Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001955.1

Orthogroup ID

OG0002117

Physical Location & Seq

Genomic Coordinates Reverse (-)

9314 .. 13815

Gene Structure 4502 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001955.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

atggctaccgatggatacaaacgttcgcaagtttcatcagcgcctcgaaaattaagtgtccaaaagtttgcggaagcgcgagcttcagaacttgagacgctccacacagttgtatcggaccggctgaacaatgatttccggtctcaaagaagcaagagaagaaggaccactgcttatgacaatcaagccgcaaaaaggagatgtcgaaaaaagcgaaagcacggagtaggtgatcaaagcaatgctttgcctgcagagaaagatgacaagaatgttcctcgtcgcattcgtcggagagctgagcttaaaaagaaccttcatacgggtttttgtacctcaggggatggaacaaagaggcttagaacacatgtttggcatgcgaagcggttcacaatgacaaagctttggggttattatcttcccctaggattgcagggcaggggaaggggttccagagctgtcctgaaatggttcaaagatggagtgtttgcccatgatgcaagctattatgtagctatgcaattggagggtacagaggaatcattactatcagtgttaagaatggtgttggtgccttctccattagctcgttccgaagatatttcccgttccattatttcaggggccatatatgatactgctatgcttcatcagttgggagccccatgttcaaccccaattgcacctgcaacctatatgtggcaaccctcttgccaacgggatagagataatgatgcttctgctgtctatgatggtggtgcatgtaatggtctagaggttaaagagcgctcgtctacctttcgccagctttgggtgtggatacatgcttctgctttcactgcagggtatgatactctcaaattagcttgccaaaaagagatggaagagagcggcagcatgattaattttttctcacttgagggccaactcgcgaaattagaagttatgggatcaaaagcatttcaactcctccaaagaacattgtgccctgttacaagaaaggatcatacttgggcattggagagacattcagctgctgaagctccagatgattcccaatctaagactatacttgaaaatgaggaagacattccttctcatgcagtgttgtctcttagagtcaaggatcctcgcatgttcatagagaaacgaaagactgcatgtgcttcagactcaggttctgctagtatactagctgttgaacaaggaactgaagacaaagagcatgctgtcagtggaattatttcagacaagaagaaagagttactttcctcgatggggtcagaactcgaaggtactagcatgctcgcagaaaagaatttgtgggatgttaacagtggtataagtcctccagtggaagagatggttctttgccaggaaagatatgaccagaataaaaaattcttctgccttgatgaatcaagttcaagggtaggattgccatgttttccttcggatttccctgattgcagtgcatatttatgccttaaggaaattgaaagtgccgcctccaatgttaaagaggaacttcgtcctccagcacaaagacctttgagggttcccattttacccccatggaatagtatccaagtttctttaagggaaggacccaccaaaatgcgaaatgccgaaacttttagactggaaaacggggtcagaagcaattcatcgtctaactcggagtgtgacaattatgatgttacattctgtcctggtaatttgtttgatggttttgtagcacggacatctttttcactgacaaatttcttgaatgaattccaaggctgtaatttacgcctatgtcctcatgtgaccgataagacgactagctttactaggtttatgagggatgaaagcaagcttgggcagggccaaaatgggattaccaaatttagttacaagcacaagttatgctttgtaagggtatttctccatgcttacaaagaagggttttttgaagagggagcagttgtttgtgcacctcaagtgactgacatctcactctggacaagatcagagagttttgatgcaggacttcaggttcctcaatctgctgtgacatcgtatttcaaagagcaatcttctggtaagtgggaactccaattaccggaggacactgtcagtagagaatctcatcgttggcctataggctttgtgaccactggttttgttcgagggagcaagaagacagtggcacaagctttttgtgaggcagtactacttgctcgtattagagaggaacaatgggatatgatgccagttaaacggagacggaaggaaatatatgttctcgtgaggaatttgagatcctcagcatatagactagctcttgccactatcgtcctggaagatcaggaagaagatgttgaatttctgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000171 GO:0000172 GO:0000966 GO:0001682 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004526 GO:0004540 GO:0004549 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005655 GO:0005730 GO:0005732 GO:0006139 GO:0006396 GO:0006399 GO:0006401 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010467 GO:0016070 GO:0016078 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019439 GO:0030677 GO:0030681 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0046700 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0099116 GO:0140098 GO:0140101 GO:1901360 GO:1901361 GO:1901575 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 ko03013 map03008 map03013

Pfam Domains

Protein Families

POP1 POPLD

Protein Analysis

792

Amino Acids

89.42

Weight (kDa)

8.76

Isoelectric Point (pI)

57.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47300 AT2G47300 AT2G47300
fragaria_vesca	FvH4_1g27070
malus_domestica	MD17G1273000.v1.1 MD17G1275500.v1.1 MD17G1275600.v1.1 MD17G1275700.v1.1 MD17G1277400.v1.1
prunus_persica	Prupe.3G010600_v2.0.a1 Prupe.3G010600_v2.0.a1 Prupe.3G010600_v2.0.a1
pyrus_communis	pycom09g19200 pycom17g27430 pycom17g27440 pycom17g27500
rosa_chinensis	RchiOBHm_Chr3g0487391 RchiOBHm_Chr3g0487761
rosa_laevigata	RLG00000023008
rosa_multiflora	Rmu_co8087646.1_g000001 Rmu_sc0001955.1_g000003 Rmu_sc0003620.1_g000002 Rmu_sc0008132.1_g000008 Rmu_sc0009101.1_g000013 Rmu_sc0021127.1_g000002
rosa_roxburghii	Rroxscaffold_5G00333670 Rroxscaffold_6G00394510 Rroxscaffold_6G00394520 Rroxscaffold_6G00394820 Rroxscaffold_6G00394830
rosa_rugosa	Rorug03G0233600
rosa_samantha	Rh3AG281700 Rh3BG317300 Rh3BG321000 Rh3CG315400 Rh3DG313300 Rh3DG318100 Rh5DG285200
rosa_wichuraiana	Rw1G008590 Rw2G029580 Rw3G024940 Rw5G013600 Rw5G015220 Rw7G032520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	694
Acc36I	ACCTGC	1 cut(s)	694
AccB1I	GGYRCC	1 cut(s)	571
AccBSI	CCGCTC	1 cut(s)	891
AccI	GTMKAC	2 cut(s)	794, 1189
AccII	CGCG	2 cut(s)	79, 932
AciI	CCGC	5 cut(s)	71, 189, 385, 891, 1506
AclI	AACGTT	1 cut(s)	22
AclWI	GGATC	5 cut(s)	958, 1011, 1121, 1134, 2301
AcsI	RAATTY	7 cut(s)	1318, 1400, 1762, 1775, 1889, 2299, 2369
AcuI	CTGAAG	5 cut(s)	69, 1059, 1152, 1233, 2021
AfaI	GTAC	4 cut(s)	334, 532, 1297, 2217
AfeI	AGCGCT	1 cut(s)	788
AfiI	CCNNNNNNNGG	6 cut(s)	195, 322, 699, 811, 1278, 2107
AflII	CTTAAG	1 cut(s)	1487
AflIII	ACRYGT	1 cut(s)	367
AjnI	CCWGG	3 cut(s)	1374, 1711, 2343
AjuI	GAANNNNNNNTTGG	4 cut(s)	355, 387, 1845, 1877
AloI	GAACNNNNNNTCC	2 cut(s)	2025, 2057
Alw21I	GWGCWC	1 cut(s)	1981
Alw26I	GTCTC	5 cut(s)	89, 147, 1018, 1116, 2263
Alw44I	GTGCAC	1 cut(s)	1977
AlwI	GGATC	5 cut(s)	958, 1011, 1121, 1134, 2301
AlwNI	CAGNNNCTG	2 cut(s)	1037, 1181
Aor51HI	AGCGCT	1 cut(s)	788
AoxI	GGCC	4 cut(s)	624, 922, 1870, 2141
ApaLI	GTGCAC	1 cut(s)	1977
ApeKI	GCWGC	2 cut(s)	894, 1034
ApoI	RAATTY	7 cut(s)	1318, 1400, 1762, 1775, 1889, 2299, 2369
AseI	ATTAAT	1 cut(s)	903
Asp700I	GAANNNNTTC	7 cut(s)	386, 448, 470, 1089, 1243, 1663, 1775
AspA2I	CCTAGG	1 cut(s)	424
AspLEI	GCGC	3 cut(s)	43, 79, 789
AspS9I	GGNCC	6 cut(s)	118, 165, 624, 922, 1607, 1870
AsuHPI	GGTGA	1 cut(s)	242
AvaII	GGWCC	3 cut(s)	118, 165, 1607
AvrII	CCTAGG	1 cut(s)	424
AxyI	CCTNAGG	1 cut(s)	337
BaeGI	GKGCMC	2 cut(s)	989, 1981
BaeI	ACNNNNGTAYC	4 cut(s)	7, 40, 96, 129
BamHI	GGATCC	1 cut(s)	1126
BanI	GGYRCC	1 cut(s)	571
BanII	GRGCYC	1 cut(s)	664
BauI	CACGAG	1 cut(s)	2291
BbsI	GAAGAC	3 cut(s)	1092, 1221, 2192
Bbv12I	GWGCWC	1 cut(s)	1981
BbvCI	CCTCAGC	1 cut(s)	2311
BbvI	GCAGC	2 cut(s)	906, 1021
BccI	CCATC	8 cut(s)	5, 338, 473, 746, 874, 1270, 1357, 1721
BciT130I	CCWGG	3 cut(s)	1376, 1713, 2345
BciVI	GTATCC	3 cut(s)	8, 813, 1595
BclI	TGATCA	1 cut(s)	232
BcoDI	GTCTC	5 cut(s)	89, 147, 1018, 1116, 2263
BfaI	CTAG	8 cut(s)	425, 773, 1185, 1193, 1299, 1827, 1836, 2324
BfmI	CTRYAG	3 cut(s)	252, 840, 2145
BfoI	RGCGCY	2 cut(s)	44, 790
BfrI	CTTAAG	1 cut(s)	1487
BfuAI	ACCTGC	1 cut(s)	694
BfuI	GTATCC	3 cut(s)	8, 813, 1595
BisI	GCNGC	5 cut(s)	189, 892, 895, 1035, 1506
BlnI	CCTAGG	1 cut(s)	424
BlpI	GCTNAGC	1 cut(s)	300
BlsI	GCNGC	5 cut(s)	190, 893, 896, 1036, 1507
BmcAI	AGTACT	1 cut(s)	2217
Bme1390I	CCNGG	3 cut(s)	1376, 1713, 2345
Bme18I	GGWCC	3 cut(s)	118, 165, 1607
BmgT120I	GGNCC	6 cut(s)	118, 165, 624, 922, 1607, 1870
BmiI	GGNNCC	8 cut(s)	451, 573, 625, 661, 1128, 1560, 1609, 2043
BmrFI	CCNGG	3 cut(s)	1376, 1713, 2345
BmsI	GCATC	4 cut(s)	487, 724, 2017, 2244
BpiI	GAAGAC	3 cut(s)	1092, 1221, 2192
BpmI	CTGGAG	3 cut(s)	1029, 1335, 1521
Bpu10I	CCTNAGC	1 cut(s)	2311
Bpu1102I	GCTNAGC	1 cut(s)	300
BpuEI	CTTGAG	3 cut(s)	113, 938, 1968
BsaI	GGTCTC	1 cut(s)	147
BsaJI	CCNNGG	3 cut(s)	424, 1574, 1780
BsaWI	WCCGGW	2 cut(s)	138, 2107
BsaXI	ACNNNNNCTCC	2 cut(s)	1956, 1986
Bsc4I	CCNNNNNNNGG	6 cut(s)	195, 322, 699, 811, 1278, 2107
Bse118I	RCCGGY	1 cut(s)	120
Bse1I	ACTGG	4 cut(s)	1352, 1647, 2167, 2258
Bse21I	CCTNAGG	1 cut(s)	337
Bse3DI	GCAATG	1 cut(s)	247
BseBI	CCWGG	3 cut(s)	1376, 1713, 2345
BseDI	CCNNGG	3 cut(s)	424, 1574, 1780
BseGI	GGATG	3 cut(s)	349, 1333, 1855
BseLI	CCNNNNNNNGG	6 cut(s)	195, 322, 699, 811, 1278, 2107
BseMI	GCAATG	1 cut(s)	247
BseMII	CTCAG	4 cut(s)	291, 351, 1188, 2325
BseNI	ACTGG	4 cut(s)	1352, 1647, 2167, 2258
BseRI	GAGGAG	1 cut(s)	959
BseSI	GKGCMC	2 cut(s)	989, 1981
BseXI	GCAGC	2 cut(s)	906, 1021
Bsh1236I	CGCG	2 cut(s)	79, 932
BshFI	GGCC	4 cut(s)	626, 924, 1872, 2143
BshNI	GGYRCC	1 cut(s)	571
BsiHKAI	GWGCWC	1 cut(s)	1981
BsiSI	CCGG	3 cut(s)	121, 139, 2108
BslI	CCNNNNNNNGG	6 cut(s)	195, 322, 699, 811, 1278, 2107
BsmAI	GTCTC	5 cut(s)	89, 147, 1018, 1116, 2263
BsmBI	CGTCTC	2 cut(s)	89, 2263
BsmI	GAATGC	1 cut(s)	285
BsnI	GGCC	4 cut(s)	626, 924, 1872, 2143
Bso31I	GGTCTC	1 cut(s)	147
Bsp1286I	GDGCHC	3 cut(s)	664, 989, 1981
Bsp143I	GATC	7 cut(s)	232, 950, 1003, 1126, 2012, 2306, 2350
Bsp1720I	GCTNAGC	1 cut(s)	300
Bsp19I	CCATGG	1 cut(s)	1574
Bsp68I	TCGCGA	1 cut(s)	932
BspACI	CCGC	5 cut(s)	71, 189, 385, 891, 1506
BspANI	GGCC	4 cut(s)	626, 924, 1872, 2143
BspCNI	CTCAG	4 cut(s)	292, 350, 1187, 2324
BspFNI	CGCG	2 cut(s)	79, 932
BspLI	GGNNCC	8 cut(s)	451, 573, 625, 661, 1128, 1560, 1609, 2043
BspMAI	CTGCAG	2 cut(s)	256, 844
BspMI	ACCTGC	1 cut(s)	694
BspPI	GGATC	5 cut(s)	958, 1011, 1121, 1134, 2301
BspT107I	GGYRCC	1 cut(s)	571
BspTI	CTTAAG	1 cut(s)	1487
BspTNI	GGTCTC	1 cut(s)	147
BsrBI	CCGCTC	1 cut(s)	891
BsrDI	GCAATG	1 cut(s)	247
BsrFI	RCCGGY	1 cut(s)	120
BsrI	ACTGG	4 cut(s)	1352, 1647, 2167, 2258
BssAI	RCCGGY	1 cut(s)	120
BssECI	CCNNGG	3 cut(s)	424, 1574, 1780
BssMI	GATC	7 cut(s)	232, 950, 1003, 1126, 2012, 2306, 2350
BssNAI	GTATAC	1 cut(s)	1190
BssSI	CACGAG	1 cut(s)	2291
BssT1I	CCWWGG	3 cut(s)	424, 1574, 1780
Bst1107I	GTATAC	1 cut(s)	1190
Bst2BI	CACGAG	1 cut(s)	2291
Bst2UI	CCWGG	3 cut(s)	1376, 1713, 2345
Bst4CI	ACNGT	4 cut(s)	109, 1337, 2119, 2191
Bst6I	CTCTTC	3 cut(s)	879, 1353, 1953
BstAFI	CTTAAG	1 cut(s)	1487
BstDEI	CTNAG	7 cut(s)	300, 337, 359, 1062, 1115, 1174, 2311
BstDSI	CCRYGG	1 cut(s)	1574
BstF5I	GGATG	3 cut(s)	349, 1333, 1855
BstFNI	CGCG	2 cut(s)	79, 932
BstH2I	RGCGCY	2 cut(s)	44, 790
BstHHI	GCGC	3 cut(s)	43, 79, 789
BstKTI	GATC	7 cut(s)	235, 953, 1006, 1129, 2015, 2309, 2353
BstMAI	GTCTC	5 cut(s)	89, 147, 1018, 1116, 2263
BstMBI	GATC	7 cut(s)	232, 950, 1003, 1126, 2012, 2306, 2350
BstMWI	GCNNNNNNNGC	5 cut(s)	251, 382, 497, 839, 1040
BstNI	CCWGG	3 cut(s)	1376, 1713, 2345
BstNSI	RCATGY	8 cut(s)	371, 380, 765, 827, 1138, 1164, 1229, 1306
BstSCI	CCNGG	3 cut(s)	1374, 1711, 2343
BstSFI	CTRYAG	3 cut(s)	252, 840, 2145
BstSLI	GKGCMC	2 cut(s)	989, 1981
BstUI	CGCG	2 cut(s)	79, 932
BstV1I	GCAGC	2 cut(s)	906, 1021
BstV2I	GAAGAC	3 cut(s)	1092, 1221, 2192
BstX2I	RGATCY	2 cut(s)	1126, 2306
BstYI	RGATCY	2 cut(s)	1126, 2306
BstZ17I	GTATAC	1 cut(s)	1190
Bsu36I	CCTNAGG	1 cut(s)	337
BsuI	GTATCC	3 cut(s)	8, 813, 1595
BsuRI	GGCC	4 cut(s)	626, 924, 1872, 2143
BtgI	CCRYGG	1 cut(s)	1574
BtsCI	GGATG	3 cut(s)	349, 1333, 1855
BtsI	GCAGTG	4 cut(s)	168, 837, 1110, 1477
BtuMI	TCGCGA	1 cut(s)	932
BveI	ACCTGC	1 cut(s)	694
CaiI	CAGNNNCTG	2 cut(s)	1037, 1181
CfoI	GCGC	3 cut(s)	43, 79, 789
Cfr10I	RCCGGY	1 cut(s)	120
Cfr13I	GGNCC	6 cut(s)	118, 165, 624, 922, 1607, 1870
CpoI	CGGWCCG	1 cut(s)	118
CseI	GACGC	1 cut(s)	106
Csp6I	GTAC	4 cut(s)	333, 531, 1296, 2216
CspCI	CAANNNNNGTGG	2 cut(s)	2149, 2184
CspI	CGGWCCG	1 cut(s)	118
CviQI	GTAC	4 cut(s)	333, 531, 1296, 2216
DdeI	CTNAG	7 cut(s)	300, 337, 359, 1062, 1115, 1174, 2311
DpnI	GATC	7 cut(s)	234, 952, 1005, 1128, 2014, 2308, 2352
DpnII	GATC	7 cut(s)	232, 950, 1003, 1126, 2012, 2306, 2350
Eam1104I	CTCTTC	3 cut(s)	879, 1353, 1953
EarI	CTCTTC	3 cut(s)	879, 1353, 1953
Eco130I	CCWWGG	3 cut(s)	424, 1574, 1780
Eco24I	GRGCYC	1 cut(s)	664
Eco31I	GGTCTC	1 cut(s)	147
Eco47I	GGWCC	3 cut(s)	118, 165, 1607
Eco47III	AGCGCT	1 cut(s)	788
Eco57I	CTGAAG	5 cut(s)	69, 1059, 1152, 1233, 2021
Eco81I	CCTNAGG	1 cut(s)	337
EcoO109I	RGGNCCY	1 cut(s)	1607
EcoRI	GAATTC	1 cut(s)	1775
EcoRII	CCWGG	3 cut(s)	1374, 1711, 2343
EcoT14I	CCWWGG	3 cut(s)	424, 1574, 1780
EcoT38I	GRGCYC	1 cut(s)	664
ErhI	CCWWGG	3 cut(s)	424, 1574, 1780
Esp3I	CGTCTC	2 cut(s)	89, 2263
FalI	AAGNNNNNCTT	8 cut(s)	229, 261, 1251, 1283, 1512, 1544, 1898, 1930
FbaI	TGATCA	1 cut(s)	232
FblI	GTMKAC	2 cut(s)	794, 1189
Fnu4HI	GCNGC	5 cut(s)	189, 892, 895, 1035, 1506
FokI	GGATG	3 cut(s)	356, 1340, 1862
FriOI	GRGCYC	1 cut(s)	664
Fsp4HI	GCNGC	5 cut(s)	189, 892, 895, 1035, 1506
FspBI	CTAG	8 cut(s)	425, 773, 1185, 1193, 1299, 1827, 1836, 2324
GlaI	GCGC	3 cut(s)	42, 78, 788
GluI	GCNGC	5 cut(s)	189, 892, 895, 1035, 1506
GsuI	CTGGAG	3 cut(s)	1029, 1335, 1521
HaeII	RGCGCY	2 cut(s)	44, 790
HaeIII	GGCC	4 cut(s)	626, 924, 1872, 2143
HapII	CCGG	3 cut(s)	121, 139, 2108
HgaI	GACGC	1 cut(s)	106
HhaI	GCGC	3 cut(s)	43, 79, 789
Hin6I	GCGC	3 cut(s)	41, 77, 787
HinP1I	GCGC	3 cut(s)	41, 77, 787
HincII	GTYRAC	1 cut(s)	1333
HindII	GTYRAC	1 cut(s)	1333
HindIII	AAGCTT	3 cut(s)	401, 1859, 2199
HinfI	GANTC	6 cut(s)	539, 1052, 1119, 1172, 1418, 2129
HpaI	GTTAAC	1 cut(s)	1333
HpaII	CCGG	3 cut(s)	121, 139, 2108
HphI	GGTGA	1 cut(s)	242
Hpy166II	GTNNAC	5 cut(s)	390, 795, 1190, 1333, 1979
Hpy188III	TCNNGA	9 cut(s)	453, 463, 773, 931, 1046, 1768, 2005, 2293, 2354
Hpy8I	GTNNAC	5 cut(s)	390, 795, 1190, 1333, 1979
Hpy99I	CGWCG	2 cut(s)	285, 294
HpyCH4III	ACNGT	4 cut(s)	109, 1337, 2119, 2191
HpyCH4IV	ACGT	1 cut(s)	22
HpyF10VI	GCNNNNNNNGC	5 cut(s)	251, 382, 497, 839, 1040
HpyF3I	CTNAG	7 cut(s)	300, 337, 359, 1062, 1115, 1174, 2311
HpySE526I	ACGT	1 cut(s)	22
HspAI	GCGC	3 cut(s)	41, 77, 787
Ksp22I	TGATCA	1 cut(s)	232
KspAI	GTTAAC	1 cut(s)	1333
Kzo9I	GATC	7 cut(s)	232, 950, 1003, 1126, 2012, 2306, 2350
LmnI	GCTCC	5 cut(s)	105, 659, 1048, 1964, 2178
Lsp1109I	GCAGC	2 cut(s)	906, 1021
LweI	GCATC	4 cut(s)	487, 724, 2017, 2244
MaeI	CTAG	8 cut(s)	425, 773, 1185, 1193, 1299, 1827, 1836, 2324
MaeII	ACGT	1 cut(s)	22
MaeIII	GTNAC	9 cut(s)	991, 1263, 1685, 1699, 1810, 1895, 1987, 2056, 2155
MalI	GATC	7 cut(s)	234, 952, 1005, 1128, 2014, 2308, 2352
MbiI	CCGCTC	1 cut(s)	891
MboI	GATC	7 cut(s)	232, 950, 1003, 1126, 2012, 2306, 2350
MfeI	CAATTG	2 cut(s)	521, 678
MflI	RGATCY	2 cut(s)	1126, 2306
MhlI	GDGCHC	3 cut(s)	664, 989, 1981
MlyI	GAGTC	2 cut(s)	1128, 1166
MmeI	TCCRAC	1 cut(s)	272
MroXI	GAANNNNTTC	7 cut(s)	386, 448, 470, 1089, 1243, 1663, 1775
MslI	CAYNNNNRTG	2 cut(s)	1480, 1616
MspA1I	CMGCKG	1 cut(s)	1034
MspCI	CTTAAG	1 cut(s)	1487
MspI	CCGG	3 cut(s)	121, 139, 2108
MspR9I	CCNGG	3 cut(s)	1376, 1713, 2345
MunI	CAATTG	2 cut(s)	521, 678
Mva1269I	GAATGC	1 cut(s)	285
MvaI	CCWGG	3 cut(s)	1376, 1713, 2345
MvnI	CGCG	2 cut(s)	79, 932
MwoI	GCNNNNNNNGC	5 cut(s)	251, 382, 497, 839, 1040
NcoI	CCATGG	1 cut(s)	1574
NdeII	GATC	7 cut(s)	232, 950, 1003, 1126, 2012, 2306, 2350
NlaIV	GGNNCC	8 cut(s)	451, 573, 625, 661, 1128, 1560, 1609, 2043
NmuCI	GTSAC	5 cut(s)	1685, 1810, 1987, 2056, 2155
NruI	TCGCGA	1 cut(s)	932
NspI	RCATGY	8 cut(s)	371, 380, 765, 827, 1138, 1164, 1229, 1306
PaeI	GCATGC	3 cut(s)	380, 1229, 1306
PaqCI	CACCTGC	1 cut(s)	694
PciI	ACATGT	1 cut(s)	367
PcsI	WCGNNNNNNNCGW	2 cut(s)	211, 286
PctI	GAATGC	1 cut(s)	285
PdmI	GAANNNNTTC	7 cut(s)	386, 448, 470, 1089, 1243, 1663, 1775
PfeI	GAWTC	4 cut(s)	539, 1052, 1418, 2129
PflFI	GACNNNGTC	1 cut(s)	2117
PfoI	TCCNGGA	1 cut(s)	2343
PkrI	GCNGC	5 cut(s)	190, 893, 896, 1036, 1507
PleI	GAGTC	2 cut(s)	1127, 1166
PpsI	GAGTC	2 cut(s)	1127, 1166
PpuMI	RGGWCCY	1 cut(s)	1607
PscI	ACATGT	1 cut(s)	367
PshBI	ATTAAT	1 cut(s)	903
Psp1406I	AACGTT	1 cut(s)	22
Psp5II	RGGWCCY	1 cut(s)	1607
Psp6I	CCWGG	3 cut(s)	1374, 1711, 2343
PspGI	CCWGG	3 cut(s)	1374, 1711, 2343
PspN4I	GGNNCC	8 cut(s)	451, 573, 625, 661, 1128, 1560, 1609, 2043
PspPI	GGNCC	6 cut(s)	118, 165, 624, 922, 1607, 1870
PspPPI	RGGWCCY	1 cut(s)	1607
PsrI	GAACNNNNNNTAC	2 cut(s)	2088, 2120
PstI	CTGCAG	2 cut(s)	256, 844
PstNI	CAGNNNCTG	2 cut(s)	1037, 1181
PsuI	RGATCY	2 cut(s)	1126, 2306
PsyI	GACNNNGTC	1 cut(s)	2117
PvuII	CAGCTG	1 cut(s)	1034
RruI	TCGCGA	1 cut(s)	932
RsaI	GTAC	4 cut(s)	334, 532, 1297, 2217
RsaNI	GTAC	4 cut(s)	333, 531, 1296, 2216
RseI	CAYNNNNRTG	2 cut(s)	1480, 1616
Rsr2I	CGGWCCG	1 cut(s)	118
RsrII	CGGWCCG	1 cut(s)	118
SatI	GCNGC	5 cut(s)	189, 892, 895, 1035, 1506
Sau3AI	GATC	7 cut(s)	232, 950, 1003, 1126, 2012, 2306, 2350
Sau96I	GGNCC	6 cut(s)	118, 165, 624, 922, 1607, 1870
ScaI	AGTACT	1 cut(s)	2217
SchI	GAGTC	2 cut(s)	1128, 1166
ScrFI	CCNGG	3 cut(s)	1376, 1713, 2345
SduI	GDGCHC	3 cut(s)	664, 989, 1981
SfaNI	GCATC	4 cut(s)	487, 724, 2017, 2244
SfcI	CTRYAG	3 cut(s)	252, 840, 2145
SinI	GGWCC	3 cut(s)	118, 165, 1607
SmiMI	CAYNNNNRTG	2 cut(s)	1480, 1616
SmlI	CTYRAG	4 cut(s)	92, 917, 1487, 1983
SmoI	CTYRAG	4 cut(s)	92, 917, 1487, 1983
SphI	GCATGC	3 cut(s)	380, 1229, 1306
SsiI	CCGC	5 cut(s)	71, 189, 385, 891, 1506
SspMI	CTAG	8 cut(s)	425, 773, 1185, 1193, 1299, 1827, 1836, 2324
StyD4I	CCNGG	3 cut(s)	1374, 1711, 2343
StyI	CCWWGG	3 cut(s)	424, 1574, 1780
TaaI	ACNGT	4 cut(s)	109, 1337, 2119, 2191
TaiI	ACGT	1 cut(s)	25
TaqI	TCGA	5 cut(s)	46, 205, 1274, 1290, 2173
TaqII	GACCGA	1 cut(s)	1829
TatI	WGTACW	1 cut(s)	2215
TauI	GCSGC	3 cut(s)	191, 894, 1508
TfiI	GAWTC	4 cut(s)	539, 1052, 1418, 2129
TseFI	GTSAC	5 cut(s)	1685, 1810, 1987, 2056, 2155
TseI	GCWGC	2 cut(s)	894, 1034
Tsp45I	GTSAC	5 cut(s)	1685, 1810, 1987, 2056, 2155
TspDTI	ATGAA	8 cut(s)	24, 308, 638, 1129, 1431, 1656, 1788, 1866
TspGWI	ACGGA	4 cut(s)	237, 1756, 2281, 2287
Tth111I	GACNNNGTC	1 cut(s)	2117
Vha464I	CTTAAG	1 cut(s)	1487
VneI	GTGCAC	1 cut(s)	1977
VpaK11BI	GGWCC	3 cut(s)	118, 165, 1607
VspI	ATTAAT	1 cut(s)	903
XapI	RAATTY	7 cut(s)	1318, 1400, 1762, 1775, 1889, 2299, 2369
XbaI	TCTAGA	1 cut(s)	772
XceI	RCATGY	8 cut(s)	371, 380, 765, 827, 1138, 1164, 1229, 1306
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2341
XmaJI	CCTAGG	1 cut(s)	424
XmiI	GTMKAC	2 cut(s)	794, 1189
XmnI	GAANNNNTTC	7 cut(s)	386, 448, 470, 1089, 1243, 1663, 1775
XspI	CTAG	8 cut(s)	425, 773, 1185, 1193, 1299, 1827, 1836, 2324
ZrmI	AGTACT	1 cut(s)	2217

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.