Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0000761

Physical Location & Seq

Genomic Coordinates Forward (+)

89633156 .. 89637686

Gene Structure 4531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG674700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1458 bp

ATGGGTGGCAGGAGTTCAAAAGAGGATAGGAGTTTGAGGCAGAATAGTTATGGGTCCAGGTCGTCGTCTTCTTCTTGGAGTGGATATCCTCCAGTTCAATCACCATATGTAGAAAGTCAGGGGTATGCACCTCAGCAATCCTATCCTCCATCACAGTATTCATATCCGCCGCCGCCGCAGGATTATGGTCAAGAAACTCAGGCTTATTATCCACCCCAGCAGCCATCCTATCCATCATCATCACAGTATTCCAATCCCCCGCAGCCGCCGCCACCGGATTATGGGGGGCAAAGGAAGCTGGACAGGAGATATTCGAGAATTGCTGACAGTTACAATTCCCTCGAGGAGGTGACTGAGGCTCTTGCACGTGCTGGACTTGAGTCTTCGAATCTAATAGTCGGTATTGATTTCACAAAGAGCAATGAGTGGACAGGCAAGAACTCGTATAACAGAAGAAGCTTGCATCACATTGGGGATGGTCTAAATCCCTATGAACATGCAATTACCATTATTGGAAAAACCTTGGCTGCTTTTGATGAGGATAACATGATTCCGTGTTATGGTTTTGGAGATGCAACAACCCATGATCAAGATGTTTTTAGTTTCTACCCAAACGATCAACATTGCAATGGGTTTGAGGAAGTATTGACTCGCTACAAGGAAATTGTTCCTCATCTTCGCCTTGCAGGACCGACTTCATTTGCACCTGTAATTGAAATGGCCATGACTATTGTTGAGCAGAGTGGTGGCCAATACCATGTCCTATTGATAATTGCAGATGGCCAGGTAACTAGAAGTGTTGATACTGAGCGTGGCAGGCTAAGTCCACAGGAACAGAAGACAGTTGATGCAATTGTTGAAGCAAGCAAGTTCCCTCTATCAATTATATTGGTTGGTGTTGGAGATGGACCCTGGGACATGATGAAAGAGTTTGATGACAACATTCCTGCTCGGGCCTTTGATAATTTCCAATTTGTGAACTTTACGGAAATTATGTCAAAGAAATTGTCATCTTTGCGAAAGGAGACTGAATTTGCTCTAGCAGCATTGATGGAAATTCCGACTCAGTATAAAGCAACGATAGAGCTTAATCTCTTGGGTGGTCAGAAGGGCAATTCTCCCCACAGGGTTCCTCTCCCACCACCTCTCCATGGTGCATCTTTCAACAGTTCAAAACCTTTGTATGGTGCGTCATCCTTCAGCAGTTCGAAACCTTCTCATGAGCCCAGTGTTCCTCCTTATTATGAAGACAGCAGTTCTTTCAGTACAGCTTCAGCTCCACCAGCTCCACCTGCTTCCAGTTCTACTTATGATAATCAGGTCTGCCCCATCTGCCTTACAAATTCAAAAGACATGGCCTTTGGTTGTGGGCATCAGACGTGTTGCGAATGTGGGCAAGATCTTCAGACGTGCCCGATATGCCGAAGCCCAATCCAGACCAGAATAAAACTCTATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006464 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009308 GO:0009690 GO:0009850 GO:0009987 GO:0010817 GO:0016020 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0032446 GO:0034754 GO:0036211 GO:0042445 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0048519 GO:0048583 GO:0048585 GO:0050789 GO:0065007 GO:0065008 GO:0070647 GO:0071704 GO:0071944 GO:0080134 GO:0080148 GO:0140096 GO:1901564 GO:2000070

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Copine zf-C3HC4_3

Protein Analysis

485

Amino Acids

53.54

Weight (kDa)

5.36

Isoelectric Point (pI)

63.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Copine	PF07002	153 - 366	4e-74	Copine
zf-C3HC4_3	PF13920	439 - 480	2.4e-08	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000761)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G01650 AT3G01650 AT5G14420 AT5G14420 AT5G14420 AT5G14420
fragaria_vesca	FvH4_5g06620 FvH4_5g06621 FvH4_5g06621 FvH4_5g06630 FvH4_6g51970 FvH4_6g51970 FvH4_6g51970 FvH4_6g51970 FvH4_6g51970 FvH4_6g51970
malus_domestica	MD06G1162400.v1.1 MD09G1021400.v1.1 MD10G1071300.v1.1 MD14G1168100.v1.1 MD14G1168200.v1.1 MD17G1021400.v1.1
prunus_persica	Prupe.3G295000_v2.0.a1 Prupe.5G163000_v2.0.a1 Prupe.5G163100_v2.0.a1 Prupe.5G163100_v2.0.a1
pyrus_communis	pycom06g14510 pycom111g01780 pycom14g14020 pycom17g01850
rosa_chinensis	RchiOBHm_Chr2g0173441 RchiOBHm_Chr7g0192061 RchiOBHm_Chr7g0192071 RchiOBHm_Chr7g0192081
rosa_laevigata	RLG00000004403 RLG00000004404 RLG00000022190
rosa_multiflora	Rmu_sc0015463.1_g000001 Rmu_sc0019120.1_g000001 Rmu_ssc0000421.1_g000038 Rmu_ssc0000421.1_g000042 Rmu_ssc0000421.1_g000043
rosa_roxburghii	Rroxscaffold_2G00078850 Rroxscaffold_3G00263310 Rroxscaffold_3G00263320
rosa_rugosa	Rorug02G0570400 Rorug02G0570400 Rorug02G0570400 Rorug02G0570500 Rorug02G0570600 Rorug06G0512900 Rorug06G0513000 Rorug06G0513000 Rorug06G0513100 Rorug06G0513200
rosa_samantha	Rh2AG648900 Rh2BG659500 Rh2CG624800 Rh2DG674700 Rh7AG123300 Rh7BG124800 Rh7BG125000 Rh7CG127600 Rh7DG126600
rosa_wichuraiana	Rw0G003640 Rw0G003650 Rw2G053270 Rw7G010490 Rw7G010500 Rw7G010510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1300
AbsI	CCTCGAGG	1 cut(s)	341
Acc36I	ACCTGC	1 cut(s)	1300
AciI	CCGC	7 cut(s)	167, 170, 173, 176, 260, 266, 269
AcoI	YGGCCR	3 cut(s)	720, 748, 781
AcsI	RAATTY	3 cut(s)	1031, 1056, 1342
AcuI	CTGAAG	3 cut(s)	1183, 1257, 1388
AcvI	CACGTG	1 cut(s)	368
AfaI	GTAC	1 cut(s)	1267
AfiI	CCNNNNNNNGG	5 cut(s)	281, 346, 560, 1151, 1184
AflIII	ACRYGT	1 cut(s)	1379
AgsI	TTSAA	7 cut(s)	18, 98, 716, 860, 1165, 1173, 1347
AjiI	CACGTC	2 cut(s)	1380, 1410
AjnI	CCWGG	3 cut(s)	56, 783, 911
AluBI	AGCT	6 cut(s)	298, 459, 1087, 1271, 1277, 1286
AluI	AGCT	6 cut(s)	298, 459, 1087, 1271, 1277, 1286
Alw26I	GTCTC	1 cut(s)	1019
Ama87I	CYCGRG	2 cut(s)	341, 951
AoxI	GGCC	5 cut(s)	720, 748, 781, 954, 1356
ApeKI	GCWGC	4 cut(s)	220, 262, 527, 1043
ApoI	RAATTY	3 cut(s)	1031, 1056, 1342
ArsI	GACNNNNNNTTYG	4 cut(s)	992, 1024, 1343, 1375
Asp700I	GAANNNNTTC	1 cut(s)	666
AspS9I	GGNCC	4 cut(s)	54, 689, 908, 954
AsuHPI	GGTGA	2 cut(s)	93, 361
AsuII	TTCGAA	2 cut(s)	386, 1208
AvaI	CYCGRG	2 cut(s)	341, 951
AvaII	GGWCC	3 cut(s)	54, 689, 908
BaeGI	GKGCMC	1 cut(s)	1415
BalI	TGGCCA	3 cut(s)	722, 750, 783
BanII	GRGCYC	1 cut(s)	1227
BarI	GAAGNNNNNNTAC	2 cut(s)	787, 819
BbrPI	CACGTG	1 cut(s)	368
BbsI	GAAGAC	4 cut(s)	60, 375, 845, 1254
BbvCI	CCTCAGC	1 cut(s)	132
BbvI	GCAGC	4 cut(s)	232, 274, 514, 1055
BccI	CCATC	8 cut(s)	157, 232, 241, 470, 773, 899, 1045, 1337
BciT130I	CCWGG	3 cut(s)	58, 785, 913
BclI	TGATCA	1 cut(s)	586
BcoDI	GTCTC	1 cut(s)	1019
BfaI	CTAG	2 cut(s)	792, 1040
BfuAI	ACCTGC	1 cut(s)	1300
BglII	AGATCT	1 cut(s)	1399
BisI	GCNGC	9 cut(s)	170, 173, 176, 221, 263, 266, 269, 528, 1044
BlsI	GCNGC	9 cut(s)	171, 174, 177, 222, 264, 267, 270, 529, 1045
Bme1390I	CCNGG	3 cut(s)	58, 785, 913
Bme18I	GGWCC	3 cut(s)	54, 689, 908
BmeT110I	CYCGRG	2 cut(s)	341, 951
BmgBI	CACGTC	2 cut(s)	1380, 1410
BmgT120I	GGNCC	4 cut(s)	54, 689, 908, 954
BmiI	GGNNCC	3 cut(s)	55, 910, 1131
BmrFI	CCNGG	3 cut(s)	58, 785, 913
BmrI	ACTGGG	1 cut(s)	1221
BmsI	GCATC	5 cut(s)	472, 562, 838, 1166, 1381
BmuI	ACTGGG	1 cut(s)	1221
BoxI	GACNNNNGTC	1 cut(s)	379
BpiI	GAAGAC	4 cut(s)	60, 375, 845, 1254
BpmI	CTGGAG	1 cut(s)	75
Bpu10I	CCTNAGC	1 cut(s)	132
Bpu14I	TTCGAA	2 cut(s)	386, 1208
BpuEI	CTTGAG	1 cut(s)	398
BsaAI	YACGTR	1 cut(s)	368
BsaJI	CCNNGG	4 cut(s)	522, 911, 912, 1150
BsaWI	WCCGGW	1 cut(s)	274
BsaXI	ACNNNNNCTCC	2 cut(s)	1131, 1161
Bsc4I	CCNNNNNNNGG	5 cut(s)	281, 346, 560, 1151, 1184
Bse1I	ACTGG	3 cut(s)	92, 1227, 1299
Bse3DI	GCAATG	3 cut(s)	427, 622, 634
BseBI	CCWGG	3 cut(s)	58, 785, 913
BseDI	CCNNGG	4 cut(s)	522, 911, 912, 1150
BseGI	GGATG	3 cut(s)	224, 481, 1193
BseLI	CCNNNNNNNGG	5 cut(s)	281, 346, 560, 1151, 1184
BseMI	GCAATG	3 cut(s)	427, 622, 634
BseMII	CTCAG	5 cut(s)	146, 212, 345, 798, 1079
BseNI	ACTGG	3 cut(s)	92, 1227, 1299
BseRI	GAGGAG	1 cut(s)	359
BseSI	GKGCMC	1 cut(s)	1415
BseXI	GCAGC	4 cut(s)	232, 274, 514, 1055
BseYI	CCCAGC	1 cut(s)	216
BshFI	GGCC	5 cut(s)	722, 750, 783, 956, 1358
BsiHKCI	CYCGRG	2 cut(s)	341, 951
BsiSI	CCGG	1 cut(s)	275
BslFI	GGGAC	1 cut(s)	929
BslI	CCNNNNNNNGG	5 cut(s)	281, 346, 560, 1151, 1184
BsmAI	GTCTC	1 cut(s)	1019
BsmFI	GGGAC	1 cut(s)	929
BsnI	GGCC	5 cut(s)	722, 750, 783, 956, 1358
BsoBI	CYCGRG	2 cut(s)	341, 951
Bsp119I	TTCGAA	2 cut(s)	386, 1208
Bsp1286I	GDGCHC	2 cut(s)	1227, 1415
Bsp143I	GATC	3 cut(s)	586, 616, 1399
Bsp19I	CCATGG	1 cut(s)	1150
BspACI	CCGC	7 cut(s)	167, 170, 173, 176, 260, 266, 269
BspANI	GGCC	5 cut(s)	722, 750, 783, 956, 1358
BspCNI	CTCAG	5 cut(s)	145, 211, 346, 799, 1078
BspHI	TCATGA	1 cut(s)	1219
BspLI	GGNNCC	3 cut(s)	55, 910, 1131
BspMI	ACCTGC	1 cut(s)	1300
BspT104I	TTCGAA	2 cut(s)	386, 1208
BsrDI	GCAATG	3 cut(s)	427, 622, 634
BsrI	ACTGG	3 cut(s)	92, 1227, 1299
BssECI	CCNNGG	4 cut(s)	522, 911, 912, 1150
BssMI	GATC	3 cut(s)	586, 616, 1399
BssT1I	CCWWGG	2 cut(s)	522, 1150
Bst2UI	CCWGG	3 cut(s)	58, 785, 913
Bst4CI	ACNGT	5 cut(s)	156, 246, 329, 844, 1169
BstBAI	YACGTR	1 cut(s)	368
BstBI	TTCGAA	2 cut(s)	386, 1208
BstC8I	GCNNGC	3 cut(s)	461, 818, 865
BstDEI	CTNAG	6 cut(s)	132, 198, 354, 807, 821, 1065
BstDSI	CCRYGG	1 cut(s)	1150
BstENI	CCTNNNNNAGG	1 cut(s)	344
BstF5I	GGATG	3 cut(s)	224, 481, 1193
BstKTI	GATC	3 cut(s)	589, 619, 1402
BstMAI	GTCTC	1 cut(s)	1019
BstMBI	GATC	3 cut(s)	586, 616, 1399
BstMWI	GCNNNNNNNGC	9 cut(s)	175, 268, 295, 817, 1043, 1283, 1292, 1332, 1419
BstNI	CCWGG	3 cut(s)	58, 785, 913
BstNSI	RCATGY	1 cut(s)	500
BstPAI	GACNNNNGTC	1 cut(s)	379
BstSCI	CCNGG	3 cut(s)	56, 783, 911
BstSLI	GKGCMC	1 cut(s)	1415
BstV1I	GCAGC	4 cut(s)	232, 274, 514, 1055
BstV2I	GAAGAC	4 cut(s)	60, 375, 845, 1254
BstX2I	RGATCY	1 cut(s)	1399
BstYI	RGATCY	1 cut(s)	1399
BsuRI	GGCC	5 cut(s)	722, 750, 783, 956, 1358
BtgI	CCRYGG	1 cut(s)	1150
BtrI	CACGTC	2 cut(s)	1380, 1410
BtsCI	GGATG	3 cut(s)	224, 481, 1193
BtsIMutI	CAGTG	1 cut(s)	1234
BveI	ACCTGC	1 cut(s)	1300
Cac8I	GCNNGC	3 cut(s)	461, 818, 865
CciI	TCATGA	1 cut(s)	1219
Cfr13I	GGNCC	4 cut(s)	54, 689, 908, 954
CseI	GACGC	1 cut(s)	1179
Csp6I	GTAC	1 cut(s)	1266
CviAII	CATG	9 cut(s)	497, 547, 584, 724, 758, 919, 1151, 1220, 1354
CviQI	GTAC	1 cut(s)	1266
DdeI	CTNAG	6 cut(s)	132, 198, 354, 807, 821, 1065
DpnI	GATC	3 cut(s)	588, 618, 1401
DpnII	GATC	3 cut(s)	586, 616, 1399
EaeI	YGGCCR	3 cut(s)	720, 748, 781
EciI	GGCGGA	1 cut(s)	156
Eco130I	CCWWGG	2 cut(s)	522, 1150
Eco24I	GRGCYC	1 cut(s)	1227
Eco32I	GATATC	1 cut(s)	86
Eco47I	GGWCC	3 cut(s)	54, 689, 908
Eco57I	CTGAAG	3 cut(s)	1183, 1257, 1388
Eco72I	CACGTG	1 cut(s)	368
Eco88I	CYCGRG	2 cut(s)	341, 951
EcoNI	CCTNNNNNAGG	1 cut(s)	344
EcoRII	CCWGG	3 cut(s)	56, 783, 911
EcoRV	GATATC	1 cut(s)	86
EcoT14I	CCWWGG	2 cut(s)	522, 1150
EcoT38I	GRGCYC	1 cut(s)	1227
ErhI	CCWWGG	2 cut(s)	522, 1150
FaeI	CATG	9 cut(s)	500, 550, 587, 727, 761, 922, 1154, 1223, 1357
FaqI	GGGAC	1 cut(s)	929
FatI	CATG	9 cut(s)	496, 546, 583, 723, 757, 918, 1150, 1219, 1353
FauI	CCCGC	1 cut(s)	267
FauNDI	CATATG	1 cut(s)	106
FbaI	TGATCA	1 cut(s)	586
Fnu4HI	GCNGC	9 cut(s)	170, 173, 176, 221, 263, 266, 269, 528, 1044
FokI	GGATG	3 cut(s)	211, 488, 1180
FriOI	GRGCYC	1 cut(s)	1227
Fsp4HI	GCNGC	9 cut(s)	170, 173, 176, 221, 263, 266, 269, 528, 1044
FspBI	CTAG	2 cut(s)	792, 1040
GluI	GCNGC	9 cut(s)	170, 173, 176, 221, 263, 266, 269, 528, 1044
GsaI	CCCAGC	1 cut(s)	220
GsuI	CTGGAG	1 cut(s)	75
HaeIII	GGCC	5 cut(s)	722, 750, 783, 956, 1358
HapII	CCGG	1 cut(s)	275
HgaI	GACGC	1 cut(s)	1179
Hin1II	CATG	9 cut(s)	500, 550, 587, 727, 761, 922, 1154, 1223, 1357
HindIII	AAGCTT	1 cut(s)	457
HinfI	GANTC	5 cut(s)	380, 388, 550, 649, 1063
HpaII	CCGG	1 cut(s)	275
HphI	GGTGA	2 cut(s)	93, 361
Hpy166II	GTNNAC	3 cut(s)	429, 827, 979
Hpy188I	TCNGA	4 cut(s)	1062, 1107, 1377, 1407
Hpy188III	TCNNGA	5 cut(s)	191, 315, 590, 1220, 1435
Hpy8I	GTNNAC	3 cut(s)	429, 827, 979
Hpy99I	CGWCG	1 cut(s)	67
HpyAV	CCTTC	3 cut(s)	1102, 1207, 1224
HpyCH4III	ACNGT	5 cut(s)	156, 246, 329, 844, 1169
HpyCH4IV	ACGT	3 cut(s)	367, 1379, 1409
HpyF10VI	GCNNNNNNNGC	9 cut(s)	175, 268, 295, 817, 1043, 1283, 1292, 1332, 1419
HpyF3I	CTNAG	6 cut(s)	132, 198, 354, 807, 821, 1065
HpySE526I	ACGT	3 cut(s)	367, 1379, 1409
Hsp92II	CATG	9 cut(s)	500, 550, 587, 727, 761, 922, 1154, 1223, 1357
Ksp22I	TGATCA	1 cut(s)	586
Kzo9I	GATC	3 cut(s)	586, 616, 1399
LmnI	GCTCC	2 cut(s)	1282, 1291
Lsp1109I	GCAGC	4 cut(s)	232, 274, 514, 1055
LweI	GCATC	5 cut(s)	472, 562, 838, 1166, 1381
MaeI	CTAG	2 cut(s)	792, 1040
MaeII	ACGT	3 cut(s)	367, 1379, 1409
MaeIII	GTNAC	3 cut(s)	329, 349, 787
MalI	GATC	3 cut(s)	588, 618, 1401
MboI	GATC	3 cut(s)	586, 616, 1399
MboII	GAAGA	8 cut(s)	60, 63, 375, 465, 668, 850, 1259, 1394
MfeI	CAATTG	1 cut(s)	852
MflI	RGATCY	1 cut(s)	1399
MhlI	GDGCHC	2 cut(s)	1227, 1415
MlsI	TGGCCA	3 cut(s)	722, 750, 783
MluNI	TGGCCA	3 cut(s)	722, 750, 783
MlyI	GAGTC	3 cut(s)	389, 643, 1057
MmeI	TCCRAC	2 cut(s)	880, 1085
Mox20I	TGGCCA	3 cut(s)	722, 750, 783
MroXI	GAANNNNTTC	1 cut(s)	666
MscI	TGGCCA	3 cut(s)	722, 750, 783
MseI	TTAA	2 cut(s)	1089, 1456
MslI	CAYNNNNRTG	1 cut(s)	627
Msp20I	TGGCCA	3 cut(s)	722, 750, 783
MspI	CCGG	1 cut(s)	275
MspR9I	CCNGG	3 cut(s)	58, 785, 913
MunI	CAATTG	1 cut(s)	852
MvaI	CCWGG	3 cut(s)	58, 785, 913
MwoI	GCNNNNNNNGC	9 cut(s)	175, 268, 295, 817, 1043, 1283, 1292, 1332, 1419
NcoI	CCATGG	1 cut(s)	1150
NdeI	CATATG	1 cut(s)	106
NdeII	GATC	3 cut(s)	586, 616, 1399
NlaIII	CATG	9 cut(s)	500, 550, 587, 727, 761, 922, 1154, 1223, 1357
NlaIV	GGNNCC	3 cut(s)	55, 910, 1131
NmuCI	GTSAC	1 cut(s)	349
NspI	RCATGY	1 cut(s)	500
NspV	TTCGAA	2 cut(s)	386, 1208
PaeR7I	CTCGAG	1 cut(s)	341
PagI	TCATGA	1 cut(s)	1219
PaqCI	CACCTGC	1 cut(s)	1300
PasI	CCCWGGG	1 cut(s)	912
PdmI	GAANNNNTTC	1 cut(s)	666
PfeI	GAWTC	2 cut(s)	388, 550
PkrI	GCNGC	9 cut(s)	171, 174, 177, 222, 264, 267, 270, 529, 1045
PleI	GAGTC	3 cut(s)	388, 643, 1057
PmaCI	CACGTG	1 cut(s)	368
PmlI	CACGTG	1 cut(s)	368
PpsI	GAGTC	3 cut(s)	388, 643, 1057
Ppu21I	YACGTR	1 cut(s)	368
PshAI	GACNNNNGTC	1 cut(s)	379
Psp6I	CCWGG	3 cut(s)	56, 783, 911
PspCI	CACGTG	1 cut(s)	368
PspFI	CCCAGC	1 cut(s)	216
PspGI	CCWGG	3 cut(s)	56, 783, 911
PspN4I	GGNNCC	3 cut(s)	55, 910, 1131
PspPI	GGNCC	4 cut(s)	54, 689, 908, 954
PspXI	VCTCGAGB	1 cut(s)	341
PsuI	RGATCY	1 cut(s)	1399
RsaI	GTAC	1 cut(s)	1267
RsaNI	GTAC	1 cut(s)	1266
RseI	CAYNNNNRTG	1 cut(s)	627
SaqAI	TTAA	2 cut(s)	1089, 1456
SatI	GCNGC	9 cut(s)	170, 173, 176, 221, 263, 266, 269, 528, 1044
Sau3AI	GATC	3 cut(s)	586, 616, 1399
Sau96I	GGNCC	4 cut(s)	54, 689, 908, 954
SchI	GAGTC	3 cut(s)	389, 643, 1057
ScrFI	CCNGG	3 cut(s)	58, 785, 913
SduI	GDGCHC	2 cut(s)	1227, 1415
SfaNI	GCATC	5 cut(s)	472, 562, 838, 1166, 1381
Sfr274I	CTCGAG	1 cut(s)	341
SfuI	TTCGAA	2 cut(s)	386, 1208
SinI	GGWCC	3 cut(s)	54, 689, 908
SlaI	CTCGAG	1 cut(s)	341
SmiMI	CAYNNNNRTG	1 cut(s)	627
SmlI	CTYRAG	2 cut(s)	341, 377
SmoI	CTYRAG	2 cut(s)	341, 377
SsiI	CCGC	7 cut(s)	167, 170, 173, 176, 260, 266, 269
SspMI	CTAG	2 cut(s)	792, 1040
StyD4I	CCNGG	3 cut(s)	56, 783, 911
StyI	CCWWGG	2 cut(s)	522, 1150
TaaI	ACNGT	5 cut(s)	156, 246, 329, 844, 1169
TaiI	ACGT	3 cut(s)	370, 1382, 1412
TaqI	TCGA	4 cut(s)	314, 342, 386, 1208
TaqII	GACCGA	1 cut(s)	706
TatI	WGTACW	1 cut(s)	1265
TauI	GCSGC	5 cut(s)	172, 175, 178, 268, 271
TfiI	GAWTC	2 cut(s)	388, 550
Tru1I	TTAA	2 cut(s)	1089, 1456
Tru9I	TTAA	2 cut(s)	1089, 1456
TscAI	CASTG	1 cut(s)	1234
TseFI	GTSAC	1 cut(s)	349
TseI	GCWGC	4 cut(s)	220, 262, 527, 1043
Tsp45I	GTSAC	1 cut(s)	349
TspDTI	ATGAA	5 cut(s)	150, 507, 687, 938, 1260
TspGWI	ACGGA	2 cut(s)	543, 1001
TspRI	CASTG	1 cut(s)	1234
VpaK11BI	GGWCC	3 cut(s)	54, 689, 908
XagI	CCTNNNNNAGG	1 cut(s)	344
XapI	RAATTY	3 cut(s)	1031, 1056, 1342
XceI	RCATGY	1 cut(s)	500
XhoI	CTCGAG	1 cut(s)	341
XmnI	GAANNNNTTC	1 cut(s)	666
XspI	CTAG	2 cut(s)	792, 1040

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.