Histone deacetylase HDT1-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G44750 AT3G44750 AT5G22650 AT5G22650 |
| fragaria_vesca | FvH4_3g29940 FvH4_3g29940 FvH4_3g29940 FvH4_3g29940 |
| malus_domestica | MD03G1134300.v1.1 MD03G1134400.v1.1 MD11G1156500.v1.1 MD11G1156600.v1.1 |
| prunus_persica | Prupe.6G118700_v2.0.a1 Prupe.6G118700_v2.0.a1 |
| pyrus_communis | pycom03g09030 pycom11g12710 |
| rosa_chinensis | RchiOBHm_Chr5g0055321 RchiOBHm_Chr5g0055331 |
| rosa_laevigata | RLG00000006424 RLG00000025325 RLG00000030120 RLG00000034982 |
| rosa_multiflora | Rmu_co8477099.1_g000001 Rmu_sc0003641.1_g000018 Rmu_sc0011151.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00025000 Rroxscaffold_1G00036030 |
| rosa_rugosa | Rorug05G0292300 |
| rosa_samantha | Rh4BG009400 Rh5AG362100 Rh5AG362200 Rh5BG373700 Rh5CG371500 Rh5CG395800 Rh5CG395900 Rh5DG356700 Rh5DG387300 Rh5DG387400 Rh7AG320500 Rh7DG436400 |
| rosa_wichuraiana | Rw2G041190 Rw5G034060 Rw7G037170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 373 |
| AcsI | RAATTY | 1 cut(s) | 288 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 216 |
| AgsI | TTSAA | 4 cut(s) | 203, 233, 323, 388 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 119, 151 |
| AluBI | AGCT | 4 cut(s) | 36, 89, 130, 371 |
| AluI | AGCT | 4 cut(s) | 36, 89, 130, 371 |
| AlwI | GGATC | 1 cut(s) | 373 |
| AoxI | GGCC | 1 cut(s) | 402 |
| ApeKI | GCWGC | 3 cut(s) | 86, 275, 371 |
| ApoI | RAATTY | 1 cut(s) | 288 |
| AspS9I | GGNCC | 1 cut(s) | 402 |
| AsuC2I | CCSGG | 1 cut(s) | 30 |
| BbvI | GCAGC | 3 cut(s) | 98, 262, 358 |
| BccI | CCATC | 2 cut(s) | 389, 404 |
| BcnI | CCSGG | 1 cut(s) | 30 |
| BfaI | CTAG | 1 cut(s) | 153 |
| BfmI | CTRYAG | 1 cut(s) | 276 |
| BisI | GCNGC | 3 cut(s) | 87, 276, 372 |
| BlsI | GCNGC | 3 cut(s) | 88, 277, 373 |
| Bme1390I | CCNGG | 1 cut(s) | 30 |
| BmgT120I | GGNCC | 1 cut(s) | 402 |
| BmrFI | CCNGG | 1 cut(s) | 30 |
| BmrI | ACTGGG | 1 cut(s) | 260 |
| BmsI | GCATC | 1 cut(s) | 151 |
| BmuI | ACTGGG | 1 cut(s) | 260 |
| BpuMI | CCSGG | 1 cut(s) | 30 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 216 |
| Bse1I | ACTGG | 2 cut(s) | 221, 266 |
| BseGI | GGATG | 1 cut(s) | 400 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 216 |
| BseNI | ACTGG | 2 cut(s) | 221, 266 |
| BseRI | GAGGAG | 1 cut(s) | 266 |
| BseXI | GCAGC | 3 cut(s) | 98, 262, 358 |
| BshFI | GGCC | 1 cut(s) | 404 |
| BsiSI | CCGG | 1 cut(s) | 29 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 216 |
| BsnI | GGCC | 1 cut(s) | 404 |
| Bsp143I | GATC | 4 cut(s) | 3, 114, 306, 365 |
| BspANI | GGCC | 1 cut(s) | 404 |
| BspMAI | CTGCAG | 1 cut(s) | 280 |
| BspPI | GGATC | 1 cut(s) | 373 |
| BsrI | ACTGG | 2 cut(s) | 221, 266 |
| BssMI | GATC | 4 cut(s) | 3, 114, 306, 365 |
| Bst4CI | ACNGT | 2 cut(s) | 168, 384 |
| Bst6I | CTCTTC | 1 cut(s) | 243 |
| BstF5I | GGATG | 1 cut(s) | 400 |
| BstKTI | GATC | 4 cut(s) | 6, 117, 309, 368 |
| BstMBI | GATC | 4 cut(s) | 3, 114, 306, 365 |
| BstSCI | CCNGG | 1 cut(s) | 28 |
| BstSFI | CTRYAG | 1 cut(s) | 276 |
| BstV1I | GCAGC | 3 cut(s) | 98, 262, 358 |
| BsuRI | GGCC | 1 cut(s) | 404 |
| BtsCI | GGATG | 1 cut(s) | 400 |
| BtsIMutI | CAGTG | 1 cut(s) | 273 |
| Cfr13I | GGNCC | 1 cut(s) | 402 |
| CviJI | RGCY | 6 cut(s) | 36, 89, 130, 156, 371, 404 |
| CviKI_1 | RGCY | 6 cut(s) | 36, 89, 130, 156, 371, 404 |
| DpnI | GATC | 4 cut(s) | 5, 116, 308, 367 |
| DpnII | GATC | 4 cut(s) | 3, 114, 306, 365 |
| Eam1104I | CTCTTC | 1 cut(s) | 243 |
| EarI | CTCTTC | 1 cut(s) | 243 |
| EcoO109I | RGGNCCY | 1 cut(s) | 402 |
| FaiI | YATR | 2 cut(s) | 108, 433 |
| Fnu4HI | GCNGC | 3 cut(s) | 87, 276, 372 |
| FokI | GGATG | 1 cut(s) | 407 |
| Fsp4HI | GCNGC | 3 cut(s) | 87, 276, 372 |
| FspBI | CTAG | 1 cut(s) | 153 |
| GluI | GCNGC | 3 cut(s) | 87, 276, 372 |
| HaeIII | GGCC | 1 cut(s) | 404 |
| HapII | CCGG | 1 cut(s) | 29 |
| HindIII | AAGCTT | 1 cut(s) | 128 |
| HinfI | GANTC | 4 cut(s) | 25, 74, 233, 239 |
| HpaII | CCGG | 1 cut(s) | 29 |
| Hpy188I | TCNGA | 5 cut(s) | 24, 119, 238, 244, 409 |
| HpyAV | CCTTC | 3 cut(s) | 76, 385, 393 |
| HpyCH4III | ACNGT | 2 cut(s) | 168, 384 |
| HpyCH4V | TGCA | 3 cut(s) | 56, 66, 278 |
| Kzo9I | GATC | 4 cut(s) | 3, 114, 306, 365 |
| LpnPI | CCDG | 4 cut(s) | 42, 54, 202, 279 |
| Lsp1109I | GCAGC | 3 cut(s) | 98, 262, 358 |
| LweI | GCATC | 1 cut(s) | 151 |
| MaeI | CTAG | 1 cut(s) | 153 |
| MalI | GATC | 4 cut(s) | 5, 116, 308, 367 |
| MboI | GATC | 4 cut(s) | 3, 114, 306, 365 |
| MboII | GAAGA | 6 cut(s) | 257, 260, 269, 335, 388, 400 |
| MluCI | AATT | 1 cut(s) | 288 |
| MlyI | GAGTC | 2 cut(s) | 83, 248 |
| MnlI | CCTC | 3 cut(s) | 244, 247, 415 |
| MspA1I | CMGCKG | 2 cut(s) | 89, 371 |
| MspI | CCGG | 1 cut(s) | 29 |
| MspR9I | CCNGG | 1 cut(s) | 30 |
| NciI | CCSGG | 1 cut(s) | 30 |
| NdeII | GATC | 4 cut(s) | 3, 114, 306, 365 |
| PfeI | GAWTC | 2 cut(s) | 25, 233 |
| PfoI | TCCNGGA | 1 cut(s) | 28 |
| PkrI | GCNGC | 3 cut(s) | 88, 277, 373 |
| PleI | GAGTC | 2 cut(s) | 82, 247 |
| PpsI | GAGTC | 2 cut(s) | 82, 247 |
| PspPI | GGNCC | 1 cut(s) | 402 |
| PstI | CTGCAG | 1 cut(s) | 280 |
| PvuII | CAGCTG | 2 cut(s) | 89, 371 |
| SatI | GCNGC | 3 cut(s) | 87, 276, 372 |
| Sau3AI | GATC | 4 cut(s) | 3, 114, 306, 365 |
| Sau96I | GGNCC | 1 cut(s) | 402 |
| SchI | GAGTC | 2 cut(s) | 83, 248 |
| ScrFI | CCNGG | 1 cut(s) | 30 |
| SetI | ASST | 4 cut(s) | 38, 91, 132, 373 |
| SfaNI | GCATC | 1 cut(s) | 151 |
| SfcI | CTRYAG | 1 cut(s) | 276 |
| SgeI | CNNG | 9 cut(s) | 41, 42, 51, 81, 85, 143, 165, 229, 278 |
| Sse9I | AATT | 1 cut(s) | 288 |
| SspMI | CTAG | 1 cut(s) | 153 |
| StyD4I | CCNGG | 1 cut(s) | 28 |
| TaaI | ACNGT | 2 cut(s) | 168, 384 |
| TasI | AATT | 1 cut(s) | 288 |
| TfiI | GAWTC | 2 cut(s) | 25, 233 |
| TscAI | CASTG | 1 cut(s) | 273 |
| TseI | GCWGC | 3 cut(s) | 86, 275, 371 |
| TspRI | CASTG | 1 cut(s) | 273 |
| XapI | RAATTY | 1 cut(s) | 288 |
| XspI | CTAG | 1 cut(s) | 153 |