Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0000761

Physical Location & Seq

Genomic Coordinates Forward (+)

86836031 .. 86842001

Gene Structure 5971 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG648900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGGGTGGCAGGAGTTCAAAAGAGGATGGGAGTTTGAGGCAGAATAGTTATGGCTCTAGGTCGTCGTCTTCTTCTTGGAGTGGATATCCTCCAGTTCAATCACCATATGTAGAAAGTCAGGGGTATGCTCCCCAGCAATCCTATCCTCCATCACAGTATTCATATCCGCCACCGCCGCAGGATTATGGTCAAGAAACTCAGGCTTATTATCCACCCCAGCAGCCATCCTATCCATCATCATCATCACAGTATTCCAATCCCCTGCAGCCGCCGCCCCCGGATTATGGGGGGCAAAGGAAGCTGGACAGGAGATATTCGAGAATTGCTGACAGTTACAATTCCCTCGAGGAGGTGACTGAGGCTCTTGCACGTGCTGGACTTGAGTCTTCGAATCTAATAGTCGGTATTGATTTCACAAAGAGCAATGAGTGGACAGGCAAGAACTCGTATAACAGAAGAAGCTTGCATCACATTGGGGATGGTCTAAATCCCTATGAACATGCAATTACCATTATTGGAAAAACCTTGGCTGCTTTTGATGAGGATAACATGATTCCGTGTTATGGTTTTGGAGATGCAACAACCCATGATCAAGATGTTTTTAGTTTCTACCCAAACGATCAACATTGCAATGGGTTTGAGGAAGTATTGACTCGCTACAAGGAAATTGTTCCTCATCTTCGCCTTGCAGGACCGACTTCATTTGCACCTGTAATTGAAATGGCCATGACTATTGTTGAGCAGAGTGGTGGCCAATACCATGTCCTATTGATAATTGCAGATGGCCAGGTAACTAGAAGTGTTGATACTGAGCGTGGCAGGCTAAGTCCACAGGAACAGAAGACAGTTGATGCAATTGTTGAAGCAAGCAAGTTTCCTCTATCAATTATATTGGTTGGTGTTGGAGATGGACCCTGGGACATGATGAAAGAGTTTGATGACAACATTCCTGCTCGGGCATTTGATAATTTCCAATTTGTGAACTTTACGGAAATTATGTCAAAGAAATTGTCATCTTTGCGAAAGGAGACTGAATTTGCTCTAGCAGCATTGATGGAAATTCCGACTCAGTATAAAGCAACGATAGAGCTTAATCTCTTGGGTGGTCAGAAGGGAAATTCTCCCCACAGGGTTCCTCTCCCACCACCTCTCCATGGTGCATCTTTCAACAGTTCGAAACCTTTGTATGGTACGTCATCCTTCAGCAGTTCGAAACCTTTGTATGGTACATCATCCTTCAGCAGTTCGAAACCTTCTCATGAGCCCAGTGTTCCTCCTTATTATGAAGACAGCAGTTCTTTCAGTACAGCTTCAGCTCCACCTGCTTCCAGTTCTACTTATGATAATCAGGTCTGCCCCATCTGCCTTACAAATTCAAAAGACATGGCCTTTGGTTGTGGGCATCAGGTATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009308 GO:0009690 GO:0009850 GO:0009987 GO:0010817 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0034754 GO:0036211 GO:0042445 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0065007 GO:0065008 GO:0070647 GO:0071704 GO:0071944 GO:0080134 GO:0080148 GO:0140096 GO:1901564 GO:2000070

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Copine zf-C3HC4_3

Protein Analysis

471

Amino Acids

51.84

Weight (kDa)

5.27

Isoelectric Point (pI)

59.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Copine	PF07002	154 - 367	3.7e-74	Copine

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01650 AT3G01650 AT5G14420 AT5G14420 AT5G14420 AT5G14420
fragaria_vesca	FvH4_5g06620 FvH4_5g06621 FvH4_5g06621 FvH4_5g06630 FvH4_6g51970 FvH4_6g51970 FvH4_6g51970 FvH4_6g51970 FvH4_6g51970 FvH4_6g51970
malus_domestica	MD06G1162400.v1.1 MD09G1021400.v1.1 MD10G1071300.v1.1 MD14G1168100.v1.1 MD14G1168200.v1.1 MD17G1021400.v1.1
prunus_persica	Prupe.3G295000_v2.0.a1 Prupe.5G163000_v2.0.a1 Prupe.5G163100_v2.0.a1 Prupe.5G163100_v2.0.a1
pyrus_communis	pycom06g14510 pycom111g01780 pycom14g14020 pycom17g01850
rosa_chinensis	RchiOBHm_Chr2g0173441 RchiOBHm_Chr7g0192061 RchiOBHm_Chr7g0192071 RchiOBHm_Chr7g0192081
rosa_laevigata	RLG00000004403 RLG00000004404 RLG00000022190
rosa_multiflora	Rmu_sc0015463.1_g000001 Rmu_sc0019120.1_g000001 Rmu_ssc0000421.1_g000038 Rmu_ssc0000421.1_g000042 Rmu_ssc0000421.1_g000043
rosa_roxburghii	Rroxscaffold_2G00078850 Rroxscaffold_3G00263310 Rroxscaffold_3G00263320
rosa_rugosa	Rorug02G0570400 Rorug02G0570400 Rorug02G0570400 Rorug02G0570500 Rorug02G0570600 Rorug06G0512900 Rorug06G0513000 Rorug06G0513000 Rorug06G0513100 Rorug06G0513200
rosa_samantha	Rh2AG648900 Rh2BG659500 Rh2CG624800 Rh2DG674700 Rh7AG123300 Rh7BG124800 Rh7BG125000 Rh7CG127600 Rh7DG126600
rosa_wichuraiana	Rw0G003640 Rw0G003650 Rw2G053270 Rw7G010490 Rw7G010500 Rw7G010510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1330
AbsI	CCTCGAGG	1 cut(s)	344
Acc36I	ACCTGC	1 cut(s)	1330
AciI	CCGC	5 cut(s)	167, 173, 176, 269, 272
AcoI	YGGCCR	3 cut(s)	723, 751, 784
AcsI	RAATTY	4 cut(s)	1034, 1059, 1117, 1372
AcuI	CTGAAG	3 cut(s)	1186, 1222, 1296
AcvI	CACGTG	1 cut(s)	371
AfaI	GTAC	3 cut(s)	1192, 1228, 1306
AfiI	CCNNNNNNNGG	6 cut(s)	284, 349, 563, 1154, 1187, 1223
AgsI	TTSAA	6 cut(s)	18, 98, 719, 863, 1168, 1377
AjnI	CCWGG	2 cut(s)	786, 914
AluBI	AGCT	5 cut(s)	301, 462, 1090, 1310, 1316
AluI	AGCT	5 cut(s)	301, 462, 1090, 1310, 1316
Alw26I	GTCTC	1 cut(s)	1022
Ama87I	CYCGRG	2 cut(s)	344, 954
AoxI	GGCC	4 cut(s)	723, 751, 784, 1386
ApeKI	GCWGC	4 cut(s)	220, 265, 530, 1046
ApoI	RAATTY	4 cut(s)	1034, 1059, 1117, 1372
ArsI	GACNNNNNNTTYG	4 cut(s)	995, 1027, 1373, 1405
Asp700I	GAANNNNTTC	1 cut(s)	669
AspS9I	GGNCC	2 cut(s)	692, 911
AsuC2I	CCSGG	1 cut(s)	278
AsuHPI	GGTGA	2 cut(s)	93, 364
AsuII	TTCGAA	4 cut(s)	389, 1175, 1211, 1247
AvaI	CYCGRG	2 cut(s)	344, 954
AvaII	GGWCC	2 cut(s)	692, 911
BalI	TGGCCA	3 cut(s)	725, 753, 786
BanII	GRGCYC	1 cut(s)	1266
BarI	GAAGNNNNNNTAC	2 cut(s)	790, 822
BbrPI	CACGTG	1 cut(s)	371
BbsI	GAAGAC	4 cut(s)	60, 378, 848, 1293
BbvI	GCAGC	4 cut(s)	232, 277, 517, 1058
BccI	CCATC	9 cut(s)	20, 157, 232, 241, 473, 776, 902, 1048, 1367
BciT130I	CCWGG	2 cut(s)	788, 916
BclI	TGATCA	1 cut(s)	589
BcnI	CCSGG	1 cut(s)	278
BcoDI	GTCTC	1 cut(s)	1022
BfaI	CTAG	3 cut(s)	57, 795, 1043
BfmI	CTRYAG	1 cut(s)	263
BfuAI	ACCTGC	1 cut(s)	1330
BisI	GCNGC	7 cut(s)	176, 221, 266, 269, 272, 531, 1047
BlsI	GCNGC	7 cut(s)	177, 222, 267, 270, 273, 532, 1048
Bme1390I	CCNGG	3 cut(s)	278, 788, 916
Bme18I	GGWCC	2 cut(s)	692, 911
BmeT110I	CYCGRG	2 cut(s)	344, 954
BmgT120I	GGNCC	2 cut(s)	692, 911
BmiI	GGNNCC	2 cut(s)	913, 1134
BmrFI	CCNGG	3 cut(s)	278, 788, 916
BmrI	ACTGGG	1 cut(s)	1260
BmsI	GCATC	5 cut(s)	475, 565, 841, 1169, 1411
BmuI	ACTGGG	1 cut(s)	1260
BoxI	GACNNNNGTC	1 cut(s)	382
BpiI	GAAGAC	4 cut(s)	60, 378, 848, 1293
BpmI	CTGGAG	1 cut(s)	75
Bpu14I	TTCGAA	4 cut(s)	389, 1175, 1211, 1247
BpuEI	CTTGAG	1 cut(s)	401
BpuMI	CCSGG	1 cut(s)	278
BsaAI	YACGTR	1 cut(s)	371
BsaJI	CCNNGG	5 cut(s)	276, 525, 914, 915, 1153
BsaXI	ACNNNNNCTCC	2 cut(s)	1134, 1164
Bsc4I	CCNNNNNNNGG	6 cut(s)	284, 349, 563, 1154, 1187, 1223
Bse1I	ACTGG	3 cut(s)	92, 1266, 1329
Bse3DI	GCAATG	3 cut(s)	430, 625, 637
BseBI	CCWGG	2 cut(s)	788, 916
BseDI	CCNNGG	5 cut(s)	276, 525, 914, 915, 1153
BseGI	GGATG	5 cut(s)	31, 224, 484, 1196, 1232
BseLI	CCNNNNNNNGG	6 cut(s)	284, 349, 563, 1154, 1187, 1223
BseMI	GCAATG	3 cut(s)	430, 625, 637
BseMII	CTCAG	4 cut(s)	212, 348, 801, 1082
BseNI	ACTGG	3 cut(s)	92, 1266, 1329
BseRI	GAGGAG	1 cut(s)	362
BseXI	GCAGC	4 cut(s)	232, 277, 517, 1058
BseYI	CCCAGC	2 cut(s)	132, 216
BshFI	GGCC	4 cut(s)	725, 753, 786, 1388
BsiHKCI	CYCGRG	2 cut(s)	344, 954
BsiSI	CCGG	1 cut(s)	278
BslFI	GGGAC	1 cut(s)	932
BslI	CCNNNNNNNGG	6 cut(s)	284, 349, 563, 1154, 1187, 1223
BsmAI	GTCTC	1 cut(s)	1022
BsmFI	GGGAC	1 cut(s)	932
BsnI	GGCC	4 cut(s)	725, 753, 786, 1388
BsoBI	CYCGRG	2 cut(s)	344, 954
Bsp119I	TTCGAA	4 cut(s)	389, 1175, 1211, 1247
Bsp1286I	GDGCHC	1 cut(s)	1266
Bsp143I	GATC	2 cut(s)	589, 619
Bsp19I	CCATGG	1 cut(s)	1153
BspACI	CCGC	5 cut(s)	167, 173, 176, 269, 272
BspANI	GGCC	4 cut(s)	725, 753, 786, 1388
BspCNI	CTCAG	4 cut(s)	211, 349, 802, 1081
BspHI	TCATGA	1 cut(s)	1258
BspLI	GGNNCC	2 cut(s)	913, 1134
BspMAI	CTGCAG	1 cut(s)	267
BspMI	ACCTGC	1 cut(s)	1330
BspT104I	TTCGAA	4 cut(s)	389, 1175, 1211, 1247
BsrDI	GCAATG	3 cut(s)	430, 625, 637
BsrI	ACTGG	3 cut(s)	92, 1266, 1329
BssECI	CCNNGG	5 cut(s)	276, 525, 914, 915, 1153
BssMI	GATC	2 cut(s)	589, 619
BssT1I	CCWWGG	2 cut(s)	525, 1153
Bst2UI	CCWGG	2 cut(s)	788, 916
Bst4CI	ACNGT	5 cut(s)	156, 249, 332, 847, 1172
BstBAI	YACGTR	1 cut(s)	371
BstBI	TTCGAA	4 cut(s)	389, 1175, 1211, 1247
BstC8I	GCNNGC	3 cut(s)	464, 821, 868
BstDEI	CTNAG	5 cut(s)	198, 357, 810, 824, 1068
BstDSI	CCRYGG	1 cut(s)	1153
BstENI	CCTNNNNNAGG	1 cut(s)	347
BstF5I	GGATG	5 cut(s)	31, 224, 484, 1196, 1232
BstKTI	GATC	2 cut(s)	592, 622
BstMAI	GTCTC	1 cut(s)	1022
BstMBI	GATC	2 cut(s)	589, 619
BstMWI	GCNNNNNNNGC	7 cut(s)	175, 271, 298, 820, 1046, 1322, 1362
BstNI	CCWGG	2 cut(s)	788, 916
BstNSI	RCATGY	1 cut(s)	503
BstPAI	GACNNNNGTC	1 cut(s)	382
BstSCI	CCNGG	3 cut(s)	276, 786, 914
BstSFI	CTRYAG	1 cut(s)	263
BstV1I	GCAGC	4 cut(s)	232, 277, 517, 1058
BstV2I	GAAGAC	4 cut(s)	60, 378, 848, 1293
BsuRI	GGCC	4 cut(s)	725, 753, 786, 1388
BtgI	CCRYGG	1 cut(s)	1153
BtsCI	GGATG	5 cut(s)	31, 224, 484, 1196, 1232
BtsIMutI	CAGTG	1 cut(s)	1273
BveI	ACCTGC	1 cut(s)	1330
Cac8I	GCNNGC	3 cut(s)	464, 821, 868
CciI	TCATGA	1 cut(s)	1258
Cfr13I	GGNCC	2 cut(s)	692, 911
Csp6I	GTAC	3 cut(s)	1191, 1227, 1305
CviAII	CATG	9 cut(s)	500, 550, 587, 727, 761, 922, 1154, 1259, 1384
CviQI	GTAC	3 cut(s)	1191, 1227, 1305
DdeI	CTNAG	5 cut(s)	198, 357, 810, 824, 1068
DpnI	GATC	2 cut(s)	591, 621
DpnII	GATC	2 cut(s)	589, 619
EaeI	YGGCCR	3 cut(s)	723, 751, 784
EciI	GGCGGA	1 cut(s)	156
Eco130I	CCWWGG	2 cut(s)	525, 1153
Eco24I	GRGCYC	1 cut(s)	1266
Eco32I	GATATC	1 cut(s)	86
Eco47I	GGWCC	2 cut(s)	692, 911
Eco57I	CTGAAG	3 cut(s)	1186, 1222, 1296
Eco72I	CACGTG	1 cut(s)	371
Eco88I	CYCGRG	2 cut(s)	344, 954
EcoNI	CCTNNNNNAGG	1 cut(s)	347
EcoRII	CCWGG	2 cut(s)	786, 914
EcoRV	GATATC	1 cut(s)	86
EcoT14I	CCWWGG	2 cut(s)	525, 1153
EcoT38I	GRGCYC	1 cut(s)	1266
ErhI	CCWWGG	2 cut(s)	525, 1153
FaeI	CATG	9 cut(s)	503, 553, 590, 730, 764, 925, 1157, 1262, 1387
FaqI	GGGAC	1 cut(s)	932
FatI	CATG	9 cut(s)	499, 549, 586, 726, 760, 921, 1153, 1258, 1383
FauNDI	CATATG	1 cut(s)	106
FbaI	TGATCA	1 cut(s)	589
Fnu4HI	GCNGC	7 cut(s)	176, 221, 266, 269, 272, 531, 1047
FokI	GGATG	5 cut(s)	38, 211, 491, 1183, 1219
FriOI	GRGCYC	1 cut(s)	1266
Fsp4HI	GCNGC	7 cut(s)	176, 221, 266, 269, 272, 531, 1047
FspBI	CTAG	3 cut(s)	57, 795, 1043
GluI	GCNGC	7 cut(s)	176, 221, 266, 269, 272, 531, 1047
GsaI	CCCAGC	2 cut(s)	136, 220
GsuI	CTGGAG	1 cut(s)	75
HaeIII	GGCC	4 cut(s)	725, 753, 786, 1388
HapII	CCGG	1 cut(s)	278
Hin1II	CATG	9 cut(s)	503, 553, 590, 730, 764, 925, 1157, 1262, 1387
HindIII	AAGCTT	1 cut(s)	460
HinfI	GANTC	5 cut(s)	383, 391, 553, 652, 1066
HpaII	CCGG	1 cut(s)	278
HphI	GGTGA	2 cut(s)	93, 364
Hpy166II	GTNNAC	3 cut(s)	432, 830, 982
Hpy188I	TCNGA	2 cut(s)	1065, 1110
Hpy188III	TCNNGA	4 cut(s)	191, 318, 593, 1259
Hpy8I	GTNNAC	3 cut(s)	432, 830, 982
Hpy99I	CGWCG	1 cut(s)	67
HpyAV	CCTTC	4 cut(s)	1105, 1210, 1246, 1263
HpyCH4III	ACNGT	5 cut(s)	156, 249, 332, 847, 1172
HpyCH4IV	ACGT	2 cut(s)	370, 1193
HpyF10VI	GCNNNNNNNGC	7 cut(s)	175, 271, 298, 820, 1046, 1322, 1362
HpyF3I	CTNAG	5 cut(s)	198, 357, 810, 824, 1068
HpySE526I	ACGT	2 cut(s)	370, 1193
Hsp92II	CATG	9 cut(s)	503, 553, 590, 730, 764, 925, 1157, 1262, 1387
Ksp22I	TGATCA	1 cut(s)	589
Kzo9I	GATC	2 cut(s)	589, 619
LmnI	GCTCC	2 cut(s)	133, 1321
Lsp1109I	GCAGC	4 cut(s)	232, 277, 517, 1058
LweI	GCATC	5 cut(s)	475, 565, 841, 1169, 1411
MaeI	CTAG	3 cut(s)	57, 795, 1043
MaeII	ACGT	2 cut(s)	370, 1193
MaeIII	GTNAC	3 cut(s)	332, 352, 790
MalI	GATC	2 cut(s)	591, 621
MboI	GATC	2 cut(s)	589, 619
MboII	GAAGA	7 cut(s)	60, 63, 378, 468, 671, 853, 1298
MfeI	CAATTG	1 cut(s)	855
MhlI	GDGCHC	1 cut(s)	1266
MlsI	TGGCCA	3 cut(s)	725, 753, 786
MluNI	TGGCCA	3 cut(s)	725, 753, 786
MlyI	GAGTC	3 cut(s)	392, 646, 1060
MmeI	TCCRAC	2 cut(s)	883, 1088
Mox20I	TGGCCA	3 cut(s)	725, 753, 786
MroXI	GAANNNNTTC	1 cut(s)	669
MscI	TGGCCA	3 cut(s)	725, 753, 786
MseI	TTAA	2 cut(s)	1092, 1414
MslI	CAYNNNNRTG	1 cut(s)	630
Msp20I	TGGCCA	3 cut(s)	725, 753, 786
MspI	CCGG	1 cut(s)	278
MspR9I	CCNGG	3 cut(s)	278, 788, 916
MunI	CAATTG	1 cut(s)	855
MvaI	CCWGG	2 cut(s)	788, 916
MwoI	GCNNNNNNNGC	7 cut(s)	175, 271, 298, 820, 1046, 1322, 1362
NciI	CCSGG	1 cut(s)	278
NcoI	CCATGG	1 cut(s)	1153
NdeI	CATATG	1 cut(s)	106
NdeII	GATC	2 cut(s)	589, 619
NlaIII	CATG	9 cut(s)	503, 553, 590, 730, 764, 925, 1157, 1262, 1387
NlaIV	GGNNCC	2 cut(s)	913, 1134
NmuCI	GTSAC	1 cut(s)	352
NspI	RCATGY	1 cut(s)	503
NspV	TTCGAA	4 cut(s)	389, 1175, 1211, 1247
PaeR7I	CTCGAG	1 cut(s)	344
PagI	TCATGA	1 cut(s)	1258
PaqCI	CACCTGC	1 cut(s)	1330
PasI	CCCWGGG	1 cut(s)	915
PdmI	GAANNNNTTC	1 cut(s)	669
PfeI	GAWTC	2 cut(s)	391, 553
PkrI	GCNGC	7 cut(s)	177, 222, 267, 270, 273, 532, 1048
PleI	GAGTC	3 cut(s)	391, 646, 1060
PmaCI	CACGTG	1 cut(s)	371
PmlI	CACGTG	1 cut(s)	371
PpsI	GAGTC	3 cut(s)	391, 646, 1060
Ppu21I	YACGTR	1 cut(s)	371
PshAI	GACNNNNGTC	1 cut(s)	382
Psp6I	CCWGG	2 cut(s)	786, 914
PspCI	CACGTG	1 cut(s)	371
PspFI	CCCAGC	2 cut(s)	132, 216
PspGI	CCWGG	2 cut(s)	786, 914
PspN4I	GGNNCC	2 cut(s)	913, 1134
PspPI	GGNCC	2 cut(s)	692, 911
PspXI	VCTCGAGB	1 cut(s)	344
PstI	CTGCAG	1 cut(s)	267
RsaI	GTAC	3 cut(s)	1192, 1228, 1306
RsaNI	GTAC	3 cut(s)	1191, 1227, 1305
RseI	CAYNNNNRTG	1 cut(s)	630
SaqAI	TTAA	2 cut(s)	1092, 1414
SatI	GCNGC	7 cut(s)	176, 221, 266, 269, 272, 531, 1047
Sau3AI	GATC	2 cut(s)	589, 619
Sau96I	GGNCC	2 cut(s)	692, 911
SchI	GAGTC	3 cut(s)	392, 646, 1060
ScrFI	CCNGG	3 cut(s)	278, 788, 916
SduI	GDGCHC	1 cut(s)	1266
SfaNI	GCATC	5 cut(s)	475, 565, 841, 1169, 1411
SfcI	CTRYAG	1 cut(s)	263
Sfr274I	CTCGAG	1 cut(s)	344
SfuI	TTCGAA	4 cut(s)	389, 1175, 1211, 1247
SinI	GGWCC	2 cut(s)	692, 911
SlaI	CTCGAG	1 cut(s)	344
SmiMI	CAYNNNNRTG	1 cut(s)	630
SmlI	CTYRAG	2 cut(s)	344, 380
SmoI	CTYRAG	2 cut(s)	344, 380
SsiI	CCGC	5 cut(s)	167, 173, 176, 269, 272
SspMI	CTAG	3 cut(s)	57, 795, 1043
StyD4I	CCNGG	3 cut(s)	276, 786, 914
StyI	CCWWGG	2 cut(s)	525, 1153
TaaI	ACNGT	5 cut(s)	156, 249, 332, 847, 1172
TaiI	ACGT	2 cut(s)	373, 1196
TaqI	TCGA	6 cut(s)	317, 345, 389, 1175, 1211, 1247
TaqII	GACCGA	1 cut(s)	709
TatI	WGTACW	1 cut(s)	1304
TauI	GCSGC	3 cut(s)	178, 271, 274
TfiI	GAWTC	2 cut(s)	391, 553
Tru1I	TTAA	2 cut(s)	1092, 1414
Tru9I	TTAA	2 cut(s)	1092, 1414
TscAI	CASTG	1 cut(s)	1273
TseFI	GTSAC	1 cut(s)	352
TseI	GCWGC	4 cut(s)	220, 265, 530, 1046
Tsp45I	GTSAC	1 cut(s)	352
TspDTI	ATGAA	5 cut(s)	150, 510, 690, 941, 1299
TspGWI	ACGGA	2 cut(s)	546, 1004
TspRI	CASTG	1 cut(s)	1273
VpaK11BI	GGWCC	2 cut(s)	692, 911
XagI	CCTNNNNNAGG	1 cut(s)	347
XapI	RAATTY	4 cut(s)	1034, 1059, 1117, 1372
XceI	RCATGY	1 cut(s)	503
XhoI	CTCGAG	1 cut(s)	344
XmnI	GAANNNNTTC	1 cut(s)	669
XspI	CTAG	3 cut(s)	57, 795, 1043

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.