Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G63910 |
| fragaria_vesca | FvH4_5g03100 FvH4_5g03110 |
| malus_domestica | MD06G1089700.v1.1 MD06G1089800.v1.1 MD06G1090000.v1.1 MD14G1110800.v1.1 MD14G1110900.v1.1 |
| prunus_persica | Prupe.5G105700_v2.0.a1 Prupe.5G105800_v2.0.a1 |
| pyrus_communis | pycom06g08560 pycom14g10550 |
| rosa_chinensis | RchiOBHm_Chr7g0196701 RchiOBHm_Chr7g0196711 |
| rosa_laevigata | RLG00000003995 RLG00000003996 |
| rosa_multiflora | Rmu_co8407595.1_g000001 Rmu_sc0010880.1_g000002 Rmu_sc0018739.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00259020 Rroxscaffold_3G00259030 |
| rosa_rugosa | Rorug07G0035800 Rorug07G0035900 |
| rosa_samantha | Rh1DG391700 Rh7AG129800 Rh7AG159700 Rh7BG161700 Rh7BG161900 Rh7CG168100 Rh7CG168200 Rh7DG160900 Rh7DG161000 |
| rosa_wichuraiana | Rw0G000330 Rw0G000350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 216 |
| AfaI | GTAC | 3 cut(s) | 115, 147, 295 |
| AflIII | ACRYGT | 1 cut(s) | 148 |
| AgsI | TTSAA | 4 cut(s) | 224, 323, 366, 464 |
| AlwI | GGATC | 1 cut(s) | 216 |
| Ama87I | CYCGRG | 1 cut(s) | 120 |
| AoxI | GGCC | 2 cut(s) | 59, 494 |
| ApeKI | GCWGC | 1 cut(s) | 92 |
| AseI | ATTAAT | 1 cut(s) | 135 |
| AspS9I | GGNCC | 1 cut(s) | 494 |
| AsuC2I | CCSGG | 1 cut(s) | 415 |
| AsuHPI | GGTGA | 1 cut(s) | 368 |
| AsuII | TTCGAA | 1 cut(s) | 434 |
| AvaI | CYCGRG | 1 cut(s) | 120 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 283, 315 |
| BbsI | GAAGAC | 1 cut(s) | 522 |
| BbvI | GCAGC | 1 cut(s) | 79 |
| BccI | CCATC | 2 cut(s) | 286, 550 |
| BceAI | ACGGC | 1 cut(s) | 46 |
| BclI | TGATCA | 1 cut(s) | 103 |
| BcnI | CCSGG | 1 cut(s) | 415 |
| BfmI | CTRYAG | 1 cut(s) | 237 |
| BisI | GCNGC | 1 cut(s) | 93 |
| BlsI | GCNGC | 1 cut(s) | 94 |
| BmcAI | AGTACT | 1 cut(s) | 295 |
| Bme1390I | CCNGG | 1 cut(s) | 415 |
| BmeT110I | CYCGRG | 1 cut(s) | 120 |
| BmgT120I | GGNCC | 1 cut(s) | 494 |
| BmiI | GGNNCC | 1 cut(s) | 517 |
| BmrFI | CCNGG | 1 cut(s) | 415 |
| BmsI | GCATC | 1 cut(s) | 250 |
| BpiI | GAAGAC | 1 cut(s) | 522 |
| Bpu14I | TTCGAA | 1 cut(s) | 434 |
| BpuMI | CCSGG | 1 cut(s) | 415 |
| BsaBI | GATNNNNATC | 1 cut(s) | 264 |
| Bse3DI | GCAATG | 1 cut(s) | 51 |
| Bse8I | GATNNNNATC | 1 cut(s) | 264 |
| BseGI | GGATG | 4 cut(s) | 265, 278, 487, 542 |
| BseJI | GATNNNNATC | 1 cut(s) | 264 |
| BseMI | GCAATG | 1 cut(s) | 51 |
| BseXI | GCAGC | 1 cut(s) | 79 |
| BseYI | CCCAGC | 2 cut(s) | 450, 491 |
| BshFI | GGCC | 2 cut(s) | 61, 496 |
| BsiHKCI | CYCGRG | 1 cut(s) | 120 |
| BsiSI | CCGG | 1 cut(s) | 415 |
| BsnI | GGCC | 2 cut(s) | 61, 496 |
| BsoBI | CYCGRG | 1 cut(s) | 120 |
| Bsp119I | TTCGAA | 1 cut(s) | 434 |
| Bsp1407I | TGTACA | 1 cut(s) | 145 |
| Bsp143I | GATC | 4 cut(s) | 28, 103, 154, 208 |
| BspANI | GGCC | 2 cut(s) | 61, 496 |
| BspHI | TCATGA | 1 cut(s) | 106 |
| BspLI | GGNNCC | 1 cut(s) | 517 |
| BspPI | GGATC | 1 cut(s) | 216 |
| BspT104I | TTCGAA | 1 cut(s) | 434 |
| BsrDI | GCAATG | 1 cut(s) | 51 |
| BsrGI | TGTACA | 1 cut(s) | 145 |
| BssMI | GATC | 4 cut(s) | 28, 103, 154, 208 |
| Bst4CI | ACNGT | 2 cut(s) | 304, 429 |
| BstAUI | TGTACA | 1 cut(s) | 145 |
| BstBI | TTCGAA | 1 cut(s) | 434 |
| BstC8I | GCNNGC | 1 cut(s) | 377 |
| BstF5I | GGATG | 4 cut(s) | 265, 278, 487, 542 |
| BstKTI | GATC | 4 cut(s) | 31, 106, 157, 211 |
| BstMBI | GATC | 4 cut(s) | 28, 103, 154, 208 |
| BstNSI | RCATGY | 2 cut(s) | 9, 152 |
| BstSCI | CCNGG | 1 cut(s) | 413 |
| BstSFI | CTRYAG | 1 cut(s) | 237 |
| BstV1I | GCAGC | 1 cut(s) | 79 |
| BstV2I | GAAGAC | 1 cut(s) | 522 |
| BsuRI | GGCC | 2 cut(s) | 61, 496 |
| BtgZI | GCGATG | 1 cut(s) | 488 |
| BtsCI | GGATG | 4 cut(s) | 265, 278, 487, 542 |
| Cac8I | GCNNGC | 1 cut(s) | 377 |
| CciI | TCATGA | 1 cut(s) | 106 |
| Cfr13I | GGNCC | 1 cut(s) | 494 |
| Csp6I | GTAC | 3 cut(s) | 114, 146, 294 |
| CviAII | CATG | 7 cut(s) | 6, 107, 149, 198, 256, 316, 473 |
| CviJI | RGCY | 4 cut(s) | 61, 92, 496, 518 |
| CviKI_1 | RGCY | 4 cut(s) | 61, 92, 496, 518 |
| CviQI | GTAC | 3 cut(s) | 114, 146, 294 |
| DpnI | GATC | 4 cut(s) | 30, 105, 156, 210 |
| DpnII | GATC | 4 cut(s) | 28, 103, 154, 208 |
| Eco88I | CYCGRG | 1 cut(s) | 120 |
| FaeI | CATG | 7 cut(s) | 9, 110, 152, 201, 259, 319, 476 |
| FatI | CATG | 7 cut(s) | 5, 106, 148, 197, 255, 315, 472 |
| FbaI | TGATCA | 1 cut(s) | 103 |
| Fnu4HI | GCNGC | 1 cut(s) | 93 |
| FokI | GGATG | 4 cut(s) | 265, 272, 494, 529 |
| Fsp4HI | GCNGC | 1 cut(s) | 93 |
| GluI | GCNGC | 1 cut(s) | 93 |
| GsaI | CCCAGC | 2 cut(s) | 454, 495 |
| HaeIII | GGCC | 2 cut(s) | 61, 496 |
| HapII | CCGG | 1 cut(s) | 415 |
| Hin1II | CATG | 7 cut(s) | 9, 110, 152, 201, 259, 319, 476 |
| HinfI | GANTC | 3 cut(s) | 40, 329, 382 |
| HpaII | CCGG | 1 cut(s) | 415 |
| HphI | GGTGA | 1 cut(s) | 368 |
| Hpy166II | GTNNAC | 1 cut(s) | 178 |
| Hpy188I | TCNGA | 1 cut(s) | 554 |
| Hpy188III | TCNNGA | 2 cut(s) | 107, 389 |
| Hpy8I | GTNNAC | 1 cut(s) | 178 |
| HpyAV | CCTTC | 3 cut(s) | 239, 243, 347 |
| HpyCH4III | ACNGT | 2 cut(s) | 304, 429 |
| HpyCH4IV | ACGT | 1 cut(s) | 174 |
| HpyCH4V | TGCA | 6 cut(s) | 56, 68, 263, 311, 379, 401 |
| HpySE526I | ACGT | 1 cut(s) | 174 |
| Hsp92II | CATG | 7 cut(s) | 9, 110, 152, 201, 259, 319, 476 |
| Ksp22I | TGATCA | 1 cut(s) | 103 |
| Kzo9I | GATC | 4 cut(s) | 28, 103, 154, 208 |
| LmnI | GCTCC | 1 cut(s) | 515 |
| LpnPI | CCDG | 4 cut(s) | 374, 428, 436, 477 |
| Lsp1109I | GCAGC | 1 cut(s) | 79 |
| LweI | GCATC | 1 cut(s) | 250 |
| MaeII | ACGT | 1 cut(s) | 174 |
| MalI | GATC | 4 cut(s) | 30, 105, 156, 210 |
| MboI | GATC | 4 cut(s) | 28, 103, 154, 208 |
| MboII | GAAGA | 3 cut(s) | 362, 476, 522 |
| MluCI | AATT | 1 cut(s) | 486 |
| MlyI | GAGTC | 1 cut(s) | 391 |
| MnlI | CCTC | 4 cut(s) | 82, 103, 293, 470 |
| MseI | TTAA | 4 cut(s) | 12, 135, 272, 306 |
| MspI | CCGG | 1 cut(s) | 415 |
| MspR9I | CCNGG | 1 cut(s) | 415 |
| NciI | CCSGG | 1 cut(s) | 415 |
| NdeII | GATC | 4 cut(s) | 28, 103, 154, 208 |
| NlaIII | CATG | 7 cut(s) | 9, 110, 152, 201, 259, 319, 476 |
| NlaIV | GGNNCC | 1 cut(s) | 517 |
| NspI | RCATGY | 2 cut(s) | 9, 152 |
| NspV | TTCGAA | 1 cut(s) | 434 |
| PaeR7I | CTCGAG | 1 cut(s) | 120 |
| PagI | TCATGA | 1 cut(s) | 106 |
| PciI | ACATGT | 1 cut(s) | 148 |
| PfeI | GAWTC | 2 cut(s) | 40, 329 |
| PkrI | GCNGC | 1 cut(s) | 94 |
| PleI | GAGTC | 1 cut(s) | 390 |
| PpsI | GAGTC | 1 cut(s) | 390 |
| PscI | ACATGT | 1 cut(s) | 148 |
| PshBI | ATTAAT | 1 cut(s) | 135 |
| PspFI | CCCAGC | 2 cut(s) | 450, 491 |
| PspN4I | GGNNCC | 1 cut(s) | 517 |
| PspPI | GGNCC | 1 cut(s) | 494 |
| PspXI | VCTCGAGB | 1 cut(s) | 120 |
| RsaI | GTAC | 3 cut(s) | 115, 147, 295 |
| RsaNI | GTAC | 3 cut(s) | 114, 146, 294 |
| SaqAI | TTAA | 4 cut(s) | 12, 135, 272, 306 |
| SatI | GCNGC | 1 cut(s) | 93 |
| Sau3AI | GATC | 4 cut(s) | 28, 103, 154, 208 |
| Sau96I | GGNCC | 1 cut(s) | 494 |
| ScaI | AGTACT | 1 cut(s) | 295 |
| SchI | GAGTC | 1 cut(s) | 391 |
| ScrFI | CCNGG | 1 cut(s) | 415 |
| SetI | ASST | 3 cut(s) | 177, 358, 552 |
| SfaNI | GCATC | 1 cut(s) | 250 |
| SfcI | CTRYAG | 1 cut(s) | 237 |
| Sfr274I | CTCGAG | 1 cut(s) | 120 |
| SfuI | TTCGAA | 1 cut(s) | 434 |
| SlaI | CTCGAG | 1 cut(s) | 120 |
| SmlI | CTYRAG | 1 cut(s) | 120 |
| SmoI | CTYRAG | 1 cut(s) | 120 |
| Sse9I | AATT | 1 cut(s) | 486 |
| SspI | AATATT | 1 cut(s) | 343 |
| StyD4I | CCNGG | 1 cut(s) | 413 |
| TaaI | ACNGT | 2 cut(s) | 304, 429 |
| TaiI | ACGT | 1 cut(s) | 177 |
| TaqI | TCGA | 3 cut(s) | 121, 182, 434 |
| TasI | AATT | 1 cut(s) | 486 |
| TatI | WGTACW | 2 cut(s) | 145, 293 |
| TfiI | GAWTC | 2 cut(s) | 40, 329 |
| Tru1I | TTAA | 4 cut(s) | 12, 135, 272, 306 |
| Tru9I | TTAA | 4 cut(s) | 12, 135, 272, 306 |
| TseI | GCWGC | 1 cut(s) | 92 |
| TspDTI | ATGAA | 6 cut(s) | 40, 363, 398, 491, 498, 522 |
| VspI | ATTAAT | 1 cut(s) | 135 |
| XceI | RCATGY | 2 cut(s) | 9, 152 |
| XhoI | CTCGAG | 1 cut(s) | 120 |
| ZrmI | AGTACT | 1 cut(s) | 295 |