Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0002117

Physical Location & Seq

Genomic Coordinates Forward (+)

19418443 .. 19422241

Gene Structure 3799 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT2G47300.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2481 bp

ATGGCTACTACTGCGAATGGAAACTCTAAGAAAAGAGATGGTGGTCTATCGTCGCTTGCCCCTCGCAAAATCAACGTGCAGAAATTCTCAGAGGCTCGAGCACCAGAGCTCGAATCTCTTCACTCCATTGTGTCTGAGCGTTTGAACAAGGACTTTCGATCAAAGAGGAATAAGAGGAGAAGGACCAATTCTTACAATAATCAACCTGCGAAGAAGCGTAATATAAAGAGGCAAAAATCACAGTCATTGATTGGTCAAGTATCAGGAGGAGACCATGAAGTAAAGATCACTAGACGAGTTAAGAGAAGAATGGAACTTAAAGGGAACCCTGAAACTGGGTTTTGTACTTCTGGTGATGGAACTAAGAGGCTGAGAACACATGTTTGGCACGCTAAACGATTCACTATGACTAAGCTTTGGGGTTTTCACCTTCCTCTTGGTTTACACGGAAGAGGAAGGGGATCTAGGGATGTCTTGAAGCAGTCTCGGCAAGGTGTTCTTGTTCATGATGCAAGCTATCACATTGCTGTGCAATTGGAGGGTCCAGAGGGCTCACTCTTATCGATATTAAATATGCTACTAGAGCCTTCTCCGTCATCTCATTCGAAGGAAGTTTTCGACTCTATTCTCACTGGCGGTAGTTATGAAAACGCCATGCTTTATCATGTCGAACCACCAGTTTCTCAGGCGATTGCTCCTGTTACTTATATGTGGAGACCTTCTAAGATACCAAAGAGAAGAAATGAGGAGAAAGGGGGTGACGGCATAGGAACTGATCTCCCAGTCTCAGATAAAGATCATGAAGACTTTCGTAAACTTTGGGTGTGGATCCATGCTTCTTCCTTCAGTGAAGGATATGCTATTCTTAAAGTAGCTTGTCAGAAACAGATGAATGAGACAGGTGTCTCAGTTGATTGCTTTTCACTCGAGGGTCAGCTTGCAAAACTTGAGATTTTTGGTTCAAAAGCATCTCATCTTCTCCAGAAGACCTTACATCCTGCTACAAGTACCTCTGAGAATCCCTCTATTCTAAGAAAGTGTTCAATGGAAAAAGCTGAGGTTAAAAACGTTGCTGATCTTTACACAGAAGAGAACGTATCATCTGGCGCTATTTTAGCACAGTTTGTCATAGATCCGCGGTTGATCCTGACTAGCCCACATGATGATAGGACAGTGTCAGTTGAAACGATCAAAACTGAGCCTACTGAGTCCGTTGAAACAACAACCAACACTGAGGCTGAAACTTTTCCTGAAGTTTTCAACTGCTTGTGGGATGCAAATAGTGAGCTGACCCCTCCCGAAGAAGAGAACATGTTGTGTTGGGAAAAGCATCAAAGTCGTATGGATTCTCTTTGCCTCGATGACCCAGCTGCTGAGGTTCCAAAGGTATCTAGTAGGCCAAGGAGTTCAAGGTCCTGTCCTTTACTGCTTCTTAAACATAAAAAACTTGGGAATGCGCCTACTGGATGGTCTCTTATTCTTCCCCTTAGTTGGATCAAAGTCTTCTGGAATGCCTTCGTCTCAAAAGGAGCTCATGCAATAGGTCAGAGGGAGAAACGCTGGGTTTCATGTGATGATGGTTTACCCTTTTTCCCATCAGATTTTCCCGACTGTAAAGCGTATTCATCTTTTACACTGAGCGAGGCTGCAGACTTGGAAGAAAAGGCACAACGTCGCCCTCCAGCCATAAGACCTTTCAGAATTCCCATTCCACCTCCATGGAATAGTATCCATGTCACCCGTTCTATTGGAGAGGGTTCCAATCAAAAGTTTTCAAGCAATGGGAGGAGTGTTGTGGAAATTTCCAGTTATGGTGGTAATCTGTTTGATGGTATCGTGGCAAGAACATCAGATTCGCTAACTACTTTTCTCCAAACATTCACAAGTGACAACATGCTTTTATTTCCTCACAACACTTCAAAACCAAGCACAGACCTTATGATGACGCTTCAAGAAGATGATAAAAAAGTAAGAGCTCAGATCCATCAGAGTAGTAACAAACTGTGCCTCGTCAGAGTTCTTCTACATGCTTTCAAGGAAGGTTCTTTCGAAGAAGGCGCGGTTGTATGTGCACCAACTCTTGCAGACATATCATTGCTAAAATCCAGCTGCAGTGAAGGAGAAGATGGGCGTGTCACAATCCCACAATCTTCTGTAAGTTCTTACTTTCAAGAACAACCTTGTGGAACCTGGGAACTAAATGTTCCTGAAGACACTCTTACAGAGCAATCTCATAGATGGCCAATCGGGTTTGTAACAACAGGATTTGTACGTGGGAGTAAAAAGCCGGCGGCCGAAGCTTTCTGTGATGCGGTGTTGTTAGGGAGACTAAGAGATGAGCAATGGAGAGACAAAGATGTAAGACGGAGGAAGAAGCAGATTTATGTTTTAGTTAGAAACCTAAGATCTTCTGCTTTTAGACTCGCACTTGCTACGATTGTCTTGGAGCAACAAGACTATTGTGATGTCCACTGCTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000171 GO:0000172 GO:0000966 GO:0001682 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004526 GO:0004540 GO:0004549 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005655 GO:0005730 GO:0005732 GO:0006139 GO:0006396 GO:0006399 GO:0006401 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010467 GO:0016070 GO:0016078 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019439 GO:0030677 GO:0030681 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0046700 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0099116 GO:0140098 GO:0140101 GO:1901360 GO:1901361 GO:1901575 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 ko03013 map03008 map03013

Pfam Domains

Protein Families

POP1 POPLD

Protein Analysis

826

Amino Acids

92.56

Weight (kDa)

8.88

Isoelectric Point (pI)

61.26

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POPLD	PF08170	322 - 398	1.8e-17	POPLD (NUC188) domain
POP1_C	PF22770	557 - 647	6.5e-06	POP1 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0002117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47300 AT2G47300 AT2G47300
fragaria_vesca	FvH4_1g27070
malus_domestica	MD17G1273000.v1.1 MD17G1275500.v1.1 MD17G1275600.v1.1 MD17G1275700.v1.1 MD17G1277400.v1.1
prunus_persica	Prupe.3G010600_v2.0.a1 Prupe.3G010600_v2.0.a1 Prupe.3G010600_v2.0.a1
pyrus_communis	pycom09g19200 pycom17g27430 pycom17g27440 pycom17g27500
rosa_chinensis	RchiOBHm_Chr3g0487391 RchiOBHm_Chr3g0487761
rosa_laevigata	RLG00000023008
rosa_multiflora	Rmu_co8087646.1_g000001 Rmu_sc0001955.1_g000003 Rmu_sc0003620.1_g000002 Rmu_sc0008132.1_g000008 Rmu_sc0009101.1_g000013 Rmu_sc0021127.1_g000002
rosa_roxburghii	Rroxscaffold_5G00333670 Rroxscaffold_6G00394510 Rroxscaffold_6G00394520 Rroxscaffold_6G00394820 Rroxscaffold_6G00394830
rosa_rugosa	Rorug03G0233600
rosa_samantha	Rh3AG281700 Rh3BG317300 Rh3BG321000 Rh3CG315400 Rh3DG313300 Rh3DG318100 Rh5DG285200
rosa_wichuraiana	Rw1G008590 Rw2G029580 Rw3G024940 Rw5G013600 Rw5G015220 Rw7G032520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	214
AccII	CGCG	2 cut(s)	1138, 2060
AciI	CCGC	6 cut(s)	636, 1136, 1138, 2060, 2291, 2312
AclI	AACGTT	1 cut(s)	1068
AclWI	GGATC	7 cut(s)	469, 823, 836, 1127, 1138, 1502, 1975
AcoI	YGGCCR	2 cut(s)	2240, 2292
AcsI	RAATTY	3 cut(s)	83, 1701, 1800
AcuI	CTGAAG	3 cut(s)	829, 1272, 2229
AfaI	GTAC	3 cut(s)	346, 1009, 2271
AfiI	CCNNNNNNNGG	2 cut(s)	335, 1491
AflIII	ACRYGT	2 cut(s)	379, 1311
AjnI	CCWGG	1 cut(s)	2189
AjuI	GAANNNNNNNTTGG	2 cut(s)	367, 399
Alw21I	GWGCWC	5 cut(s)	103, 111, 1534, 1978, 2074
Alw44I	GTGCAC	1 cut(s)	2070
AlwI	GGATC	7 cut(s)	469, 823, 836, 1127, 1138, 1502, 1975
AlwNI	CAGNNNCTG	1 cut(s)	1373
Ama87I	CYCGRG	2 cut(s)	96, 926
AoxI	GGCC	3 cut(s)	1397, 2240, 2292
ApaLI	GTGCAC	1 cut(s)	2070
ApeKI	GCWGC	3 cut(s)	1370, 1646, 2109
ApoI	RAATTY	3 cut(s)	83, 1701, 1800
Asp700I	GAANNNNTTC	5 cut(s)	117, 807, 1039, 1245, 1514
AspLEI	GCGC	3 cut(s)	1109, 1459, 2060
AspS9I	GGNCC	3 cut(s)	183, 542, 1413
AsuHPI	GGTGA	4 cut(s)	365, 419, 770, 1729
AsuII	TTCGAA	2 cut(s)	605, 2049
AvaI	CYCGRG	2 cut(s)	96, 926
AvaII	GGWCC	3 cut(s)	183, 542, 1413
BaeGI	GKGCMC	1 cut(s)	2074
BalI	TGGCCA	1 cut(s)	2242
BamHI	GGATCC	1 cut(s)	828
BanII	GRGCYC	4 cut(s)	111, 554, 1534, 1978
BbsI	GAAGAC	4 cut(s)	810, 992, 1495, 2217
Bbv12I	GWGCWC	5 cut(s)	103, 111, 1534, 1978, 2074
BbvCI	CCTCAGC	2 cut(s)	1056, 1374
BbvI	GCAGC	3 cut(s)	1357, 1633, 2096
BccI	CCATC	9 cut(s)	32, 350, 1461, 1571, 1603, 1823, 1992, 2120, 2232
BceAI	ACGGC	1 cut(s)	778
BcgI	CGANNNNNNTGC	2 cut(s)	1319, 1353
BciT130I	CCWGG	1 cut(s)	2191
BciVI	GTATCC	1 cut(s)	1739
BfaI	CTAG	5 cut(s)	291, 465, 581, 1152, 1392
BfmI	CTRYAG	2 cut(s)	1647, 2110
BfoI	RGCGCY	1 cut(s)	1110
BfuAI	ACCTGC	1 cut(s)	214
BfuI	GTATCC	1 cut(s)	1739
BglII	AGATCT	1 cut(s)	2405
BisI	GCNGC	4 cut(s)	1371, 1647, 2110, 2292
BlsI	GCNGC	4 cut(s)	1372, 1648, 2111, 2293
Bme1390I	CCNGG	1 cut(s)	2191
Bme18I	GGWCC	3 cut(s)	183, 542, 1413
BmeT110I	CYCGRG	2 cut(s)	96, 926
BmgT120I	GGNCC	3 cut(s)	183, 542, 1413
BmiI	GGNNCC	6 cut(s)	326, 543, 830, 1380, 1759, 2188
BmrFI	CCNGG	1 cut(s)	2191
BmrI	ACTGGG	2 cut(s)	345, 776
BmsI	GCATC	5 cut(s)	499, 977, 1264, 1339, 2299
BmuI	ACTGGG	2 cut(s)	345, 776
BoxI	GACNNNNGTC	1 cut(s)	902
BpiI	GAAGAC	4 cut(s)	810, 992, 1495, 2217
BplI	GAGNNNNNCTC	2 cut(s)	1007, 1039
BpmI	CTGGAG	2 cut(s)	965, 1665
Bpu10I	CCTNAGC	2 cut(s)	1056, 1374
Bpu14I	TTCGAA	2 cut(s)	605, 2049
BpuEI	CTTGAG	1 cut(s)	968
Bsa29I	ATCGAT	1 cut(s)	563
BsaAI	YACGTR	1 cut(s)	2273
BsaBI	GATNNNNATC	1 cut(s)	795
BsaI	GGTCTC	3 cut(s)	264, 709, 1476
BsaJI	CCNNGG	4 cut(s)	1136, 1400, 1718, 2190
Bsc4I	CCNNNNNNNGG	2 cut(s)	335, 1491
Bse118I	RCCGGY	1 cut(s)	2287
Bse1I	ACTGG	6 cut(s)	340, 637, 677, 782, 1468, 1806
Bse3DI	GCAATG	4 cut(s)	522, 1786, 2093, 2348
Bse8I	GATNNNNATC	1 cut(s)	795
BseBI	CCWGG	1 cut(s)	2191
BseCI	ATCGAT	1 cut(s)	563
BseDI	CCNNGG	4 cut(s)	1136, 1400, 1718, 2190
BseGI	GGATG	4 cut(s)	475, 994, 1279, 1472
BseJI	GATNNNNATC	1 cut(s)	795
BseLI	CCNNNNNNNGG	2 cut(s)	335, 1491
BseMI	GCAATG	4 cut(s)	522, 1786, 2093, 2348
BseNI	ACTGG	6 cut(s)	340, 637, 677, 782, 1468, 1806
BseRI	GAGGAG	4 cut(s)	190, 282, 761, 1801
BseSI	GKGCMC	1 cut(s)	2074
BseX3I	CGGCCG	1 cut(s)	2292
BseXI	GCAGC	3 cut(s)	1357, 1633, 2096
BseYI	CCCAGC	2 cut(s)	1366, 1560
BsgI	GTGCAG	1 cut(s)	98
Bsh1236I	CGCG	2 cut(s)	1138, 2060
Bsh1285I	CGRYCG	1 cut(s)	2295
BshFI	GGCC	3 cut(s)	1399, 2242, 2294
BshVI	ATCGAT	1 cut(s)	563
BsiEI	CGRYCG	1 cut(s)	2295
BsiHKAI	GWGCWC	5 cut(s)	103, 111, 1534, 1978, 2074
BsiHKCI	CYCGRG	2 cut(s)	96, 926
BsiSI	CCGG	1 cut(s)	2288
BslI	CCNNNNNNNGG	2 cut(s)	335, 1491
BsmBI	CGTCTC	1 cut(s)	1525
BsmI	GAATGC	2 cut(s)	1459, 1516
BsnI	GGCC	3 cut(s)	1399, 2242, 2294
Bso31I	GGTCTC	3 cut(s)	264, 709, 1476
BsoBI	CYCGRG	2 cut(s)	96, 926
Bsp119I	TTCGAA	2 cut(s)	605, 2049
Bsp1286I	GDGCHC	6 cut(s)	103, 111, 554, 1534, 1978, 2074
Bsp19I	CCATGG	1 cut(s)	1718
BspACI	CCGC	6 cut(s)	636, 1136, 1138, 2060, 2291, 2312
BspANI	GGCC	3 cut(s)	1399, 2242, 2294
BspDI	ATCGAT	1 cut(s)	563
BspFNI	CGCG	2 cut(s)	1138, 2060
BspHI	TCATGA	2 cut(s)	505, 799
BspLI	GGNNCC	6 cut(s)	326, 543, 830, 1380, 1759, 2188
BspMAI	CTGCAG	2 cut(s)	1651, 2114
BspMI	ACCTGC	1 cut(s)	214
BspPI	GGATC	7 cut(s)	469, 823, 836, 1127, 1138, 1502, 1975
BspT104I	TTCGAA	2 cut(s)	605, 2049
BspTNI	GGTCTC	3 cut(s)	264, 709, 1476
BsrDI	GCAATG	4 cut(s)	522, 1786, 2093, 2348
BsrFI	RCCGGY	1 cut(s)	2287
BsrI	ACTGG	6 cut(s)	340, 637, 677, 782, 1468, 1806
BssAI	RCCGGY	1 cut(s)	2287
BssECI	CCNNGG	4 cut(s)	1136, 1400, 1718, 2190
BssT1I	CCWWGG	2 cut(s)	1400, 1718
Bst2UI	CCWGG	1 cut(s)	2191
Bst4CI	ACNGT	5 cut(s)	243, 1122, 1174, 1613, 2004
Bst6I	CTCTTC	4 cut(s)	123, 445, 1083, 1299
BstBAI	YACGTR	1 cut(s)	2273
BstBI	TTCGAA	2 cut(s)	605, 2049
BstC8I	GCNNGC	5 cut(s)	57, 390, 514, 939, 2289
BstDSI	CCRYGG	2 cut(s)	1136, 1718
BstF5I	GGATG	4 cut(s)	475, 994, 1279, 1472
BstFNI	CGCG	2 cut(s)	1138, 2060
BstH2I	RGCGCY	1 cut(s)	1110
BstHHI	GCGC	3 cut(s)	1109, 1459, 2060
BstMCI	CGRYCG	1 cut(s)	2295
BstMWI	GCNNNNNNNGC	5 cut(s)	11, 487, 583, 1115, 2297
BstNI	CCWGG	1 cut(s)	2191
BstNSI	RCATGY	4 cut(s)	383, 1315, 1897, 2030
BstPAI	GACNNNNGTC	1 cut(s)	902
BstSCI	CCNGG	1 cut(s)	2189
BstSFI	CTRYAG	2 cut(s)	1647, 2110
BstSLI	GKGCMC	1 cut(s)	2074
BstUI	CGCG	2 cut(s)	1138, 2060
BstV1I	GCAGC	3 cut(s)	1357, 1633, 2096
BstV2I	GAAGAC	4 cut(s)	810, 992, 1495, 2217
BstX2I	RGATCY	5 cut(s)	461, 828, 1132, 1980, 2405
BstXI	CCANNNNNNTGG	1 cut(s)	1719
BstYI	RGATCY	5 cut(s)	461, 828, 1132, 1980, 2405
BstZI	CGGCCG	1 cut(s)	2292
Bsu15I	ATCGAT	1 cut(s)	563
BsuI	GTATCC	1 cut(s)	1739
BsuRI	GGCC	3 cut(s)	1399, 2242, 2294
BsuTUI	ATCGAT	1 cut(s)	563
BtgI	CCRYGG	2 cut(s)	1136, 1718
BtsCI	GGATG	4 cut(s)	475, 994, 1279, 1472
BtsI	GCAGTG	2 cut(s)	2119, 2470
BtsIMutI	CAGTG	7 cut(s)	630, 853, 1179, 1230, 1634, 2119, 2470
BveI	ACCTGC	1 cut(s)	214
Cac8I	GCNNGC	5 cut(s)	57, 390, 514, 939, 2289
CaiI	CAGNNNCTG	1 cut(s)	1373
CciI	TCATGA	2 cut(s)	505, 799
CfoI	GCGC	3 cut(s)	1109, 1459, 2060
Cfr10I	RCCGGY	1 cut(s)	2287
Cfr13I	GGNCC	3 cut(s)	183, 542, 1413
Cfr42I	CCGCGG	1 cut(s)	1139
ClaI	ATCGAT	1 cut(s)	563
CseI	GACGC	1 cut(s)	1954
Csp6I	GTAC	3 cut(s)	345, 1008, 2270
CviQI	GTAC	3 cut(s)	345, 1008, 2270
EaeI	YGGCCR	2 cut(s)	2240, 2292
EagI	CGGCCG	1 cut(s)	2292
Eam1104I	CTCTTC	4 cut(s)	123, 445, 1083, 1299
EarI	CTCTTC	4 cut(s)	123, 445, 1083, 1299
Ecl136II	GAGCTC	3 cut(s)	109, 1532, 1976
EclXI	CGGCCG	1 cut(s)	2292
Eco130I	CCWWGG	2 cut(s)	1400, 1718
Eco24I	GRGCYC	4 cut(s)	111, 554, 1534, 1978
Eco31I	GGTCTC	3 cut(s)	264, 709, 1476
Eco47I	GGWCC	3 cut(s)	183, 542, 1413
Eco52I	CGGCCG	1 cut(s)	2292
Eco53kI	GAGCTC	3 cut(s)	109, 1532, 1976
Eco57I	CTGAAG	3 cut(s)	829, 1272, 2229
Eco88I	CYCGRG	2 cut(s)	96, 926
EcoICRI	GAGCTC	3 cut(s)	109, 1532, 1976
EcoO109I	RGGNCCY	1 cut(s)	1413
EcoRI	GAATTC	1 cut(s)	1701
EcoRII	CCWGG	1 cut(s)	2189
EcoT14I	CCWWGG	2 cut(s)	1400, 1718
EcoT38I	GRGCYC	4 cut(s)	111, 554, 1534, 1978
ErhI	CCWWGG	2 cut(s)	1400, 1718
Esp3I	CGTCTC	1 cut(s)	1525
FalI	AAGNNNNNCTT	4 cut(s)	483, 515, 2202, 2234
Fnu4HI	GCNGC	4 cut(s)	1371, 1647, 2110, 2292
FokI	GGATG	4 cut(s)	482, 981, 1286, 1479
FriOI	GRGCYC	4 cut(s)	111, 554, 1534, 1978
Fsp4HI	GCNGC	4 cut(s)	1371, 1647, 2110, 2292
FspBI	CTAG	5 cut(s)	291, 465, 581, 1152, 1392
GlaI	GCGC	3 cut(s)	1108, 1458, 2059
GluI	GCNGC	4 cut(s)	1371, 1647, 2110, 2292
GsaI	CCCAGC	2 cut(s)	1370, 1564
GsuI	CTGGAG	2 cut(s)	965, 1665
HaeII	RGCGCY	1 cut(s)	1110
HaeIII	GGCC	3 cut(s)	1399, 2242, 2294
HapII	CCGG	1 cut(s)	2288
HgaI	GACGC	1 cut(s)	1954
HhaI	GCGC	3 cut(s)	1109, 1459, 2060
Hin6I	GCGC	3 cut(s)	1107, 1457, 2058
HinP1I	GCGC	3 cut(s)	1107, 1457, 2058
HindIII	AAGCTT	2 cut(s)	413, 2298
HinfI	GANTC	8 cut(s)	113, 399, 620, 1018, 1208, 1346, 1853, 2421
HpaII	CCGG	1 cut(s)	2288
HphI	GGTGA	4 cut(s)	365, 419, 770, 1729
Hpy166II	GTNNAC	5 cut(s)	443, 815, 1583, 2072, 2470
Hpy8I	GTNNAC	5 cut(s)	443, 815, 1583, 2072, 2470
Hpy99I	CGWCG	2 cut(s)	55, 1677
HpyCH4III	ACNGT	5 cut(s)	243, 1122, 1174, 1613, 2004
HpyCH4IV	ACGT	5 cut(s)	75, 1068, 1095, 1672, 2272
HpyF10VI	GCNNNNNNNGC	5 cut(s)	11, 487, 583, 1115, 2297
HpySE526I	ACGT	5 cut(s)	75, 1068, 1095, 1672, 2272
HspAI	GCGC	3 cut(s)	1107, 1457, 2058
KroI	GCCGGC	1 cut(s)	2287
KroNI	GCCGGC	1 cut(s)	2289
KspI	CCGCGG	1 cut(s)	1139
LmnI	GCTCC	3 cut(s)	700, 1529, 2446
Lsp1109I	GCAGC	3 cut(s)	1357, 1633, 2096
LweI	GCATC	5 cut(s)	499, 977, 1264, 1339, 2299
MaeI	CTAG	5 cut(s)	291, 465, 581, 1152, 1392
MaeII	ACGT	5 cut(s)	75, 1068, 1095, 1672, 2272
MaeIII	GTNAC	7 cut(s)	700, 758, 1735, 1886, 1994, 2134, 2254
MfeI	CAATTG	1 cut(s)	533
MflI	RGATCY	5 cut(s)	461, 828, 1132, 1980, 2405
MhlI	GDGCHC	6 cut(s)	103, 111, 554, 1534, 1978, 2074
MlsI	TGGCCA	1 cut(s)	2242
MluCI	AATT	5 cut(s)	83, 187, 533, 1701, 1800
MluNI	TGGCCA	1 cut(s)	2242
MlyI	GAGTC	3 cut(s)	614, 1217, 2415
MmeI	TCCRAC	1 cut(s)	1472
Mox20I	TGGCCA	1 cut(s)	2242
MroNI	GCCGGC	1 cut(s)	2287
MroXI	GAANNNNTTC	5 cut(s)	117, 807, 1039, 1245, 1514
MscI	TGGCCA	1 cut(s)	2242
MseI	TTAA	7 cut(s)	300, 318, 569, 867, 1062, 1434, 2479
MslI	CAYNNNNRTG	2 cut(s)	527, 1717
Msp20I	TGGCCA	1 cut(s)	2242
MspA1I	CMGCKG	3 cut(s)	1138, 1370, 2109
MspI	CCGG	1 cut(s)	2288
MspR9I	CCNGG	1 cut(s)	2191
MunI	CAATTG	1 cut(s)	533
Mva1269I	GAATGC	2 cut(s)	1459, 1516
MvaI	CCWGG	1 cut(s)	2191
MvnI	CGCG	2 cut(s)	1138, 2060
MwoI	GCNNNNNNNGC	5 cut(s)	11, 487, 583, 1115, 2297
NaeI	GCCGGC	1 cut(s)	2289
NcoI	CCATGG	1 cut(s)	1718
NgoMIV	GCCGGC	1 cut(s)	2287
NlaIV	GGNNCC	6 cut(s)	326, 543, 830, 1380, 1759, 2188
NmeAIII	GCCGAG	1 cut(s)	466
NmuCI	GTSAC	4 cut(s)	758, 1735, 1886, 2134
NspI	RCATGY	4 cut(s)	383, 1315, 1897, 2030
NspV	TTCGAA	2 cut(s)	605, 2049
PaeR7I	CTCGAG	2 cut(s)	96, 926
PagI	TCATGA	2 cut(s)	505, 799
PciI	ACATGT	2 cut(s)	379, 1311
PctI	GAATGC	2 cut(s)	1459, 1516
PdiI	GCCGGC	1 cut(s)	2289
PdmI	GAANNNNTTC	5 cut(s)	117, 807, 1039, 1245, 1514
PfeI	GAWTC	5 cut(s)	113, 399, 1018, 1346, 1853
PflFI	GACNNNGTC	1 cut(s)	1174
PkrI	GCNGC	4 cut(s)	1372, 1648, 2111, 2293
PleI	GAGTC	3 cut(s)	614, 1216, 2415
PpsI	GAGTC	3 cut(s)	614, 1216, 2415
Ppu21I	YACGTR	1 cut(s)	2273
PpuMI	RGGWCCY	1 cut(s)	1413
PscI	ACATGT	2 cut(s)	379, 1311
PshAI	GACNNNNGTC	1 cut(s)	902
Psp124BI	GAGCTC	3 cut(s)	111, 1534, 1978
Psp1406I	AACGTT	1 cut(s)	1068
Psp5II	RGGWCCY	1 cut(s)	1413
Psp6I	CCWGG	1 cut(s)	2189
PspFI	CCCAGC	2 cut(s)	1366, 1560
PspGI	CCWGG	1 cut(s)	2189
PspN4I	GGNNCC	6 cut(s)	326, 543, 830, 1380, 1759, 2188
PspPI	GGNCC	3 cut(s)	183, 542, 1413
PspPPI	RGGWCCY	1 cut(s)	1413
PspXI	VCTCGAGB	2 cut(s)	96, 926
PstI	CTGCAG	2 cut(s)	1651, 2114
PstNI	CAGNNNCTG	1 cut(s)	1373
PsuI	RGATCY	5 cut(s)	461, 828, 1132, 1980, 2405
PsyI	GACNNNGTC	1 cut(s)	1174
PvuII	CAGCTG	2 cut(s)	1370, 2109
RsaI	GTAC	3 cut(s)	346, 1009, 2271
RsaNI	GTAC	3 cut(s)	345, 1008, 2270
RseI	CAYNNNNRTG	2 cut(s)	527, 1717
SacI	GAGCTC	3 cut(s)	111, 1534, 1978
SacII	CCGCGG	1 cut(s)	1139
SaqAI	TTAA	7 cut(s)	300, 318, 569, 867, 1062, 1434, 2479
SatI	GCNGC	4 cut(s)	1371, 1647, 2110, 2292
Sau96I	GGNCC	3 cut(s)	183, 542, 1413
SchI	GAGTC	3 cut(s)	614, 1217, 2415
ScrFI	CCNGG	1 cut(s)	2191
SduI	GDGCHC	6 cut(s)	103, 111, 554, 1534, 1978, 2074
SfaNI	GCATC	5 cut(s)	499, 977, 1264, 1339, 2299
SfcI	CTRYAG	2 cut(s)	1647, 2110
Sfr274I	CTCGAG	2 cut(s)	96, 926
Sfr303I	CCGCGG	1 cut(s)	1139
SfuI	TTCGAA	2 cut(s)	605, 2049
SgrBI	CCGCGG	1 cut(s)	1139
SinI	GGWCC	3 cut(s)	183, 542, 1413
SlaI	CTCGAG	2 cut(s)	96, 926
SmiMI	CAYNNNNRTG	2 cut(s)	527, 1717
SmlI	CTYRAG	3 cut(s)	96, 926, 947
SmoI	CTYRAG	3 cut(s)	96, 926, 947
Sse9I	AATT	5 cut(s)	83, 187, 533, 1701, 1800
SsiI	CCGC	6 cut(s)	636, 1136, 1138, 2060, 2291, 2312
SspMI	CTAG	5 cut(s)	291, 465, 581, 1152, 1392
SstI	GAGCTC	3 cut(s)	111, 1534, 1978
StyD4I	CCNGG	1 cut(s)	2189
StyI	CCWWGG	2 cut(s)	1400, 1718
TaaI	ACNGT	5 cut(s)	243, 1122, 1174, 1613, 2004
TaiI	ACGT	5 cut(s)	78, 1071, 1098, 1675, 2275
TasI	AATT	5 cut(s)	83, 187, 533, 1701, 1800
TatI	WGTACW	1 cut(s)	344
TauI	GCSGC	1 cut(s)	2294
TfiI	GAWTC	5 cut(s)	113, 399, 1018, 1346, 1853
Tru1I	TTAA	7 cut(s)	300, 318, 569, 867, 1062, 1434, 2479
Tru9I	TTAA	7 cut(s)	300, 318, 569, 867, 1062, 1434, 2479
TscAI	CASTG	7 cut(s)	637, 853, 1179, 1237, 1641, 2119, 2477
TseFI	GTSAC	4 cut(s)	758, 1735, 1886, 2134
TseI	GCWGC	3 cut(s)	1370, 1646, 2109
Tsp45I	GTSAC	4 cut(s)	758, 1735, 1886, 2134
TspDTI	ATGAA	7 cut(s)	291, 494, 660, 816, 905, 1557, 1614
TspGWI	ACGGA	4 cut(s)	462, 582, 1201, 2380
TspRI	CASTG	7 cut(s)	637, 853, 1179, 1237, 1641, 2119, 2477
Tth111I	GACNNNGTC	1 cut(s)	1174
VneI	GTGCAC	1 cut(s)	2070
VpaK11BI	GGWCC	3 cut(s)	183, 542, 1413
XapI	RAATTY	3 cut(s)	83, 1701, 1800
XceI	RCATGY	4 cut(s)	383, 1315, 1897, 2030
XhoI	CTCGAG	2 cut(s)	96, 926
XmnI	GAANNNNTTC	5 cut(s)	117, 807, 1039, 1245, 1514
XspI	CTAG	5 cut(s)	291, 465, 581, 1152, 1392

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.