97.72

Weight (kDa)

5.75

Isoelectric Point (pI)

39.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin PF11721 66 - 211 1.7e-09 Malectin domain
Malectin_like PF12819 67 - 423 1.7e-29 Malectin-like domain
Malectin PF11721 247 - 401 2.4e-09 Malectin domain
Pkinase PF00069 537 - 737 1.3e-41 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 539 - 731 1.2e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 938
AasI GACNNNNNNGTC 1 cut(s) 1160
Acc16I TGCGCA 1 cut(s) 933
Acc36I ACCTGC 1 cut(s) 938
AccBSI CCGCTC 2 cut(s) 1355, 2534
AccI GTMKAC 3 cut(s) 1074, 2157, 2292
AccII CGCG 4 cut(s) 620, 1580, 1929, 1977
AclWI GGATC 1 cut(s) 1009
AcoI YGGCCR 2 cut(s) 1561, 2241
AcsI RAATTY 1 cut(s) 722
AcuI CTGAAG 2 cut(s) 437, 674
AdeI CACNNNGTG 1 cut(s) 2377
AfaI GTAC 9 cut(s) 488, 560, 743, 1418, 1485, 1541, 2080, 2105, 2120
AfiI CCNNNNNNNGG 4 cut(s) 240, 709, 1948, 2393
AjiI CACGTC 1 cut(s) 1186
AjnI CCWGG 4 cut(s) 108, 394, 708, 2574
AjuI GAANNNNNNNTTGG 2 cut(s) 1725, 1757
AloI GAACNNNNNNTCC 2 cut(s) 1283, 1315
AluBI AGCT 8 cut(s) 653, 905, 1391, 1461, 1595, 1759, 2097, 2431
AluI AGCT 8 cut(s) 653, 905, 1391, 1461, 1595, 1759, 2097, 2431
Alw21I GWGCWC 2 cut(s) 1231, 2373
Alw26I GTCTC 4 cut(s) 1426, 1488, 1783, 2643
AlwI GGATC 1 cut(s) 1009
AlwNI CAGNNNCTG 2 cut(s) 656, 2137
Ama87I CYCGRG 1 cut(s) 2180
AoxI GGCC 7 cut(s) 519, 840, 1555, 1561, 2198, 2241, 2384
ApoI RAATTY 1 cut(s) 722
ArsI GACNNNNNNTTYG 2 cut(s) 2139, 2171
AseI ATTAAT 2 cut(s) 2475, 2610
Asp700I GAANNNNTTC 1 cut(s) 1460
AspLEI GCGC 3 cut(s) 934, 2056, 2195
AspS9I GGNCC 7 cut(s) 243, 761, 841, 1205, 1555, 1844, 2110
AsuC2I CCSGG 2 cut(s) 776, 2564
AsuHPI GGTGA 4 cut(s) 169, 1964, 2354, 2437
AvaI CYCGRG 1 cut(s) 2180
AvaII GGWCC 5 cut(s) 243, 761, 1205, 1844, 2110
BaeGI GKGCMC 1 cut(s) 1955
BanII GRGCYC 1 cut(s) 891
BbsI GAAGAC 1 cut(s) 1991
Bbv12I GWGCWC 2 cut(s) 1231, 2373
BceAI ACGGC 1 cut(s) 693
BcgI CGANNNNNNTGC 4 cut(s) 191, 225, 392, 426
BciT130I CCWGG 4 cut(s) 110, 396, 710, 2576
BciVI GTATCC 2 cut(s) 722, 888
BclI TGATCA 1 cut(s) 2614
BcnI CCSGG 2 cut(s) 776, 2564
BcoDI GTCTC 4 cut(s) 1426, 1488, 1783, 2643
BfaI CTAG 3 cut(s) 767, 1904, 2196
BfmI CTRYAG 3 cut(s) 1362, 2426, 2595
BfuAI ACCTGC 1 cut(s) 938
BfuI GTATCC 2 cut(s) 722, 888
BglII AGATCT 1 cut(s) 1908
BmcAI AGTACT 1 cut(s) 2120
Bme1390I CCNGG 6 cut(s) 110, 396, 710, 776, 2564, 2576
Bme18I GGWCC 5 cut(s) 243, 761, 1205, 1844, 2110
BmeT110I CYCGRG 1 cut(s) 2180
BmgBI CACGTC 1 cut(s) 1186
BmgT120I GGNCC 7 cut(s) 243, 761, 841, 1205, 1555, 1844, 2110
BmiI GGNNCC 2 cut(s) 2112, 2311
BmrFI CCNGG 6 cut(s) 110, 396, 710, 776, 2564, 2576
BmrI ACTGGG 1 cut(s) 2257
BmsI GCATC 7 cut(s) 934, 1225, 1974, 2041, 2485, 2509, 2510
BmuI ACTGGG 1 cut(s) 2257
BoxI GACNNNNGTC 1 cut(s) 776
BpiI GAAGAC 1 cut(s) 1991
BplI GAGNNNNNCTC 2 cut(s) 1213, 1245
BpmI CTGGAG 2 cut(s) 1512, 2597
Bpu10I CCTNAGC 2 cut(s) 1230, 1760
BpuEI CTTGAG 2 cut(s) 867, 1422
BpuMI CCSGG 2 cut(s) 776, 2564
BsaBI GATNNNNATC 1 cut(s) 101
BsaI GGTCTC 2 cut(s) 1426, 1783
BsaJI CCNNGG 7 cut(s) 395, 618, 709, 774, 852, 1558, 2022
BsaWI WCCGGW 1 cut(s) 1017
Bsc4I CCNNNNNNNGG 4 cut(s) 240, 709, 1948, 2393
Bse1I ACTGG 4 cut(s) 695, 703, 2011, 2252
Bse3DI GCAATG 2 cut(s) 1416, 1651
Bse8I GATNNNNATC 1 cut(s) 101
BseBI CCWGG 4 cut(s) 110, 396, 710, 2576
BseDI CCNNGG 7 cut(s) 395, 618, 709, 774, 852, 1558, 2022
BseGI GGATG 3 cut(s) 1240, 1297, 1995
BseJI GATNNNNATC 1 cut(s) 101
BseLI CCNNNNNNNGG 4 cut(s) 240, 709, 1948, 2393
BseMI GCAATG 2 cut(s) 1416, 1651
BseMII CTCAG 4 cut(s) 1244, 1536, 1774, 2106
BseNI ACTGG 4 cut(s) 695, 703, 2011, 2252
BseRI GAGGAG 2 cut(s) 321, 2291
BseSI GKGCMC 1 cut(s) 1955
Bsh1236I CGCG 4 cut(s) 620, 1580, 1929, 1977
BshFI GGCC 7 cut(s) 521, 842, 1557, 1563, 2200, 2243, 2386
BsiHKAI GWGCWC 2 cut(s) 1231, 2373
BsiHKCI CYCGRG 1 cut(s) 2180
BsiSI CCGG 4 cut(s) 776, 809, 1018, 2564
BslFI GGGAC 2 cut(s) 995, 2076
BslI CCNNNNNNNGG 4 cut(s) 240, 709, 1948, 2393
BsmAI GTCTC 4 cut(s) 1426, 1488, 1783, 2643
BsmFI GGGAC 2 cut(s) 995, 2076
BsmI GAATGC 2 cut(s) 2259, 2441
BsnI GGCC 7 cut(s) 521, 842, 1557, 1563, 2200, 2243, 2386
Bso31I GGTCTC 2 cut(s) 1426, 1783
BsoBI CYCGRG 1 cut(s) 2180
Bsp1286I GDGCHC 4 cut(s) 891, 1231, 1955, 2373
Bsp1407I TGTACA 3 cut(s) 741, 1416, 1483
Bsp143I GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2614
BspANI GGCC 7 cut(s) 521, 842, 1557, 1563, 2200, 2243, 2386
BspCNI CTCAG 4 cut(s) 1243, 1535, 1773, 2107
BspFNI CGCG 4 cut(s) 620, 1580, 1929, 1977
BspHI TCATGA 1 cut(s) 474
BspLI GGNNCC 2 cut(s) 2112, 2311
BspMAI CTGCAG 2 cut(s) 1366, 2430
BspMI ACCTGC 1 cut(s) 938
BspPI GGATC 1 cut(s) 1009
BspTNI GGTCTC 2 cut(s) 1426, 1783
BsrBI CCGCTC 2 cut(s) 1355, 2534
BsrDI GCAATG 2 cut(s) 1416, 1651
BsrGI TGTACA 3 cut(s) 741, 1416, 1483
BsrI ACTGG 4 cut(s) 695, 703, 2011, 2252
BssECI CCNNGG 7 cut(s) 395, 618, 709, 774, 852, 1558, 2022
BssMI GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2614
BssT1I CCWWGG 3 cut(s) 852, 1558, 2022
Bst2UI CCWGG 4 cut(s) 110, 396, 710, 2576
Bst4CI ACNGT 5 cut(s) 798, 1123, 1130, 1887, 2375
Bst6I CTCTTC 5 cut(s) 1174, 1424, 1471, 1549, 2258
BstAPI GCANNNNNTGC 1 cut(s) 929
BstAUI TGTACA 3 cut(s) 741, 1416, 1483
BstC8I GCNNGC 4 cut(s) 1927, 1931, 2202, 2276
BstDEI CTNAG 4 cut(s) 1230, 1522, 1760, 2115
BstDSI CCRYGG 1 cut(s) 618
BstF5I GGATG 3 cut(s) 1240, 1297, 1995
BstFNI CGCG 4 cut(s) 620, 1580, 1929, 1977
BstHHI GCGC 3 cut(s) 934, 2056, 2195
BstKTI GATC 7 cut(s) 451, 594, 1017, 1818, 1858, 1911, 2617
BstMAI GTCTC 4 cut(s) 1426, 1488, 1783, 2643
BstMBI GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2614
BstNI CCWGG 4 cut(s) 110, 396, 710, 2576
BstNSI RCATGY 2 cut(s) 1490, 1540
BstPAI GACNNNNGTC 1 cut(s) 776
BstSCI CCNGG 6 cut(s) 108, 394, 708, 774, 2562, 2574
BstSFI CTRYAG 3 cut(s) 1362, 2426, 2595
BstSLI GKGCMC 1 cut(s) 1955
BstUI CGCG 4 cut(s) 620, 1580, 1929, 1977
BstV2I GAAGAC 1 cut(s) 1991
BstX2I RGATCY 1 cut(s) 1908
BstXI CCANNNNNNTGG 2 cut(s) 838, 1890
BstYI RGATCY 1 cut(s) 1908
BsuI GTATCC 2 cut(s) 722, 888
BsuRI GGCC 7 cut(s) 521, 842, 1557, 1563, 2200, 2243, 2386
BtgI CCRYGG 1 cut(s) 618
BtgZI GCGATG 2 cut(s) 252, 1992
BtrI CACGTC 1 cut(s) 1186
BtsCI GGATG 3 cut(s) 1240, 1297, 1995
BtsI GCAGTG 3 cut(s) 2016, 2091, 2264
BtsIMutI CAGTG 6 cut(s) 702, 1530, 1883, 2016, 2091, 2264
BveI ACCTGC 1 cut(s) 938
Cac8I GCNNGC 4 cut(s) 1927, 1931, 2202, 2276
CaiI CAGNNNCTG 2 cut(s) 656, 2137
CciI TCATGA 1 cut(s) 474
CfoI GCGC 3 cut(s) 934, 2056, 2195
Cfr13I GGNCC 7 cut(s) 243, 761, 841, 1205, 1555, 1844, 2110
Cfr42I CCGCGG 1 cut(s) 621
Csp6I GTAC 9 cut(s) 487, 559, 742, 1417, 1484, 1540, 2079, 2104, 2119
CspCI CAANNNNNGTGG 2 cut(s) 624, 659
CviQI GTAC 9 cut(s) 487, 559, 742, 1417, 1484, 1540, 2079, 2104, 2119
DdeI CTNAG 4 cut(s) 1230, 1522, 1760, 2115
DpnI GATC 7 cut(s) 450, 593, 1016, 1817, 1857, 1910, 2616
DpnII GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2614
DraIII CACNNNGTG 1 cut(s) 2377
DrdI GACNNNNNNGTC 1 cut(s) 1160
DseDI GACNNNNNNGTC 1 cut(s) 1160
EaeI YGGCCR 2 cut(s) 1561, 2241
Eam1104I CTCTTC 5 cut(s) 1174, 1424, 1471, 1549, 2258
EarI CTCTTC 5 cut(s) 1174, 1424, 1471, 1549, 2258
Eco130I CCWWGG 3 cut(s) 852, 1558, 2022
Eco147I AGGCCT 2 cut(s) 2200, 2386
Eco24I GRGCYC 1 cut(s) 891
Eco31I GGTCTC 2 cut(s) 1426, 1783
Eco47I GGWCC 5 cut(s) 243, 761, 1205, 1844, 2110
Eco57I CTGAAG 2 cut(s) 437, 674
Eco88I CYCGRG 1 cut(s) 2180
EcoO109I RGGNCCY 2 cut(s) 243, 761
EcoRII CCWGG 4 cut(s) 108, 394, 708, 2574
EcoT14I CCWWGG 3 cut(s) 852, 1558, 2022
EcoT22I ATGCAT 1 cut(s) 1003
EcoT38I GRGCYC 1 cut(s) 891
ErhI CCWWGG 3 cut(s) 852, 1558, 2022
FalI AAGNNNNNCTT 4 cut(s) 1173, 1205, 2081, 2113
FaqI GGGAC 2 cut(s) 995, 2076
FauI CCCGC 1 cut(s) 1922
FauNDI CATATG 2 cut(s) 936, 1003
FbaI TGATCA 1 cut(s) 2614
FblI GTMKAC 3 cut(s) 1074, 2157, 2292
FokI GGATG 3 cut(s) 1247, 1304, 1982
FriOI GRGCYC 1 cut(s) 891
FspBI CTAG 3 cut(s) 767, 1904, 2196
FspI TGCGCA 1 cut(s) 933
GlaI GCGC 3 cut(s) 933, 2055, 2194
GsuI CTGGAG 2 cut(s) 1512, 2597
HaeIII GGCC 7 cut(s) 521, 842, 1557, 1563, 2200, 2243, 2386
HapII CCGG 4 cut(s) 776, 809, 1018, 2564
HhaI GCGC 3 cut(s) 934, 2056, 2195
Hin6I GCGC 3 cut(s) 932, 2054, 2193
HinP1I GCGC 3 cut(s) 932, 2054, 2193
HincII GTYRAC 4 cut(s) 1126, 1165, 2236, 2293
HindII GTYRAC 4 cut(s) 1126, 1165, 2236, 2293
HindIII AAGCTT 1 cut(s) 2095
HinfI GANTC 7 cut(s) 257, 1305, 1319, 1566, 1610, 1741, 2324
HpaII CCGG 4 cut(s) 776, 809, 1018, 2564
HphI GGTGA 4 cut(s) 169, 1964, 2354, 2437
Hpy99I CGWCG 1 cut(s) 88
HpyCH4III ACNGT 5 cut(s) 798, 1123, 1130, 1887, 2375
HpyCH4IV ACGT 5 cut(s) 83, 377, 570, 753, 1185
HpyF3I CTNAG 4 cut(s) 1230, 1522, 1760, 2115
HpySE526I ACGT 5 cut(s) 83, 377, 570, 753, 1185
HspAI GCGC 3 cut(s) 932, 2054, 2193
Ksp22I TGATCA 1 cut(s) 2614
KspI CCGCGG 1 cut(s) 621
Kzo9I GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2614
LmnI GCTCC 7 cut(s) 226, 501, 658, 910, 1352, 1388, 2539
LweI GCATC 7 cut(s) 934, 1225, 1974, 2041, 2485, 2509, 2510
MaeI CTAG 3 cut(s) 767, 1904, 2196
MaeII ACGT 5 cut(s) 83, 377, 570, 753, 1185
MaeIII GTNAC 7 cut(s) 571, 769, 973, 1007, 1113, 1473, 1584
MalI GATC 7 cut(s) 450, 593, 1016, 1817, 1857, 1910, 2616
MbiI CCGCTC 2 cut(s) 1355, 2534
MboI GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2614
MfeI CAATTG 1 cut(s) 636
MflI RGATCY 1 cut(s) 1908
MhlI GDGCHC 4 cut(s) 891, 1231, 1955, 2373
MlyI GAGTC 2 cut(s) 1314, 1604
MmeI TCCRAC 1 cut(s) 1348
Mph1103I ATGCAT 1 cut(s) 1003
MroXI GAANNNNTTC 1 cut(s) 1460
MseI TTAA 6 cut(s) 80, 750, 825, 1281, 2475, 2610
MslI CAYNNNNRTG 3 cut(s) 1863, 1888, 1977
MspA1I CMGCKG 4 cut(s) 620, 1335, 2492, 2546
MspI CCGG 4 cut(s) 776, 809, 1018, 2564
MspR9I CCNGG 6 cut(s) 110, 396, 710, 776, 2564, 2576
MunI CAATTG 1 cut(s) 636
Mva1269I GAATGC 2 cut(s) 2259, 2441
MvaI CCWGG 4 cut(s) 110, 396, 710, 2576
MvnI CGCG 4 cut(s) 620, 1580, 1929, 1977
NciI CCSGG 2 cut(s) 776, 2564
NdeI CATATG 2 cut(s) 936, 1003
NdeII GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2614
NlaIV GGNNCC 2 cut(s) 2112, 2311
NmeAIII GCCGAG 1 cut(s) 2377
NmuCI GTSAC 4 cut(s) 571, 769, 973, 1113
NsbI TGCGCA 1 cut(s) 933
NsiI ATGCAT 1 cut(s) 1003
NspI RCATGY 2 cut(s) 1490, 1540
PaeR7I CTCGAG 1 cut(s) 2180
PagI TCATGA 1 cut(s) 474
PaqCI CACCTGC 1 cut(s) 938
PceI AGGCCT 2 cut(s) 2200, 2386
PctI GAATGC 2 cut(s) 2259, 2441
PdmI GAANNNNTTC 1 cut(s) 1460
PfeI GAWTC 5 cut(s) 257, 1319, 1566, 1741, 2324
PfoI TCCNGGA 1 cut(s) 2574
PleI GAGTC 2 cut(s) 1313, 1604
PpsI GAGTC 2 cut(s) 1313, 1604
PpuMI RGGWCCY 2 cut(s) 243, 761
PshAI GACNNNNGTC 1 cut(s) 776
PshBI ATTAAT 2 cut(s) 2475, 2610
Psp5II RGGWCCY 2 cut(s) 243, 761
Psp6I CCWGG 4 cut(s) 108, 394, 708, 2574
PspGI CCWGG 4 cut(s) 108, 394, 708, 2574
PspN4I GGNNCC 2 cut(s) 2112, 2311
PspPI GGNCC 7 cut(s) 243, 761, 841, 1205, 1555, 1844, 2110
PspPPI RGGWCCY 2 cut(s) 243, 761
PspXI VCTCGAGB 1 cut(s) 2180
PstI CTGCAG 2 cut(s) 1366, 2430
PstNI CAGNNNCTG 2 cut(s) 656, 2137
PsuI RGATCY 1 cut(s) 1908
RsaI GTAC 9 cut(s) 488, 560, 743, 1418, 1485, 1541, 2080, 2105, 2120
RsaNI GTAC 9 cut(s) 487, 559, 742, 1417, 1484, 1540, 2079, 2104, 2119
RseI CAYNNNNRTG 3 cut(s) 1863, 1888, 1977
SacII CCGCGG 1 cut(s) 621
SalI GTCGAC 1 cut(s) 2291
SaqAI TTAA 6 cut(s) 80, 750, 825, 1281, 2475, 2610
Sau3AI GATC 7 cut(s) 448, 591, 1014, 1815, 1855, 1908, 2614
Sau96I GGNCC 7 cut(s) 243, 761, 841, 1205, 1555, 1844, 2110
ScaI AGTACT 1 cut(s) 2120
SchI GAGTC 2 cut(s) 1314, 1604
ScrFI CCNGG 6 cut(s) 110, 396, 710, 776, 2564, 2576
SduI GDGCHC 4 cut(s) 891, 1231, 1955, 2373
SfaNI GCATC 7 cut(s) 934, 1225, 1974, 2041, 2485, 2509, 2510
SfcI CTRYAG 3 cut(s) 1362, 2426, 2595
Sfr274I CTCGAG 1 cut(s) 2180
Sfr303I CCGCGG 1 cut(s) 621
SgrBI CCGCGG 1 cut(s) 621
SinI GGWCC 5 cut(s) 243, 761, 1205, 1844, 2110
SlaI CTCGAG 1 cut(s) 2180
SmiMI CAYNNNNRTG 3 cut(s) 1863, 1888, 1977
SmlI CTYRAG 3 cut(s) 882, 1437, 2180
SmoI CTYRAG 3 cut(s) 882, 1437, 2180
SseBI AGGCCT 2 cut(s) 2200, 2386
SspMI CTAG 3 cut(s) 767, 1904, 2196
StuI AGGCCT 2 cut(s) 2200, 2386
StyD4I CCNGG 6 cut(s) 108, 394, 708, 774, 2562, 2574
StyI CCWWGG 3 cut(s) 852, 1558, 2022
TaaI ACNGT 5 cut(s) 798, 1123, 1130, 1887, 2375
TaiI ACGT 5 cut(s) 86, 380, 573, 756, 1188
TaqI TCGA 9 cut(s) 86, 201, 590, 1308, 1608, 1613, 2004, 2181, 2292
TaqII GACCGA 1 cut(s) 590
TatI WGTACW 7 cut(s) 486, 741, 1416, 1483, 1539, 2078, 2118
TauI GCSGC 4 cut(s) 524, 623, 2534, 2546
TfiI GAWTC 5 cut(s) 257, 1319, 1566, 1741, 2324
Tru1I TTAA 6 cut(s) 80, 750, 825, 1281, 2475, 2610
Tru9I TTAA 6 cut(s) 80, 750, 825, 1281, 2475, 2610
TscAI CASTG 6 cut(s) 702, 1530, 1890, 2023, 2091, 2264
TseFI GTSAC 4 cut(s) 571, 769, 973, 1113
Tsp45I GTSAC 4 cut(s) 571, 769, 973, 1113
TspDTI ATGAA 8 cut(s) 616, 811, 1161, 1277, 1815, 1822, 1934, 2345
TspGWI ACGGA 2 cut(s) 1197, 2542
TspRI CASTG 6 cut(s) 702, 1530, 1890, 2023, 2091, 2264
VpaK11BI GGWCC 5 cut(s) 243, 761, 1205, 1844, 2110
VspI ATTAAT 2 cut(s) 2475, 2610
XapI RAATTY 1 cut(s) 722
XceI RCATGY 2 cut(s) 1490, 1540
XcmI CCANNNNNNNNNTGG 1 cut(s) 1887
XhoI CTCGAG 1 cut(s) 2180
XmiI GTMKAC 3 cut(s) 1074, 2157, 2292
XmnI GAANNNNTTC 1 cut(s) 1460
XspI CTAG 3 cut(s) 767, 1904, 2196
ZrmI AGTACT 1 cut(s) 2120
Zsp2I ATGCAT 1 cut(s) 1003
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.