Transducin family protein WD-40 repeat family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WD40_Prp19 | PF24814 | 21 - 163 | 4.9e-12 | Prp19 WD40 domain |
| WD40_CDC20-Fz | PF24807 | 22 - 152 | 2.8e-12 | CDC20/Fizzy WD40 domain |
| Beta-prop_EML | PF23409 | 23 - 173 | 3.1e-07 | Echinoderm microtubule-associated protein first beta-propeller |
| Beta-prop_WDR3_1st | PF25173 | 25 - 181 | 3.7e-18 | WDR3 first beta-propeller domain |
| Beta-prop_WDR5 | PF25175 | 26 - 235 | 1.2e-19 | WDR5 beta-propeller domain |
| WDR55 | PF24796 | 26 - 230 | 2.3e-17 | WDR55 |
| Beta-prop_WDR3_2nd | PF25172 | 28 - 180 | 4.1e-10 | WDR3 second beta-propeller domain |
| WD40_Gbeta | PF25391 | 40 - 146 | 1.1e-07 | G protein beta WD-40 repeat protein |
| Beta-prop_THOC3 | PF25174 | 71 - 307 | 9.5e-32 | THOC3 beta-propeller domain |
| EIF3I | PF24805 | 71 - 284 | 5.4e-06 | EIF3I |
| WD40_WDHD1_1st | PF24817 | 72 - 159 | 8.7e-10 | WDHD1 first WD40 domain |
| WD40 | PF00400 | 112 - 142 | 4.6e-06 | WD domain, G-beta repeat |
| Beta-prop_EML_2 | PF23414 | 119 - 234 | 2.2e-08 | Echinoderm microtubule-associated protein second beta-propeller |
| WD40_WDHD1_1st | PF24817 | 154 - 288 | 2.9e-08 | WDHD1 first WD40 domain |
| WD40_Prp19 | PF24814 | 164 - 306 | 2.4e-12 | Prp19 WD40 domain |
| Beta-prop_WDR3_1st | PF25173 | 171 - 302 | 5.2e-06 | WDR3 first beta-propeller domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 999 |
| Acc36I | ACCTGC | 1 cut(s) | 999 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 132, 1028 |
| AciI | CCGC | 4 cut(s) | 27, 267, 658, 917 |
| AclWI | GGATC | 3 cut(s) | 361, 374, 907 |
| AcoI | YGGCCR | 1 cut(s) | 123 |
| AcsI | RAATTY | 1 cut(s) | 757 |
| AcuI | CTGAAG | 1 cut(s) | 608 |
| AfaI | GTAC | 3 cut(s) | 447, 593, 771 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 132, 773, 855, 997, 1028 |
| AflII | CTTAAG | 1 cut(s) | 91 |
| AgsI | TTSAA | 6 cut(s) | 415, 541, 648, 712, 811, 889 |
| AluBI | AGCT | 5 cut(s) | 90, 110, 356, 460, 882 |
| AluI | AGCT | 5 cut(s) | 90, 110, 356, 460, 882 |
| Alw21I | GWGCWC | 1 cut(s) | 193 |
| AlwI | GGATC | 3 cut(s) | 361, 374, 907 |
| Ama87I | CYCGRG | 1 cut(s) | 370 |
| AoxI | GGCC | 4 cut(s) | 123, 296, 846, 1014 |
| ApeKI | GCWGC | 3 cut(s) | 353, 879, 975 |
| ApoI | RAATTY | 1 cut(s) | 757 |
| AspLEI | GCGC | 1 cut(s) | 19 |
| AspS9I | GGNCC | 2 cut(s) | 297, 344 |
| AsuC2I | CCSGG | 4 cut(s) | 371, 372, 767, 959 |
| AsuHPI | GGTGA | 2 cut(s) | 60, 157 |
| AvaI | CYCGRG | 1 cut(s) | 370 |
| AvaII | GGWCC | 1 cut(s) | 344 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 575, 608 |
| BalI | TGGCCA | 1 cut(s) | 125 |
| BamHI | GGATCC | 1 cut(s) | 366 |
| BbsI | GAAGAC | 1 cut(s) | 529 |
| Bbv12I | GWGCWC | 1 cut(s) | 193 |
| BbvI | GCAGC | 3 cut(s) | 365, 891, 987 |
| BccI | CCATC | 6 cut(s) | 73, 242, 496, 719, 794, 890 |
| BclI | TGATCA | 2 cut(s) | 214, 622 |
| BcnI | CCSGG | 4 cut(s) | 371, 372, 767, 959 |
| BfaI | CTAG | 1 cut(s) | 182 |
| BfrI | CTTAAG | 1 cut(s) | 91 |
| BfuAI | ACCTGC | 1 cut(s) | 999 |
| BisI | GCNGC | 4 cut(s) | 354, 880, 918, 976 |
| BlsI | GCNGC | 4 cut(s) | 355, 881, 919, 977 |
| Bme1390I | CCNGG | 4 cut(s) | 371, 372, 767, 959 |
| Bme18I | GGWCC | 1 cut(s) | 344 |
| BmeT110I | CYCGRG | 1 cut(s) | 370 |
| BmgT120I | GGNCC | 2 cut(s) | 297, 344 |
| BmiI | GGNNCC | 4 cut(s) | 175, 253, 345, 368 |
| BmrFI | CCNGG | 4 cut(s) | 371, 372, 767, 959 |
| BmsI | GCATC | 1 cut(s) | 209 |
| BpiI | GAAGAC | 1 cut(s) | 529 |
| BpmI | CTGGAG | 1 cut(s) | 952 |
| BpuEI | CTTGAG | 1 cut(s) | 827 |
| BpuMI | CCSGG | 4 cut(s) | 371, 372, 767, 959 |
| Bsa29I | ATCGAT | 1 cut(s) | 902 |
| BsaBI | GATNNNNATC | 1 cut(s) | 525 |
| BsaJI | CCNNGG | 1 cut(s) | 370 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 925, 955 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 132, 773, 855, 997, 1028 |
| Bse118I | RCCGGY | 3 cut(s) | 70, 220, 1037 |
| Bse1I | ACTGG | 3 cut(s) | 186, 397, 935 |
| Bse8I | GATNNNNATC | 1 cut(s) | 525 |
| BseCI | ATCGAT | 1 cut(s) | 902 |
| BseDI | CCNNGG | 1 cut(s) | 370 |
| BseGI | GGATG | 3 cut(s) | 278, 493, 685 |
| BseJI | GATNNNNATC | 1 cut(s) | 525 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 132, 773, 855, 997, 1028 |
| BseMII | CTCAG | 2 cut(s) | 552, 569 |
| BseNI | ACTGG | 3 cut(s) | 186, 397, 935 |
| BseXI | GCAGC | 3 cut(s) | 365, 891, 987 |
| BseYI | CCCAGC | 1 cut(s) | 791 |
| BsgI | GTGCAG | 1 cut(s) | 963 |
| BshFI | GGCC | 4 cut(s) | 125, 298, 848, 1016 |
| BshVI | ATCGAT | 1 cut(s) | 902 |
| BsiHKAI | GWGCWC | 1 cut(s) | 193 |
| BsiHKCI | CYCGRG | 1 cut(s) | 370 |
| BsiSI | CCGG | 6 cut(s) | 71, 221, 371, 767, 959, 1038 |
| BslFI | GGGAC | 4 cut(s) | 149, 437, 526, 833 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 132, 773, 855, 997, 1028 |
| BsmFI | GGGAC | 4 cut(s) | 149, 437, 526, 833 |
| BsnI | GGCC | 4 cut(s) | 125, 298, 848, 1016 |
| BsoBI | CYCGRG | 1 cut(s) | 370 |
| Bsp1286I | GDGCHC | 1 cut(s) | 193 |
| Bsp1407I | TGTACA | 1 cut(s) | 445 |
| Bsp143I | GATC | 4 cut(s) | 214, 366, 622, 899 |
| BspACI | CCGC | 4 cut(s) | 27, 267, 658, 917 |
| BspANI | GGCC | 4 cut(s) | 125, 298, 848, 1016 |
| BspCNI | CTCAG | 2 cut(s) | 553, 568 |
| BspDI | ATCGAT | 1 cut(s) | 902 |
| BspLI | GGNNCC | 4 cut(s) | 175, 253, 345, 368 |
| BspMI | ACCTGC | 1 cut(s) | 999 |
| BspPI | GGATC | 3 cut(s) | 361, 374, 907 |
| BspTI | CTTAAG | 1 cut(s) | 91 |
| BsrFI | RCCGGY | 3 cut(s) | 70, 220, 1037 |
| BsrGI | TGTACA | 1 cut(s) | 445 |
| BsrI | ACTGG | 3 cut(s) | 186, 397, 935 |
| BssAI | RCCGGY | 3 cut(s) | 70, 220, 1037 |
| BssECI | CCNNGG | 1 cut(s) | 370 |
| BssMI | GATC | 4 cut(s) | 214, 366, 622, 899 |
| Bst4CI | ACNGT | 3 cut(s) | 35, 259, 328 |
| BstAFI | CTTAAG | 1 cut(s) | 91 |
| BstAUI | TGTACA | 1 cut(s) | 445 |
| BstC8I | GCNNGC | 3 cut(s) | 21, 285, 922 |
| BstDEI | CTNAG | 2 cut(s) | 555, 561 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 995 |
| BstF5I | GGATG | 3 cut(s) | 278, 493, 685 |
| BstHHI | GCGC | 1 cut(s) | 19 |
| BstKTI | GATC | 4 cut(s) | 217, 369, 625, 902 |
| BstMBI | GATC | 4 cut(s) | 214, 366, 622, 899 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 182, 197, 359, 917 |
| BstSCI | CCNGG | 4 cut(s) | 369, 370, 765, 957 |
| BstV1I | GCAGC | 3 cut(s) | 365, 891, 987 |
| BstV2I | GAAGAC | 1 cut(s) | 529 |
| BstX2I | RGATCY | 1 cut(s) | 366 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 725 |
| BstYI | RGATCY | 1 cut(s) | 366 |
| Bsu15I | ATCGAT | 1 cut(s) | 902 |
| BsuRI | GGCC | 4 cut(s) | 125, 298, 848, 1016 |
| BsuTUI | ATCGAT | 1 cut(s) | 902 |
| BtsCI | GGATG | 3 cut(s) | 278, 493, 685 |
| BtsIMutI | CAGTG | 2 cut(s) | 193, 584 |
| BveI | ACCTGC | 1 cut(s) | 999 |
| Cac8I | GCNNGC | 3 cut(s) | 21, 285, 922 |
| CfoI | GCGC | 1 cut(s) | 19 |
| Cfr10I | RCCGGY | 3 cut(s) | 70, 220, 1037 |
| Cfr13I | GGNCC | 2 cut(s) | 297, 344 |
| Cfr9I | CCCGGG | 1 cut(s) | 370 |
| ClaI | ATCGAT | 1 cut(s) | 902 |
| Csp6I | GTAC | 3 cut(s) | 446, 592, 770 |
| CviAII | CATG | 6 cut(s) | 132, 212, 338, 773, 850, 876 |
| CviQI | GTAC | 3 cut(s) | 446, 592, 770 |
| DdeI | CTNAG | 2 cut(s) | 555, 561 |
| DpnI | GATC | 4 cut(s) | 216, 368, 624, 901 |
| DpnII | GATC | 4 cut(s) | 214, 366, 622, 899 |
| EaeI | YGGCCR | 1 cut(s) | 123 |
| Eco47I | GGWCC | 1 cut(s) | 344 |
| Eco57I | CTGAAG | 1 cut(s) | 608 |
| Eco88I | CYCGRG | 1 cut(s) | 370 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 995 |
| EcoO109I | RGGNCCY | 1 cut(s) | 344 |
| EcoT22I | ATGCAT | 2 cut(s) | 339, 913 |
| FaeI | CATG | 6 cut(s) | 135, 215, 341, 776, 853, 879 |
| FaqI | GGGAC | 4 cut(s) | 149, 437, 526, 833 |
| FatI | CATG | 6 cut(s) | 131, 211, 337, 772, 849, 875 |
| FauI | CCCGC | 1 cut(s) | 651 |
| FauNDI | CATATG | 1 cut(s) | 913 |
| FbaI | TGATCA | 2 cut(s) | 214, 622 |
| Fnu4HI | GCNGC | 4 cut(s) | 354, 880, 918, 976 |
| FokI | GGATG | 3 cut(s) | 285, 480, 692 |
| Fsp4HI | GCNGC | 4 cut(s) | 354, 880, 918, 976 |
| FspBI | CTAG | 1 cut(s) | 182 |
| GlaI | GCGC | 1 cut(s) | 18 |
| GluI | GCNGC | 4 cut(s) | 354, 880, 918, 976 |
| GsaI | CCCAGC | 1 cut(s) | 795 |
| GsuI | CTGGAG | 1 cut(s) | 952 |
| HaeIII | GGCC | 4 cut(s) | 125, 298, 848, 1016 |
| HapII | CCGG | 6 cut(s) | 71, 221, 371, 767, 959, 1038 |
| HhaI | GCGC | 1 cut(s) | 19 |
| Hin1II | CATG | 6 cut(s) | 135, 215, 341, 776, 853, 879 |
| Hin6I | GCGC | 1 cut(s) | 17 |
| HinP1I | GCGC | 1 cut(s) | 17 |
| HincII | GTYRAC | 2 cut(s) | 317, 748 |
| HindII | GTYRAC | 2 cut(s) | 317, 748 |
| HinfI | GANTC | 5 cut(s) | 77, 379, 573, 683, 840 |
| HpaII | CCGG | 6 cut(s) | 71, 221, 371, 767, 959, 1038 |
| HphI | GGTGA | 2 cut(s) | 60, 157 |
| Hpy166II | GTNNAC | 3 cut(s) | 317, 748, 833 |
| Hpy188I | TCNGA | 5 cut(s) | 501, 531, 558, 756, 799 |
| Hpy188III | TCNNGA | 3 cut(s) | 464, 511, 677 |
| Hpy8I | GTNNAC | 3 cut(s) | 317, 748, 833 |
| HpyAV | CCTTC | 1 cut(s) | 625 |
| HpyCH4III | ACNGT | 3 cut(s) | 35, 259, 328 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 182, 197, 359, 917 |
| HpyF3I | CTNAG | 2 cut(s) | 555, 561 |
| Hsp92II | CATG | 6 cut(s) | 135, 215, 341, 776, 853, 879 |
| HspAI | GCGC | 1 cut(s) | 17 |
| Ksp22I | TGATCA | 2 cut(s) | 214, 622 |
| Kzo9I | GATC | 4 cut(s) | 214, 366, 622, 899 |
| LmnI | GCTCC | 4 cut(s) | 173, 196, 933, 1031 |
| Lsp1109I | GCAGC | 3 cut(s) | 365, 891, 987 |
| LweI | GCATC | 1 cut(s) | 209 |
| MaeI | CTAG | 1 cut(s) | 182 |
| MaeIII | GTNAC | 4 cut(s) | 35, 58, 322, 607 |
| MalI | GATC | 4 cut(s) | 216, 368, 624, 901 |
| MboI | GATC | 4 cut(s) | 214, 366, 622, 899 |
| MboII | GAAGA | 1 cut(s) | 529 |
| MfeI | CAATTG | 1 cut(s) | 648 |
| MflI | RGATCY | 1 cut(s) | 366 |
| MhlI | GDGCHC | 1 cut(s) | 193 |
| MlsI | TGGCCA | 1 cut(s) | 125 |
| MluCI | AATT | 4 cut(s) | 648, 757, 811, 870 |
| MluNI | TGGCCA | 1 cut(s) | 125 |
| MlyI | GAGTC | 1 cut(s) | 834 |
| MmeI | TCCRAC | 1 cut(s) | 1009 |
| Mox20I | TGGCCA | 1 cut(s) | 125 |
| Mph1103I | ATGCAT | 2 cut(s) | 339, 913 |
| MscI | TGGCCA | 1 cut(s) | 125 |
| MseI | TTAA | 3 cut(s) | 92, 567, 1011 |
| MslI | CAYNNNNRTG | 3 cut(s) | 678, 712, 723 |
| Msp20I | TGGCCA | 1 cut(s) | 125 |
| MspCI | CTTAAG | 1 cut(s) | 91 |
| MspI | CCGG | 6 cut(s) | 71, 221, 371, 767, 959, 1038 |
| MspR9I | CCNGG | 4 cut(s) | 371, 372, 767, 959 |
| MunI | CAATTG | 1 cut(s) | 648 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 182, 197, 359, 917 |
| NciI | CCSGG | 4 cut(s) | 371, 372, 767, 959 |
| NdeI | CATATG | 1 cut(s) | 913 |
| NdeII | GATC | 4 cut(s) | 214, 366, 622, 899 |
| NlaIII | CATG | 6 cut(s) | 135, 215, 341, 776, 853, 879 |
| NlaIV | GGNNCC | 4 cut(s) | 175, 253, 345, 368 |
| NsiI | ATGCAT | 2 cut(s) | 339, 913 |
| PaqCI | CACCTGC | 1 cut(s) | 999 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 516 |
| PfeI | GAWTC | 4 cut(s) | 77, 379, 573, 683 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 132, 1028 |
| PkrI | GCNGC | 4 cut(s) | 355, 881, 919, 977 |
| PleI | GAGTC | 1 cut(s) | 834 |
| PpsI | GAGTC | 1 cut(s) | 834 |
| PpuMI | RGGWCCY | 1 cut(s) | 344 |
| Psp5II | RGGWCCY | 1 cut(s) | 344 |
| PspFI | CCCAGC | 1 cut(s) | 791 |
| PspN4I | GGNNCC | 4 cut(s) | 175, 253, 345, 368 |
| PspPI | GGNCC | 2 cut(s) | 297, 344 |
| PspPPI | RGGWCCY | 1 cut(s) | 344 |
| PsuI | RGATCY | 1 cut(s) | 366 |
| RsaI | GTAC | 3 cut(s) | 447, 593, 771 |
| RsaNI | GTAC | 3 cut(s) | 446, 592, 770 |
| RseI | CAYNNNNRTG | 3 cut(s) | 678, 712, 723 |
| SaqAI | TTAA | 3 cut(s) | 92, 567, 1011 |
| SatI | GCNGC | 4 cut(s) | 354, 880, 918, 976 |
| Sau3AI | GATC | 4 cut(s) | 214, 366, 622, 899 |
| Sau96I | GGNCC | 2 cut(s) | 297, 344 |
| SchI | GAGTC | 1 cut(s) | 834 |
| ScrFI | CCNGG | 4 cut(s) | 371, 372, 767, 959 |
| SduI | GDGCHC | 1 cut(s) | 193 |
| SfaNI | GCATC | 1 cut(s) | 209 |
| SinI | GGWCC | 1 cut(s) | 344 |
| SmaI | CCCGGG | 1 cut(s) | 372 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 678, 712, 723 |
| SmlI | CTYRAG | 2 cut(s) | 91, 842 |
| SmoI | CTYRAG | 2 cut(s) | 91, 842 |
| Sse9I | AATT | 4 cut(s) | 648, 757, 811, 870 |
| SsiI | CCGC | 4 cut(s) | 27, 267, 658, 917 |
| SspI | AATATT | 1 cut(s) | 419 |
| SspMI | CTAG | 1 cut(s) | 182 |
| StyD4I | CCNGG | 4 cut(s) | 369, 370, 765, 957 |
| TaaI | ACNGT | 3 cut(s) | 35, 259, 328 |
| TaqI | TCGA | 3 cut(s) | 86, 854, 902 |
| TasI | AATT | 4 cut(s) | 648, 757, 811, 870 |
| TatI | WGTACW | 1 cut(s) | 445 |
| TauI | GCSGC | 1 cut(s) | 920 |
| TfiI | GAWTC | 4 cut(s) | 77, 379, 573, 683 |
| Tru1I | TTAA | 3 cut(s) | 92, 567, 1011 |
| Tru9I | TTAA | 3 cut(s) | 92, 567, 1011 |
| TscAI | CASTG | 2 cut(s) | 193, 591 |
| TseI | GCWGC | 3 cut(s) | 353, 879, 975 |
| TspDTI | ATGAA | 3 cut(s) | 120, 392, 659 |
| TspMI | CCCGGG | 1 cut(s) | 370 |
| TspRI | CASTG | 2 cut(s) | 193, 591 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 132, 1028 |
| Vha464I | CTTAAG | 1 cut(s) | 91 |
| VpaK11BI | GGWCC | 1 cut(s) | 344 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 995 |
| XapI | RAATTY | 1 cut(s) | 757 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 770 |
| XmaI | CCCGGG | 1 cut(s) | 370 |
| XspI | CTAG | 1 cut(s) | 182 |
| Zsp2I | ATGCAT | 2 cut(s) | 339, 913 |