Rae1-like protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| WD40_Prp19 | PF24814 | 21 - 111 | 5e-09 | Prp19 WD40 domain |
| Beta-prop_THOC3 | PF25174 | 25 - 112 | 1.7e-09 | THOC3 beta-propeller domain |
| Beta-prop_WDR5 | PF25175 | 53 - 110 | 5.1e-06 | WDR5 beta-propeller domain |
| Beta-prop_EML_2 | PF23414 | 57 - 112 | 6.6e-06 | Echinoderm microtubule-associated protein second beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 59 |
| AciI | CCGC | 4 cut(s) | 17, 207, 335, 380 |
| AclWI | GGATC | 1 cut(s) | 70 |
| AfaI | GTAC | 1 cut(s) | 301 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 59, 142 |
| AflIII | ACRYGT | 1 cut(s) | 195 |
| AgsI | TTSAA | 2 cut(s) | 130, 450 |
| AluBI | AGCT | 1 cut(s) | 422 |
| AluI | AGCT | 1 cut(s) | 422 |
| AlwI | GGATC | 1 cut(s) | 70 |
| ApeKI | GCWGC | 2 cut(s) | 46, 383 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 265, 297 |
| BauI | CACGAG | 1 cut(s) | 441 |
| BbvCI | CCTCAGC | 1 cut(s) | 423 |
| BbvI | GCAGC | 2 cut(s) | 58, 395 |
| BccI | CCATC | 3 cut(s) | 189, 212, 308 |
| BceAI | ACGGC | 1 cut(s) | 30 |
| BisI | GCNGC | 3 cut(s) | 47, 381, 384 |
| BlsI | GCNGC | 3 cut(s) | 48, 382, 385 |
| BmiI | GGNNCC | 1 cut(s) | 319 |
| BmsI | GCATC | 1 cut(s) | 97 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 143, 175 |
| Bpu10I | CCTNAGC | 1 cut(s) | 423 |
| BpuEI | CTTGAG | 1 cut(s) | 245 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 67, 97, 343, 373 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 59, 142 |
| Bse1I | ACTGG | 1 cut(s) | 457 |
| Bse3DI | GCAATG | 2 cut(s) | 154, 273 |
| BseGI | GGATG | 2 cut(s) | 103, 181 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 59, 142 |
| BseMI | GCAATG | 2 cut(s) | 154, 273 |
| BseMII | CTCAG | 1 cut(s) | 414 |
| BseNI | ACTGG | 1 cut(s) | 457 |
| BseXI | GCAGC | 2 cut(s) | 58, 395 |
| BsgI | GTGCAG | 2 cut(s) | 298, 381 |
| BslFI | GGGAC | 2 cut(s) | 25, 251 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 59, 142 |
| BsmFI | GGGAC | 2 cut(s) | 25, 251 |
| Bsp143I | GATC | 1 cut(s) | 62 |
| BspACI | CCGC | 4 cut(s) | 17, 207, 335, 380 |
| BspCNI | CTCAG | 1 cut(s) | 415 |
| BspLI | GGNNCC | 1 cut(s) | 319 |
| BspPI | GGATC | 1 cut(s) | 70 |
| BsrDI | GCAATG | 2 cut(s) | 154, 273 |
| BsrI | ACTGG | 1 cut(s) | 457 |
| BssMI | GATC | 1 cut(s) | 62 |
| BssSI | CACGAG | 1 cut(s) | 441 |
| Bst2BI | CACGAG | 1 cut(s) | 441 |
| BstC8I | GCNNGC | 1 cut(s) | 211 |
| BstDEI | CTNAG | 1 cut(s) | 423 |
| BstF5I | GGATG | 2 cut(s) | 103, 181 |
| BstKTI | GATC | 1 cut(s) | 65 |
| BstMBI | GATC | 1 cut(s) | 62 |
| BstV1I | GCAGC | 2 cut(s) | 58, 395 |
| BstX2I | RGATCY | 1 cut(s) | 62 |
| BstYI | RGATCY | 1 cut(s) | 62 |
| BtsCI | GGATG | 2 cut(s) | 103, 181 |
| Cac8I | GCNNGC | 1 cut(s) | 211 |
| Csp6I | GTAC | 1 cut(s) | 300 |
| CviJI | RGCY | 5 cut(s) | 213, 286, 422, 434, 439 |
| CviKI_1 | RGCY | 5 cut(s) | 213, 286, 422, 434, 439 |
| CviQI | GTAC | 1 cut(s) | 300 |
| DdeI | CTNAG | 1 cut(s) | 423 |
| DpnI | GATC | 1 cut(s) | 64 |
| DpnII | GATC | 1 cut(s) | 62 |
| EciI | GGCGGA | 1 cut(s) | 32 |
| EcoT22I | ATGCAT | 1 cut(s) | 331 |
| FaiI | YATR | 8 cut(s) | 157, 290, 323, 325, 327, 331, 333, 372 |
| FaqI | GGGAC | 2 cut(s) | 25, 251 |
| FauNDI | CATATG | 1 cut(s) | 331 |
| Fnu4HI | GCNGC | 3 cut(s) | 47, 381, 384 |
| FokI | GGATG | 2 cut(s) | 110, 168 |
| Fsp4HI | GCNGC | 3 cut(s) | 47, 381, 384 |
| GluI | GCNGC | 3 cut(s) | 47, 381, 384 |
| HincII | GTYRAC | 1 cut(s) | 166 |
| HindII | GTYRAC | 1 cut(s) | 166 |
| HinfI | GANTC | 1 cut(s) | 258 |
| Hpy166II | GTNNAC | 2 cut(s) | 166, 190 |
| Hpy188I | TCNGA | 2 cut(s) | 174, 217 |
| Hpy188III | TCNNGA | 1 cut(s) | 95 |
| Hpy8I | GTNNAC | 2 cut(s) | 166, 190 |
| HpyAV | CCTTC | 1 cut(s) | 136 |
| HpyCH4IV | ACGT | 1 cut(s) | 197 |
| HpyCH4V | TGCA | 7 cut(s) | 46, 88, 271, 279, 297, 329, 362 |
| HpyF3I | CTNAG | 1 cut(s) | 423 |
| HpySE526I | ACGT | 1 cut(s) | 197 |
| Kzo9I | GATC | 1 cut(s) | 62 |
| LmnI | GCTCC | 1 cut(s) | 351 |
| LpnPI | CCDG | 7 cut(s) | 41, 80, 124, 195, 390, 401, 438 |
| Lsp1109I | GCAGC | 2 cut(s) | 58, 395 |
| LweI | GCATC | 1 cut(s) | 97 |
| MaeII | ACGT | 1 cut(s) | 197 |
| MalI | GATC | 1 cut(s) | 64 |
| MboI | GATC | 1 cut(s) | 62 |
| MflI | RGATCY | 1 cut(s) | 62 |
| MluCI | AATT | 2 cut(s) | 107, 229 |
| MlyI | GAGTC | 1 cut(s) | 252 |
| MmeI | TCCRAC | 1 cut(s) | 40 |
| MnlI | CCTC | 5 cut(s) | 64, 69, 136, 413, 418 |
| Mph1103I | ATGCAT | 1 cut(s) | 331 |
| MseI | TTAA | 2 cut(s) | 228, 306 |
| MslI | CAYNNNNRTG | 1 cut(s) | 96 |
| MspA1I | CMGCKG | 1 cut(s) | 209 |
| NdeI | CATATG | 1 cut(s) | 331 |
| NdeII | GATC | 1 cut(s) | 62 |
| NlaIV | GGNNCC | 1 cut(s) | 319 |
| NsiI | ATGCAT | 1 cut(s) | 331 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 59 |
| PkrI | GCNGC | 3 cut(s) | 48, 382, 385 |
| PleI | GAGTC | 1 cut(s) | 252 |
| PpsI | GAGTC | 1 cut(s) | 252 |
| PspN4I | GGNNCC | 1 cut(s) | 319 |
| PsuI | RGATCY | 1 cut(s) | 62 |
| RsaI | GTAC | 1 cut(s) | 301 |
| RsaNI | GTAC | 1 cut(s) | 300 |
| RseI | CAYNNNNRTG | 1 cut(s) | 96 |
| SaqAI | TTAA | 2 cut(s) | 228, 306 |
| SatI | GCNGC | 3 cut(s) | 47, 381, 384 |
| Sau3AI | GATC | 1 cut(s) | 62 |
| SchI | GAGTC | 1 cut(s) | 252 |
| SetI | ASST | 8 cut(s) | 60, 128, 200, 278, 295, 305, 424, 429 |
| SfaNI | GCATC | 1 cut(s) | 97 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 96 |
| SmlI | CTYRAG | 1 cut(s) | 260 |
| SmoI | CTYRAG | 1 cut(s) | 260 |
| Sse9I | AATT | 2 cut(s) | 107, 229 |
| SsiI | CCGC | 4 cut(s) | 17, 207, 335, 380 |
| SspI | AATATT | 1 cut(s) | 28 |
| TaiI | ACGT | 1 cut(s) | 200 |
| TasI | AATT | 2 cut(s) | 107, 229 |
| TauI | GCSGC | 1 cut(s) | 383 |
| Tru1I | TTAA | 2 cut(s) | 228, 306 |
| Tru9I | TTAA | 2 cut(s) | 228, 306 |
| TseI | GCWGC | 2 cut(s) | 46, 383 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 59 |
| Zsp2I | ATGCAT | 1 cut(s) | 331 |