Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0002117

Physical Location & Seq

Genomic Coordinates Forward (+)

674498 .. 679274

Gene Structure 4777 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G010600.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2511 bp

ATGGCTACCGACGGATTCAGACGGCTACAGGTTTCTTCAGCTCCACCTCGAAAAATTAATGTCCAAAAATTTGCGGAATCACGAGCTCCGGAGCTTGAGACACTCCATACAATTGTATCTAATAGAGTGAACAATGATTTCCGGTCTCGGAGAAGCAAGAGAAGAAGAACCACCGCGTACGACAATCAAGCCGCTAAAAAAAGATGCAGAAAGAAGCGAAAACTTGGACTTGTTGATCAGAGCAGCAATGCTTTGCCTCCAGAGAAAGACGAAAAGAATGTTCCTCGTCGCATTCGTCGGAGAACCGAGCTTAAAATGAACCTTGAAAACGGTTTCTGCACATCAGGGGATGGCACGAAGAGGCTTAGAACACATATTTGGCATGCGAAGCGGTTCACAATGACAAAGCTTTGGGGTTATTACCTTCCCCTGGGTTTGCAGGGCAGAGGACGGGGGTCCAAAGCTGTCCTGAAGTGGTTCAAGGATGGAATGCTTGTGCATGATGCAAGCTATCATGTAGCTATCCAATTGGAGGGTCCGGAGGATTCATTACTATCAGTGTTAGAAATGGTGATGGTGCCTTCTTCCTCATCAGCTCCTTCTGTTATTTCTGGTATCATATATGACAGTGCTATGCTTCATCATTTGGGAGCACCTTTTTCAACCCCAATTGCTCCTGTGACCTATATGTGGCGGCCTTCTGGCCAACCAAGCGATGGATGTAATGGACTAGAGGGTACAGAGAACTCTTCTACCTTTCGCCAGCTTTGGGTGTGGATACATGCTTCTGTTCTCACTGAAGCCTATCATACTCTGAAATTAGCTTGCCAGAAAGAGATGGATAACAGGGGTATCTTGATTAATTGTATCTCACTTGAGGGTCAACTTGCGAAATTAGAAGTAGTGGGACTAAAAGCATTTCAACTCCTTCAAAGGACATTATACCCTACTACAAGGACTAGAGATGATTCTTGGAATTTGATGAAACATTCAGTTTCTGAGGCCAAAGATGATTCCCAATCTAAGATTATACTTGAAAAAGAGGACAGCATTCCTTCTCATGCAATCTTGTCTCTTAATGTCAAGGATCCTCGTACATTAACAGAGAAGGAAAAGATTGCATATGCTCCAGAATCAGGCTCTTCTAGTATACTAGGTGATGTTCTAGGAACTGAACGCAAAGAGCATGTTGTCTTTGGAAGATTTTCAGACGAGCCTGAAGGTAGTGGCATGCTCGCAGAAAAAAGTTTGTGGGACGTTAGCAGTGGAGTAAGTCCTCCAGTGGAAGAGGAGGTTATTTGCAAGGAAAAACATGACCAGCATAAGAATTTCCTCTGCCTCGATGATTCAAGTTCAGGGGCACTAAATACTTCAACCAAGTCTCCATGCTCAAGATCTTGCCCTATTATGCTGTTGAAAAATAATAATGGAAGGGGCTTGAATATTGGATGGTCTGTTATCCTCCCCTTAAGCTGGGTCAGGGCATTTTGGATTTCTCTTGTCTCCAAGGGGGCTCATGCAATGGGTTTGAGAGAGAAGCACTTGATTTCAAGTGAAGTGGGGTTGCCATATTTTCCTTCAGATTTTCCTGATTGCAATGCATATTTATGCCTCAAGGAAACTGAAGCTGTTGCCTCTAGTCTTAAAGAGGAACTTCGTCCTCCAGCTATAAGGCCTTTGAGGGTTCCCATTCTACCCCCATGGAACACTATCCGAGCCGCTTTAAACGAAGGATCCACTACAGTTGGAGAAGATGAAATTTTTAGGCAGGAAAATGGCGTCAGAAGCAATTCATCATCTAACTCAGACTGTGGACTTTCTGATCCTACATTAGCTGCCTGTCTAGGTAATTCATTTGATGGTTCTGTAGCACGGACGTCTGTTTCGCTGACAAAATTCTTGAATGAAATTCAAGGCTGTCATTTACGTCTATGTCCTCATGTGGCGGATAAACAGACAAGTTTTACTAAGTTTATGAGGGATGAAAGCAAGCTTGGGCTGGGCCAAAATGGGATTAACAAATTGAAGTACAATCGCAAATTATGTTTTGTTAGGGTATTACTGCATGCTTACAAGGAAGGTTTTCTTGAAGAGGGAGCAGTCGTTTGTGCACCTCAACTGACTGACATATCAATGTGGAAGAGGTCAGAGAGTTTCGATGGAGGACTTCAAATGCCTCAATCGGCTGTGACATCGTACTTCAAAGAGCAATCTTCTGGTAAGTGGGAACTCCAAATACCAGGGGACACTGTTGGTAGAGAATCTCATCGTTGGCCAATAGGCTTTGTCACCACTGGTTTTGTTCGAGGGAGCAAGAAGCCGGTAGCTGAAGCTTTTTGTGAGGCATTTGTACTTAATCGTCTTAGAGAGGAACAATGGGATTCGAAGCCAGCGAAGCGAAGACGAAAGGAAATTTATGTCCTTGTCAGGAATTTGAGATCTTCAGCATATAGACTTGCTCTTGCCACCATTGTTCTGGAACATCAAGACGAAGACGTGGAATTCATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000171 GO:0000172 GO:0000966 GO:0001682 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004526 GO:0004540 GO:0004549 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005655 GO:0005730 GO:0005732 GO:0006139 GO:0006396 GO:0006399 GO:0006401 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010467 GO:0016070 GO:0016078 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019439 GO:0030677 GO:0030681 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0046700 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0099116 GO:0140098 GO:0140101 GO:1901360 GO:1901361 GO:1901575 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 ko03013 map03008 map03013

Pfam Domains

Protein Families

POP1 POPLD

Protein Analysis

837

Amino Acids

93.64

Weight (kDa)

9.1

Isoelectric Point (pI)

57.25

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47300 AT2G47300 AT2G47300
fragaria_vesca	FvH4_1g27070
malus_domestica	MD17G1273000.v1.1 MD17G1275500.v1.1 MD17G1275600.v1.1 MD17G1275700.v1.1 MD17G1277400.v1.1
prunus_persica	Prupe.3G010600_v2.0.a1 Prupe.3G010600_v2.0.a1 Prupe.3G010600_v2.0.a1
pyrus_communis	pycom09g19200 pycom17g27430 pycom17g27440 pycom17g27500
rosa_chinensis	RchiOBHm_Chr3g0487391 RchiOBHm_Chr3g0487761
rosa_laevigata	RLG00000023008
rosa_multiflora	Rmu_co8087646.1_g000001 Rmu_sc0001955.1_g000003 Rmu_sc0003620.1_g000002 Rmu_sc0008132.1_g000008 Rmu_sc0009101.1_g000013 Rmu_sc0021127.1_g000002
rosa_roxburghii	Rroxscaffold_5G00333670 Rroxscaffold_6G00394510 Rroxscaffold_6G00394520 Rroxscaffold_6G00394820 Rroxscaffold_6G00394830
rosa_rugosa	Rorug03G0233600
rosa_samantha	Rh3AG281700 Rh3BG317300 Rh3BG321000 Rh3CG315400 Rh3DG313300 Rh3DG318100 Rh5DG285200
rosa_wichuraiana	Rw1G008590 Rw2G029580 Rw3G024940 Rw5G013600 Rw5G015220 Rw7G032520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1880
AccB1I	GGYRCC	1 cut(s)	577
AccB7I	CCANNNNNTGG	1 cut(s)	716
AccI	GTMKAC	1 cut(s)	1150
AccII	CGCG	1 cut(s)	176
AccIII	TCCGGA	2 cut(s)	88, 538
AciI	CCGC	7 cut(s)	74, 174, 192, 391, 694, 1719, 1946
AclWI	GGATC	5 cut(s)	1082, 1095, 1728, 1741, 1817
AcoI	YGGCCR	2 cut(s)	703, 2273
AcsI	RAATTY	9 cut(s)	68, 976, 1327, 1758, 1895, 1908, 2412, 2431, 2501
AcuI	CTGAAG	8 cut(s)	21, 491, 819, 1239, 1563, 1644, 2349, 2427
AcyI	GRCGYC	2 cut(s)	1779, 1877
AfaI	GTAC	6 cut(s)	179, 739, 1096, 2030, 2198, 2352
AfiI	CCNNNNNNNGG	7 cut(s)	430, 532, 690, 716, 769, 1136, 1473
AflII	CTTAAG	1 cut(s)	1468
AjiI	CACGTC	1 cut(s)	2497
AjnI	CCWGG	2 cut(s)	429, 2239
AjuI	GAANNNNNNNTTGG	4 cut(s)	361, 393, 1977, 2009
Alw21I	GWGCWC	3 cut(s)	88, 655, 2113
Alw26I	GTCTC	5 cut(s)	92, 150, 1077, 1386, 1507
Alw44I	GTGCAC	1 cut(s)	2109
AlwI	GGATC	5 cut(s)	1082, 1095, 1728, 1741, 1817
AlwNI	CAGNNNCTG	1 cut(s)	998
Aor13HI	TCCGGA	2 cut(s)	88, 538
AoxI	GGCC	6 cut(s)	695, 703, 1002, 1673, 2002, 2273
ApaLI	GTGCAC	1 cut(s)	2109
ApeKI	GCWGC	2 cut(s)	243, 1835
ApoI	RAATTY	9 cut(s)	68, 976, 1327, 1758, 1895, 1908, 2412, 2431, 2501
ArsI	GACNNNNNNTTYG	2 cut(s)	1867, 1899
AseI	ATTAAT	2 cut(s)	57, 861
Asp700I	GAANNNNTTC	5 cut(s)	392, 476, 1204, 1789, 2082
AspS9I	GGNCC	3 cut(s)	456, 536, 2002
AsuHPI	GGTGA	3 cut(s)	583, 1169, 2281
AsuII	TTCGAA	1 cut(s)	2384
AvaII	GGWCC	2 cut(s)	456, 536
BaeGI	GKGCMC	2 cut(s)	1363, 2113
BaeI	ACNNNNGTAYC	4 cut(s)	99, 132, 835, 868
BalI	TGGCCA	2 cut(s)	705, 2275
BamHI	GGATCC	2 cut(s)	1087, 1733
BanI	GGYRCC	1 cut(s)	577
BanII	GRGCYC	2 cut(s)	88, 1516
BauI	CACGAG	1 cut(s)	81
BbsI	GAAGAC	2 cut(s)	2407, 2499
Bbv12I	GWGCWC	3 cut(s)	88, 655, 2113
BbvI	GCAGC	2 cut(s)	255, 1822
BccI	CCATC	8 cut(s)	344, 479, 568, 710, 832, 1443, 1853, 2153
BceAI	ACGGC	1 cut(s)	38
BciT130I	CCWGG	2 cut(s)	431, 2241
BciVI	GTATCC	1 cut(s)	771
BclI	TGATCA	1 cut(s)	235
BcoDI	GTCTC	5 cut(s)	92, 150, 1077, 1386, 1507
BfaI	CTAG	7 cut(s)	731, 960, 1146, 1154, 1166, 1638, 1844
BfmI	CTRYAG	3 cut(s)	26, 1740, 1866
BfrI	CTTAAG	1 cut(s)	1468
BfuI	GTATCC	1 cut(s)	771
BglII	AGATCT	2 cut(s)	1394, 2438
BisI	GCNGC	5 cut(s)	192, 244, 695, 1719, 1836
BlsI	GCNGC	5 cut(s)	193, 245, 696, 1720, 1837
Bme1390I	CCNGG	2 cut(s)	431, 2241
Bme18I	GGWCC	2 cut(s)	456, 536
BmgBI	CACGTC	1 cut(s)	2497
BmgT120I	GGNCC	3 cut(s)	456, 536, 2002
BmiI	GGNNCC	6 cut(s)	457, 537, 579, 1089, 1686, 1735
BmrFI	CCNGG	2 cut(s)	431, 2241
BmsI	GCATC	2 cut(s)	194, 493
BoxI	GACNNNNGTC	1 cut(s)	454
BpiI	GAAGAC	2 cut(s)	2407, 2499
BpmI	CTGGAG	4 cut(s)	243, 1113, 1263, 1647
Bpu14I	TTCGAA	1 cut(s)	2384
BpuEI	CTTGAG	4 cut(s)	116, 896, 1375, 1598
BsaHI	GRCGYC	2 cut(s)	1779, 1877
BsaI	GGTCTC	1 cut(s)	150
BsaJI	CCNNGG	5 cut(s)	429, 430, 1506, 1700, 2240
BsaWI	WCCGGW	3 cut(s)	88, 141, 538
BsaXI	ACNNNNNCTCC	4 cut(s)	1366, 1396, 2088, 2118
Bsc4I	CCNNNNNNNGG	7 cut(s)	430, 532, 690, 716, 769, 1136, 1473
Bse118I	RCCGGY	1 cut(s)	2320
Bse1I	ACTGG	2 cut(s)	1280, 2299
Bse3DI	GCAATG	3 cut(s)	253, 1527, 1603
BseAI	TCCGGA	2 cut(s)	88, 538
BseBI	CCWGG	2 cut(s)	431, 2241
BseDI	CCNNGG	5 cut(s)	429, 430, 1506, 1700, 2240
BseGI	GGATG	5 cut(s)	355, 490, 725, 1454, 1987
BseLI	CCNNNNNNNGG	7 cut(s)	430, 532, 690, 716, 769, 1136, 1473
BseMI	GCAATG	3 cut(s)	253, 1527, 1603
BseMII	CTCAG	2 cut(s)	990, 1818
BseNI	ACTGG	2 cut(s)	1280, 2299
BseRI	GAGGAG	1 cut(s)	1304
BseSI	GKGCMC	2 cut(s)	1363, 2113
BseXI	GCAGC	2 cut(s)	255, 1822
BseYI	CCCAGC	2 cut(s)	1473, 1999
BsgI	GTGCAG	1 cut(s)	322
Bsh1236I	CGCG	1 cut(s)	176
BshFI	GGCC	6 cut(s)	697, 705, 1004, 1675, 2004, 2275
BshNI	GGYRCC	1 cut(s)	577
BsiHKAI	GWGCWC	3 cut(s)	88, 655, 2113
BsiSI	CCGG	4 cut(s)	89, 142, 539, 2321
BsiWI	CGTACG	1 cut(s)	177
BslFI	GGGAC	3 cut(s)	921, 1268, 2258
BslI	CCNNNNNNNGG	7 cut(s)	430, 532, 690, 716, 769, 1136, 1473
BsmAI	GTCTC	5 cut(s)	92, 150, 1077, 1386, 1507
BsmFI	GGGAC	3 cut(s)	921, 1268, 2258
BsmI	GAATGC	3 cut(s)	291, 495, 1050
BsnI	GGCC	6 cut(s)	697, 705, 1004, 1675, 2004, 2275
Bso31I	GGTCTC	1 cut(s)	150
Bsp119I	TTCGAA	1 cut(s)	2384
Bsp1286I	GDGCHC	5 cut(s)	88, 655, 1363, 1516, 2113
Bsp13I	TCCGGA	2 cut(s)	88, 538
Bsp143I	GATC	6 cut(s)	235, 1087, 1394, 1733, 1822, 2438
Bsp19I	CCATGG	1 cut(s)	1700
BspACI	CCGC	7 cut(s)	74, 174, 192, 391, 694, 1719, 1946
BspANI	GGCC	6 cut(s)	697, 705, 1004, 1675, 2004, 2275
BspCNI	CTCAG	2 cut(s)	991, 1817
BspEI	TCCGGA	2 cut(s)	88, 538
BspFNI	CGCG	1 cut(s)	176
BspLI	GGNNCC	6 cut(s)	457, 537, 579, 1089, 1686, 1735
BspPI	GGATC	5 cut(s)	1082, 1095, 1728, 1741, 1817
BspQI	GCTCTTC	1 cut(s)	1147
BspT104I	TTCGAA	1 cut(s)	2384
BspT107I	GGYRCC	1 cut(s)	577
BspTI	CTTAAG	1 cut(s)	1468
BspTNI	GGTCTC	1 cut(s)	150
BsrDI	GCAATG	3 cut(s)	253, 1527, 1603
BsrFI	RCCGGY	1 cut(s)	2320
BsrI	ACTGG	2 cut(s)	1280, 2299
BssAI	RCCGGY	1 cut(s)	2320
BssECI	CCNNGG	5 cut(s)	429, 430, 1506, 1700, 2240
BssMI	GATC	6 cut(s)	235, 1087, 1394, 1733, 1822, 2438
BssNAI	GTATAC	1 cut(s)	1151
BssNI	GRCGYC	2 cut(s)	1779, 1877
BssSI	CACGAG	1 cut(s)	81
BssT1I	CCWWGG	2 cut(s)	1506, 1700
Bst1107I	GTATAC	1 cut(s)	1151
Bst2BI	CACGAG	1 cut(s)	81
Bst2UI	CCWGG	2 cut(s)	431, 2241
Bst4CI	ACNGT	5 cut(s)	332, 629, 1744, 1811, 2251
Bst6I	CTCTTC	6 cut(s)	353, 754, 1147, 1281, 2085, 2135
BstACI	GRCGYC	2 cut(s)	1779, 1877
BstAFI	CTTAAG	1 cut(s)	1468
BstBI	TTCGAA	1 cut(s)	2384
BstC8I	GCNNGC	9 cut(s)	384, 508, 764, 826, 1232, 1236, 1991, 2067, 2391
BstDEI	CTNAG	6 cut(s)	365, 999, 1023, 1804, 1968, 2363
BstDSI	CCRYGG	1 cut(s)	1700
BstF5I	GGATG	5 cut(s)	355, 490, 725, 1454, 1987
BstFNI	CGCG	1 cut(s)	176
BstKTI	GATC	6 cut(s)	238, 1090, 1397, 1736, 1825, 2441
BstMAI	GTCTC	5 cut(s)	92, 150, 1077, 1386, 1507
BstMBI	GATC	6 cut(s)	235, 1087, 1394, 1733, 1822, 2438
BstMWI	GCNNNNNNNGC	4 cut(s)	388, 711, 1785, 2395
BstNI	CCWGG	2 cut(s)	431, 2241
BstNSI	RCATGY	5 cut(s)	386, 785, 1190, 1234, 2069
BstPAI	GACNNNNGTC	1 cut(s)	454
BstSCI	CCNGG	2 cut(s)	429, 2239
BstSFI	CTRYAG	3 cut(s)	26, 1740, 1866
BstSLI	GKGCMC	2 cut(s)	1363, 2113
BstUI	CGCG	1 cut(s)	176
BstV1I	GCAGC	2 cut(s)	255, 1822
BstV2I	GAAGAC	2 cut(s)	2407, 2499
BstX2I	RGATCY	4 cut(s)	1087, 1394, 1733, 2438
BstXI	CCANNNNNNTGG	1 cut(s)	2476
BstYI	RGATCY	4 cut(s)	1087, 1394, 1733, 2438
BstZ17I	GTATAC	1 cut(s)	1151
BsuI	GTATCC	1 cut(s)	771
BsuRI	GGCC	6 cut(s)	697, 705, 1004, 1675, 2004, 2275
BtgI	CCRYGG	1 cut(s)	1700
BtgZI	GCGATG	1 cut(s)	729
BtrI	CACGTC	1 cut(s)	2497
BtsCI	GGATG	5 cut(s)	355, 490, 725, 1454, 1987
BtsI	GCAGTG	1 cut(s)	1270
BtsIMutI	CAGTG	7 cut(s)	564, 634, 795, 1270, 1287, 2247, 2292
Cac8I	GCNNGC	9 cut(s)	384, 508, 764, 826, 1232, 1236, 1991, 2067, 2391
CaiI	CAGNNNCTG	1 cut(s)	998
Cfr10I	RCCGGY	1 cut(s)	2320
Cfr13I	GGNCC	3 cut(s)	456, 536, 2002
CseI	GACGC	1 cut(s)	1768
Csp6I	GTAC	6 cut(s)	178, 738, 1095, 2029, 2197, 2351
CspCI	CAANNNNNGTGG	6 cut(s)	1539, 1574, 1726, 1761, 2281, 2316
CviQI	GTAC	6 cut(s)	178, 738, 1095, 2029, 2197, 2351
DdeI	CTNAG	6 cut(s)	365, 999, 1023, 1804, 1968, 2363
DpnI	GATC	6 cut(s)	237, 1089, 1396, 1735, 1824, 2440
DpnII	GATC	6 cut(s)	235, 1087, 1394, 1733, 1822, 2438
DraI	TTTAAA	1 cut(s)	1725
EaeI	YGGCCR	2 cut(s)	703, 2273
Eam1104I	CTCTTC	6 cut(s)	353, 754, 1147, 1281, 2085, 2135
EarI	CTCTTC	6 cut(s)	353, 754, 1147, 1281, 2085, 2135
EciI	GGCGGA	1 cut(s)	1961
Ecl136II	GAGCTC	1 cut(s)	86
Eco130I	CCWWGG	2 cut(s)	1506, 1700
Eco147I	AGGCCT	1 cut(s)	1675
Eco24I	GRGCYC	2 cut(s)	88, 1516
Eco31I	GGTCTC	1 cut(s)	150
Eco47I	GGWCC	2 cut(s)	456, 536
Eco53kI	GAGCTC	1 cut(s)	86
Eco57I	CTGAAG	8 cut(s)	21, 491, 819, 1239, 1563, 1644, 2349, 2427
EcoICRI	GAGCTC	1 cut(s)	86
EcoRI	GAATTC	1 cut(s)	2501
EcoRII	CCWGG	2 cut(s)	429, 2239
EcoT14I	CCWWGG	2 cut(s)	1506, 1700
EcoT22I	ATGCAT	1 cut(s)	1603
EcoT38I	GRGCYC	2 cut(s)	88, 1516
ErhI	CCWWGG	2 cut(s)	1506, 1700
FalI	AAGNNNNNCTT	4 cut(s)	1638, 1670, 2070, 2102
FaqI	GGGAC	3 cut(s)	921, 1268, 2258
FauNDI	CATATG	1 cut(s)	1123
FbaI	TGATCA	1 cut(s)	235
FblI	GTMKAC	1 cut(s)	1150
Fnu4HI	GCNGC	5 cut(s)	192, 244, 695, 1719, 1836
FokI	GGATG	5 cut(s)	362, 497, 732, 1461, 1994
FriOI	GRGCYC	2 cut(s)	88, 1516
Fsp4HI	GCNGC	5 cut(s)	192, 244, 695, 1719, 1836
FspBI	CTAG	7 cut(s)	731, 960, 1146, 1154, 1166, 1638, 1844
GluI	GCNGC	5 cut(s)	192, 244, 695, 1719, 1836
GsaI	CCCAGC	2 cut(s)	1477, 2003
GsuI	CTGGAG	4 cut(s)	243, 1113, 1263, 1647
HaeIII	GGCC	6 cut(s)	697, 705, 1004, 1675, 2004, 2275
HapII	CCGG	4 cut(s)	89, 142, 539, 2321
HgaI	GACGC	1 cut(s)	1768
Hin1I	GRCGYC	2 cut(s)	1779, 1877
HincII	GTYRAC	1 cut(s)	884
HindII	GTYRAC	1 cut(s)	884
HindIII	AAGCTT	3 cut(s)	407, 1991, 2331
HinfI	GANTC	9 cut(s)	15, 77, 545, 968, 1013, 1133, 1346, 2261, 2381
HpaII	CCGG	4 cut(s)	89, 142, 539, 2321
HphI	GGTGA	3 cut(s)	583, 1169, 2281
Hpy166II	GTNNAC	6 cut(s)	130, 396, 884, 1151, 1814, 2111
Hpy8I	GTNNAC	6 cut(s)	130, 396, 884, 1151, 1814, 2111
Hpy99I	CGWCG	3 cut(s)	14, 291, 300
HpyCH4III	ACNGT	5 cut(s)	332, 629, 1744, 1811, 2251
HpyCH4IV	ACGT	4 cut(s)	1257, 1877, 1927, 2496
HpyF10VI	GCNNNNNNNGC	4 cut(s)	388, 711, 1785, 2395
HpyF3I	CTNAG	6 cut(s)	365, 999, 1023, 1804, 1968, 2363
HpySE526I	ACGT	4 cut(s)	1257, 1877, 1927, 2496
Hsp92I	GRCGYC	2 cut(s)	1779, 1877
Kpn2I	TCCGGA	2 cut(s)	88, 538
Ksp22I	TGATCA	1 cut(s)	235
Kzo9I	GATC	6 cut(s)	235, 1087, 1394, 1733, 1822, 2438
LguI	GCTCTTC	1 cut(s)	1147
LmnI	GCTCC	9 cut(s)	46, 91, 91, 601, 650, 679, 1132, 2096, 2310
Lsp1109I	GCAGC	2 cut(s)	255, 1822
LweI	GCATC	2 cut(s)	194, 493
MaeI	CTAG	7 cut(s)	731, 960, 1146, 1154, 1166, 1638, 1844
MaeII	ACGT	4 cut(s)	1257, 1877, 1927, 2496
MaeIII	GTNAC	3 cut(s)	679, 2188, 2287
MalI	GATC	6 cut(s)	237, 1089, 1396, 1735, 1824, 2440
MboI	GATC	6 cut(s)	235, 1087, 1394, 1733, 1822, 2438
MfeI	CAATTG	3 cut(s)	111, 527, 669
MflI	RGATCY	4 cut(s)	1087, 1394, 1733, 2438
MhlI	GDGCHC	5 cut(s)	88, 655, 1363, 1516, 2113
MlsI	TGGCCA	2 cut(s)	705, 2275
MluNI	TGGCCA	2 cut(s)	705, 2275
MmeI	TCCRAC	2 cut(s)	278, 1726
Mox20I	TGGCCA	2 cut(s)	705, 2275
Mph1103I	ATGCAT	1 cut(s)	1603
MroI	TCCGGA	2 cut(s)	88, 538
MroXI	GAANNNNTTC	5 cut(s)	392, 476, 1204, 1789, 2082
MscI	TGGCCA	2 cut(s)	705, 2275
MslI	CAYNNNNRTG	2 cut(s)	1606, 2132
Msp20I	TGGCCA	2 cut(s)	705, 2275
MspCI	CTTAAG	1 cut(s)	1468
MspI	CCGG	4 cut(s)	89, 142, 539, 2321
MspR9I	CCNGG	2 cut(s)	431, 2241
MunI	CAATTG	3 cut(s)	111, 527, 669
Mva1269I	GAATGC	3 cut(s)	291, 495, 1050
MvaI	CCWGG	2 cut(s)	431, 2241
MvnI	CGCG	1 cut(s)	176
MwoI	GCNNNNNNNGC	4 cut(s)	388, 711, 1785, 2395
NcoI	CCATGG	1 cut(s)	1700
NdeI	CATATG	1 cut(s)	1123
NdeII	GATC	6 cut(s)	235, 1087, 1394, 1733, 1822, 2438
NlaIV	GGNNCC	6 cut(s)	457, 537, 579, 1089, 1686, 1735
NmuCI	GTSAC	3 cut(s)	679, 2188, 2287
NsiI	ATGCAT	1 cut(s)	1603
NspI	RCATGY	5 cut(s)	386, 785, 1190, 1234, 2069
NspV	TTCGAA	1 cut(s)	2384
PaeI	GCATGC	3 cut(s)	386, 1234, 2069
PasI	CCCWGGG	1 cut(s)	430
PceI	AGGCCT	1 cut(s)	1675
PciSI	GCTCTTC	1 cut(s)	1147
PcsI	WCGNNNNNNNCGW	2 cut(s)	292, 2390
PctI	GAATGC	3 cut(s)	291, 495, 1050
PdmI	GAANNNNTTC	5 cut(s)	392, 476, 1204, 1789, 2082
PfeI	GAWTC	9 cut(s)	15, 77, 545, 968, 1013, 1133, 1346, 2261, 2381
Pfl23II	CGTACG	1 cut(s)	177
PflMI	CCANNNNNTGG	1 cut(s)	716
PkrI	GCNGC	5 cut(s)	193, 245, 696, 1720, 1837
PshAI	GACNNNNGTC	1 cut(s)	454
PshBI	ATTAAT	2 cut(s)	57, 861
Psp124BI	GAGCTC	1 cut(s)	88
Psp6I	CCWGG	2 cut(s)	429, 2239
PspFI	CCCAGC	2 cut(s)	1473, 1999
PspGI	CCWGG	2 cut(s)	429, 2239
PspLI	CGTACG	1 cut(s)	177
PspN4I	GGNNCC	6 cut(s)	457, 537, 579, 1089, 1686, 1735
PspPI	GGNCC	3 cut(s)	456, 536, 2002
PsrI	GAACNNNNNNTAC	2 cut(s)	2220, 2252
PstNI	CAGNNNCTG	1 cut(s)	998
PsuI	RGATCY	4 cut(s)	1087, 1394, 1733, 2438
RsaI	GTAC	6 cut(s)	179, 739, 1096, 2030, 2198, 2352
RsaNI	GTAC	6 cut(s)	178, 738, 1095, 2029, 2197, 2351
RseI	CAYNNNNRTG	2 cut(s)	1606, 2132
SacI	GAGCTC	1 cut(s)	88
SapI	GCTCTTC	1 cut(s)	1147
SatI	GCNGC	5 cut(s)	192, 244, 695, 1719, 1836
Sau3AI	GATC	6 cut(s)	235, 1087, 1394, 1733, 1822, 2438
Sau96I	GGNCC	3 cut(s)	456, 536, 2002
ScrFI	CCNGG	2 cut(s)	431, 2241
SduI	GDGCHC	5 cut(s)	88, 655, 1363, 1516, 2113
SfaNI	GCATC	2 cut(s)	194, 493
SfcI	CTRYAG	3 cut(s)	26, 1740, 1866
SfuI	TTCGAA	1 cut(s)	2384
SinI	GGWCC	2 cut(s)	456, 536
SmiMI	CAYNNNNRTG	2 cut(s)	1606, 2132
SmlI	CTYRAG	5 cut(s)	95, 875, 1390, 1468, 1613
SmoI	CTYRAG	5 cut(s)	95, 875, 1390, 1468, 1613
SphI	GCATGC	3 cut(s)	386, 1234, 2069
SseBI	AGGCCT	1 cut(s)	1675
SsiI	CCGC	7 cut(s)	74, 174, 192, 391, 694, 1719, 1946
SspI	AATATT	1 cut(s)	1444
SspMI	CTAG	7 cut(s)	731, 960, 1146, 1154, 1166, 1638, 1844
SstI	GAGCTC	1 cut(s)	88
StuI	AGGCCT	1 cut(s)	1675
StyD4I	CCNGG	2 cut(s)	429, 2239
StyI	CCWWGG	2 cut(s)	1506, 1700
TaaI	ACNGT	5 cut(s)	332, 629, 1744, 1811, 2251
TaiI	ACGT	4 cut(s)	1260, 1880, 1930, 2499
TaqI	TCGA	5 cut(s)	49, 1341, 2157, 2305, 2384
TatI	WGTACW	2 cut(s)	2028, 2350
TauI	GCSGC	3 cut(s)	194, 697, 1721
TfiI	GAWTC	9 cut(s)	15, 77, 545, 968, 1013, 1133, 1346, 2261, 2381
TscAI	CASTG	7 cut(s)	564, 634, 802, 1270, 1287, 2254, 2299
TseFI	GTSAC	3 cut(s)	679, 2188, 2287
TseI	GCWGC	2 cut(s)	243, 1835
Tsp45I	GTSAC	3 cut(s)	679, 2188, 2287
TspGWI	ACGGA	2 cut(s)	27, 1888
TspRI	CASTG	7 cut(s)	564, 634, 802, 1270, 1287, 2254, 2299
Van91I	CCANNNNNTGG	1 cut(s)	716
Vha464I	CTTAAG	1 cut(s)	1468
VneI	GTGCAC	1 cut(s)	2109
VpaK11BI	GGWCC	2 cut(s)	456, 536
VspI	ATTAAT	2 cut(s)	57, 861
XapI	RAATTY	9 cut(s)	68, 976, 1327, 1758, 1895, 1908, 2412, 2431, 2501
XceI	RCATGY	5 cut(s)	386, 785, 1190, 1234, 2069
XcmI	CCANNNNNNNNNTGG	2 cut(s)	713, 2473
XmiI	GTMKAC	1 cut(s)	1150
XmnI	GAANNNNTTC	5 cut(s)	392, 476, 1204, 1789, 2082
XspI	CTAG	7 cut(s)	731, 960, 1146, 1154, 1166, 1638, 1844
ZraI	GACGTC	1 cut(s)	1878
Zsp2I	ATGCAT	1 cut(s)	1603

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.