Rorug07G0138800

Isoflavone reductase homolog

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
10934352 .. 10935178
827 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0138800.1

Sequence Viewer

Length: 336 bp
ATGGGAAACTGCATGGAGACATGCGCACAGAAGCAGCAAGAAGAGGATCAAATGCAGCAGATGCAGAAGCAGAAAGGAGATGAGATTAGGTTTGGGAAGGAAGGCATTAATTCGGGGGAAGATGGAAAATTGAGGGTAAAGATTGTGCTGACAAAAGAAGAGCTACAGATGTTGATGCTTCAGCTGCAAGACAAAGGAGGGAAGAAGAGCTTAGAAGAAGTTCTGGAGGAGATCCAGAAAGGCAGAGGTAAGTTAGTACTAGTTGAAGAAGCTTGGAAGCCTTCTTTGGACAGTATCATGGAATGCCCTGAACTATTTGAAGATATGGATAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

111

Amino Acids

12.79

Weight (kDa)

4.74

Isoelectric Point (pI)

54.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 25
AclWI GGATC 2 cut(s) 54, 226
AcuI CTGAAG 1 cut(s) 164
AfaI GTAC 1 cut(s) 258
AgsI TTSAA 2 cut(s) 266, 320
AhlI ACTAGT 1 cut(s) 259
AjuI GAANNNNNNNTTGG 2 cut(s) 269, 301
AluBI AGCT 4 cut(s) 163, 184, 210, 272
AluI AGCT 4 cut(s) 163, 184, 210, 272
Alw26I GTCTC 1 cut(s) 11
AlwI GGATC 2 cut(s) 54, 226
ApeKI GCWGC 3 cut(s) 34, 55, 184
AseI ATTAAT 1 cut(s) 108
Asp700I GAANNNNTTC 1 cut(s) 219
AspLEI GCGC 1 cut(s) 26
BbvI GCAGC 3 cut(s) 46, 67, 171
BccI CCATC 1 cut(s) 116
BcoDI GTCTC 1 cut(s) 11
BcuI ACTAGT 1 cut(s) 259
BfaI CTAG 1 cut(s) 260
BfmI CTRYAG 1 cut(s) 164
BisI GCNGC 3 cut(s) 35, 56, 185
BlsI GCNGC 3 cut(s) 36, 57, 186
BmcAI AGTACT 1 cut(s) 258
BmsI GCATC 2 cut(s) 51, 165
BpmI CTGGAG 1 cut(s) 245
BseRI GAGGAG 1 cut(s) 242
BseXI GCAGC 3 cut(s) 46, 67, 171
BsmAI GTCTC 1 cut(s) 11
BsmI GAATGC 1 cut(s) 308
Bsp143I GATC 2 cut(s) 46, 231
BspPI GGATC 2 cut(s) 54, 226
BspQI GCTCTTC 2 cut(s) 153, 200
BssMI GATC 2 cut(s) 46, 231
Bst4CI ACNGT 1 cut(s) 293
Bst6I CTCTTC 3 cut(s) 36, 153, 200
BstAPI GCANNNNNTGC 1 cut(s) 61
BstDEI CTNAG 1 cut(s) 211
BstHHI GCGC 1 cut(s) 26
BstKTI GATC 2 cut(s) 49, 234
BstMAI GTCTC 1 cut(s) 11
BstMBI GATC 2 cut(s) 46, 231
BstMWI GCNNNNNNNGC 2 cut(s) 61, 184
BstNSI RCATGY 1 cut(s) 24
BstSFI CTRYAG 1 cut(s) 164
BstV1I GCAGC 3 cut(s) 46, 67, 171
BstX2I RGATCY 1 cut(s) 231
BstYI RGATCY 1 cut(s) 231
CfoI GCGC 1 cut(s) 26
Csp6I GTAC 1 cut(s) 257
CviAII CATG 3 cut(s) 13, 21, 298
CviJI RGCY 5 cut(s) 163, 184, 210, 272, 280
CviKI_1 RGCY 5 cut(s) 163, 184, 210, 272, 280
CviQI GTAC 1 cut(s) 257
DdeI CTNAG 1 cut(s) 211
DpnI GATC 2 cut(s) 48, 233
DpnII GATC 2 cut(s) 46, 231
Eam1104I CTCTTC 3 cut(s) 36, 153, 200
EarI CTCTTC 3 cut(s) 36, 153, 200
Eco57I CTGAAG 1 cut(s) 164
FaeI CATG 3 cut(s) 16, 24, 301
FaiI YATR 4 cut(s) 14, 22, 299, 326
FalI AAGNNNNNCTT 2 cut(s) 194, 226
FatI CATG 3 cut(s) 12, 20, 297
Fnu4HI GCNGC 3 cut(s) 35, 56, 185
Fsp4HI GCNGC 3 cut(s) 35, 56, 185
FspAI RTGCGCAY 1 cut(s) 25
FspBI CTAG 1 cut(s) 260
FspI TGCGCA 1 cut(s) 25
GlaI GCGC 1 cut(s) 25
GluI GCNGC 3 cut(s) 35, 56, 185
GsuI CTGGAG 1 cut(s) 245
HhaI GCGC 1 cut(s) 26
Hin1II CATG 3 cut(s) 16, 24, 301
Hin6I GCGC 1 cut(s) 24
HinP1I GCGC 1 cut(s) 24
HindIII AAGCTT 1 cut(s) 270
Hpy188III TCNNGA 2 cut(s) 224, 235
HpyAV CCTTC 3 cut(s) 91, 95, 291
HpyCH4III ACNGT 1 cut(s) 293
HpyCH4V TGCA 4 cut(s) 12, 55, 64, 187
HpyF10VI GCNNNNNNNGC 2 cut(s) 61, 184
HpyF3I CTNAG 1 cut(s) 211
Hsp92II CATG 3 cut(s) 16, 24, 301
HspAI GCGC 1 cut(s) 24
Kzo9I GATC 2 cut(s) 46, 231
LguI GCTCTTC 2 cut(s) 153, 200
LpnPI CCDG 3 cut(s) 209, 248, 321
Lsp1109I GCAGC 3 cut(s) 46, 67, 171
LweI GCATC 2 cut(s) 51, 165
MaeI CTAG 1 cut(s) 260
MalI GATC 2 cut(s) 48, 233
MboI GATC 2 cut(s) 46, 231
MboII GAAGA 8 cut(s) 53, 131, 170, 214, 217, 227, 278, 332
MflI RGATCY 1 cut(s) 231
MluCI AATT 2 cut(s) 109, 128
MnlI CCTC 5 cut(s) 37, 126, 191, 220, 239
MroXI GAANNNNTTC 1 cut(s) 219
MseI TTAA 1 cut(s) 108
MspA1I CMGCKG 1 cut(s) 184
Mva1269I GAATGC 1 cut(s) 308
MwoI GCNNNNNNNGC 2 cut(s) 61, 184
NdeII GATC 2 cut(s) 46, 231
NlaIII CATG 3 cut(s) 16, 24, 301
NsbI TGCGCA 1 cut(s) 25
NspI RCATGY 1 cut(s) 24
PciSI GCTCTTC 2 cut(s) 153, 200
PctI GAATGC 1 cut(s) 308
PdmI GAANNNNTTC 1 cut(s) 219
PkrI GCNGC 3 cut(s) 36, 57, 186
PshBI ATTAAT 1 cut(s) 108
PsuI RGATCY 1 cut(s) 231
PvuII CAGCTG 1 cut(s) 184
RsaI GTAC 1 cut(s) 258
RsaNI GTAC 1 cut(s) 257
SapI GCTCTTC 2 cut(s) 153, 200
SaqAI TTAA 1 cut(s) 108
SatI GCNGC 3 cut(s) 35, 56, 185
Sau3AI GATC 2 cut(s) 46, 231
ScaI AGTACT 1 cut(s) 258
SetI ASST 6 cut(s) 92, 165, 186, 212, 250, 274
SfaNI GCATC 2 cut(s) 51, 165
SfcI CTRYAG 1 cut(s) 164
SpeI ACTAGT 1 cut(s) 259
Sse9I AATT 2 cut(s) 109, 128
SspMI CTAG 1 cut(s) 260
TaaI ACNGT 1 cut(s) 293
TasI AATT 2 cut(s) 109, 128
TatI WGTACW 1 cut(s) 256
Tru1I TTAA 1 cut(s) 108
Tru9I TTAA 1 cut(s) 108
TseI GCWGC 3 cut(s) 34, 55, 184
VspI ATTAAT 1 cut(s) 108
XceI RCATGY 1 cut(s) 24
XmnI GAANNNNTTC 1 cut(s) 219
XspI CTAG 1 cut(s) 260
ZrmI AGTACT 1 cut(s) 258
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.