Rw7G010500

Domain of unknown function (DUF1929)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000761
Physical Location & Seq
Reverse (-)
9769671 .. 9771374
1704 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G010500.1

Sequence Viewer

Length: 1704 bp
ATGGCGCGCCGCAATCACTTCCTGATTGTAATCAATTCCATGATCGCTGCTTTGTTCTTCACATTGCACTGTATTGGATGTACTGCTGCAGTTAGGGGGTCCTCGAACGGAGATGGTGTAGGGCAGTGGCAACTGCTTCTGGACAACACTGAAGTGGTGGCAATGCATATGACGTTAACTCACCATAACACGGTCATTATCTTTGACCAAACAGAAGCAGGCCCTTCTGGGCACCGGCTTAGAAGGCGCTACAATGGAACTAGGTGTACTCAATTCCGCAATGACTTGGCAGACTCATCATGCTATGTTCACTCGGTTGAGTATGGCATTTCTGGTAACAAGTTGAGACCTCTGAGGCTTTCCACTGATACATGGTGCTCCTCAGGTTCCTTCTTGAGCAATGGGACACTTCTACAAACCGGTGGACACGGGAGCGGTGCTCAAGGAATTCGATACTTTAGTCCTTGTGGGGGAAATGATAACTGCGATTGGAGGGAATCGCGGCAATCACTAGCTGATGATCGTTGGTATGCTTCCAGTCTACTACTCCCAGAGGAGGATCGGGTTATTGTGGTAGGTGGAAGAAGAGTCTTTACTTATGAATTTATACCAAAGCAGTATTCCAATGAAGGCTCTTTTGACTTTCCATTCTTGCGCAACACACATCAAAGAAGGCAAGGAGGAAACAACCTCTATCCCTTCCTTCACATTTGTCCAGATGGCAGATTGTTCATATTTGCCAACCGAGACTCGATTCTCTTCAACTACAAAGAGAACAGGGTGGTCAAGCACTTCCCACGCATACCCGGAGATGGCTCCAGGAACTACCCGAGCTCTGGCTCGTCGGTCATCCTCCCTTTACATTACACAAACGGCTTTGAAAAGGCGGAGGTCATGGTGTGTGGTGGTGCGGCCAGTGGAGCTTACAGTGCAGCAGGAGATGGCAGGTTCTTGAAAGGTTTGACCTCTTGTGGAAGAATGGTGATCACGGGTAACAGACACAAGTGGAACATGGAGAACATGCCCGGTCCACGCCTCCTATGCGACATGCTGCTCCTCCCAACCGGAGATGTCCTGATCATCAACGGGGCTAAACGTGGTGCTGGAGGTTGGAACAATGCAAGAAATGCTTCACTCGAGCCTTACCTTTACCACCCAAACAAGACAGTAGGCAAAAGGTTTTCAGTGCTCAAGTCGACACGAATTCCTAGAATGTATCACTCCTCAGCCATTCTCTTACCTGATGGGAGGGTTTTAGTTGCCGGTGGTAACCCTCACAATAGGTACGTTTTCGAAAATGTGGCATACCCAACTGAGCTTAGGCTACAAGCATTTGTTCCAGACTATATGGGTAGTCAGCACCATCAATTTAGACCTACTAATGTGACCATACACTATGGCCATAATAATTTTTATGGTGTGAGGTATGGAGGAGAGTTCAATGTGAGCTTTAGGTTGGCGAGTAAGGTGAGCAATGCGGTGGAGTTCAGTGCTTATGCTCCGCCATTCACGTCACACTCGATATCGATGAATCAGAGGCTGCTGAGGCTGAGGTGCAAGAGTTTGGTGCGGGGTCAAGATGGATGGGTAGGTGCAGTGTTGGAGGCTCCTCCCTCTCCTTCGGTTGCGCCAGCTGGTTATTACTTGCTTACTGTTTTGAACGGTGGAATTCCTAGTCTGTCTCAGTGGATTAGGATCCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1929 Glyoxal_oxid_N

Protein Analysis

567

Amino Acids

63.06

Weight (kDa)

9.54

Isoelectric Point (pI)

46.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxal_oxid_N PF07250 55 - 449 7.8e-168 Glyoxal oxidase N-terminus
GO-like_E_set PF09118 470 - 566 2.1e-21 Galactose oxidase-like, Early set domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 656
Acc36I ACCTGC 1 cut(s) 936
AccB1I GGYRCC 1 cut(s) 231
AccBSI CCGCTC 1 cut(s) 435
AccI GTMKAC 2 cut(s) 541, 1196
AccII CGCG 2 cut(s) 7, 502
AciI CCGC 9 cut(s) 10, 277, 435, 502, 887, 911, 1478, 1502, 1570
AclWI GGATC 3 cut(s) 567, 1690, 1703
AcoI YGGCCR 2 cut(s) 912, 1399
AcsI RAATTY 4 cut(s) 447, 602, 1203, 1668
AcuI CTGAAG 1 cut(s) 171
AfaI GTAC 3 cut(s) 82, 268, 1286
AfiI CCNNNNNNNGG 5 cut(s) 190, 470, 556, 812, 836
AgeI ACCGGT 1 cut(s) 419
AgsI TTSAA 5 cut(s) 763, 881, 955, 1441, 1660
AjiI CACGTC 1 cut(s) 1512
AjnI CCWGG 1 cut(s) 818
AjuI GAANNNNNNNTTGG 2 cut(s) 604, 636
AleI CACNNNNGTG 1 cut(s) 152
AluBI AGCT 6 cut(s) 515, 834, 923, 1318, 1449, 1634
AluI AGCT 6 cut(s) 515, 834, 923, 1318, 1449, 1634
Alw21I GWGCWC 4 cut(s) 380, 442, 836, 1191
Alw26I GTCTC 3 cut(s) 340, 741, 1686
AlwI GGATC 3 cut(s) 567, 1690, 1703
AlwNI CAGNNNCTG 1 cut(s) 1540
Ama87I CYCGRG 2 cut(s) 829, 1136
AoxI GGCC 3 cut(s) 220, 912, 1399
ApeKI GCWGC 5 cut(s) 47, 86, 932, 1051, 1540
ApoI RAATTY 4 cut(s) 447, 602, 1203, 1668
AscI GGCGCGCC 1 cut(s) 5
AsiGI ACCGGT 1 cut(s) 419
Asp700I GAANNNNTTC 1 cut(s) 1129
AspLEI GCGC 5 cut(s) 7, 9, 249, 657, 1630
AspS9I GGNCC 3 cut(s) 99, 221, 1028
AsuC2I CCSGG 2 cut(s) 807, 1026
AsuHPI GGTGA 3 cut(s) 173, 994, 1480
AsuII TTCGAA 1 cut(s) 1293
AvaI CYCGRG 2 cut(s) 829, 1136
AvaII GGWCC 2 cut(s) 99, 1028
AxyI CCTNAGG 1 cut(s) 382
BaeGI GKGCMC 1 cut(s) 234
BaeI ACNNNNGTAYC 2 cut(s) 445, 478
BalI TGGCCA 1 cut(s) 1401
BamHI GGATCC 1 cut(s) 1695
BanI GGYRCC 1 cut(s) 231
BanII GRGCYC 1 cut(s) 836
BarI GAAGNNNNNNTAC 2 cut(s) 577, 609
Bbv12I GWGCWC 4 cut(s) 380, 442, 836, 1191
BbvCI CCTCAGC 3 cut(s) 1225, 1544, 1550
BbvI GCAGC 5 cut(s) 34, 73, 944, 1038, 1527
BccI CCATC 8 cut(s) 107, 713, 806, 935, 1238, 1371, 1574, 1578
BceAI ACGGC 1 cut(s) 889
BciT130I CCWGG 1 cut(s) 820
BclI TGATCA 2 cut(s) 984, 1077
BcnI CCSGG 2 cut(s) 807, 1026
BcoDI GTCTC 3 cut(s) 340, 741, 1686
BfaI CTAG 4 cut(s) 261, 512, 1209, 1674
BfmI CTRYAG 2 cut(s) 87, 1700
BfoI RGCGCY 1 cut(s) 250
BfuAI ACCTGC 1 cut(s) 936
BisI GCNGC 8 cut(s) 10, 48, 87, 503, 912, 933, 1052, 1541
BlsI GCNGC 8 cut(s) 11, 49, 88, 504, 913, 934, 1053, 1542
Bme1390I CCNGG 3 cut(s) 807, 820, 1026
Bme18I GGWCC 2 cut(s) 99, 1028
BmeT110I CYCGRG 2 cut(s) 829, 1136
BmgBI CACGTC 1 cut(s) 1512
BmgT120I GGNCC 3 cut(s) 99, 221, 1028
BmiI GGNNCC 6 cut(s) 100, 233, 388, 817, 1608, 1697
BmrFI CCNGG 3 cut(s) 807, 820, 1026
BplI GAGNNNNNCTC 2 cut(s) 424, 456
BpmI CTGGAG 2 cut(s) 802, 1125
Bpu10I CCTNAGC 4 cut(s) 1225, 1319, 1544, 1550
Bpu14I TTCGAA 1 cut(s) 1293
BpuEI CTTGAG 3 cut(s) 415, 426, 1175
BpuMI CCSGG 2 cut(s) 807, 1026
Bsa29I ATCGAT 1 cut(s) 1526
BsaBI GATNNNNATC 2 cut(s) 29, 1694
BsaI GGTCTC 1 cut(s) 340
BsaWI WCCGGW 2 cut(s) 419, 1064
BsaXI ACNNNNNCTCC 2 cut(s) 102, 132
Bsc4I CCNNNNNNNGG 5 cut(s) 190, 470, 556, 812, 836
Bse118I RCCGGY 3 cut(s) 234, 419, 1262
Bse1I ACTGG 2 cut(s) 537, 915
Bse21I CCTNAGG 1 cut(s) 382
Bse3DI GCAATG 5 cut(s) 62, 168, 286, 406, 1480
Bse8I GATNNNNATC 2 cut(s) 29, 1694
BseBI CCWGG 1 cut(s) 820
BseCI ATCGAT 1 cut(s) 1526
BseGI GGATG 3 cut(s) 83, 849, 1589
BseJI GATNNNNATC 2 cut(s) 29, 1694
BseLI CCNNNNNNNGG 5 cut(s) 190, 470, 556, 812, 836
BseMI GCAATG 5 cut(s) 62, 168, 286, 406, 1480
BseMII CTCAG 7 cut(s) 344, 396, 1239, 1305, 1535, 1541, 1697
BseNI ACTGG 2 cut(s) 537, 915
BsePI GCGCGC 1 cut(s) 5
BseRI GAGGAG 6 cut(s) 370, 569, 1046, 1213, 1446, 1599
BseSI GKGCMC 1 cut(s) 234
BseXI GCAGC 5 cut(s) 34, 73, 944, 1038, 1527
BsgI GTGCAG 2 cut(s) 951, 1614
Bsh1236I CGCG 2 cut(s) 7, 502
BshFI GGCC 3 cut(s) 222, 914, 1401
BshNI GGYRCC 1 cut(s) 231
BshTI ACCGGT 1 cut(s) 419
BshVI ATCGAT 1 cut(s) 1526
BsiHKAI GWGCWC 4 cut(s) 380, 442, 836, 1191
BsiHKCI CYCGRG 2 cut(s) 829, 1136
BsiSI CCGG 6 cut(s) 235, 420, 807, 1026, 1065, 1263
BslFI GGGAC 1 cut(s) 418
BslI CCNNNNNNNGG 5 cut(s) 190, 470, 556, 812, 836
BsmAI GTCTC 3 cut(s) 340, 741, 1686
BsmFI GGGAC 1 cut(s) 418
BsnI GGCC 3 cut(s) 222, 914, 1401
Bso31I GGTCTC 1 cut(s) 340
BsoBI CYCGRG 2 cut(s) 829, 1136
Bsp119I TTCGAA 1 cut(s) 1293
Bsp1286I GDGCHC 5 cut(s) 234, 380, 442, 836, 1191
Bsp143I GATC 6 cut(s) 42, 520, 559, 984, 1077, 1695
BspACI CCGC 9 cut(s) 10, 277, 435, 502, 887, 911, 1478, 1502, 1570
BspANI GGCC 3 cut(s) 222, 914, 1401
BspCNI CTCAG 7 cut(s) 345, 395, 1238, 1306, 1536, 1542, 1696
BspDI ATCGAT 1 cut(s) 1526
BspFNI CGCG 2 cut(s) 7, 502
BspLI GGNNCC 6 cut(s) 100, 233, 388, 817, 1608, 1697
BspMAI CTGCAG 1 cut(s) 91
BspMI ACCTGC 1 cut(s) 936
BspPI GGATC 3 cut(s) 567, 1690, 1703
BspT104I TTCGAA 1 cut(s) 1293
BspT107I GGYRCC 1 cut(s) 231
BspTNI GGTCTC 1 cut(s) 340
BsrBI CCGCTC 1 cut(s) 435
BsrDI GCAATG 5 cut(s) 62, 168, 286, 406, 1480
BsrFI RCCGGY 3 cut(s) 234, 419, 1262
BsrI ACTGG 2 cut(s) 537, 915
BssAI RCCGGY 3 cut(s) 234, 419, 1262
BssHII GCGCGC 1 cut(s) 5
BssMI GATC 6 cut(s) 42, 520, 559, 984, 1077, 1695
Bst2UI CCWGG 1 cut(s) 820
Bst4CI ACNGT 6 cut(s) 71, 193, 929, 1168, 1654, 1664
Bst6I CTCTTC 2 cut(s) 580, 764
BstAPI GCANNNNNTGC 1 cut(s) 1127
BstBI TTCGAA 1 cut(s) 1293
BstC8I GCNNGC 3 cut(s) 7, 220, 1632
BstDEI CTNAG 9 cut(s) 239, 353, 382, 1225, 1314, 1319, 1544, 1550, 1683
BstEII GGTNACC 1 cut(s) 1268
BstF5I GGATG 3 cut(s) 83, 849, 1589
BstFNI CGCG 2 cut(s) 7, 502
BstH2I RGCGCY 1 cut(s) 250
BstHHI GCGC 5 cut(s) 7, 9, 249, 657, 1630
BstKTI GATC 6 cut(s) 45, 523, 562, 987, 1080, 1698
BstMAI GTCTC 3 cut(s) 340, 741, 1686
BstMBI GATC 6 cut(s) 42, 520, 559, 984, 1077, 1695
BstMWI GCNNNNNNNGC 6 cut(s) 244, 920, 929, 1041, 1127, 1546
BstNI CCWGG 1 cut(s) 820
BstNSI RCATGY 2 cut(s) 1024, 1051
BstPI GGTNACC 1 cut(s) 1268
BstSCI CCNGG 3 cut(s) 805, 818, 1024
BstSFI CTRYAG 2 cut(s) 87, 1700
BstSLI GKGCMC 1 cut(s) 234
BstUI CGCG 2 cut(s) 7, 502
BstV1I GCAGC 5 cut(s) 34, 73, 944, 1038, 1527
BstX2I RGATCY 1 cut(s) 1695
BstYI RGATCY 1 cut(s) 1695
Bsu15I ATCGAT 1 cut(s) 1526
Bsu36I CCTNAGG 1 cut(s) 382
BsuRI GGCC 3 cut(s) 222, 914, 1401
BsuTUI ATCGAT 1 cut(s) 1526
BtrI CACGTC 1 cut(s) 1512
BtsCI GGATG 3 cut(s) 83, 849, 1589
BtsI GCAGTG 2 cut(s) 131, 1602
BveI ACCTGC 1 cut(s) 936
Cac8I GCNNGC 3 cut(s) 7, 220, 1632
CaiI CAGNNNCTG 1 cut(s) 1540
CfoI GCGC 5 cut(s) 7, 9, 249, 657, 1630
Cfr10I RCCGGY 3 cut(s) 234, 419, 1262
Cfr13I GGNCC 3 cut(s) 99, 221, 1028
ClaI ATCGAT 1 cut(s) 1526
Csp6I GTAC 3 cut(s) 81, 267, 1285
CspAI ACCGGT 1 cut(s) 419
CviAII CATG 7 cut(s) 40, 300, 372, 895, 1012, 1021, 1048
CviQI GTAC 3 cut(s) 81, 267, 1285
DdeI CTNAG 9 cut(s) 239, 353, 382, 1225, 1314, 1319, 1544, 1550, 1683
DpnI GATC 6 cut(s) 44, 522, 561, 986, 1079, 1697
DpnII GATC 6 cut(s) 42, 520, 559, 984, 1077, 1695
EaeI YGGCCR 2 cut(s) 912, 1399
Eam1104I CTCTTC 2 cut(s) 580, 764
EarI CTCTTC 2 cut(s) 580, 764
EciI GGCGGA 2 cut(s) 902, 1491
Ecl136II GAGCTC 1 cut(s) 834
Eco24I GRGCYC 1 cut(s) 836
Eco31I GGTCTC 1 cut(s) 340
Eco32I GATATC 1 cut(s) 1524
Eco47I GGWCC 2 cut(s) 99, 1028
Eco53kI GAGCTC 1 cut(s) 834
Eco57I CTGAAG 1 cut(s) 171
Eco81I CCTNAGG 1 cut(s) 382
Eco88I CYCGRG 2 cut(s) 829, 1136
Eco91I GGTNACC 1 cut(s) 1268
EcoICRI GAGCTC 1 cut(s) 834
EcoO109I RGGNCCY 2 cut(s) 99, 221
EcoO65I GGTNACC 1 cut(s) 1268
EcoRI GAATTC 3 cut(s) 447, 1203, 1668
EcoRII CCWGG 1 cut(s) 818
EcoRV GATATC 1 cut(s) 1524
EcoT22I ATGCAT 1 cut(s) 168
EcoT38I GRGCYC 1 cut(s) 836
FaeI CATG 7 cut(s) 43, 303, 375, 898, 1015, 1024, 1051
FalI AAGNNNNNCTT 2 cut(s) 1114, 1146
FaqI GGGAC 1 cut(s) 418
FatI CATG 7 cut(s) 39, 299, 371, 894, 1011, 1020, 1047
FauI CCCGC 1 cut(s) 1563
FauNDI CATATG 1 cut(s) 168
FbaI TGATCA 2 cut(s) 984, 1077
FblI GTMKAC 2 cut(s) 541, 1196
Fnu4HI GCNGC 8 cut(s) 10, 48, 87, 503, 912, 933, 1052, 1541
FokI GGATG 3 cut(s) 90, 836, 1596
FriOI GRGCYC 1 cut(s) 836
Fsp4HI GCNGC 8 cut(s) 10, 48, 87, 503, 912, 933, 1052, 1541
FspBI CTAG 4 cut(s) 261, 512, 1209, 1674
FspI TGCGCA 1 cut(s) 656
GlaI GCGC 5 cut(s) 6, 8, 248, 656, 1629
GluI GCNGC 8 cut(s) 10, 48, 87, 503, 912, 933, 1052, 1541
GsuI CTGGAG 2 cut(s) 802, 1125
HaeII RGCGCY 1 cut(s) 250
HaeIII GGCC 3 cut(s) 222, 914, 1401
HapII CCGG 6 cut(s) 235, 420, 807, 1026, 1065, 1263
HhaI GCGC 5 cut(s) 7, 9, 249, 657, 1630
Hin1II CATG 7 cut(s) 43, 303, 375, 898, 1015, 1024, 1051
Hin6I GCGC 5 cut(s) 5, 7, 247, 655, 1628
HinP1I GCGC 5 cut(s) 5, 7, 247, 655, 1628
HincII GTYRAC 2 cut(s) 177, 1197
HindII GTYRAC 2 cut(s) 177, 1197
HinfI GANTC 6 cut(s) 293, 497, 588, 749, 754, 1531
HpaI GTTAAC 1 cut(s) 177
HpaII CCGG 6 cut(s) 235, 420, 807, 1026, 1065, 1263
HphI GGTGA 3 cut(s) 173, 994, 1480
Hpy166II GTNNAC 7 cut(s) 177, 267, 310, 425, 542, 1031, 1197
Hpy188I TCNGA 2 cut(s) 354, 1536
Hpy188III TCNNGA 8 cut(s) 22, 140, 394, 716, 952, 1075, 1340, 1577
Hpy8I GTNNAC 7 cut(s) 177, 267, 310, 425, 542, 1031, 1197
Hpy99I CGWCG 1 cut(s) 847
HpyAV CCTTC 8 cut(s) 234, 237, 400, 623, 666, 709, 713, 1629
HpyCH4III ACNGT 6 cut(s) 71, 193, 929, 1168, 1654, 1664
HpyCH4IV ACGT 4 cut(s) 173, 1096, 1287, 1511
HpyCH4V TGCA 7 cut(s) 67, 89, 166, 932, 1121, 1557, 1595
HpyF10VI GCNNNNNNNGC 6 cut(s) 244, 920, 929, 1041, 1127, 1546
HpyF3I CTNAG 9 cut(s) 239, 353, 382, 1225, 1314, 1319, 1544, 1550, 1683
HpySE526I ACGT 4 cut(s) 173, 1096, 1287, 1511
Hsp92II CATG 7 cut(s) 43, 303, 375, 898, 1015, 1024, 1051
HspAI GCGC 5 cut(s) 5, 7, 247, 655, 1628
Ksp22I TGATCA 2 cut(s) 984, 1077
KspAI GTTAAC 1 cut(s) 177
Kzo9I GATC 6 cut(s) 42, 520, 559, 984, 1077, 1695
LmnI GCTCC 7 cut(s) 383, 432, 821, 920, 1059, 1504, 1612
Lsp1109I GCAGC 5 cut(s) 34, 73, 944, 1038, 1527
MaeI CTAG 4 cut(s) 261, 512, 1209, 1674
MaeII ACGT 4 cut(s) 173, 1096, 1287, 1511
MaeIII GTNAC 5 cut(s) 335, 992, 1268, 1384, 1512
MalI GATC 6 cut(s) 44, 522, 561, 986, 1079, 1697
MbiI CCGCTC 1 cut(s) 435
MboI GATC 6 cut(s) 42, 520, 559, 984, 1077, 1695
MboII GAAGA 5 cut(s) 49, 594, 597, 751, 987
MflI RGATCY 1 cut(s) 1695
MhlI GDGCHC 5 cut(s) 234, 380, 442, 836, 1191
MlsI TGGCCA 1 cut(s) 1401
MluCI AATT 8 cut(s) 34, 272, 447, 602, 1203, 1367, 1408, 1668
MluNI TGGCCA 1 cut(s) 1401
MlyI GAGTC 3 cut(s) 287, 597, 743
MmeI TCCRAC 2 cut(s) 1091, 1581
Mox20I TGGCCA 1 cut(s) 1401
Mph1103I ATGCAT 1 cut(s) 168
MroXI GAANNNNTTC 1 cut(s) 1129
MscI TGGCCA 1 cut(s) 1401
MseI TTAA 1 cut(s) 176
MslI CAYNNNNRTG 1 cut(s) 152
Msp20I TGGCCA 1 cut(s) 1401
MspA1I CMGCKG 1 cut(s) 1634
MspI CCGG 6 cut(s) 235, 420, 807, 1026, 1065, 1263
MspR9I CCNGG 3 cut(s) 807, 820, 1026
MvaI CCWGG 1 cut(s) 820
MvnI CGCG 2 cut(s) 7, 502
MwoI GCNNNNNNNGC 6 cut(s) 244, 920, 929, 1041, 1127, 1546
NciI CCSGG 2 cut(s) 807, 1026
NdeI CATATG 1 cut(s) 168
NdeII GATC 6 cut(s) 42, 520, 559, 984, 1077, 1695
NlaIII CATG 7 cut(s) 43, 303, 375, 898, 1015, 1024, 1051
NlaIV GGNNCC 6 cut(s) 100, 233, 388, 817, 1608, 1697
NmuCI GTSAC 2 cut(s) 1384, 1512
NsbI TGCGCA 1 cut(s) 656
NsiI ATGCAT 1 cut(s) 168
NspI RCATGY 2 cut(s) 1024, 1051
NspV TTCGAA 1 cut(s) 1293
OliI CACNNNNGTG 1 cut(s) 152
PaeR7I CTCGAG 1 cut(s) 1136
PalAI GGCGCGCC 1 cut(s) 5
PauI GCGCGC 1 cut(s) 5
PcsI WCGNNNNNNNCGW 1 cut(s) 1517
PdmI GAANNNNTTC 1 cut(s) 1129
PfeI GAWTC 3 cut(s) 497, 754, 1531
PfoI TCCNGGA 1 cut(s) 818
PinAI ACCGGT 1 cut(s) 419
PkrI GCNGC 8 cut(s) 11, 49, 88, 504, 913, 934, 1053, 1542
PleI GAGTC 3 cut(s) 287, 596, 743
PpsI GAGTC 3 cut(s) 287, 596, 743
PpuMI RGGWCCY 1 cut(s) 99
Psp124BI GAGCTC 1 cut(s) 836
Psp5II RGGWCCY 1 cut(s) 99
Psp6I CCWGG 1 cut(s) 818
PspEI GGTNACC 1 cut(s) 1268
PspGI CCWGG 1 cut(s) 818
PspN4I GGNNCC 6 cut(s) 100, 233, 388, 817, 1608, 1697
PspPI GGNCC 3 cut(s) 99, 221, 1028
PspPPI RGGWCCY 1 cut(s) 99
PspXI VCTCGAGB 1 cut(s) 1136
PsrI GAACNNNNNNTAC 2 cut(s) 250, 282
PstI CTGCAG 1 cut(s) 91
PstNI CAGNNNCTG 1 cut(s) 1540
PsuI RGATCY 1 cut(s) 1695
PteI GCGCGC 1 cut(s) 5
PvuII CAGCTG 1 cut(s) 1634
RsaI GTAC 3 cut(s) 82, 268, 1286
RsaNI GTAC 3 cut(s) 81, 267, 1285
RseI CAYNNNNRTG 1 cut(s) 152
SacI GAGCTC 1 cut(s) 836
SalI GTCGAC 1 cut(s) 1195
SaqAI TTAA 1 cut(s) 176
SatI GCNGC 8 cut(s) 10, 48, 87, 503, 912, 933, 1052, 1541
Sau3AI GATC 6 cut(s) 42, 520, 559, 984, 1077, 1695
Sau96I GGNCC 3 cut(s) 99, 221, 1028
SchI GAGTC 3 cut(s) 287, 597, 743
ScrFI CCNGG 3 cut(s) 807, 820, 1026
SduI GDGCHC 5 cut(s) 234, 380, 442, 836, 1191
SfcI CTRYAG 2 cut(s) 87, 1700
Sfr274I CTCGAG 1 cut(s) 1136
SfuI TTCGAA 1 cut(s) 1293
SgsI GGCGCGCC 1 cut(s) 5
SinI GGWCC 2 cut(s) 99, 1028
SlaI CTCGAG 1 cut(s) 1136
SmiMI CAYNNNNRTG 1 cut(s) 152
SmlI CTYRAG 4 cut(s) 394, 441, 1136, 1190
SmoI CTYRAG 4 cut(s) 394, 441, 1136, 1190
Sse9I AATT 8 cut(s) 34, 272, 447, 602, 1203, 1367, 1408, 1668
SsiI CCGC 9 cut(s) 10, 277, 435, 502, 887, 911, 1478, 1502, 1570
SspMI CTAG 4 cut(s) 261, 512, 1209, 1674
SstI GAGCTC 1 cut(s) 836
StyD4I CCNGG 3 cut(s) 805, 818, 1024
TaaI ACNGT 6 cut(s) 71, 193, 929, 1168, 1654, 1664
TaiI ACGT 4 cut(s) 176, 1099, 1290, 1514
TaqI TCGA 8 cut(s) 104, 451, 752, 1137, 1196, 1293, 1520, 1526
TaqII GACCGA 1 cut(s) 835
TasI AATT 8 cut(s) 34, 272, 447, 602, 1203, 1367, 1408, 1668
TatI WGTACW 2 cut(s) 80, 266
TauI GCSGC 3 cut(s) 12, 505, 914
TfiI GAWTC 3 cut(s) 497, 754, 1531
Tru1I TTAA 1 cut(s) 176
Tru9I TTAA 1 cut(s) 176
TseFI GTSAC 2 cut(s) 1384, 1512
TseI GCWGC 5 cut(s) 47, 86, 932, 1051, 1540
Tsp45I GTSAC 2 cut(s) 1384, 1512
TspDTI ATGAA 4 cut(s) 615, 642, 721, 1544
TspGWI ACGGA 1 cut(s) 123
VpaK11BI GGWCC 2 cut(s) 99, 1028
XapI RAATTY 4 cut(s) 447, 602, 1203, 1668
XceI RCATGY 2 cut(s) 1024, 1051
XhoI CTCGAG 1 cut(s) 1136
XmiI GTMKAC 2 cut(s) 541, 1196
XmnI GAANNNNTTC 1 cut(s) 1129
XspI CTAG 4 cut(s) 261, 512, 1209, 1674
Zsp2I ATGCAT 1 cut(s) 168
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.