Rh7AG285500

cysteine-type peptidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0003280
Physical Location & Seq
Forward (+)
30601060 .. 30601581
522 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG285500.1

Sequence Viewer

Length: 522 bp
ATGGGATTTGAGAAAAGAGAGTTTTTCTTATTAGTAGTACTAGTGTTGCTCAACAGTTCGGCAACATCAACAGCTAGCCGTCCACTTTCAACCAATTCTGATGATCTCATCAAAGTGTTTGAGGATTGGGCCCTCGAACACAAACGTGTCTATCCTACTGAAGAAGAGAAACAAATGCGATTTGAAAACTGCAGAGCAACGTATGAGTTCGTGGACAAATTCTACAAGGAAGGTGGTGAGAGTAAACTCTACACAGTCGGCCTGAACGCATTTGCTGACATGACAAACGAAGAATTCTACGATGCTCATGCTTGCTTTATAGATCATGCCTATGACGTCGTCTCAAGCTCGACCACGACTTCGTCATCATCCTCTGCTAAAGTTTATGAAAACAAAGAGCAAGAATTATGTGGCGGAGTGACTGACTGGGCCGCTTTGGGAATGATTAGCGCTCATACATCTCTCTTTCACTTTGCCGATCTAATTGTTAAGGTCAATTTGTTCAGGGGTCCATACAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04140 ko04142 ko04145 ko04210 ko04612 ko04621 ko04924 ko05205 ko05323 ko05418 map04140 map04142 map04145 map04210 map04612 map04621 map04924 map05205 map05323 map05418
Pfam Domains
Protein Families
Granulin Inhibitor_I29 Peptidase_C1

Protein Analysis

173

Amino Acids

19.65

Weight (kDa)

5.01

Isoelectric Point (pI)

32.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I29 PF08246 40 - 99 3.5e-13 Cathepsin propeptide inhibitor domain (I29)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 339
AciI CCGC 2 cut(s) 414, 432
AcsI RAATTY 2 cut(s) 218, 293
AcuI CTGAAG 1 cut(s) 180
AcyI GRCGYC 1 cut(s) 336
AfaI GTAC 1 cut(s) 39
AfeI AGCGCT 1 cut(s) 451
AflIII ACRYGT 1 cut(s) 145
AgsI TTSAA 2 cut(s) 90, 185
AhlI ACTAGT 1 cut(s) 40
AleI CACNNNNGTG 1 cut(s) 144
AluBI AGCT 2 cut(s) 74, 348
AluI AGCT 2 cut(s) 74, 348
Alw26I GTCTC 1 cut(s) 346
Aor51HI AGCGCT 1 cut(s) 451
AoxI GGCC 3 cut(s) 129, 259, 429
ApaI GGGCCC 1 cut(s) 133
ApoI RAATTY 2 cut(s) 218, 293
ArsI GACNNNNNNTTYG 2 cut(s) 343, 375
AspLEI GCGC 1 cut(s) 452
AspS9I GGNCC 4 cut(s) 129, 130, 429, 509
AsuHPI GGTGA 1 cut(s) 248
AsuNHI GCTAGC 1 cut(s) 74
AvaII GGWCC 1 cut(s) 509
BaeGI GKGCMC 1 cut(s) 133
BanII GRGCYC 1 cut(s) 133
BceAI ACGGC 1 cut(s) 63
BcgI CGANNNNNNTGC 2 cut(s) 290, 324
BcoDI GTCTC 1 cut(s) 346
BcuI ACTAGT 1 cut(s) 40
BfaI CTAG 2 cut(s) 41, 75
BfmI CTRYAG 1 cut(s) 190
BfoI RGCGCY 1 cut(s) 453
BisI GCNGC 1 cut(s) 432
BlsI GCNGC 1 cut(s) 433
BmcAI AGTACT 1 cut(s) 39
Bme18I GGWCC 1 cut(s) 509
BmgT120I GGNCC 4 cut(s) 129, 130, 429, 509
BmiI GGNNCC 2 cut(s) 131, 510
BmrI ACTGGG 1 cut(s) 436
BmsI GCATC 1 cut(s) 292
BmtI GCTAGC 1 cut(s) 78
BmuI ACTGGG 1 cut(s) 436
BpuEI CTTGAG 1 cut(s) 328
BsaHI GRCGYC 1 cut(s) 336
Bse1I ACTGG 1 cut(s) 431
BseGI GGATG 1 cut(s) 368
BseNI ACTGG 1 cut(s) 431
BseSI GKGCMC 1 cut(s) 133
BshFI GGCC 3 cut(s) 131, 261, 431
BsmAI GTCTC 1 cut(s) 346
BsmBI CGTCTC 1 cut(s) 346
BsnI GGCC 3 cut(s) 131, 261, 431
Bsp120I GGGCCC 1 cut(s) 129
Bsp1286I GDGCHC 1 cut(s) 133
Bsp143I GATC 3 cut(s) 103, 322, 478
BspACI CCGC 2 cut(s) 414, 432
BspANI GGCC 3 cut(s) 131, 261, 431
BspLI GGNNCC 2 cut(s) 131, 510
BspMAI CTGCAG 1 cut(s) 194
BspOI GCTAGC 1 cut(s) 78
BsrI ACTGG 1 cut(s) 431
BssMI GATC 3 cut(s) 103, 322, 478
BssNI GRCGYC 1 cut(s) 336
Bst4CI ACNGT 2 cut(s) 56, 256
Bst6I CTCTTC 1 cut(s) 159
BstACI GRCGYC 1 cut(s) 336
BstC8I GCNNGC 2 cut(s) 76, 313
BstF5I GGATG 1 cut(s) 368
BstH2I RGCGCY 1 cut(s) 453
BstHHI GCGC 1 cut(s) 452
BstKTI GATC 3 cut(s) 106, 325, 481
BstMAI GTCTC 1 cut(s) 346
BstMBI GATC 3 cut(s) 103, 322, 478
BstSFI CTRYAG 1 cut(s) 190
BstSLI GKGCMC 1 cut(s) 133
BsuRI GGCC 3 cut(s) 131, 261, 431
BtsCI GGATG 1 cut(s) 368
Cac8I GCNNGC 2 cut(s) 76, 313
CfoI GCGC 1 cut(s) 452
Cfr13I GGNCC 4 cut(s) 129, 130, 429, 509
Csp6I GTAC 1 cut(s) 38
CspCI CAANNNNNGTGG 2 cut(s) 214, 249
CviAII CATG 3 cut(s) 280, 308, 326
CviJI RGCY 6 cut(s) 74, 78, 131, 261, 348, 431
CviKI_1 RGCY 6 cut(s) 74, 78, 131, 261, 348, 431
CviQI GTAC 1 cut(s) 38
DpnI GATC 3 cut(s) 105, 324, 480
DpnII GATC 3 cut(s) 103, 322, 478
Eam1104I CTCTTC 1 cut(s) 159
EarI CTCTTC 1 cut(s) 159
EciI GGCGGA 1 cut(s) 429
Eco24I GRGCYC 1 cut(s) 133
Eco47I GGWCC 1 cut(s) 509
Eco47III AGCGCT 1 cut(s) 451
Eco57I CTGAAG 1 cut(s) 180
EcoO109I RGGNCCY 1 cut(s) 130
EcoRI GAATTC 1 cut(s) 293
EcoT38I GRGCYC 1 cut(s) 133
Esp3I CGTCTC 1 cut(s) 346
FaeI CATG 3 cut(s) 283, 311, 329
FatI CATG 3 cut(s) 279, 307, 325
Fnu4HI GCNGC 1 cut(s) 432
FokI GGATG 1 cut(s) 355
FriOI GRGCYC 1 cut(s) 133
Fsp4HI GCNGC 1 cut(s) 432
FspBI CTAG 2 cut(s) 41, 75
GlaI GCGC 1 cut(s) 451
GluI GCNGC 1 cut(s) 432
HaeII RGCGCY 1 cut(s) 453
HaeIII GGCC 3 cut(s) 131, 261, 431
HhaI GCGC 1 cut(s) 452
Hin1I GRCGYC 1 cut(s) 336
Hin1II CATG 3 cut(s) 283, 311, 329
Hin6I GCGC 1 cut(s) 450
HinP1I GCGC 1 cut(s) 450
HphI GGTGA 1 cut(s) 248
Hpy166II GTNNAC 3 cut(s) 83, 214, 245
Hpy188I TCNGA 1 cut(s) 100
Hpy8I GTNNAC 3 cut(s) 83, 214, 245
Hpy99I CGWCG 1 cut(s) 341
HpyAV CCTTC 1 cut(s) 224
HpyCH4III ACNGT 2 cut(s) 56, 256
HpyCH4IV ACGT 3 cut(s) 145, 200, 336
HpyCH4V TGCA 1 cut(s) 192
HpySE526I ACGT 3 cut(s) 145, 200, 336
Hsp92I GRCGYC 1 cut(s) 336
Hsp92II CATG 3 cut(s) 283, 311, 329
HspAI GCGC 1 cut(s) 450
Kzo9I GATC 3 cut(s) 103, 322, 478
LpnPI CCDG 3 cut(s) 275, 412, 490
LweI GCATC 1 cut(s) 292
MaeI CTAG 2 cut(s) 41, 75
MaeII ACGT 3 cut(s) 145, 200, 336
MaeIII GTNAC 1 cut(s) 418
MalI GATC 3 cut(s) 105, 324, 480
MboI GATC 3 cut(s) 103, 322, 478
MboII GAAGA 3 cut(s) 173, 176, 302
MhlI GDGCHC 1 cut(s) 133
MluCI AATT 6 cut(s) 94, 218, 293, 404, 483, 496
MnlI CCTC 3 cut(s) 115, 143, 382
MseI TTAA 1 cut(s) 489
MslI CAYNNNNRTG 3 cut(s) 113, 144, 330
NdeII GATC 3 cut(s) 103, 322, 478
NheI GCTAGC 1 cut(s) 74
NlaIII CATG 3 cut(s) 283, 311, 329
NlaIV GGNNCC 2 cut(s) 131, 510
NmuCI GTSAC 1 cut(s) 418
OliI CACNNNNGTG 1 cut(s) 144
PflFI GACNNNGTC 2 cut(s) 338, 361
PkrI GCNGC 1 cut(s) 433
PspN4I GGNNCC 2 cut(s) 131, 510
PspOMI GGGCCC 1 cut(s) 129
PspPI GGNCC 4 cut(s) 129, 130, 429, 509
PstI CTGCAG 1 cut(s) 194
PsyI GACNNNGTC 2 cut(s) 338, 361
RsaI GTAC 1 cut(s) 39
RsaNI GTAC 1 cut(s) 38
RseI CAYNNNNRTG 3 cut(s) 113, 144, 330
SaqAI TTAA 1 cut(s) 489
SatI GCNGC 1 cut(s) 432
Sau3AI GATC 3 cut(s) 103, 322, 478
Sau96I GGNCC 4 cut(s) 129, 130, 429, 509
ScaI AGTACT 1 cut(s) 39
SduI GDGCHC 1 cut(s) 133
SetI ASST 7 cut(s) 76, 148, 203, 235, 339, 350, 495
SfaNI GCATC 1 cut(s) 292
SfcI CTRYAG 1 cut(s) 190
SinI GGWCC 1 cut(s) 509
SmiMI CAYNNNNRTG 3 cut(s) 113, 144, 330
SmlI CTYRAG 1 cut(s) 343
SmoI CTYRAG 1 cut(s) 343
SpeI ACTAGT 1 cut(s) 40
Sse9I AATT 6 cut(s) 94, 218, 293, 404, 483, 496
SsiI CCGC 2 cut(s) 414, 432
SspMI CTAG 2 cut(s) 41, 75
TaaI ACNGT 2 cut(s) 56, 256
TaiI ACGT 3 cut(s) 148, 203, 339
TaqI TCGA 2 cut(s) 135, 350
TasI AATT 6 cut(s) 94, 218, 293, 404, 483, 496
TatI WGTACW 1 cut(s) 37
TauI GCSGC 1 cut(s) 434
Tru1I TTAA 1 cut(s) 489
Tru9I TTAA 1 cut(s) 489
TseFI GTSAC 1 cut(s) 418
Tsp45I GTSAC 1 cut(s) 418
TspDTI ATGAA 1 cut(s) 402
Tth111I GACNNNGTC 2 cut(s) 338, 361
VpaK11BI GGWCC 1 cut(s) 509
XapI RAATTY 2 cut(s) 218, 293
XspI CTAG 2 cut(s) 41, 75
ZraI GACGTC 1 cut(s) 337
ZrmI AGTACT 1 cut(s) 39
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.