Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00135

Orthogroup ID

OG0000761

Physical Location & Seq

Genomic Coordinates Reverse (-)

24917 .. 26629

Gene Structure 1713 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G003640.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGGCGCGCCGCAATCACTTCCTGATTGTAATCAATTCCATGATCGCTGCTTTGTTCTTCACATTGCATTGTATTGGATGTACTGCTGCAGTTAGGGGGTCCTCGAACGGAGATGGTGTAGGGCAGTGGCAACTGCTTCTGGACAACACTGAAGTGGTGGCAATGCATATGACGTTAACTCACCATAACACGGTCATTATCTTTGACCAAACAGAAGCAGGCCCTTCTGGGCACCGGCTTAGAAGGCGCTACAATGGAACTAGGTGTACTCAATTCCGCAATGACTTGGCAGACTCATCATGCTATGTTCACTCGGTTGAGTATGGCATTTCTGGTAACAAGTTGAGACCTCTGAGGCTTTCCACTGATACATGGTGCTCCTCAGGTTCCTTCTTGAGCAATGGGACACTTCTACAAACCGGTGGACATGGGAGCGGTGCTCAAGGAATTCGATACTTTAGTCCTTGTGGGGGAAATGATAACTGCGATTGGAGGGAATCGCGGCAATCACTAGCTGATGATCGTTGGTATGCTTCCAGTCTACTACTCCCAGAGGAGGATCGGGTTATTGTGGTAGGTGGAAGAAGAGTCTTTACTTATGAATTTATACCAAAGCAGTATTCCAATGAAGGCTCTTTTGACTTTCCATTCTTGCGCAACACACATCAAAGAAGGCAAGGAGGAAACAACCTCTATCCCTTCCTTCACATTTGTCCAGATGGCAGATTGTTCATATTTGCCAACCGAGACTCGATTCTCTTCAACTACAAAGAGAACAGGGTGGTCAAGCACTTCCCACGCATACCCGGAGATGGCTCCAGGAACTACCCGAGCTCTGGCTCGTCGGTCATCCTCCCTTTACATTACACAAACGGCTTTGAAAAGGCGGAGGTCATGGTGTGTGGTGGTGCGGCCAGTGGAGCTTACAGTGCAGCAGGAGATGGCAGGTTCTTGAAAGGTTTGAGCTCTTGTGGAAGAATGGTGATCACGGGTAACAGACACAAGTGGAACATGGAGAACATGCCCGGTCCACGCCTCCTATGCGACATGCTGCTCCTCCCAACCGGAGATGTCCTGATCATCAACGGGGCTAAACGTGGTGCTGGAGGTTGGAACAATGCAAGAAATGCTTCACTCGAGCCCTACCTTTACCACCCAAACAAGACAGTAGGCAAAAGGTTTTCAGTGCTCAAGTCGACACGAATTTCTAGAATGTATCACTCCTCAGCCATTCTCTTACCTGATGGGAGGGTTTTAGTTGCCGGTGGTAACCCTCACAATAGGTACGTTTTCGAAAATGTGGCATACCCAACTGAGCTTAGGCTACAAGCATTTGTTCCAGACTATATGGGTAGTCAGCACCATCAATTTAGACCCACTAATGTGACCATACACTATGGCCATAATGATCTTTATGGTGTGAGGTATGGAGGAGAGTTCAATGTGAGCTTTTGGTTGGGGAGTAAGCCGAGCAATGCGGTGGAGTTCAGTGCTTATGCTCCGCCATTCACGTCACACTCGATATCGATGAATCAGAGGCTGCTGAGGCTGAGGTGCAAGAGTTTGGTGAGGGATCAAGGTGGATGGGTAGTTGCAGTGTTGGAGGCTCCTCCCTCTCCTTCCGTTGCGCCAGCTGGTTATTACTTGCTTACTGTTGTGAACGGTGGAATTCCTAGTCTGTCTCAGTGGATTAGGATTCTACAGATTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF1929 Glyoxal_oxid_N

Protein Analysis

570

Amino Acids

63.37

Weight (kDa)

9.44

Isoelectric Point (pI)

48.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyoxal_oxid_N	PF07250	55 - 449	2.2e-167	Glyoxal oxidase N-terminus
GO-like_E_set	PF09118	470 - 566	2.2e-21	Galactose oxidase-like, Early set domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01650 AT3G01650 AT5G14420 AT5G14420 AT5G14420 AT5G14420
fragaria_vesca	FvH4_5g06620 FvH4_5g06621 FvH4_5g06621 FvH4_5g06630 FvH4_6g51970 FvH4_6g51970 FvH4_6g51970 FvH4_6g51970 FvH4_6g51970 FvH4_6g51970
malus_domestica	MD06G1162400.v1.1 MD09G1021400.v1.1 MD10G1071300.v1.1 MD14G1168100.v1.1 MD14G1168200.v1.1 MD17G1021400.v1.1
prunus_persica	Prupe.3G295000_v2.0.a1 Prupe.5G163000_v2.0.a1 Prupe.5G163100_v2.0.a1 Prupe.5G163100_v2.0.a1
pyrus_communis	pycom06g14510 pycom111g01780 pycom14g14020 pycom17g01850
rosa_chinensis	RchiOBHm_Chr2g0173441 RchiOBHm_Chr7g0192061 RchiOBHm_Chr7g0192071 RchiOBHm_Chr7g0192081
rosa_laevigata	RLG00000004403 RLG00000004404 RLG00000022190
rosa_multiflora	Rmu_sc0015463.1_g000001 Rmu_sc0019120.1_g000001 Rmu_ssc0000421.1_g000038 Rmu_ssc0000421.1_g000042 Rmu_ssc0000421.1_g000043
rosa_roxburghii	Rroxscaffold_2G00078850 Rroxscaffold_3G00263310 Rroxscaffold_3G00263320
rosa_rugosa	Rorug02G0570400 Rorug02G0570400 Rorug02G0570400 Rorug02G0570500 Rorug02G0570600 Rorug06G0512900 Rorug06G0513000 Rorug06G0513000 Rorug06G0513100 Rorug06G0513200
rosa_samantha	Rh2AG648900 Rh2BG659500 Rh2CG624800 Rh2DG674700 Rh7AG123300 Rh7BG124800 Rh7BG125000 Rh7CG127600 Rh7DG126600
rosa_wichuraiana	Rw0G003640 Rw0G003650 Rw2G053270 Rw7G010490 Rw7G010500 Rw7G010510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	656
Acc36I	ACCTGC	1 cut(s)	936
AccB1I	GGYRCC	1 cut(s)	231
AccBSI	CCGCTC	1 cut(s)	435
AccI	GTMKAC	2 cut(s)	541, 1196
AccII	CGCG	2 cut(s)	7, 502
AciI	CCGC	8 cut(s)	10, 277, 435, 502, 887, 911, 1478, 1502
AclWI	GGATC	2 cut(s)	567, 1581
AcoI	YGGCCR	2 cut(s)	912, 1399
AcsI	RAATTY	4 cut(s)	447, 602, 1203, 1668
AcuI	CTGAAG	1 cut(s)	171
AfaI	GTAC	3 cut(s)	82, 268, 1286
AfiI	CCNNNNNNNGG	5 cut(s)	190, 470, 556, 812, 836
AgeI	ACCGGT	1 cut(s)	419
AgsI	TTSAA	4 cut(s)	763, 881, 955, 1441
AjiI	CACGTC	1 cut(s)	1512
AjnI	CCWGG	1 cut(s)	818
AjuI	GAANNNNNNNTTGG	2 cut(s)	604, 636
AleI	CACNNNNGTG	2 cut(s)	152, 1382
AluBI	AGCT	7 cut(s)	515, 834, 923, 966, 1318, 1449, 1634
AluI	AGCT	7 cut(s)	515, 834, 923, 966, 1318, 1449, 1634
Alw21I	GWGCWC	5 cut(s)	380, 442, 836, 968, 1191
Alw26I	GTCTC	3 cut(s)	340, 741, 1686
AlwI	GGATC	2 cut(s)	567, 1581
AlwNI	CAGNNNCTG	1 cut(s)	1540
Ama87I	CYCGRG	2 cut(s)	829, 1136
AoxI	GGCC	3 cut(s)	220, 912, 1399
ApeKI	GCWGC	5 cut(s)	47, 86, 932, 1051, 1540
ApoI	RAATTY	4 cut(s)	447, 602, 1203, 1668
AscI	GGCGCGCC	1 cut(s)	5
AsiGI	ACCGGT	1 cut(s)	419
Asp700I	GAANNNNTTC	1 cut(s)	1129
AspLEI	GCGC	5 cut(s)	7, 9, 249, 657, 1630
AspS9I	GGNCC	3 cut(s)	99, 221, 1028
AsuC2I	CCSGG	2 cut(s)	807, 1026
AsuHPI	GGTGA	3 cut(s)	173, 994, 1579
AsuII	TTCGAA	1 cut(s)	1293
AvaI	CYCGRG	2 cut(s)	829, 1136
AvaII	GGWCC	2 cut(s)	99, 1028
AxyI	CCTNAGG	1 cut(s)	382
BaeGI	GKGCMC	1 cut(s)	234
BaeI	ACNNNNGTAYC	2 cut(s)	445, 478
BalI	TGGCCA	1 cut(s)	1401
BanI	GGYRCC	1 cut(s)	231
BanII	GRGCYC	3 cut(s)	836, 968, 1143
BarI	GAAGNNNNNNTAC	2 cut(s)	577, 609
Bbv12I	GWGCWC	5 cut(s)	380, 442, 836, 968, 1191
BbvCI	CCTCAGC	3 cut(s)	1225, 1544, 1550
BbvI	GCAGC	5 cut(s)	34, 73, 944, 1038, 1527
BccI	CCATC	7 cut(s)	107, 713, 806, 935, 1238, 1371, 1578
BceAI	ACGGC	1 cut(s)	889
BciT130I	CCWGG	1 cut(s)	820
BclI	TGATCA	2 cut(s)	984, 1077
BcnI	CCSGG	2 cut(s)	807, 1026
BcoDI	GTCTC	3 cut(s)	340, 741, 1686
BfaI	CTAG	4 cut(s)	261, 512, 1209, 1674
BfmI	CTRYAG	2 cut(s)	87, 1700
BfoI	RGCGCY	1 cut(s)	250
BfuAI	ACCTGC	1 cut(s)	936
BisI	GCNGC	8 cut(s)	10, 48, 87, 503, 912, 933, 1052, 1541
BlsI	GCNGC	8 cut(s)	11, 49, 88, 504, 913, 934, 1053, 1542
Bme1390I	CCNGG	3 cut(s)	807, 820, 1026
Bme18I	GGWCC	2 cut(s)	99, 1028
BmeT110I	CYCGRG	2 cut(s)	829, 1136
BmgBI	CACGTC	1 cut(s)	1512
BmgT120I	GGNCC	3 cut(s)	99, 221, 1028
BmiI	GGNNCC	5 cut(s)	100, 233, 388, 817, 1608
BmrFI	CCNGG	3 cut(s)	807, 820, 1026
BplI	GAGNNNNNCTC	2 cut(s)	424, 456
BpmI	CTGGAG	2 cut(s)	802, 1125
Bpu10I	CCTNAGC	4 cut(s)	1225, 1319, 1544, 1550
Bpu14I	TTCGAA	1 cut(s)	1293
BpuEI	CTTGAG	3 cut(s)	415, 426, 1175
BpuMI	CCSGG	2 cut(s)	807, 1026
Bsa29I	ATCGAT	1 cut(s)	1526
BsaBI	GATNNNNATC	1 cut(s)	29
BsaI	GGTCTC	1 cut(s)	340
BsaWI	WCCGGW	2 cut(s)	419, 1064
BsaXI	ACNNNNNCTCC	2 cut(s)	102, 132
Bsc4I	CCNNNNNNNGG	5 cut(s)	190, 470, 556, 812, 836
Bse118I	RCCGGY	3 cut(s)	234, 419, 1262
Bse1I	ACTGG	2 cut(s)	537, 915
Bse21I	CCTNAGG	1 cut(s)	382
Bse3DI	GCAATG	5 cut(s)	62, 168, 286, 406, 1480
Bse8I	GATNNNNATC	1 cut(s)	29
BseBI	CCWGG	1 cut(s)	820
BseCI	ATCGAT	1 cut(s)	1526
BseGI	GGATG	3 cut(s)	83, 849, 1589
BseJI	GATNNNNATC	1 cut(s)	29
BseLI	CCNNNNNNNGG	5 cut(s)	190, 470, 556, 812, 836
BseMI	GCAATG	5 cut(s)	62, 168, 286, 406, 1480
BseMII	CTCAG	7 cut(s)	344, 396, 1239, 1305, 1535, 1541, 1697
BseNI	ACTGG	2 cut(s)	537, 915
BsePI	GCGCGC	1 cut(s)	5
BseRI	GAGGAG	6 cut(s)	370, 569, 1046, 1213, 1446, 1599
BseSI	GKGCMC	1 cut(s)	234
BseXI	GCAGC	5 cut(s)	34, 73, 944, 1038, 1527
BsgI	GTGCAG	1 cut(s)	951
Bsh1236I	CGCG	2 cut(s)	7, 502
BshFI	GGCC	3 cut(s)	222, 914, 1401
BshNI	GGYRCC	1 cut(s)	231
BshTI	ACCGGT	1 cut(s)	419
BshVI	ATCGAT	1 cut(s)	1526
BsiHKAI	GWGCWC	5 cut(s)	380, 442, 836, 968, 1191
BsiHKCI	CYCGRG	2 cut(s)	829, 1136
BsiSI	CCGG	6 cut(s)	235, 420, 807, 1026, 1065, 1263
BslFI	GGGAC	1 cut(s)	418
BslI	CCNNNNNNNGG	5 cut(s)	190, 470, 556, 812, 836
BsmAI	GTCTC	3 cut(s)	340, 741, 1686
BsmFI	GGGAC	1 cut(s)	418
BsnI	GGCC	3 cut(s)	222, 914, 1401
Bso31I	GGTCTC	1 cut(s)	340
BsoBI	CYCGRG	2 cut(s)	829, 1136
Bsp119I	TTCGAA	1 cut(s)	1293
Bsp1286I	GDGCHC	7 cut(s)	234, 380, 442, 836, 968, 1143, 1191
Bsp143I	GATC	7 cut(s)	42, 520, 559, 984, 1077, 1408, 1573
BspACI	CCGC	8 cut(s)	10, 277, 435, 502, 887, 911, 1478, 1502
BspANI	GGCC	3 cut(s)	222, 914, 1401
BspCNI	CTCAG	7 cut(s)	345, 395, 1238, 1306, 1536, 1542, 1696
BspDI	ATCGAT	1 cut(s)	1526
BspFNI	CGCG	2 cut(s)	7, 502
BspLI	GGNNCC	5 cut(s)	100, 233, 388, 817, 1608
BspMAI	CTGCAG	1 cut(s)	91
BspMI	ACCTGC	1 cut(s)	936
BspPI	GGATC	2 cut(s)	567, 1581
BspT104I	TTCGAA	1 cut(s)	1293
BspT107I	GGYRCC	1 cut(s)	231
BspTNI	GGTCTC	1 cut(s)	340
BsrBI	CCGCTC	1 cut(s)	435
BsrDI	GCAATG	5 cut(s)	62, 168, 286, 406, 1480
BsrFI	RCCGGY	3 cut(s)	234, 419, 1262
BsrI	ACTGG	2 cut(s)	537, 915
BssAI	RCCGGY	3 cut(s)	234, 419, 1262
BssHII	GCGCGC	1 cut(s)	5
BssMI	GATC	7 cut(s)	42, 520, 559, 984, 1077, 1408, 1573
Bst2UI	CCWGG	1 cut(s)	820
Bst4CI	ACNGT	5 cut(s)	193, 929, 1168, 1654, 1664
Bst6I	CTCTTC	2 cut(s)	580, 764
BstAPI	GCANNNNNTGC	1 cut(s)	1127
BstBI	TTCGAA	1 cut(s)	1293
BstC8I	GCNNGC	3 cut(s)	7, 220, 1632
BstDEI	CTNAG	9 cut(s)	239, 353, 382, 1225, 1314, 1319, 1544, 1550, 1683
BstEII	GGTNACC	1 cut(s)	1268
BstF5I	GGATG	3 cut(s)	83, 849, 1589
BstFNI	CGCG	2 cut(s)	7, 502
BstH2I	RGCGCY	1 cut(s)	250
BstHHI	GCGC	5 cut(s)	7, 9, 249, 657, 1630
BstKTI	GATC	7 cut(s)	45, 523, 562, 987, 1080, 1411, 1576
BstMAI	GTCTC	3 cut(s)	340, 741, 1686
BstMBI	GATC	7 cut(s)	42, 520, 559, 984, 1077, 1408, 1573
BstMWI	GCNNNNNNNGC	6 cut(s)	244, 920, 929, 1041, 1127, 1546
BstNI	CCWGG	1 cut(s)	820
BstNSI	RCATGY	2 cut(s)	1024, 1051
BstPI	GGTNACC	1 cut(s)	1268
BstSCI	CCNGG	3 cut(s)	805, 818, 1024
BstSFI	CTRYAG	2 cut(s)	87, 1700
BstSLI	GKGCMC	1 cut(s)	234
BstUI	CGCG	2 cut(s)	7, 502
BstV1I	GCAGC	5 cut(s)	34, 73, 944, 1038, 1527
Bsu15I	ATCGAT	1 cut(s)	1526
Bsu36I	CCTNAGG	1 cut(s)	382
BsuRI	GGCC	3 cut(s)	222, 914, 1401
BsuTUI	ATCGAT	1 cut(s)	1526
BtrI	CACGTC	1 cut(s)	1512
BtsCI	GGATG	3 cut(s)	83, 849, 1589
BtsI	GCAGTG	2 cut(s)	131, 1602
BtsIMutI	CAGTG	9 cut(s)	131, 147, 363, 922, 934, 1191, 1495, 1602, 1691
BveI	ACCTGC	1 cut(s)	936
Cac8I	GCNNGC	3 cut(s)	7, 220, 1632
CaiI	CAGNNNCTG	1 cut(s)	1540
CfoI	GCGC	5 cut(s)	7, 9, 249, 657, 1630
Cfr10I	RCCGGY	3 cut(s)	234, 419, 1262
Cfr13I	GGNCC	3 cut(s)	99, 221, 1028
ClaI	ATCGAT	1 cut(s)	1526
Csp6I	GTAC	3 cut(s)	81, 267, 1285
CspAI	ACCGGT	1 cut(s)	419
CviAII	CATG	8 cut(s)	40, 300, 372, 428, 895, 1012, 1021, 1048
CviQI	GTAC	3 cut(s)	81, 267, 1285
DdeI	CTNAG	9 cut(s)	239, 353, 382, 1225, 1314, 1319, 1544, 1550, 1683
DpnI	GATC	7 cut(s)	44, 522, 561, 986, 1079, 1410, 1575
DpnII	GATC	7 cut(s)	42, 520, 559, 984, 1077, 1408, 1573
EaeI	YGGCCR	2 cut(s)	912, 1399
Eam1104I	CTCTTC	2 cut(s)	580, 764
EarI	CTCTTC	2 cut(s)	580, 764
EciI	GGCGGA	2 cut(s)	902, 1491
Ecl136II	GAGCTC	2 cut(s)	834, 966
Eco24I	GRGCYC	3 cut(s)	836, 968, 1143
Eco31I	GGTCTC	1 cut(s)	340
Eco32I	GATATC	1 cut(s)	1524
Eco47I	GGWCC	2 cut(s)	99, 1028
Eco53kI	GAGCTC	2 cut(s)	834, 966
Eco57I	CTGAAG	1 cut(s)	171
Eco81I	CCTNAGG	1 cut(s)	382
Eco88I	CYCGRG	2 cut(s)	829, 1136
Eco91I	GGTNACC	1 cut(s)	1268
EcoICRI	GAGCTC	2 cut(s)	834, 966
EcoO109I	RGGNCCY	2 cut(s)	99, 221
EcoO65I	GGTNACC	1 cut(s)	1268
EcoRI	GAATTC	2 cut(s)	447, 1668
EcoRII	CCWGG	1 cut(s)	818
EcoRV	GATATC	1 cut(s)	1524
EcoT22I	ATGCAT	1 cut(s)	168
EcoT38I	GRGCYC	3 cut(s)	836, 968, 1143
FaeI	CATG	8 cut(s)	43, 303, 375, 431, 898, 1015, 1024, 1051
FalI	AAGNNNNNCTT	2 cut(s)	1114, 1146
FaqI	GGGAC	1 cut(s)	418
FatI	CATG	8 cut(s)	39, 299, 371, 427, 894, 1011, 1020, 1047
FauNDI	CATATG	1 cut(s)	168
FbaI	TGATCA	2 cut(s)	984, 1077
FblI	GTMKAC	2 cut(s)	541, 1196
Fnu4HI	GCNGC	8 cut(s)	10, 48, 87, 503, 912, 933, 1052, 1541
FokI	GGATG	3 cut(s)	90, 836, 1596
FriOI	GRGCYC	3 cut(s)	836, 968, 1143
Fsp4HI	GCNGC	8 cut(s)	10, 48, 87, 503, 912, 933, 1052, 1541
FspBI	CTAG	4 cut(s)	261, 512, 1209, 1674
FspI	TGCGCA	1 cut(s)	656
GlaI	GCGC	5 cut(s)	6, 8, 248, 656, 1629
GluI	GCNGC	8 cut(s)	10, 48, 87, 503, 912, 933, 1052, 1541
GsuI	CTGGAG	2 cut(s)	802, 1125
HaeII	RGCGCY	1 cut(s)	250
HaeIII	GGCC	3 cut(s)	222, 914, 1401
HapII	CCGG	6 cut(s)	235, 420, 807, 1026, 1065, 1263
HhaI	GCGC	5 cut(s)	7, 9, 249, 657, 1630
Hin1II	CATG	8 cut(s)	43, 303, 375, 431, 898, 1015, 1024, 1051
Hin6I	GCGC	5 cut(s)	5, 7, 247, 655, 1628
HinP1I	GCGC	5 cut(s)	5, 7, 247, 655, 1628
HincII	GTYRAC	2 cut(s)	177, 1197
HindII	GTYRAC	2 cut(s)	177, 1197
HinfI	GANTC	7 cut(s)	293, 497, 588, 749, 754, 1531, 1696
HpaI	GTTAAC	1 cut(s)	177
HpaII	CCGG	6 cut(s)	235, 420, 807, 1026, 1065, 1263
HphI	GGTGA	3 cut(s)	173, 994, 1579
Hpy166II	GTNNAC	8 cut(s)	177, 267, 310, 425, 542, 1031, 1197, 1660
Hpy188I	TCNGA	2 cut(s)	354, 1536
Hpy188III	TCNNGA	9 cut(s)	22, 140, 394, 716, 952, 1075, 1209, 1340, 1710
Hpy8I	GTNNAC	8 cut(s)	177, 267, 310, 425, 542, 1031, 1197, 1660
Hpy99I	CGWCG	1 cut(s)	847
HpyAV	CCTTC	8 cut(s)	234, 237, 400, 623, 666, 709, 713, 1629
HpyCH4III	ACNGT	5 cut(s)	193, 929, 1168, 1654, 1664
HpyCH4IV	ACGT	4 cut(s)	173, 1096, 1287, 1511
HpyCH4V	TGCA	7 cut(s)	67, 89, 166, 932, 1121, 1557, 1595
HpyF10VI	GCNNNNNNNGC	6 cut(s)	244, 920, 929, 1041, 1127, 1546
HpyF3I	CTNAG	9 cut(s)	239, 353, 382, 1225, 1314, 1319, 1544, 1550, 1683
HpySE526I	ACGT	4 cut(s)	173, 1096, 1287, 1511
Hsp92II	CATG	8 cut(s)	43, 303, 375, 431, 898, 1015, 1024, 1051
HspAI	GCGC	5 cut(s)	5, 7, 247, 655, 1628
Ksp22I	TGATCA	2 cut(s)	984, 1077
KspAI	GTTAAC	1 cut(s)	177
Kzo9I	GATC	7 cut(s)	42, 520, 559, 984, 1077, 1408, 1573
LmnI	GCTCC	7 cut(s)	383, 432, 821, 920, 1059, 1504, 1612
Lsp1109I	GCAGC	5 cut(s)	34, 73, 944, 1038, 1527
MaeI	CTAG	4 cut(s)	261, 512, 1209, 1674
MaeII	ACGT	4 cut(s)	173, 1096, 1287, 1511
MaeIII	GTNAC	5 cut(s)	335, 992, 1268, 1384, 1512
MalI	GATC	7 cut(s)	44, 522, 561, 986, 1079, 1410, 1575
MbiI	CCGCTC	1 cut(s)	435
MboI	GATC	7 cut(s)	42, 520, 559, 984, 1077, 1408, 1573
MboII	GAAGA	5 cut(s)	49, 594, 597, 751, 987
MhlI	GDGCHC	7 cut(s)	234, 380, 442, 836, 968, 1143, 1191
MlsI	TGGCCA	1 cut(s)	1401
MluCI	AATT	7 cut(s)	34, 272, 447, 602, 1203, 1367, 1668
MluNI	TGGCCA	1 cut(s)	1401
MlyI	GAGTC	3 cut(s)	287, 597, 743
MmeI	TCCRAC	2 cut(s)	1091, 1581
Mox20I	TGGCCA	1 cut(s)	1401
Mph1103I	ATGCAT	1 cut(s)	168
MroXI	GAANNNNTTC	1 cut(s)	1129
MscI	TGGCCA	1 cut(s)	1401
MseI	TTAA	1 cut(s)	176
MslI	CAYNNNNRTG	2 cut(s)	152, 1382
Msp20I	TGGCCA	1 cut(s)	1401
MspA1I	CMGCKG	1 cut(s)	1634
MspI	CCGG	6 cut(s)	235, 420, 807, 1026, 1065, 1263
MspR9I	CCNGG	3 cut(s)	807, 820, 1026
MvaI	CCWGG	1 cut(s)	820
MvnI	CGCG	2 cut(s)	7, 502
MwoI	GCNNNNNNNGC	6 cut(s)	244, 920, 929, 1041, 1127, 1546
NciI	CCSGG	2 cut(s)	807, 1026
NdeI	CATATG	1 cut(s)	168
NdeII	GATC	7 cut(s)	42, 520, 559, 984, 1077, 1408, 1573
NlaIII	CATG	8 cut(s)	43, 303, 375, 431, 898, 1015, 1024, 1051
NlaIV	GGNNCC	5 cut(s)	100, 233, 388, 817, 1608
NmeAIII	GCCGAG	1 cut(s)	1494
NmuCI	GTSAC	2 cut(s)	1384, 1512
NsbI	TGCGCA	1 cut(s)	656
NsiI	ATGCAT	1 cut(s)	168
NspI	RCATGY	2 cut(s)	1024, 1051
NspV	TTCGAA	1 cut(s)	1293
OliI	CACNNNNGTG	2 cut(s)	152, 1382
PaeR7I	CTCGAG	1 cut(s)	1136
PalAI	GGCGCGCC	1 cut(s)	5
PauI	GCGCGC	1 cut(s)	5
PcsI	WCGNNNNNNNCGW	1 cut(s)	1517
PdmI	GAANNNNTTC	1 cut(s)	1129
PfeI	GAWTC	4 cut(s)	497, 754, 1531, 1696
PfoI	TCCNGGA	1 cut(s)	818
PinAI	ACCGGT	1 cut(s)	419
PkrI	GCNGC	8 cut(s)	11, 49, 88, 504, 913, 934, 1053, 1542
PleI	GAGTC	3 cut(s)	287, 596, 743
PpsI	GAGTC	3 cut(s)	287, 596, 743
PpuMI	RGGWCCY	1 cut(s)	99
Psp124BI	GAGCTC	2 cut(s)	836, 968
Psp5II	RGGWCCY	1 cut(s)	99
Psp6I	CCWGG	1 cut(s)	818
PspEI	GGTNACC	1 cut(s)	1268
PspGI	CCWGG	1 cut(s)	818
PspN4I	GGNNCC	5 cut(s)	100, 233, 388, 817, 1608
PspPI	GGNCC	3 cut(s)	99, 221, 1028
PspPPI	RGGWCCY	1 cut(s)	99
PspXI	VCTCGAGB	1 cut(s)	1136
PsrI	GAACNNNNNNTAC	2 cut(s)	250, 282
PstI	CTGCAG	1 cut(s)	91
PstNI	CAGNNNCTG	1 cut(s)	1540
PteI	GCGCGC	1 cut(s)	5
PvuII	CAGCTG	1 cut(s)	1634
RsaI	GTAC	3 cut(s)	82, 268, 1286
RsaNI	GTAC	3 cut(s)	81, 267, 1285
RseI	CAYNNNNRTG	2 cut(s)	152, 1382
SacI	GAGCTC	2 cut(s)	836, 968
SalI	GTCGAC	1 cut(s)	1195
SaqAI	TTAA	1 cut(s)	176
SatI	GCNGC	8 cut(s)	10, 48, 87, 503, 912, 933, 1052, 1541
Sau3AI	GATC	7 cut(s)	42, 520, 559, 984, 1077, 1408, 1573
Sau96I	GGNCC	3 cut(s)	99, 221, 1028
SchI	GAGTC	3 cut(s)	287, 597, 743
ScrFI	CCNGG	3 cut(s)	807, 820, 1026
SduI	GDGCHC	7 cut(s)	234, 380, 442, 836, 968, 1143, 1191
SfcI	CTRYAG	2 cut(s)	87, 1700
Sfr274I	CTCGAG	1 cut(s)	1136
SfuI	TTCGAA	1 cut(s)	1293
SgsI	GGCGCGCC	1 cut(s)	5
SinI	GGWCC	2 cut(s)	99, 1028
SlaI	CTCGAG	1 cut(s)	1136
SmiMI	CAYNNNNRTG	2 cut(s)	152, 1382
SmlI	CTYRAG	4 cut(s)	394, 441, 1136, 1190
SmoI	CTYRAG	4 cut(s)	394, 441, 1136, 1190
Sse9I	AATT	7 cut(s)	34, 272, 447, 602, 1203, 1367, 1668
SsiI	CCGC	8 cut(s)	10, 277, 435, 502, 887, 911, 1478, 1502
SspMI	CTAG	4 cut(s)	261, 512, 1209, 1674
SstI	GAGCTC	2 cut(s)	836, 968
StyD4I	CCNGG	3 cut(s)	805, 818, 1024
TaaI	ACNGT	5 cut(s)	193, 929, 1168, 1654, 1664
TaiI	ACGT	4 cut(s)	176, 1099, 1290, 1514
TaqI	TCGA	8 cut(s)	104, 451, 752, 1137, 1196, 1293, 1520, 1526
TaqII	GACCGA	1 cut(s)	835
TasI	AATT	7 cut(s)	34, 272, 447, 602, 1203, 1367, 1668
TatI	WGTACW	2 cut(s)	80, 266
TauI	GCSGC	3 cut(s)	12, 505, 914
TfiI	GAWTC	4 cut(s)	497, 754, 1531, 1696
Tru1I	TTAA	1 cut(s)	176
Tru9I	TTAA	1 cut(s)	176
TscAI	CASTG	9 cut(s)	131, 154, 370, 922, 934, 1191, 1495, 1602, 1691
TseFI	GTSAC	2 cut(s)	1384, 1512
TseI	GCWGC	5 cut(s)	47, 86, 932, 1051, 1540
Tsp45I	GTSAC	2 cut(s)	1384, 1512
TspDTI	ATGAA	4 cut(s)	615, 642, 721, 1544
TspGWI	ACGGA	2 cut(s)	123, 1612
TspRI	CASTG	9 cut(s)	131, 154, 370, 922, 934, 1191, 1495, 1602, 1691
VpaK11BI	GGWCC	2 cut(s)	99, 1028
XapI	RAATTY	4 cut(s)	447, 602, 1203, 1668
XbaI	TCTAGA	1 cut(s)	1208
XceI	RCATGY	2 cut(s)	1024, 1051
XhoI	CTCGAG	1 cut(s)	1136
XmiI	GTMKAC	2 cut(s)	541, 1196
XmnI	GAANNNNTTC	1 cut(s)	1129
XspI	CTAG	4 cut(s)	261, 512, 1209, 1674
Zsp2I	ATGCAT	1 cut(s)	168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.