transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom04g17910 pycom07g08170 |
| rosa_chinensis | RchiOBHm_Chr2g0164361 RchiOBHm_Chr5g0025851 RchiOBHm_Chr7g0188301 |
| rosa_laevigata | RLG00000008807 RLG00000012371 RLG00000012376 RLG00000023114 RLG00000026781 |
| rosa_multiflora | Rmu_sc0000650.1_g000022 Rmu_sc0003936.1_g000028 |
| rosa_roxburghii | Rroxscaffold_2G00127760 Rroxscaffold_2G00128620 Rroxscaffold_5G00371280 Rroxscaffold_5G00372980 Rroxscaffold_7G00180250 |
| rosa_rugosa | Rorug02G0200000 Rorug02G0200100 Rorug03G0054500 Rorug04G0056600 Rorug06G0006900 Rorug06G0062200 |
| rosa_samantha | Rh1AG047100 Rh1BG199800 Rh1BG210600 Rh1CG223100 Rh1DG227600 Rh2BG283100 Rh3DG073700 Rh5AG386600 Rh5AG529200 Rh5DG179300 Rh6DG124400 Rh7AG502700 Rh7BG306100 Rh7BG375400 Rh7BG474000 Rh7DG359700 |
| rosa_wichuraiana | Rw1G007110 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 12 |
| AcsI | RAATTY | 5 cut(s) | 25, 194, 235, 310, 386 |
| AfaI | GTAC | 3 cut(s) | 99, 324, 362 |
| AgsI | TTSAA | 7 cut(s) | 51, 79, 95, 201, 310, 368, 386 |
| AluBI | AGCT | 3 cut(s) | 85, 91, 137 |
| AluI | AGCT | 3 cut(s) | 85, 91, 137 |
| ApeKI | GCWGC | 1 cut(s) | 82 |
| ApoI | RAATTY | 5 cut(s) | 25, 194, 235, 310, 386 |
| AsuHPI | GGTGA | 1 cut(s) | 306 |
| BanI | GGYRCC | 1 cut(s) | 12 |
| BbsI | GAAGAC | 1 cut(s) | 339 |
| BbvI | GCAGC | 1 cut(s) | 94 |
| BccI | CCATC | 1 cut(s) | 276 |
| BclI | TGATCA | 1 cut(s) | 295 |
| BfaI | CTAG | 1 cut(s) | 391 |
| BisI | GCNGC | 1 cut(s) | 83 |
| BlsI | GCNGC | 1 cut(s) | 84 |
| BmiI | GGNNCC | 1 cut(s) | 14 |
| BpiI | GAAGAC | 1 cut(s) | 339 |
| BpmI | CTGGAG | 1 cut(s) | 71 |
| BseGI | GGATG | 2 cut(s) | 64, 247 |
| BseXI | GCAGC | 1 cut(s) | 94 |
| BshNI | GGYRCC | 1 cut(s) | 12 |
| Bsp143I | GATC | 2 cut(s) | 6, 295 |
| BspLI | GGNNCC | 1 cut(s) | 14 |
| BspQI | GCTCTTC | 1 cut(s) | 363 |
| BspT107I | GGYRCC | 1 cut(s) | 12 |
| BssMI | GATC | 2 cut(s) | 6, 295 |
| Bst6I | CTCTTC | 1 cut(s) | 363 |
| BstF5I | GGATG | 2 cut(s) | 64, 247 |
| BstKTI | GATC | 2 cut(s) | 9, 298 |
| BstMBI | GATC | 2 cut(s) | 6, 295 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 88, 211 |
| BstV1I | GCAGC | 1 cut(s) | 94 |
| BstV2I | GAAGAC | 1 cut(s) | 339 |
| BtsCI | GGATG | 2 cut(s) | 64, 247 |
| Csp6I | GTAC | 3 cut(s) | 98, 323, 361 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 141, 176 |
| CviAII | CATG | 1 cut(s) | 221 |
| CviJI | RGCY | 6 cut(s) | 47, 85, 91, 137, 164, 205 |
| CviKI_1 | RGCY | 6 cut(s) | 47, 85, 91, 137, 164, 205 |
| CviQI | GTAC | 3 cut(s) | 98, 323, 361 |
| DpnI | GATC | 2 cut(s) | 8, 297 |
| DpnII | GATC | 2 cut(s) | 6, 295 |
| Eam1104I | CTCTTC | 1 cut(s) | 363 |
| EarI | CTCTTC | 1 cut(s) | 363 |
| Eco32I | GATATC | 1 cut(s) | 186 |
| EcoRI | GAATTC | 2 cut(s) | 310, 386 |
| EcoRV | GATATC | 1 cut(s) | 186 |
| FaeI | CATG | 1 cut(s) | 224 |
| FaiI | YATR | 2 cut(s) | 113, 222 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 193, 225 |
| FatI | CATG | 1 cut(s) | 220 |
| FbaI | TGATCA | 1 cut(s) | 295 |
| Fnu4HI | GCNGC | 1 cut(s) | 83 |
| FokI | GGATG | 2 cut(s) | 71, 254 |
| Fsp4HI | GCNGC | 1 cut(s) | 83 |
| FspBI | CTAG | 1 cut(s) | 391 |
| GluI | GCNGC | 1 cut(s) | 83 |
| GsuI | CTGGAG | 1 cut(s) | 71 |
| Hin1II | CATG | 1 cut(s) | 224 |
| HindIII | AAGCTT | 1 cut(s) | 135 |
| HinfI | GANTC | 2 cut(s) | 19, 248 |
| HphI | GGTGA | 1 cut(s) | 306 |
| HpyAV | CCTTC | 1 cut(s) | 97 |
| HpyCH4V | TGCA | 3 cut(s) | 214, 353, 379 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 88, 211 |
| Hsp92II | CATG | 1 cut(s) | 224 |
| Ksp22I | TGATCA | 1 cut(s) | 295 |
| Kzo9I | GATC | 2 cut(s) | 6, 295 |
| LguI | GCTCTTC | 1 cut(s) | 363 |
| LmnI | GCTCC | 1 cut(s) | 90 |
| LpnPI | CCDG | 4 cut(s) | 29, 41, 101, 194 |
| Lsp1109I | GCAGC | 1 cut(s) | 94 |
| MaeI | CTAG | 1 cut(s) | 391 |
| MalI | GATC | 2 cut(s) | 8, 297 |
| MboI | GATC | 2 cut(s) | 6, 295 |
| MboII | GAAGA | 3 cut(s) | 293, 344, 380 |
| MfeI | CAATTG | 1 cut(s) | 374 |
| MluCI | AATT | 8 cut(s) | 25, 194, 235, 272, 310, 374, 381, 386 |
| MmeI | TCCRAC | 1 cut(s) | 176 |
| MseI | TTAA | 1 cut(s) | 116 |
| MslI | CAYNNNNRTG | 1 cut(s) | 219 |
| MunI | CAATTG | 1 cut(s) | 374 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 88, 211 |
| NdeII | GATC | 2 cut(s) | 6, 295 |
| NlaIII | CATG | 1 cut(s) | 224 |
| NlaIV | GGNNCC | 1 cut(s) | 14 |
| PciSI | GCTCTTC | 1 cut(s) | 363 |
| PfeI | GAWTC | 2 cut(s) | 19, 248 |
| PkrI | GCNGC | 1 cut(s) | 84 |
| PspN4I | GGNNCC | 1 cut(s) | 14 |
| RsaI | GTAC | 3 cut(s) | 99, 324, 362 |
| RsaNI | GTAC | 3 cut(s) | 98, 323, 361 |
| RseI | CAYNNNNRTG | 1 cut(s) | 219 |
| SapI | GCTCTTC | 1 cut(s) | 363 |
| SaqAI | TTAA | 1 cut(s) | 116 |
| SatI | GCNGC | 1 cut(s) | 83 |
| Sau3AI | GATC | 2 cut(s) | 6, 295 |
| SetI | ASST | 5 cut(s) | 87, 93, 139, 211, 285 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 219 |
| Sse9I | AATT | 8 cut(s) | 25, 194, 235, 272, 310, 374, 381, 386 |
| SspMI | CTAG | 1 cut(s) | 391 |
| TaqI | TCGA | 1 cut(s) | 330 |
| TasI | AATT | 8 cut(s) | 25, 194, 235, 272, 310, 374, 381, 386 |
| TatI | WGTACW | 2 cut(s) | 97, 322 |
| TfiI | GAWTC | 2 cut(s) | 19, 248 |
| Tru1I | TTAA | 1 cut(s) | 116 |
| Tru9I | TTAA | 1 cut(s) | 116 |
| TseI | GCWGC | 1 cut(s) | 82 |
| TspDTI | ATGAA | 2 cut(s) | 75, 146 |
| XapI | RAATTY | 5 cut(s) | 25, 194, 235, 310, 386 |
| XspI | CTAG | 1 cut(s) | 391 |