Regulator of Vps4 activity in the MVB pathway
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom04g17910 pycom07g08170 |
| rosa_chinensis | RchiOBHm_Chr2g0164361 RchiOBHm_Chr5g0025851 RchiOBHm_Chr7g0188301 |
| rosa_laevigata | RLG00000008807 RLG00000012371 RLG00000012376 RLG00000023114 RLG00000026781 |
| rosa_multiflora | Rmu_sc0000650.1_g000022 Rmu_sc0003936.1_g000028 |
| rosa_roxburghii | Rroxscaffold_2G00127760 Rroxscaffold_2G00128620 Rroxscaffold_5G00371280 Rroxscaffold_5G00372980 Rroxscaffold_7G00180250 |
| rosa_rugosa | Rorug02G0200000 Rorug02G0200100 Rorug03G0054500 Rorug04G0056600 Rorug06G0006900 Rorug06G0062200 |
| rosa_samantha | Rh1AG047100 Rh1BG199800 Rh1BG210600 Rh1CG223100 Rh1DG227600 Rh2BG283100 Rh3DG073700 Rh5AG386600 Rh5AG529200 Rh5DG179300 Rh6DG124400 Rh7AG502700 Rh7BG306100 Rh7BG375400 Rh7BG474000 Rh7DG359700 |
| rosa_wichuraiana | Rw1G007110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 441 |
| AcuI | CTGAAG | 3 cut(s) | 21, 221, 230 |
| AfaI | GTAC | 1 cut(s) | 330 |
| AgsI | TTSAA | 5 cut(s) | 131, 282, 310, 326, 432 |
| AluBI | AGCT | 3 cut(s) | 41, 316, 322 |
| AluI | AGCT | 3 cut(s) | 41, 316, 322 |
| Alw26I | GTCTC | 1 cut(s) | 359 |
| AoxI | GGCC | 2 cut(s) | 119, 241 |
| ApeKI | GCWGC | 1 cut(s) | 313 |
| AseI | ATTAAT | 1 cut(s) | 252 |
| AsuHPI | GGTGA | 1 cut(s) | 172 |
| BbvI | GCAGC | 1 cut(s) | 325 |
| BccI | CCATC | 1 cut(s) | 38 |
| BceAI | ACGGC | 1 cut(s) | 106 |
| BcoDI | GTCTC | 1 cut(s) | 359 |
| BfaI | CTAG | 1 cut(s) | 167 |
| BisI | GCNGC | 1 cut(s) | 314 |
| BlsI | GCNGC | 1 cut(s) | 315 |
| BpmI | CTGGAG | 1 cut(s) | 302 |
| BpuEI | CTTGAG | 1 cut(s) | 218 |
| BseGI | GGATG | 1 cut(s) | 295 |
| BseXI | GCAGC | 1 cut(s) | 325 |
| BshFI | GGCC | 2 cut(s) | 121, 243 |
| BslFI | GGGAC | 3 cut(s) | 109, 184, 280 |
| BsmAI | GTCTC | 1 cut(s) | 359 |
| BsmBI | CGTCTC | 1 cut(s) | 359 |
| BsmFI | GGGAC | 3 cut(s) | 109, 184, 280 |
| BsnI | GGCC | 2 cut(s) | 121, 243 |
| BspACI | CCGC | 1 cut(s) | 441 |
| BspANI | GGCC | 2 cut(s) | 121, 243 |
| Bst6I | CTCTTC | 3 cut(s) | 110, 179, 375 |
| BstF5I | GGATG | 1 cut(s) | 295 |
| BstMAI | GTCTC | 1 cut(s) | 359 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 319 |
| BstV1I | GCAGC | 1 cut(s) | 325 |
| BsuRI | GGCC | 2 cut(s) | 121, 243 |
| BtgZI | GCGATG | 1 cut(s) | 16 |
| BtsCI | GGATG | 1 cut(s) | 295 |
| Csp6I | GTAC | 1 cut(s) | 329 |
| CviJI | RGCY | 7 cut(s) | 41, 121, 166, 243, 316, 322, 436 |
| CviKI_1 | RGCY | 7 cut(s) | 41, 121, 166, 243, 316, 322, 436 |
| CviQI | GTAC | 1 cut(s) | 329 |
| Eam1104I | CTCTTC | 3 cut(s) | 110, 179, 375 |
| EarI | CTCTTC | 3 cut(s) | 110, 179, 375 |
| EciI | GGCGGA | 1 cut(s) | 430 |
| Eco57I | CTGAAG | 3 cut(s) | 21, 221, 230 |
| Esp3I | CGTCTC | 1 cut(s) | 359 |
| FaiI | YATR | 5 cut(s) | 146, 155, 259, 261, 456 |
| FaqI | GGGAC | 3 cut(s) | 109, 184, 280 |
| Fnu4HI | GCNGC | 1 cut(s) | 314 |
| FokI | GGATG | 1 cut(s) | 302 |
| Fsp4HI | GCNGC | 1 cut(s) | 314 |
| FspBI | CTAG | 1 cut(s) | 167 |
| GluI | GCNGC | 1 cut(s) | 314 |
| GsuI | CTGGAG | 1 cut(s) | 302 |
| HaeIII | GGCC | 2 cut(s) | 121, 243 |
| HinfI | GANTC | 1 cut(s) | 428 |
| HphI | GGTGA | 1 cut(s) | 172 |
| Hpy166II | GTNNAC | 1 cut(s) | 92 |
| Hpy188I | TCNGA | 2 cut(s) | 142, 210 |
| Hpy188III | TCNNGA | 2 cut(s) | 64, 235 |
| Hpy8I | GTNNAC | 1 cut(s) | 92 |
| HpyAV | CCTTC | 4 cut(s) | 97, 137, 352, 366 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 319 |
| LmnI | GCTCC | 1 cut(s) | 321 |
| LpnPI | CCDG | 5 cut(s) | 49, 80, 272, 332, 372 |
| Lsp1109I | GCAGC | 1 cut(s) | 325 |
| MaeI | CTAG | 1 cut(s) | 167 |
| MluCI | AATT | 2 cut(s) | 11, 449 |
| MnlI | CCTC | 6 cut(s) | 111, 156, 180, 257, 327, 376 |
| MseI | TTAA | 5 cut(s) | 14, 177, 252, 446, 469 |
| MslI | CAYNNNNRTG | 1 cut(s) | 158 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 319 |
| PfeI | GAWTC | 1 cut(s) | 428 |
| PkrI | GCNGC | 1 cut(s) | 315 |
| PshBI | ATTAAT | 1 cut(s) | 252 |
| RsaI | GTAC | 1 cut(s) | 330 |
| RsaNI | GTAC | 1 cut(s) | 329 |
| RseI | CAYNNNNRTG | 1 cut(s) | 158 |
| SaqAI | TTAA | 5 cut(s) | 14, 177, 252, 446, 469 |
| SatI | GCNGC | 1 cut(s) | 314 |
| SetI | ASST | 5 cut(s) | 9, 43, 162, 318, 324 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 158 |
| SmlI | CTYRAG | 1 cut(s) | 233 |
| SmoI | CTYRAG | 1 cut(s) | 233 |
| Sse9I | AATT | 2 cut(s) | 11, 449 |
| SsiI | CCGC | 1 cut(s) | 441 |
| SspMI | CTAG | 1 cut(s) | 167 |
| TasI | AATT | 2 cut(s) | 11, 449 |
| TatI | WGTACW | 1 cut(s) | 328 |
| TfiI | GAWTC | 1 cut(s) | 428 |
| Tru1I | TTAA | 5 cut(s) | 14, 177, 252, 446, 469 |
| Tru9I | TTAA | 5 cut(s) | 14, 177, 252, 446, 469 |
| TseI | GCWGC | 1 cut(s) | 313 |
| TspDTI | ATGAA | 2 cut(s) | 17, 306 |
| VspI | ATTAAT | 1 cut(s) | 252 |
| XspI | CTAG | 1 cut(s) | 167 |