Ring finger domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_7g32950 FvH4_7g32960 |
| malus_domestica | MD01G1228600.v1.1 MD07G1299400.v1.1 MD07G1299500.v1.1 MD07G1299600.v1.1 |
| prunus_persica | Prupe.2G319200_v2.0.a1 Prupe.2G319300_v2.0.a1 Prupe.2G319400_v2.0.a1 |
| pyrus_communis | pycom07g27170 |
| rosa_chinensis | RchiOBHm_Chr1g0382911 RchiOBHm_Chr1g0382921 |
| rosa_laevigata | RLG00000026149 |
| rosa_multiflora | Rmu_co8270753.1_g000001 Rmu_co8320179.1_g000001 Rmu_sc0001785.1_g000002 Rmu_sc0010366.1_g000003 |
| rosa_roxburghii | Rroxscaffold_4G00277780 |
| rosa_samantha | Rh1AG462300 Rh1AG462400 Rh1AG462500 Rh1AG462600 Rh1BG419300 Rh1BG419400 Rh1CG433000 Rh1CG433100 Rh1CG433200 Rh1CG433400 Rh1DG451400 Rh1DG451500 |
| rosa_wichuraiana | Rw1G040940 Rw1G040950 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 3 cut(s) | 66, 158, 171 |
| AcuI | CTGAAG | 2 cut(s) | 41, 174 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 158 |
| AjiI | CACGTC | 1 cut(s) | 37 |
| AluBI | AGCT | 2 cut(s) | 19, 109 |
| AluI | AGCT | 2 cut(s) | 19, 109 |
| AlwI | GGATC | 3 cut(s) | 66, 158, 171 |
| AsuHPI | GGTGA | 1 cut(s) | 212 |
| BamHI | GGATCC | 1 cut(s) | 163 |
| BbsI | GAAGAC | 1 cut(s) | 205 |
| BbvCI | CCTCAGC | 1 cut(s) | 72 |
| BceAI | ACGGC | 1 cut(s) | 141 |
| BmgBI | CACGTC | 1 cut(s) | 37 |
| BmiI | GGNNCC | 1 cut(s) | 165 |
| BpiI | GAAGAC | 1 cut(s) | 205 |
| Bpu10I | CCTNAGC | 1 cut(s) | 72 |
| BsaJI | CCNNGG | 1 cut(s) | 167 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 115, 145 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 158 |
| Bse1I | ACTGG | 1 cut(s) | 217 |
| BseDI | CCNNGG | 1 cut(s) | 167 |
| BseGI | GGATG | 2 cut(s) | 10, 189 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 158 |
| BseMII | CTCAG | 1 cut(s) | 63 |
| BseNI | ACTGG | 1 cut(s) | 217 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 158 |
| Bsp143I | GATC | 3 cut(s) | 58, 163, 173 |
| Bsp19I | CCATGG | 1 cut(s) | 167 |
| BspCNI | CTCAG | 1 cut(s) | 64 |
| BspLI | GGNNCC | 1 cut(s) | 165 |
| BspPI | GGATC | 3 cut(s) | 66, 158, 171 |
| BsrI | ACTGG | 1 cut(s) | 217 |
| BssECI | CCNNGG | 1 cut(s) | 167 |
| BssMI | GATC | 3 cut(s) | 58, 163, 173 |
| BssT1I | CCWWGG | 1 cut(s) | 167 |
| Bst4CI | ACNGT | 1 cut(s) | 29 |
| BstDEI | CTNAG | 2 cut(s) | 72, 105 |
| BstDSI | CCRYGG | 1 cut(s) | 167 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 156 |
| BstF5I | GGATG | 2 cut(s) | 10, 189 |
| BstKTI | GATC | 3 cut(s) | 61, 166, 176 |
| BstMBI | GATC | 3 cut(s) | 58, 163, 173 |
| BstV2I | GAAGAC | 1 cut(s) | 205 |
| BstX2I | RGATCY | 2 cut(s) | 58, 163 |
| BstYI | RGATCY | 2 cut(s) | 58, 163 |
| BtgI | CCRYGG | 1 cut(s) | 167 |
| BtrI | CACGTC | 1 cut(s) | 37 |
| BtsCI | GGATG | 2 cut(s) | 10, 189 |
| CviAII | CATG | 1 cut(s) | 168 |
| CviJI | RGCY | 3 cut(s) | 19, 109, 128 |
| CviKI_1 | RGCY | 3 cut(s) | 19, 109, 128 |
| DdeI | CTNAG | 2 cut(s) | 72, 105 |
| DpnI | GATC | 3 cut(s) | 60, 165, 175 |
| DpnII | GATC | 3 cut(s) | 58, 163, 173 |
| Eco130I | CCWWGG | 1 cut(s) | 167 |
| Eco57I | CTGAAG | 2 cut(s) | 41, 174 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 156 |
| EcoT14I | CCWWGG | 1 cut(s) | 167 |
| ErhI | CCWWGG | 1 cut(s) | 167 |
| FaeI | CATG | 1 cut(s) | 171 |
| FaiI | YATR | 2 cut(s) | 45, 169 |
| FatI | CATG | 1 cut(s) | 167 |
| FokI | GGATG | 2 cut(s) | 17, 196 |
| Hin1II | CATG | 1 cut(s) | 171 |
| HincII | GTYRAC | 1 cut(s) | 84 |
| HindII | GTYRAC | 1 cut(s) | 84 |
| HpaI | GTTAAC | 1 cut(s) | 84 |
| HphI | GGTGA | 1 cut(s) | 212 |
| Hpy166II | GTNNAC | 1 cut(s) | 84 |
| Hpy188I | TCNGA | 1 cut(s) | 178 |
| Hpy8I | GTNNAC | 1 cut(s) | 84 |
| HpyAV | CCTTC | 1 cut(s) | 149 |
| HpyCH4III | ACNGT | 1 cut(s) | 29 |
| HpyCH4IV | ACGT | 2 cut(s) | 36, 210 |
| HpyF3I | CTNAG | 2 cut(s) | 72, 105 |
| HpySE526I | ACGT | 2 cut(s) | 36, 210 |
| Hsp92II | CATG | 1 cut(s) | 171 |
| KspAI | GTTAAC | 1 cut(s) | 84 |
| Kzo9I | GATC | 3 cut(s) | 58, 163, 173 |
| LpnPI | CCDG | 3 cut(s) | 85, 100, 165 |
| MaeII | ACGT | 2 cut(s) | 36, 210 |
| MalI | GATC | 3 cut(s) | 60, 165, 175 |
| MboI | GATC | 3 cut(s) | 58, 163, 173 |
| MboII | GAAGA | 2 cut(s) | 34, 205 |
| MflI | RGATCY | 2 cut(s) | 58, 163 |
| MnlI | CCTC | 4 cut(s) | 67, 102, 152, 174 |
| MseI | TTAA | 1 cut(s) | 83 |
| NcoI | CCATGG | 1 cut(s) | 167 |
| NdeII | GATC | 3 cut(s) | 58, 163, 173 |
| NlaIII | CATG | 1 cut(s) | 171 |
| NlaIV | GGNNCC | 1 cut(s) | 165 |
| PspN4I | GGNNCC | 1 cut(s) | 165 |
| PsuI | RGATCY | 2 cut(s) | 58, 163 |
| SaqAI | TTAA | 1 cut(s) | 83 |
| Sau3AI | GATC | 3 cut(s) | 58, 163, 173 |
| SetI | ASST | 7 cut(s) | 21, 39, 89, 104, 111, 154, 213 |
| SgeI | CNNG | 7 cut(s) | 47, 67, 99, 112, 164, 180, 205 |
| StyI | CCWWGG | 1 cut(s) | 167 |
| TaaI | ACNGT | 1 cut(s) | 29 |
| TaiI | ACGT | 2 cut(s) | 39, 213 |
| Tru1I | TTAA | 1 cut(s) | 83 |
| Tru9I | TTAA | 1 cut(s) | 83 |
| TspDTI | ATGAA | 2 cut(s) | 32, 153 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 156 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 141 |