Rh7BG265500

Isoflavone reductase homolog

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
24279940 .. 24281681
1742 bp
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UTR
Exon/CDS
Intron
Rh7BG265500.1

Sequence Viewer

Length: 546 bp
ATGCCAAATGCAAAGAGCAACCTTAAGGTTCTTGCAGTAGGTGGTGCTGGGTATATTGGGAGAAGGATTTTTAATGCAAGCCTAGCACAAGGCTACCCGACTTATGTCATTCAAAGGTCGGCAATAGAGATTGGCCTCGATATTGAGAAACTACAAATGCTTTTGTGCTTTAAGAAGCAGGGGGCTCATCTCGTGGAGGGTACATTTTCTGTTGTCCAAAGCCTTGTTGATGCCGTCAAACAAGTTGACGTTCTCAAGCTTGTTGAAGACATTAAACAAGCTGGAAATGTTAAGTTTAACAATGCTGGCTTCGCCGGTTATTTTGTGGGCAACCTCTCTCAGATGGGAATACTTGTTCCTCCGAAGGACAAAGTCCTTATTTACGGAGATGGCAACACTAAAGTATCTTTCATGAACGAAGATGACATCAGAAGCTATACAATCAAGACAATAGATGATCTGCGAACTTTGAACAAAACATTGTATCTTCTTCCGCCCGAAAACCTACTCACTCAAAGACAACTGAGAGGTCAAAAGAGTAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

181

Amino Acids

19.99

Weight (kDa)

9.47

Isoelectric Point (pI)

34.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NmrA PF05368 9 - 85 8.7e-09 NmrA-like family
NmrA PF05368 104 - 175 1.9e-06 NmrA-like family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 494
AfaI GTAC 1 cut(s) 202
AflII CTTAAG 1 cut(s) 23
AgsI TTSAA 3 cut(s) 113, 266, 472
AloI GAACNNNNNNTCC 2 cut(s) 339, 371
AluBI AGCT 3 cut(s) 259, 281, 435
AluI AGCT 3 cut(s) 259, 281, 435
AoxI GGCC 1 cut(s) 133
BaeI ACNNNNGTAYC 2 cut(s) 387, 420
BanII GRGCYC 1 cut(s) 187
BauI CACGAG 1 cut(s) 191
BbsI GAAGAC 1 cut(s) 273
BccI CCATC 2 cut(s) 337, 383
BceAI ACGGC 1 cut(s) 218
BfaI CTAG 1 cut(s) 83
BfrI CTTAAG 1 cut(s) 23
BmsI GCATC 1 cut(s) 220
BoxI GACNNNNGTC 1 cut(s) 104
BpiI GAAGAC 1 cut(s) 273
BpuEI CTTGAG 1 cut(s) 239
Bse118I RCCGGY 1 cut(s) 314
BseMII CTCAG 2 cut(s) 353, 515
BseYI CCCAGC 1 cut(s) 47
BshFI GGCC 1 cut(s) 135
BsiSI CCGG 1 cut(s) 315
BsnI GGCC 1 cut(s) 135
Bsp1286I GDGCHC 1 cut(s) 187
Bsp143I GATC 1 cut(s) 457
BspACI CCGC 1 cut(s) 494
BspANI GGCC 1 cut(s) 135
BspCNI CTCAG 2 cut(s) 352, 516
BspHI TCATGA 1 cut(s) 411
BspTI CTTAAG 1 cut(s) 23
BsrFI RCCGGY 1 cut(s) 314
BssAI RCCGGY 1 cut(s) 314
BssMI GATC 1 cut(s) 457
BssSI CACGAG 1 cut(s) 191
Bst2BI CACGAG 1 cut(s) 191
BstAFI CTTAAG 1 cut(s) 23
BstC8I GCNNGC 2 cut(s) 79, 307
BstDEI CTNAG 2 cut(s) 339, 524
BstKTI GATC 1 cut(s) 460
BstMBI GATC 1 cut(s) 457
BstMWI GCNNNNNNNGC 2 cut(s) 83, 311
BstPAI GACNNNNGTC 1 cut(s) 104
BstV2I GAAGAC 1 cut(s) 273
BsuRI GGCC 1 cut(s) 135
Cac8I GCNNGC 2 cut(s) 79, 307
CciI TCATGA 1 cut(s) 411
Cfr10I RCCGGY 1 cut(s) 314
Csp6I GTAC 1 cut(s) 201
CviAII CATG 1 cut(s) 412
CviJI RGCY 9 cut(s) 81, 93, 135, 185, 222, 259, 281, 309, 435
CviKI_1 RGCY 9 cut(s) 81, 93, 135, 185, 222, 259, 281, 309, 435
CviQI GTAC 1 cut(s) 201
DdeI CTNAG 2 cut(s) 339, 524
DpnI GATC 1 cut(s) 459
DpnII GATC 1 cut(s) 457
EciI GGCGGA 1 cut(s) 483
Eco24I GRGCYC 1 cut(s) 187
EcoT38I GRGCYC 1 cut(s) 187
FaeI CATG 1 cut(s) 415
FaiI YATR 4 cut(s) 54, 105, 413, 438
FatI CATG 1 cut(s) 411
FriOI GRGCYC 1 cut(s) 187
FspBI CTAG 1 cut(s) 83
GsaI CCCAGC 1 cut(s) 51
HaeIII GGCC 1 cut(s) 135
HapII CCGG 1 cut(s) 315
Hin1II CATG 1 cut(s) 415
HincII GTYRAC 1 cut(s) 247
HindII GTYRAC 1 cut(s) 247
HindIII AAGCTT 1 cut(s) 257
HpaII CCGG 1 cut(s) 315
Hpy166II GTNNAC 1 cut(s) 247
Hpy188I TCNGA 3 cut(s) 342, 363, 431
Hpy188III TCNNGA 2 cut(s) 412, 445
Hpy8I GTNNAC 1 cut(s) 247
HpyAV CCTTC 2 cut(s) 57, 358
HpyCH4IV ACGT 1 cut(s) 249
HpyCH4V TGCA 3 cut(s) 11, 35, 77
HpyF10VI GCNNNNNNNGC 2 cut(s) 83, 311
HpyF3I CTNAG 2 cut(s) 339, 524
HpySE526I ACGT 1 cut(s) 249
Hsp92II CATG 1 cut(s) 415
Kzo9I GATC 1 cut(s) 457
LpnPI CCDG 5 cut(s) 33, 164, 267, 291, 328
LweI GCATC 1 cut(s) 220
MaeI CTAG 1 cut(s) 83
MaeII ACGT 1 cut(s) 249
MalI GATC 1 cut(s) 459
MboI GATC 1 cut(s) 457
MboII GAAGA 4 cut(s) 278, 431, 479, 482
MhlI GDGCHC 1 cut(s) 187
MnlI CCTC 5 cut(s) 146, 190, 344, 369, 521
MseI TTAA 6 cut(s) 24, 72, 171, 273, 291, 297
MspCI CTTAAG 1 cut(s) 23
MspI CCGG 1 cut(s) 315
MwoI GCNNNNNNNGC 2 cut(s) 83, 311
NdeII GATC 1 cut(s) 457
NlaIII CATG 1 cut(s) 415
PagI TCATGA 1 cut(s) 411
PflFI GACNNNGTC 1 cut(s) 371
PshAI GACNNNNGTC 1 cut(s) 104
PspFI CCCAGC 1 cut(s) 47
PsyI GACNNNGTC 1 cut(s) 371
RsaI GTAC 1 cut(s) 202
RsaNI GTAC 1 cut(s) 201
SaqAI TTAA 6 cut(s) 24, 72, 171, 273, 291, 297
Sau3AI GATC 1 cut(s) 457
SduI GDGCHC 1 cut(s) 187
SfaNI GCATC 1 cut(s) 220
SmlI CTYRAG 2 cut(s) 23, 254
SmoI CTYRAG 2 cut(s) 23, 254
SsiI CCGC 1 cut(s) 494
SspMI CTAG 1 cut(s) 83
TaiI ACGT 1 cut(s) 252
TaqI TCGA 1 cut(s) 138
Tru1I TTAA 6 cut(s) 24, 72, 171, 273, 291, 297
Tru9I TTAA 6 cut(s) 24, 72, 171, 273, 291, 297
TspDTI ATGAA 2 cut(s) 400, 428
TspGWI ACGGA 1 cut(s) 399
Tth111I GACNNNGTC 1 cut(s) 371
Vha464I CTTAAG 1 cut(s) 23
XspI CTAG 1 cut(s) 83
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.