Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0002117

Physical Location & Seq

Genomic Coordinates Reverse (-)

25639152 .. 25643280

Gene Structure 4129 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g27500.9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGTTGCCTCCAGAGAAAGATGGCAAGAAGAACGTTCCTCGTCGCATTCGTAGGAGAGCTGAGCTTAAAATGAACCTTGAAAAGGGCTTCTGCACATCAGGGGATGGTACAAAGAGGCTTAGAACACATGTTTGGCATGCGAAGCGGTTCACAATGACAAAGCTTTGGGGTTACTACCTTCCCTTGGGTTTGCAGGGCAGAGGAAGGGGGTCCAGAGCTGTCTTGAAGTGGTTCAAGGATGGAATGCTTGTTCATGATGCAAGCTATCATGCAGCTATCCAGTTGGAGGGCCCAGAGGATTCGTTACTATCAGTGTTAGGCATGGTAATGGTGTCTCCTCCGTCAACTCGTTTTGAAAATGTTTCCCGTTCTGTTATTTCGGGTCTCACATATGATAATGCTATGCTTCATTATTTGGGAGCACCTCTTTCAAAACCAATTGCTCCTGTGAACTATATGTGGCGGCCTTATGGCCAACCAAATAGAGATAATGATGCCGCTGCCTGTGAAGGTGATGAATGTAATGGACCAGAGGGTGCAAAGCACTCTTCTACTGATCGCCAGCTTTGGGTGTGGATACATGCTTCTGCTCTCTCTGAAGCTTATGACACTCTGAAATTAGCTTGCCAAAAAGAGATGGAGGGCAGGGACATCGTGATTAATTGTTTCTCACTTGAGGGTCAACTTGCAAAATTAGAATGTGTGGGATCAAAAGCATTTCAACTCCTTCAAAGGACATTAATCCCCGCTACCAAGACTAGAGATCATTCTTGGAAGTTGATGAGACATTCAGCTGCTGAGGCGGATGATGATTCCCAAACTACAATTTATCTTCAAAACGAGGAGGAAATTCCTTCTCATGCAATTTTGTCCCTTAATGTCAAGGATCCTCGCACATTGACAGAGACTGGAAACAATGCAGATGCTCAAGATTTAGGTTCTGCTAGTATACTAGGTGATGTGCTAGGAACTGAAGACAAAGAGCATATTATCTGTGGACAATTTTCAGACAAACCTGCAGGTAGTGGCAAGATCAGAGCAAAAAATTTGTGGGATGTTAGCAGTGGAGTAAGCCCTCCAGTGGAAGAGGCTGTTCTTTGCAATGAAAGACATGACCAGAAGAGGAATTTCTTCTGCCTCGATGATTCAAGTTCAGGGGCACTAAATACTTCCTCCACGTCACAGGGTTCACGGTCTTGCCCGATTATGCTTTTGAAGAATAGTAACGGAAGAGGCTTGCATGTTGGATGGTCTGTTATACTCCCATTAAGCTGGGTCAAGGCATTTTGGATTTCTCTTGTCTCTATGGGGGCTCATGCAATGGGTTTGAGAGAGAAGCGGTGGATTTCATGTGAAGTGGGGTTGCCATATTTTCCTTCAGATTTTCCTGATTGCGATGCATATTTATGCCTCAAGGAAACTGAAGCTGCTGCCTCTAATCTTAAAGAGGAACTGCGTCCTCCAGCCATAAGACCTTTGAGGGTTCCCATTTTATCCCCATGGAATAGTATCCGTGTTGCTTTAAACGAAGAATCTAATGCAGTTGGAGATGCTGAGAGTTTTAGGCAGCAACATGGTGTCAGAAGCAATTCATCATCTAATTCAGAGTGTGGAAATTCTGATGCTACATTAGCTGGCTGTCATGGAAATTCATTTGATGGTTTTGTAGCACGGATGAGTTTTTCACTGACAAATTTCTTGAATGAAATTGAAGGCTGTCATTTACATCTGTTTCCTTATGTGGCTGATAAGGAGACAAGTTTCACGAAGTTTATGAGGGATGAAATCAAGCTTGGTCCGGGCCAAGATCAGTTTACTAGATTTAAGCACAACCGTAAATTATGTTTTGTTAGAGTATTACTCCATGCTTACAAGGAAGGTTTTCTTGAAGAGGGAGCTGTAATTTGTGCGCCTCGACTGACAGACATATCACTGTGGACCAGGTCAGAGAATTTCGATGGAGTACTTCAAATGCCTCAATCTGCTGTGGCATCGTACTTCACAGAGCAATCTTCTGGTAAGTGGGAACTCCAAATGCCAGAGGACGCTGTTCTTAGAGAAACTCATCGTTCGCCAATAGGCTTCATCACCACCGGTTTTGTTAGAGGGTGCAAGAAGCCAGTAGCAGAAGCTTTTTGCGAGGCAGTTGTACTCGCTCGTCTCAGAGAGGAACAATGGGATTCGGTGCCAGCTAAGCGAAGACGAAAGGAAATATATGTTCTAGTCAGGAATTTGAGATCTTCAGCTTATAGACTTGCTCTTGCCACCATTGTTCTGGAGCATCAGGAAGATGTCGAATTCTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000171 GO:0000172 GO:0000966 GO:0001682 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004526 GO:0004540 GO:0004549 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005655 GO:0005730 GO:0005732 GO:0006139 GO:0006396 GO:0006399 GO:0006401 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010467 GO:0016070 GO:0016078 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019439 GO:0030677 GO:0030681 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0046700 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0099116 GO:0140098 GO:0140101 GO:1901360 GO:1901361 GO:1901575 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 ko03013 map03008 map03013

Pfam Domains

Protein Families

POP1 POPLD

Protein Analysis

769

Amino Acids

85.79

Weight (kDa)

6.89

Isoelectric Point (pI)

55.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47300 AT2G47300 AT2G47300
fragaria_vesca	FvH4_1g27070
malus_domestica	MD17G1273000.v1.1 MD17G1275500.v1.1 MD17G1275600.v1.1 MD17G1275700.v1.1 MD17G1277400.v1.1
prunus_persica	Prupe.3G010600_v2.0.a1 Prupe.3G010600_v2.0.a1 Prupe.3G010600_v2.0.a1
pyrus_communis	pycom09g19200 pycom17g27430 pycom17g27440 pycom17g27500
rosa_chinensis	RchiOBHm_Chr3g0487391 RchiOBHm_Chr3g0487761
rosa_laevigata	RLG00000023008
rosa_multiflora	Rmu_co8087646.1_g000001 Rmu_sc0001955.1_g000003 Rmu_sc0003620.1_g000002 Rmu_sc0008132.1_g000008 Rmu_sc0009101.1_g000013 Rmu_sc0021127.1_g000002
rosa_roxburghii	Rroxscaffold_5G00333670 Rroxscaffold_6G00394510 Rroxscaffold_6G00394520 Rroxscaffold_6G00394820 Rroxscaffold_6G00394830
rosa_rugosa	Rorug03G0233600
rosa_samantha	Rh3AG281700 Rh3BG317300 Rh3BG321000 Rh3CG315400 Rh3DG313300 Rh3DG318100 Rh5DG285200
rosa_wichuraiana	Rw1G008590 Rw2G029580 Rw3G024940 Rw5G013600 Rw5G015220 Rw7G032520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1010, 1024
AccB1I	GGYRCC	1 cut(s)	2185
AccI	GTMKAC	1 cut(s)	949
AciI	CCGC	6 cut(s)	145, 463, 498, 747, 803, 1339
AclI	AACGTT	1 cut(s)	33
AclWI	GGATC	3 cut(s)	715, 881, 894
AcoI	YGGCCR	1 cut(s)	472
AcsI	RAATTY	9 cut(s)	849, 1045, 1126, 1615, 1648, 1693, 1951, 2230, 2297
AcuI	CTGAAG	5 cut(s)	618, 993, 1362, 1443, 2226
AfaI	GTAC	4 cut(s)	109, 1965, 1997, 2151
AfiI	CCNNNNNNNGG	5 cut(s)	82, 184, 286, 568, 1081
AflIII	ACRYGT	1 cut(s)	127
AgeI	ACCGGT	1 cut(s)	2093
AjiI	CACGTC	1 cut(s)	1179
AjnI	CCWGG	1 cut(s)	1940
AjuI	GAANNNNNNNTTGG	4 cut(s)	115, 147, 1776, 1808
AloI	GAACNNNNNNTCC	2 cut(s)	234, 266
Alw21I	GWGCWC	1 cut(s)	424
Alw26I	GTCTC	7 cut(s)	339, 389, 778, 899, 1306, 1748, 2165
AlwI	GGATC	3 cut(s)	715, 881, 894
AlwNI	CAGNNNCTG	2 cut(s)	797, 908
AoxI	GGCC	4 cut(s)	289, 464, 472, 1801
ApaI	GGGCCC	1 cut(s)	293
ApeKI	GCWGC	6 cut(s)	272, 500, 794, 1427, 1430, 1567
ApoI	RAATTY	9 cut(s)	849, 1045, 1126, 1615, 1648, 1693, 1951, 2230, 2297
AseI	ATTAAT	2 cut(s)	660, 740
AsiGI	ACCGGT	1 cut(s)	2093
Asp700I	GAANNNNTTC	5 cut(s)	146, 230, 1130, 1588, 1881
AspLEI	GCGC	1 cut(s)	1912
AspS9I	GGNCC	7 cut(s)	210, 289, 290, 527, 1796, 1801, 1938
AsuC2I	CCSGG	1 cut(s)	1800
AsuHPI	GGTGA	3 cut(s)	524, 968, 2080
AvaII	GGWCC	4 cut(s)	210, 527, 1796, 1938
BaeGI	GKGCMC	2 cut(s)	293, 1162
BalI	TGGCCA	1 cut(s)	474
BamHI	GGATCC	1 cut(s)	886
BanI	GGYRCC	1 cut(s)	2185
BanII	GRGCYC	2 cut(s)	293, 1315
BbsI	GAAGAC	2 cut(s)	981, 2206
Bbv12I	GWGCWC	1 cut(s)	424
BbvCI	CCTCAGC	1 cut(s)	798
BbvI	GCAGC	6 cut(s)	284, 487, 781, 1414, 1417, 1579
BccI	CCATC	7 cut(s)	14, 98, 233, 631, 1242, 1652, 1952
BcgI	CGANNNNNNTGC	2 cut(s)	634, 668
BciT130I	CCWGG	1 cut(s)	1942
BciVI	GTATCC	2 cut(s)	570, 1520
BcnI	CCSGG	1 cut(s)	1800
BcoDI	GTCTC	7 cut(s)	339, 389, 778, 899, 1306, 1748, 2165
BfaI	CTAG	6 cut(s)	759, 945, 953, 965, 1818, 2222
BfmI	CTRYAG	1 cut(s)	1017
BfuAI	ACCTGC	2 cut(s)	1010, 1024
BfuI	GTATCC	2 cut(s)	570, 1520
BglII	AGATCT	1 cut(s)	2237
BisI	GCNGC	8 cut(s)	273, 464, 498, 501, 795, 1428, 1431, 1568
BlpI	GCTNAGC	2 cut(s)	60, 2193
BlsI	GCNGC	8 cut(s)	274, 465, 499, 502, 796, 1429, 1432, 1569
BmcAI	AGTACT	1 cut(s)	1965
Bme1390I	CCNGG	2 cut(s)	1800, 1942
Bme18I	GGWCC	4 cut(s)	210, 527, 1796, 1938
BmgBI	CACGTC	1 cut(s)	1179
BmgT120I	GGNCC	7 cut(s)	210, 289, 290, 527, 1796, 1801, 1938
BmiI	GGNNCC	5 cut(s)	211, 291, 888, 1485, 2187
BmrFI	CCNGG	2 cut(s)	1800, 1942
BmsI	GCATC	8 cut(s)	247, 484, 913, 1387, 1540, 1612, 2000, 2290
BpiI	GAAGAC	2 cut(s)	981, 2206
BplI	GAGNNNNNCTC	2 cut(s)	1845, 1877
BpmI	CTGGAG	3 cut(s)	1062, 1446, 2297
Bpu10I	CCTNAGC	1 cut(s)	798
Bpu1102I	GCTNAGC	2 cut(s)	60, 2193
BpuEI	CTTGAG	3 cut(s)	695, 912, 1397
BpuMI	CCSGG	1 cut(s)	1800
BsaI	GGTCTC	1 cut(s)	389
BsaJI	CCNNGG	2 cut(s)	183, 1499
BsaWI	WCCGGW	1 cut(s)	2093
Bsc4I	CCNNNNNNNGG	5 cut(s)	82, 184, 286, 568, 1081
Bse118I	RCCGGY	1 cut(s)	2093
Bse1I	ACTGG	4 cut(s)	280, 913, 1079, 2120
Bse3DI	GCAATG	2 cut(s)	1108, 1326
BseBI	CCWGG	1 cut(s)	1942
BseDI	CCNNGG	2 cut(s)	183, 1499
BseGI	GGATG	7 cut(s)	109, 244, 811, 1060, 1253, 1680, 1786
BseLI	CCNNNNNNNGG	5 cut(s)	82, 184, 286, 568, 1081
BseMI	GCAATG	2 cut(s)	1108, 1326
BseMII	CTCAG	4 cut(s)	51, 789, 1545, 2176
BseNI	ACTGG	4 cut(s)	280, 913, 1079, 2120
BseRI	GAGGAG	2 cut(s)	327, 857
BseSI	GKGCMC	2 cut(s)	293, 1162
BseXI	GCAGC	6 cut(s)	284, 487, 781, 1414, 1417, 1579
BseYI	CCCAGC	1 cut(s)	1272
BsgI	GTGCAG	1 cut(s)	76
BshFI	GGCC	4 cut(s)	291, 466, 474, 1803
BshNI	GGYRCC	1 cut(s)	2185
BshTI	ACCGGT	1 cut(s)	2093
BsiHKAI	GWGCWC	1 cut(s)	424
BsiSI	CCGG	2 cut(s)	1799, 2094
BslFI	GGGAC	2 cut(s)	662, 856
BslI	CCNNNNNNNGG	5 cut(s)	82, 184, 286, 568, 1081
BsmAI	GTCTC	7 cut(s)	339, 389, 778, 899, 1306, 1748, 2165
BsmBI	CGTCTC	1 cut(s)	2165
BsmFI	GGGAC	2 cut(s)	662, 856
BsmI	GAATGC	2 cut(s)	45, 249
BsnI	GGCC	4 cut(s)	291, 466, 474, 1803
Bso31I	GGTCTC	1 cut(s)	389
Bsp120I	GGGCCC	1 cut(s)	289
Bsp1286I	GDGCHC	4 cut(s)	293, 424, 1162, 1315
Bsp143I	GATC	7 cut(s)	556, 707, 763, 886, 1032, 1807, 2237
Bsp1720I	GCTNAGC	2 cut(s)	60, 2193
Bsp19I	CCATGG	1 cut(s)	1499
BspACI	CCGC	6 cut(s)	145, 463, 498, 747, 803, 1339
BspANI	GGCC	4 cut(s)	291, 466, 474, 1803
BspCNI	CTCAG	4 cut(s)	52, 790, 1546, 2175
BspHI	TCATGA	1 cut(s)	253
BspLI	GGNNCC	5 cut(s)	211, 291, 888, 1485, 2187
BspMAI	CTGCAG	1 cut(s)	1021
BspMI	ACCTGC	2 cut(s)	1010, 1024
BspPI	GGATC	3 cut(s)	715, 881, 894
BspT107I	GGYRCC	1 cut(s)	2185
BspTNI	GGTCTC	1 cut(s)	389
BsrDI	GCAATG	2 cut(s)	1108, 1326
BsrFI	RCCGGY	1 cut(s)	2093
BsrI	ACTGG	4 cut(s)	280, 913, 1079, 2120
BssAI	RCCGGY	1 cut(s)	2093
BssECI	CCNNGG	2 cut(s)	183, 1499
BssMI	GATC	7 cut(s)	556, 707, 763, 886, 1032, 1807, 2237
BssNAI	GTATAC	1 cut(s)	950
BssT1I	CCWWGG	2 cut(s)	183, 1499
Bst1107I	GTATAC	1 cut(s)	950
Bst2UI	CCWGG	1 cut(s)	1942
Bst4CI	ACNGT	3 cut(s)	1194, 1835, 1935
Bst6I	CTCTTC	5 cut(s)	553, 1080, 1115, 1225, 1884
BstC8I	GCNNGC	7 cut(s)	138, 262, 563, 625, 1238, 1636, 2190
BstDEI	CTNAG	7 cut(s)	60, 119, 798, 1554, 2054, 2162, 2193
BstDSI	CCRYGG	1 cut(s)	1499
BstENI	CCTNNNNNAGG	1 cut(s)	80
BstF5I	GGATG	7 cut(s)	109, 244, 811, 1060, 1253, 1680, 1786
BstHHI	GCGC	1 cut(s)	1912
BstKTI	GATC	7 cut(s)	559, 710, 766, 889, 1035, 1810, 2240
BstMAI	GTCTC	7 cut(s)	339, 389, 778, 899, 1306, 1748, 2165
BstMBI	GATC	7 cut(s)	556, 707, 763, 886, 1032, 1807, 2237
BstMWI	GCNNNNNNNGC	4 cut(s)	142, 800, 1631, 2194
BstNI	CCWGG	1 cut(s)	1942
BstNSI	RCATGY	4 cut(s)	131, 140, 584, 1244
BstSCI	CCNGG	2 cut(s)	1798, 1940
BstSFI	CTRYAG	1 cut(s)	1017
BstSLI	GKGCMC	2 cut(s)	293, 1162
BstV1I	GCAGC	6 cut(s)	284, 487, 781, 1414, 1417, 1579
BstV2I	GAAGAC	2 cut(s)	981, 2206
BstX2I	RGATCY	2 cut(s)	886, 2237
BstXI	CCANNNNNNTGG	2 cut(s)	1272, 2275
BstYI	RGATCY	2 cut(s)	886, 2237
BstZ17I	GTATAC	1 cut(s)	950
BsuI	GTATCC	2 cut(s)	570, 1520
BsuRI	GGCC	4 cut(s)	291, 466, 474, 1803
BtgI	CCRYGG	1 cut(s)	1499
BtgZI	GCGATG	1 cut(s)	1410
BtrI	CACGTC	1 cut(s)	1179
BtsCI	GGATG	7 cut(s)	109, 244, 811, 1060, 1253, 1680, 1786
BtsI	GCAGTG	1 cut(s)	1069
BtsIMutI	CAGTG	5 cut(s)	318, 1069, 1086, 1685, 1931
BveI	ACCTGC	2 cut(s)	1010, 1024
Cac8I	GCNNGC	7 cut(s)	138, 262, 563, 625, 1238, 1636, 2190
CaiI	CAGNNNCTG	2 cut(s)	797, 908
CciI	TCATGA	1 cut(s)	253
CfoI	GCGC	1 cut(s)	1912
Cfr10I	RCCGGY	1 cut(s)	2093
Cfr13I	GGNCC	7 cut(s)	210, 289, 290, 527, 1796, 1801, 1938
CseI	GACGC	2 cut(s)	1445, 2054
CsiI	ACCWGGT	1 cut(s)	1940
Csp6I	GTAC	4 cut(s)	108, 1964, 1996, 2150
CspAI	ACCGGT	1 cut(s)	2093
CspCI	CAANNNNNGTGG	2 cut(s)	2080, 2115
CviQI	GTAC	4 cut(s)	108, 1964, 1996, 2150
DdeI	CTNAG	7 cut(s)	60, 119, 798, 1554, 2054, 2162, 2193
DpnI	GATC	7 cut(s)	558, 709, 765, 888, 1034, 1809, 2239
DpnII	GATC	7 cut(s)	556, 707, 763, 886, 1032, 1807, 2237
DraI	TTTAAA	1 cut(s)	1524
EaeI	YGGCCR	1 cut(s)	472
Eam1104I	CTCTTC	5 cut(s)	553, 1080, 1115, 1225, 1884
EarI	CTCTTC	5 cut(s)	553, 1080, 1115, 1225, 1884
EciI	GGCGGA	1 cut(s)	818
Eco130I	CCWWGG	2 cut(s)	183, 1499
Eco24I	GRGCYC	2 cut(s)	293, 1315
Eco31I	GGTCTC	1 cut(s)	389
Eco47I	GGWCC	4 cut(s)	210, 527, 1796, 1938
Eco57I	CTGAAG	5 cut(s)	618, 993, 1362, 1443, 2226
EcoNI	CCTNNNNNAGG	1 cut(s)	80
EcoO109I	RGGNCCY	1 cut(s)	289
EcoRI	GAATTC	1 cut(s)	2297
EcoRII	CCWGG	1 cut(s)	1940
EcoT14I	CCWWGG	2 cut(s)	183, 1499
EcoT22I	ATGCAT	1 cut(s)	1402
EcoT38I	GRGCYC	2 cut(s)	293, 1315
ErhI	CCWWGG	2 cut(s)	183, 1499
Esp3I	CGTCTC	1 cut(s)	2165
FalI	AAGNNNNNCTT	2 cut(s)	1869, 1901
FaqI	GGGAC	2 cut(s)	662, 856
FauI	CCCGC	1 cut(s)	754
FauNDI	CATATG	1 cut(s)	391
FblI	GTMKAC	1 cut(s)	949
Fnu4HI	GCNGC	8 cut(s)	273, 464, 498, 501, 795, 1428, 1431, 1568
FokI	GGATG	7 cut(s)	116, 251, 818, 1067, 1260, 1687, 1793
FriOI	GRGCYC	2 cut(s)	293, 1315
Fsp4HI	GCNGC	8 cut(s)	273, 464, 498, 501, 795, 1428, 1431, 1568
FspBI	CTAG	6 cut(s)	759, 945, 953, 965, 1818, 2222
GlaI	GCGC	1 cut(s)	1911
GluI	GCNGC	8 cut(s)	273, 464, 498, 501, 795, 1428, 1431, 1568
GsaI	CCCAGC	1 cut(s)	1276
GsuI	CTGGAG	3 cut(s)	1062, 1446, 2297
HaeIII	GGCC	4 cut(s)	291, 466, 474, 1803
HapII	CCGG	2 cut(s)	1799, 2094
HgaI	GACGC	2 cut(s)	1445, 2054
HhaI	GCGC	1 cut(s)	1912
Hin6I	GCGC	1 cut(s)	1910
HinP1I	GCGC	1 cut(s)	1910
HincII	GTYRAC	2 cut(s)	345, 683
HindII	GTYRAC	2 cut(s)	345, 683
HindIII	AAGCTT	4 cut(s)	161, 600, 1790, 2130
HinfI	GANTC	5 cut(s)	299, 812, 1145, 1532, 2180
HpaII	CCGG	2 cut(s)	1799, 2094
HphI	GGTGA	3 cut(s)	524, 968, 2080
Hpy166II	GTNNAC	9 cut(s)	150, 345, 451, 683, 950, 998, 1190, 1815, 1938
Hpy8I	GTNNAC	9 cut(s)	150, 345, 451, 683, 950, 998, 1190, 1815, 1938
Hpy99I	CGWCG	1 cut(s)	45
HpyAV	CCTTC	8 cut(s)	188, 198, 503, 737, 864, 1386, 1706, 1871
HpyCH4III	ACNGT	3 cut(s)	1194, 1835, 1935
HpyCH4IV	ACGT	2 cut(s)	33, 1178
HpyF10VI	GCNNNNNNNGC	4 cut(s)	142, 800, 1631, 2194
HpyF3I	CTNAG	7 cut(s)	60, 119, 798, 1554, 2054, 2162, 2193
HpySE526I	ACGT	2 cut(s)	33, 1178
HspAI	GCGC	1 cut(s)	1910
Kzo9I	GATC	7 cut(s)	556, 707, 763, 886, 1032, 1807, 2237
LmnI	GCTCC	4 cut(s)	419, 448, 1895, 2278
Lsp1109I	GCAGC	6 cut(s)	284, 487, 781, 1414, 1417, 1579
LweI	GCATC	8 cut(s)	247, 484, 913, 1387, 1540, 1612, 2000, 2290
MabI	ACCWGGT	1 cut(s)	1940
MaeI	CTAG	6 cut(s)	759, 945, 953, 965, 1818, 2222
MaeII	ACGT	2 cut(s)	33, 1178
MaeIII	GTNAC	4 cut(s)	170, 303, 1179, 1223
MalI	GATC	7 cut(s)	558, 709, 765, 888, 1034, 1809, 2239
MboI	GATC	7 cut(s)	556, 707, 763, 886, 1032, 1807, 2237
MfeI	CAATTG	1 cut(s)	438
MflI	RGATCY	2 cut(s)	886, 2237
MhlI	GDGCHC	4 cut(s)	293, 424, 1162, 1315
MlsI	TGGCCA	1 cut(s)	474
MluNI	TGGCCA	1 cut(s)	474
MmeI	TCCRAC	3 cut(s)	264, 1225, 1525
Mox20I	TGGCCA	1 cut(s)	474
Mph1103I	ATGCAT	1 cut(s)	1402
MroXI	GAANNNNTTC	5 cut(s)	146, 230, 1130, 1588, 1881
MscI	TGGCCA	1 cut(s)	474
MseI	TTAA	8 cut(s)	66, 660, 740, 876, 1268, 1443, 1523, 1824
MslI	CAYNNNNRTG	2 cut(s)	326, 1405
Msp20I	TGGCCA	1 cut(s)	474
MspA1I	CMGCKG	2 cut(s)	500, 794
MspI	CCGG	2 cut(s)	1799, 2094
MspR9I	CCNGG	2 cut(s)	1800, 1942
MunI	CAATTG	1 cut(s)	438
Mva1269I	GAATGC	2 cut(s)	45, 249
MvaI	CCWGG	1 cut(s)	1942
MwoI	GCNNNNNNNGC	4 cut(s)	142, 800, 1631, 2194
NciI	CCSGG	1 cut(s)	1800
NcoI	CCATGG	1 cut(s)	1499
NdeI	CATATG	1 cut(s)	391
NdeII	GATC	7 cut(s)	556, 707, 763, 886, 1032, 1807, 2237
NlaIV	GGNNCC	5 cut(s)	211, 291, 888, 1485, 2187
NmuCI	GTSAC	1 cut(s)	1179
NsiI	ATGCAT	1 cut(s)	1402
NspI	RCATGY	4 cut(s)	131, 140, 584, 1244
PaeI	GCATGC	1 cut(s)	140
PagI	TCATGA	1 cut(s)	253
PciI	ACATGT	1 cut(s)	127
PcsI	WCGNNNNNNNCGW	1 cut(s)	46
PctI	GAATGC	2 cut(s)	45, 249
PdmI	GAANNNNTTC	5 cut(s)	146, 230, 1130, 1588, 1881
PfeI	GAWTC	5 cut(s)	299, 812, 1145, 1532, 2180
PflFI	GACNNNGTC	1 cut(s)	1942
PinAI	ACCGGT	1 cut(s)	2093
PkrI	GCNGC	8 cut(s)	274, 465, 499, 502, 796, 1429, 1432, 1569
PscI	ACATGT	1 cut(s)	127
PshBI	ATTAAT	2 cut(s)	660, 740
Psp1406I	AACGTT	1 cut(s)	33
Psp6I	CCWGG	1 cut(s)	1940
PspFI	CCCAGC	1 cut(s)	1272
PspGI	CCWGG	1 cut(s)	1940
PspN4I	GGNNCC	5 cut(s)	211, 291, 888, 1485, 2187
PspOMI	GGGCCC	1 cut(s)	289
PspPI	GGNCC	7 cut(s)	210, 289, 290, 527, 1796, 1801, 1938
PstI	CTGCAG	1 cut(s)	1021
PstNI	CAGNNNCTG	2 cut(s)	797, 908
PsuI	RGATCY	2 cut(s)	886, 2237
PsyI	GACNNNGTC	1 cut(s)	1942
PvuII	CAGCTG	1 cut(s)	794
RsaI	GTAC	4 cut(s)	109, 1965, 1997, 2151
RsaNI	GTAC	4 cut(s)	108, 1964, 1996, 2150
RseI	CAYNNNNRTG	2 cut(s)	326, 1405
SaqAI	TTAA	8 cut(s)	66, 660, 740, 876, 1268, 1443, 1523, 1824
SatI	GCNGC	8 cut(s)	273, 464, 498, 501, 795, 1428, 1431, 1568
Sau3AI	GATC	7 cut(s)	556, 707, 763, 886, 1032, 1807, 2237
Sau96I	GGNCC	7 cut(s)	210, 289, 290, 527, 1796, 1801, 1938
SbfI	CCTGCAGG	1 cut(s)	1021
ScaI	AGTACT	1 cut(s)	1965
ScrFI	CCNGG	2 cut(s)	1800, 1942
SdaI	CCTGCAGG	1 cut(s)	1021
SduI	GDGCHC	4 cut(s)	293, 424, 1162, 1315
SexAI	ACCWGGT	1 cut(s)	1940
SfaNI	GCATC	8 cut(s)	247, 484, 913, 1387, 1540, 1612, 2000, 2290
SfcI	CTRYAG	1 cut(s)	1017
SinI	GGWCC	4 cut(s)	210, 527, 1796, 1938
SmiMI	CAYNNNNRTG	2 cut(s)	326, 1405
SmlI	CTYRAG	3 cut(s)	674, 927, 1412
SmoI	CTYRAG	3 cut(s)	674, 927, 1412
SphI	GCATGC	1 cut(s)	140
Sse8387I	CCTGCAGG	1 cut(s)	1021
SsiI	CCGC	6 cut(s)	145, 463, 498, 747, 803, 1339
SspMI	CTAG	6 cut(s)	759, 945, 953, 965, 1818, 2222
StyD4I	CCNGG	2 cut(s)	1798, 1940
StyI	CCWWGG	2 cut(s)	183, 1499
TaaI	ACNGT	3 cut(s)	1194, 1835, 1935
TaiI	ACGT	2 cut(s)	36, 1181
TaqI	TCGA	4 cut(s)	1140, 1915, 1956, 2295
TatI	WGTACW	2 cut(s)	1963, 2149
TauI	GCSGC	2 cut(s)	466, 500
TfiI	GAWTC	5 cut(s)	299, 812, 1145, 1532, 2180
Tru1I	TTAA	8 cut(s)	66, 660, 740, 876, 1268, 1443, 1523, 1824
Tru9I	TTAA	8 cut(s)	66, 660, 740, 876, 1268, 1443, 1523, 1824
TscAI	CASTG	5 cut(s)	318, 1069, 1086, 1692, 1938
TseFI	GTSAC	1 cut(s)	1179
TseI	GCWGC	6 cut(s)	272, 500, 794, 1427, 1430, 1567
Tsp45I	GTSAC	1 cut(s)	1179
TspGWI	ACGGA	4 cut(s)	330, 1242, 1502, 1687
TspRI	CASTG	5 cut(s)	318, 1069, 1086, 1692, 1938
Tth111I	GACNNNGTC	1 cut(s)	1942
VpaK11BI	GGWCC	4 cut(s)	210, 527, 1796, 1938
VspI	ATTAAT	2 cut(s)	660, 740
XagI	CCTNNNNNAGG	1 cut(s)	80
XapI	RAATTY	9 cut(s)	849, 1045, 1126, 1615, 1648, 1693, 1951, 2230, 2297
XceI	RCATGY	4 cut(s)	131, 140, 584, 1244
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2272
XmiI	GTMKAC	1 cut(s)	949
XmnI	GAANNNNTTC	5 cut(s)	146, 230, 1130, 1588, 1881
XspI	CTAG	6 cut(s)	759, 945, 953, 965, 1818, 2222
ZrmI	AGTACT	1 cut(s)	1965
Zsp2I	ATGCAT	1 cut(s)	1402

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.