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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000008814 RLG00000029112 |
| rosa_roxburghii | Rroxscaffold_5G00350650 Rroxscaffold_6G00390820 |
| rosa_rugosa | Rorug02G0564700 Rorug03G0343300 Rorug03G0343400 Rorug05G0106300 Rorug06G0055000 Rorug07G0182200 |
| rosa_samantha | Rh1AG004700 Rh1CG049300 Rh1DG053500 Rh1DG177300 Rh2AG353900 Rh2AG642600 Rh3BG341600 Rh3BG341700 Rh3DG305000 Rh3DG341100 Rh4BG182500 Rh4BG182600 Rh5AG364400 Rh5AG365000 Rh5DG239800 Rh6CG205400 Rh6CG419600 Rh6DG498600 Rh7AG329200 Rh7BG319100 Rh7BG319200 Rh7CG346600 Rh7CG370700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 61 |
| AciI | CCGC | 3 cut(s) | 59, 169, 197 |
| AclWI | GGATC | 1 cut(s) | 140 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 49 |
| AhlI | ACTAGT | 1 cut(s) | 187 |
| AjnI | CCWGG | 1 cut(s) | 192 |
| AluBI | AGCT | 1 cut(s) | 67 |
| AluI | AGCT | 1 cut(s) | 67 |
| Alw21I | GWGCWC | 1 cut(s) | 69 |
| AlwI | GGATC | 1 cut(s) | 140 |
| Ama87I | CYCGRG | 1 cut(s) | 62 |
| AsuHPI | GGTGA | 1 cut(s) | 81 |
| AvaI | CYCGRG | 1 cut(s) | 62 |
| BanII | GRGCYC | 1 cut(s) | 69 |
| Bbv12I | GWGCWC | 1 cut(s) | 69 |
| BciT130I | CCWGG | 1 cut(s) | 194 |
| BcuI | ACTAGT | 1 cut(s) | 187 |
| BfaI | CTAG | 1 cut(s) | 188 |
| BisI | GCNGC | 2 cut(s) | 59, 198 |
| BlsI | GCNGC | 2 cut(s) | 60, 199 |
| Bme1390I | CCNGG | 1 cut(s) | 194 |
| BmeT110I | CYCGRG | 1 cut(s) | 62 |
| BmiI | GGNNCC | 2 cut(s) | 40, 78 |
| BmrFI | CCNGG | 1 cut(s) | 194 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 49 |
| Bse1I | ACTGG | 2 cut(s) | 23, 100 |
| BseBI | CCWGG | 1 cut(s) | 194 |
| BseGI | GGATG | 1 cut(s) | 118 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 49 |
| BseNI | ACTGG | 2 cut(s) | 23, 100 |
| BseRI | GAGGAG | 1 cut(s) | 69 |
| BsiHKAI | GWGCWC | 1 cut(s) | 69 |
| BsiHKCI | CYCGRG | 1 cut(s) | 62 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 49 |
| BsoBI | CYCGRG | 1 cut(s) | 62 |
| Bsp1286I | GDGCHC | 1 cut(s) | 69 |
| Bsp143I | GATC | 2 cut(s) | 145, 150 |
| BspACI | CCGC | 3 cut(s) | 59, 169, 197 |
| BspLI | GGNNCC | 2 cut(s) | 40, 78 |
| BspPI | GGATC | 1 cut(s) | 140 |
| BsrBI | CCGCTC | 1 cut(s) | 61 |
| BsrI | ACTGG | 2 cut(s) | 23, 100 |
| BssMI | GATC | 2 cut(s) | 145, 150 |
| Bst2UI | CCWGG | 1 cut(s) | 194 |
| Bst4CI | ACNGT | 1 cut(s) | 35 |
| Bst6I | CTCTTC | 1 cut(s) | 138 |
| BstF5I | GGATG | 1 cut(s) | 118 |
| BstKTI | GATC | 2 cut(s) | 148, 153 |
| BstMBI | GATC | 2 cut(s) | 145, 150 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 55, 64 |
| BstNI | CCWGG | 1 cut(s) | 194 |
| BstSCI | CCNGG | 1 cut(s) | 192 |
| BtsCI | GGATG | 1 cut(s) | 118 |
| CviAII | CATG | 4 cut(s) | 7, 46, 113, 137 |
| CviJI | RGCY | 4 cut(s) | 58, 67, 77, 200 |
| CviKI_1 | RGCY | 4 cut(s) | 58, 67, 77, 200 |
| DpnI | GATC | 2 cut(s) | 147, 152 |
| DpnII | GATC | 2 cut(s) | 145, 150 |
| Eam1104I | CTCTTC | 1 cut(s) | 138 |
| EarI | CTCTTC | 1 cut(s) | 138 |
| Ecl136II | GAGCTC | 1 cut(s) | 67 |
| Eco24I | GRGCYC | 1 cut(s) | 69 |
| Eco53kI | GAGCTC | 1 cut(s) | 67 |
| Eco88I | CYCGRG | 1 cut(s) | 62 |
| EcoICRI | GAGCTC | 1 cut(s) | 67 |
| EcoRII | CCWGG | 1 cut(s) | 192 |
| EcoT38I | GRGCYC | 1 cut(s) | 69 |
| FaeI | CATG | 4 cut(s) | 10, 49, 116, 140 |
| FaiI | YATR | 7 cut(s) | 8, 47, 101, 114, 138, 212, 230 |
| FatI | CATG | 4 cut(s) | 6, 45, 112, 136 |
| Fnu4HI | GCNGC | 2 cut(s) | 59, 198 |
| FokI | GGATG | 1 cut(s) | 105 |
| FriOI | GRGCYC | 1 cut(s) | 69 |
| Fsp4HI | GCNGC | 2 cut(s) | 59, 198 |
| FspBI | CTAG | 1 cut(s) | 188 |
| GluI | GCNGC | 2 cut(s) | 59, 198 |
| Hin1II | CATG | 4 cut(s) | 10, 49, 116, 140 |
| HphI | GGTGA | 1 cut(s) | 81 |
| Hpy188I | TCNGA | 2 cut(s) | 84, 150 |
| HpyAV | CCTTC | 2 cut(s) | 29, 81 |
| HpyCH4III | ACNGT | 1 cut(s) | 35 |
| HpyCH4V | TGCA | 2 cut(s) | 49, 140 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 55, 64 |
| Hsp92II | CATG | 4 cut(s) | 10, 49, 116, 140 |
| Kzo9I | GATC | 2 cut(s) | 145, 150 |
| LmnI | GCTCC | 2 cut(s) | 72, 82 |
| LpnPI | CCDG | 5 cut(s) | 35, 36, 81, 179, 206 |
| MaeI | CTAG | 1 cut(s) | 188 |
| MaeIII | GTNAC | 2 cut(s) | 29, 164 |
| MalI | GATC | 2 cut(s) | 147, 152 |
| MbiI | CCGCTC | 1 cut(s) | 61 |
| MboI | GATC | 2 cut(s) | 145, 150 |
| MboII | GAAGA | 4 cut(s) | 125, 194, 229, 232 |
| MhlI | GDGCHC | 1 cut(s) | 69 |
| MnlI | CCTC | 3 cut(s) | 90, 132, 141 |
| MspR9I | CCNGG | 1 cut(s) | 194 |
| MvaI | CCWGG | 1 cut(s) | 194 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 55, 64 |
| NdeII | GATC | 2 cut(s) | 145, 150 |
| NlaIII | CATG | 4 cut(s) | 10, 49, 116, 140 |
| NlaIV | GGNNCC | 2 cut(s) | 40, 78 |
| PaeR7I | CTCGAG | 1 cut(s) | 62 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 80 |
| PkrI | GCNGC | 2 cut(s) | 60, 199 |
| Psp124BI | GAGCTC | 1 cut(s) | 69 |
| Psp6I | CCWGG | 1 cut(s) | 192 |
| PspGI | CCWGG | 1 cut(s) | 192 |
| PspN4I | GGNNCC | 2 cut(s) | 40, 78 |
| PspXI | VCTCGAGB | 1 cut(s) | 62 |
| SacI | GAGCTC | 1 cut(s) | 69 |
| SatI | GCNGC | 2 cut(s) | 59, 198 |
| Sau3AI | GATC | 2 cut(s) | 145, 150 |
| ScrFI | CCNGG | 1 cut(s) | 194 |
| SduI | GDGCHC | 1 cut(s) | 69 |
| SetI | ASST | 2 cut(s) | 31, 69 |
| Sfr274I | CTCGAG | 1 cut(s) | 62 |
| SlaI | CTCGAG | 1 cut(s) | 62 |
| SmlI | CTYRAG | 1 cut(s) | 62 |
| SmoI | CTYRAG | 1 cut(s) | 62 |
| SpeI | ACTAGT | 1 cut(s) | 187 |
| SsiI | CCGC | 3 cut(s) | 59, 169, 197 |
| SspMI | CTAG | 1 cut(s) | 188 |
| SstI | GAGCTC | 1 cut(s) | 69 |
| StyD4I | CCNGG | 1 cut(s) | 192 |
| TaaI | ACNGT | 1 cut(s) | 35 |
| TaqI | TCGA | 1 cut(s) | 63 |
| TauI | GCSGC | 2 cut(s) | 61, 200 |
| TspDTI | ATGAA | 4 cut(s) | 17, 125, 195, 230 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 200 |
| XhoI | CTCGAG | 1 cut(s) | 62 |
| XspI | CTAG | 1 cut(s) | 188 |