Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002117

Physical Location & Seq

Genomic Coordinates Forward (+)

18676892 .. 18679683

Gene Structure 2792 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G015220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1536 bp

ATGGTGTTATTTCTTTCTGTTTCCCTGTTTTGTCATTTTTATGACTATTGGAGGATTAGATTAAGTTTGTGGGTTATGTTAAATTGGTCTGTGATGGTCTGTTTAACTAAATGCAGATCGATGGAAGAGAGCGGCAGCATGATTAATTTTTTCTCACTTGAGGGCCAACTCGCGAAATTAGAAGTTATGGGATCAAAAGCATTTCAACTCCTCCAAAGGACATTGTGCCCTGTTACAAGAAGAAAGGATCATACTTGGGCATTGGAGAGACATTCAGCTGCTGAAGCTCCAGATGATTCCCAATCTAAGACTATACTTGAAAATGAGGAAGACATTCCTTCTCATGCAGTGTTGTCTCTTAGAGTCAAGGATCCTCGCATGTTCATAGAGAAACGAAAGACTGCATGTGCTTCAGACTTAGGTTCTGCTAGTATACTAGCTGATGAACAAGGAACTGAAGACAAAGAGCATGCTGTCAGTGGAATTATTTCAGACAAGAAGAAAGAGTTACTTTCCTCGATGGGTTCAGAACTCGAAGGTACTAGCATGCTCGCAGAAAAGAATTTGTGGGATGTTAACAGTGGTATAAGTCCTCCAGTGGAAGAGATGGTTCTTTGCCAGGAAAGATATGACCAGAATAAAAAATTCTTCTGCCTTGATGAATCAAGTTCAAGGGTACTAAATACTTCAACCAATTTGCAGTGCAGTTCTTGTCCTGTTCTGCTTTTGAAAAATGACAACGGAAGGGGCTTGCATATTGGATGGTTTATAATTCTACCCTTGAGCTGGGTCAGGGCATTTTGGATTCCTCTCGTCTCCAAGGGGGCTCATGTGATAGGTTTAAGAGAGAGGCACTGGATTTCATGTGACGCTTCTAGAATGTTGCAAGTAAATCTTTCTTCTTTTGCAGGTAGGAGTGCCATGTTTTCCTTCGAATTTCCCTGTTGCAGTGCATATTTATGCCTTAAGGAAACTGAAAGTGCCGCCTCCAATGTTAAAGAGCAACTTCGTCCTCCAGCACAAAGACCTTTGAGGGTTCCCATTTTACCCCCATGGAATAGTATCCAAGTTTCTTTAAGGGAAGGACCCACCAAAATGCGAAATGCTGAAACTTTTAGACTGGAAAACGGGGTCAGAAGCAATTCATCATCTAACTCGGAGTGTGACAATTATGATGTTACATTCTGTCCTGGTAATTTGTTTGATGGTTTTGTAGCACGGACATCTTTTTCACTGACAAATTTCTTGAATGAATTCCAAGGTTGTAATTTACGCCTATGTCCTCATGTGACCGATAAGACAACTAGCTTTACTTGGTTTATGAGGGATGAAAGCAAGCTTGGGCAGGGCCAAAATGGGATTACCAAATTTAGTTACAAGCACAAGTTATGCTTTGGTTTTTTTGAAGAGGGAGCAGTTTTTTGTGCACCTCAAGTGACTGACATCTCACTCTGGACAAGGTATAAGGTTCTAATCTTTGTATTCTTACTTGGTGGTACTTGGTACTCTGTTCTAGGCTTTTCCTTCCTAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000171 GO:0000172 GO:0000966 GO:0001682 GO:0003674 GO:0003824 GO:0004518 GO:0004519 GO:0004521 GO:0004526 GO:0004540 GO:0004549 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005655 GO:0005730 GO:0005732 GO:0006139 GO:0006396 GO:0006399 GO:0006401 GO:0006725 GO:0006807 GO:0008033 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010467 GO:0016070 GO:0016078 GO:0016787 GO:0016788 GO:0016891 GO:0016893 GO:0019439 GO:0030677 GO:0030681 GO:0031974 GO:0031981 GO:0032991 GO:0034470 GO:0034471 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0046700 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0090502 GO:0099116 GO:0140098 GO:0140101 GO:1901360 GO:1901361 GO:1901575 GO:1902494 GO:1902555 GO:1905348 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 ko03013 map03008 map03013

Pfam Domains

Protein Families

POP1 POPLD

Protein Analysis

511

Amino Acids

57.89

Weight (kDa)

7.09

Isoelectric Point (pI)

44.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POPLD	PF08170	254 - 343	2.8e-08	POPLD (NUC188) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47300 AT2G47300 AT2G47300
fragaria_vesca	FvH4_1g27070
malus_domestica	MD17G1273000.v1.1 MD17G1275500.v1.1 MD17G1275600.v1.1 MD17G1275700.v1.1 MD17G1277400.v1.1
prunus_persica	Prupe.3G010600_v2.0.a1 Prupe.3G010600_v2.0.a1 Prupe.3G010600_v2.0.a1
pyrus_communis	pycom09g19200 pycom17g27430 pycom17g27440 pycom17g27500
rosa_chinensis	RchiOBHm_Chr3g0487391 RchiOBHm_Chr3g0487761
rosa_laevigata	RLG00000023008
rosa_multiflora	Rmu_co8087646.1_g000001 Rmu_sc0001955.1_g000003 Rmu_sc0003620.1_g000002 Rmu_sc0008132.1_g000008 Rmu_sc0009101.1_g000013 Rmu_sc0021127.1_g000002
rosa_roxburghii	Rroxscaffold_5G00333670 Rroxscaffold_6G00394510 Rroxscaffold_6G00394520 Rroxscaffold_6G00394820 Rroxscaffold_6G00394830
rosa_rugosa	Rorug03G0233600
rosa_samantha	Rh3AG281700 Rh3BG317300 Rh3BG321000 Rh3CG315400 Rh3DG313300 Rh3DG318100 Rh5DG285200
rosa_wichuraiana	Rw1G008590 Rw2G029580 Rw3G024940 Rw5G013600 Rw5G015220 Rw7G032520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	770
Acc36I	ACCTGC	1 cut(s)	899
AccBSI	CCGCTC	1 cut(s)	132
AccI	GTMKAC	1 cut(s)	433
AccII	CGCG	1 cut(s)	173
AciI	CCGC	2 cut(s)	132, 984
AclWI	GGATC	4 cut(s)	199, 255, 365, 378
AcsI	RAATTY	6 cut(s)	562, 644, 935, 1240, 1253, 1367
AcuI	CTGAAG	3 cut(s)	303, 396, 477
AfaI	GTAC	4 cut(s)	541, 678, 1498, 1505
AfiI	CCNNNNNNNGG	1 cut(s)	786
AflII	CTTAAG	1 cut(s)	965
AgsI	TTSAA	7 cut(s)	206, 320, 672, 690, 730, 1249, 1406
AjnI	CCWGG	2 cut(s)	618, 1189
AjuI	GAANNNNNNNTTGG	2 cut(s)	1323, 1355
AluBI	AGCT	6 cut(s)	278, 287, 440, 786, 1308, 1339
AluI	AGCT	6 cut(s)	278, 287, 440, 786, 1308, 1339
Alw21I	GWGCWC	1 cut(s)	1429
Alw26I	GTCTC	3 cut(s)	262, 360, 820
Alw44I	GTGCAC	1 cut(s)	1425
AlwI	GGATC	4 cut(s)	199, 255, 365, 378
AlwNI	CAGNNNCTG	1 cut(s)	281
AoxI	GGCC	2 cut(s)	163, 1348
ApaLI	GTGCAC	1 cut(s)	1425
ApeKI	GCWGC	2 cut(s)	135, 278
ApoI	RAATTY	6 cut(s)	562, 644, 935, 1240, 1253, 1367
AseI	ATTAAT	1 cut(s)	144
Asp700I	GAANNNNTTC	4 cut(s)	333, 487, 1141, 1253
AspS9I	GGNCC	3 cut(s)	163, 1085, 1348
AsuII	TTCGAA	1 cut(s)	933
AvaII	GGWCC	1 cut(s)	1085
BaeGI	GKGCMC	2 cut(s)	230, 1429
BamHI	GGATCC	1 cut(s)	370
BanII	GRGCYC	1 cut(s)	829
BbsI	GAAGAC	2 cut(s)	336, 465
Bbv12I	GWGCWC	1 cut(s)	1429
BbvI	GCAGC	2 cut(s)	147, 265
BccI	CCATC	6 cut(s)	88, 115, 514, 601, 756, 1199
BciT130I	CCWGG	2 cut(s)	620, 1191
BciVI	GTATCC	1 cut(s)	1073
BcoDI	GTCTC	3 cut(s)	262, 360, 820
BfaI	CTAG	6 cut(s)	429, 437, 543, 876, 1305, 1514
BfrI	CTTAAG	1 cut(s)	965
BfuAI	ACCTGC	1 cut(s)	899
BfuI	GTATCC	1 cut(s)	1073
BisI	GCNGC	4 cut(s)	133, 136, 279, 984
BlsI	GCNGC	4 cut(s)	134, 137, 280, 985
Bme1390I	CCNGG	2 cut(s)	620, 1191
Bme18I	GGWCC	1 cut(s)	1085
BmgT120I	GGNCC	3 cut(s)	163, 1085, 1348
BmiI	GGNNCC	3 cut(s)	372, 1038, 1087
BmrFI	CCNGG	2 cut(s)	620, 1191
BpiI	GAAGAC	2 cut(s)	336, 465
BpmI	CTGGAG	3 cut(s)	273, 579, 999
Bpu14I	TTCGAA	1 cut(s)	933
BpuEI	CTTGAG	3 cut(s)	179, 802, 1416
Bsa29I	ATCGAT	1 cut(s)	119
BsaJI	CCNNGG	3 cut(s)	819, 1052, 1258
Bsc4I	CCNNNNNNNGG	1 cut(s)	786
Bse1I	ACTGG	3 cut(s)	596, 860, 1125
BseBI	CCWGG	2 cut(s)	620, 1191
BseCI	ATCGAT	1 cut(s)	119
BseDI	CCNNGG	3 cut(s)	819, 1052, 1258
BseGI	GGATG	3 cut(s)	577, 767, 1333
BseLI	CCNNNNNNNGG	1 cut(s)	786
BseNI	ACTGG	3 cut(s)	596, 860, 1125
BseRI	GAGGAG	1 cut(s)	200
BseSI	GKGCMC	2 cut(s)	230, 1429
BseXI	GCAGC	2 cut(s)	147, 265
BseYI	CCCAGC	1 cut(s)	786
BsgI	GTGCAG	1 cut(s)	724
Bsh1236I	CGCG	1 cut(s)	173
BshFI	GGCC	2 cut(s)	165, 1350
BshVI	ATCGAT	1 cut(s)	119
BsiHKAI	GWGCWC	1 cut(s)	1429
BslI	CCNNNNNNNGG	1 cut(s)	786
BsmAI	GTCTC	3 cut(s)	262, 360, 820
BsmBI	CGTCTC	1 cut(s)	820
BsnI	GGCC	2 cut(s)	165, 1350
Bsp119I	TTCGAA	1 cut(s)	933
Bsp1286I	GDGCHC	3 cut(s)	230, 829, 1429
Bsp143I	GATC	4 cut(s)	116, 191, 247, 370
Bsp19I	CCATGG	1 cut(s)	1052
Bsp68I	TCGCGA	1 cut(s)	173
BspACI	CCGC	2 cut(s)	132, 984
BspANI	GGCC	2 cut(s)	165, 1350
BspDI	ATCGAT	1 cut(s)	119
BspFNI	CGCG	1 cut(s)	173
BspLI	GGNNCC	3 cut(s)	372, 1038, 1087
BspMI	ACCTGC	1 cut(s)	899
BspPI	GGATC	4 cut(s)	199, 255, 365, 378
BspT104I	TTCGAA	1 cut(s)	933
BspTI	CTTAAG	1 cut(s)	965
BsrBI	CCGCTC	1 cut(s)	132
BsrI	ACTGG	3 cut(s)	596, 860, 1125
BssECI	CCNNGG	3 cut(s)	819, 1052, 1258
BssMI	GATC	4 cut(s)	116, 191, 247, 370
BssNAI	GTATAC	1 cut(s)	434
BssT1I	CCWWGG	3 cut(s)	819, 1052, 1258
Bst1107I	GTATAC	1 cut(s)	434
Bst2UI	CCWGG	2 cut(s)	620, 1191
Bst4CI	ACNGT	1 cut(s)	581
Bst6I	CTCTTC	3 cut(s)	120, 597, 1401
BstAFI	CTTAAG	1 cut(s)	965
BstBI	TTCGAA	1 cut(s)	933
BstC8I	GCNNGC	5 cut(s)	471, 548, 552, 752, 1337
BstDEI	CTNAG	3 cut(s)	306, 359, 418
BstDSI	CCRYGG	1 cut(s)	1052
BstF5I	GGATG	3 cut(s)	577, 767, 1333
BstFNI	CGCG	1 cut(s)	173
BstKTI	GATC	4 cut(s)	119, 194, 250, 373
BstMAI	GTCTC	3 cut(s)	262, 360, 820
BstMBI	GATC	4 cut(s)	116, 191, 247, 370
BstMWI	GCNNNNNNNGC	1 cut(s)	284
BstNI	CCWGG	2 cut(s)	620, 1191
BstNSI	RCATGY	4 cut(s)	382, 408, 473, 550
BstSCI	CCNGG	2 cut(s)	618, 1189
BstSLI	GKGCMC	2 cut(s)	230, 1429
BstUI	CGCG	1 cut(s)	173
BstV1I	GCAGC	2 cut(s)	147, 265
BstV2I	GAAGAC	2 cut(s)	336, 465
BstX2I	RGATCY	1 cut(s)	370
BstYI	RGATCY	1 cut(s)	370
BstZ17I	GTATAC	1 cut(s)	434
Bsu15I	ATCGAT	1 cut(s)	119
BsuI	GTATCC	1 cut(s)	1073
BsuRI	GGCC	2 cut(s)	165, 1350
BsuTUI	ATCGAT	1 cut(s)	119
BtgI	CCRYGG	1 cut(s)	1052
BtsCI	GGATG	3 cut(s)	577, 767, 1333
BtsI	GCAGTG	3 cut(s)	354, 707, 955
BtsIMutI	CAGTG	8 cut(s)	354, 484, 586, 603, 707, 853, 955, 1232
BtuMI	TCGCGA	1 cut(s)	173
BveI	ACCTGC	1 cut(s)	899
Cac8I	GCNNGC	5 cut(s)	471, 548, 552, 752, 1337
CaiI	CAGNNNCTG	1 cut(s)	281
Cfr13I	GGNCC	3 cut(s)	163, 1085, 1348
ClaI	ATCGAT	1 cut(s)	119
CseI	GACGC	1 cut(s)	878
Csp6I	GTAC	4 cut(s)	540, 677, 1497, 1504
CviQI	GTAC	4 cut(s)	540, 677, 1497, 1504
DdeI	CTNAG	3 cut(s)	306, 359, 418
DpnI	GATC	4 cut(s)	118, 193, 249, 372
DpnII	GATC	4 cut(s)	116, 191, 247, 370
Eam1104I	CTCTTC	3 cut(s)	120, 597, 1401
EarI	CTCTTC	3 cut(s)	120, 597, 1401
Eco130I	CCWWGG	3 cut(s)	819, 1052, 1258
Eco24I	GRGCYC	1 cut(s)	829
Eco47I	GGWCC	1 cut(s)	1085
Eco57I	CTGAAG	3 cut(s)	303, 396, 477
EcoO109I	RGGNCCY	1 cut(s)	1085
EcoRI	GAATTC	1 cut(s)	1253
EcoRII	CCWGG	2 cut(s)	618, 1189
EcoT14I	CCWWGG	3 cut(s)	819, 1052, 1258
EcoT38I	GRGCYC	1 cut(s)	829
ErhI	CCWWGG	3 cut(s)	819, 1052, 1258
Esp3I	CGTCTC	1 cut(s)	820
FalI	AAGNNNNNCTT	8 cut(s)	495, 527, 879, 911, 990, 1022, 1376, 1408
FblI	GTMKAC	1 cut(s)	433
Fnu4HI	GCNGC	4 cut(s)	133, 136, 279, 984
FokI	GGATG	3 cut(s)	584, 774, 1340
FriOI	GRGCYC	1 cut(s)	829
Fsp4HI	GCNGC	4 cut(s)	133, 136, 279, 984
FspBI	CTAG	6 cut(s)	429, 437, 543, 876, 1305, 1514
GluI	GCNGC	4 cut(s)	133, 136, 279, 984
GsaI	CCCAGC	1 cut(s)	790
GsuI	CTGGAG	3 cut(s)	273, 579, 999
HaeIII	GGCC	2 cut(s)	165, 1350
HgaI	GACGC	1 cut(s)	878
HincII	GTYRAC	1 cut(s)	577
HindII	GTYRAC	1 cut(s)	577
HindIII	AAGCTT	1 cut(s)	1337
HinfI	GANTC	4 cut(s)	296, 363, 662, 805
HpaI	GTTAAC	1 cut(s)	577
Hpy166II	GTNNAC	3 cut(s)	434, 577, 1427
Hpy188I	TCNGA	5 cut(s)	415, 493, 529, 1136, 1159
Hpy188III	TCNNGA	5 cut(s)	172, 290, 876, 1246, 1453
Hpy8I	GTNNAC	3 cut(s)	434, 577, 1427
HpyAV	CCTTC	6 cut(s)	348, 530, 738, 940, 1076, 1534
HpyCH4III	ACNGT	1 cut(s)	581
HpyF10VI	GCNNNNNNNGC	1 cut(s)	284
HpyF3I	CTNAG	3 cut(s)	306, 359, 418
KspAI	GTTAAC	1 cut(s)	577
Kzo9I	GATC	4 cut(s)	116, 191, 247, 370
LmnI	GCTCC	2 cut(s)	292, 1412
Lsp1109I	GCAGC	2 cut(s)	147, 265
MaeI	CTAG	6 cut(s)	429, 437, 543, 876, 1305, 1514
MaeIII	GTNAC	8 cut(s)	232, 507, 866, 1163, 1177, 1288, 1373, 1435
MalI	GATC	4 cut(s)	118, 193, 249, 372
MbiI	CCGCTC	1 cut(s)	132
MboI	GATC	4 cut(s)	116, 191, 247, 370
MboII	GAAGA	9 cut(s)	137, 252, 341, 470, 511, 614, 640, 891, 1418
MflI	RGATCY	1 cut(s)	370
MhlI	GDGCHC	3 cut(s)	230, 829, 1429
MlyI	GAGTC	1 cut(s)	372
MroXI	GAANNNNTTC	4 cut(s)	333, 487, 1141, 1253
MseI	TTAA	9 cut(s)	62, 80, 104, 144, 576, 842, 966, 996, 1076
MslI	CAYNNNNRTG	3 cut(s)	39, 958, 1094
MspA1I	CMGCKG	1 cut(s)	278
MspCI	CTTAAG	1 cut(s)	965
MspR9I	CCNGG	2 cut(s)	620, 1191
MvaI	CCWGG	2 cut(s)	620, 1191
MvnI	CGCG	1 cut(s)	173
MwoI	GCNNNNNNNGC	1 cut(s)	284
NcoI	CCATGG	1 cut(s)	1052
NdeII	GATC	4 cut(s)	116, 191, 247, 370
NlaIV	GGNNCC	3 cut(s)	372, 1038, 1087
NmuCI	GTSAC	4 cut(s)	866, 1163, 1288, 1435
NruI	TCGCGA	1 cut(s)	173
NspI	RCATGY	4 cut(s)	382, 408, 473, 550
NspV	TTCGAA	1 cut(s)	933
PaeI	GCATGC	2 cut(s)	473, 550
PdmI	GAANNNNTTC	4 cut(s)	333, 487, 1141, 1253
PfeI	GAWTC	3 cut(s)	296, 662, 805
PkrI	GCNGC	4 cut(s)	134, 137, 280, 985
PleI	GAGTC	1 cut(s)	371
PpsI	GAGTC	1 cut(s)	371
PpuMI	RGGWCCY	1 cut(s)	1085
PshBI	ATTAAT	1 cut(s)	144
PsiI	TTATAA	1 cut(s)	770
Psp5II	RGGWCCY	1 cut(s)	1085
Psp6I	CCWGG	2 cut(s)	618, 1189
PspFI	CCCAGC	1 cut(s)	786
PspGI	CCWGG	2 cut(s)	618, 1189
PspN4I	GGNNCC	3 cut(s)	372, 1038, 1087
PspPI	GGNCC	3 cut(s)	163, 1085, 1348
PspPPI	RGGWCCY	1 cut(s)	1085
PstNI	CAGNNNCTG	1 cut(s)	281
PsuI	RGATCY	1 cut(s)	370
PvuII	CAGCTG	1 cut(s)	278
RruI	TCGCGA	1 cut(s)	173
RsaI	GTAC	4 cut(s)	541, 678, 1498, 1505
RsaNI	GTAC	4 cut(s)	540, 677, 1497, 1504
RseI	CAYNNNNRTG	3 cut(s)	39, 958, 1094
SaqAI	TTAA	9 cut(s)	62, 80, 104, 144, 576, 842, 966, 996, 1076
SatI	GCNGC	4 cut(s)	133, 136, 279, 984
Sau3AI	GATC	4 cut(s)	116, 191, 247, 370
Sau96I	GGNCC	3 cut(s)	163, 1085, 1348
SchI	GAGTC	1 cut(s)	372
ScrFI	CCNGG	2 cut(s)	620, 1191
SduI	GDGCHC	3 cut(s)	230, 829, 1429
SfuI	TTCGAA	1 cut(s)	933
SinI	GGWCC	1 cut(s)	1085
SmiMI	CAYNNNNRTG	3 cut(s)	39, 958, 1094
SmlI	CTYRAG	4 cut(s)	158, 781, 965, 1431
SmoI	CTYRAG	4 cut(s)	158, 781, 965, 1431
SphI	GCATGC	2 cut(s)	473, 550
SsiI	CCGC	2 cut(s)	132, 984
SspMI	CTAG	6 cut(s)	429, 437, 543, 876, 1305, 1514
StyD4I	CCNGG	2 cut(s)	618, 1189
StyI	CCWWGG	3 cut(s)	819, 1052, 1258
TaaI	ACNGT	1 cut(s)	581
TaqI	TCGA	4 cut(s)	119, 518, 534, 933
TaqII	GACCGA	1 cut(s)	1307
TauI	GCSGC	2 cut(s)	135, 986
TfiI	GAWTC	3 cut(s)	296, 662, 805
Tru1I	TTAA	9 cut(s)	62, 80, 104, 144, 576, 842, 966, 996, 1076
Tru9I	TTAA	9 cut(s)	62, 80, 104, 144, 576, 842, 966, 996, 1076
TscAI	CASTG	8 cut(s)	354, 484, 586, 603, 707, 860, 955, 1239
TseFI	GTSAC	4 cut(s)	866, 1163, 1288, 1435
TseI	GCWGC	2 cut(s)	135, 278
Tsp45I	GTSAC	4 cut(s)	866, 1163, 1288, 1435
TspDTI	ATGAA	7 cut(s)	373, 459, 675, 852, 1134, 1266, 1344
TspGWI	ACGGA	2 cut(s)	756, 1234
TspRI	CASTG	8 cut(s)	354, 484, 586, 603, 707, 860, 955, 1239
Vha464I	CTTAAG	1 cut(s)	965
VneI	GTGCAC	1 cut(s)	1425
VpaK11BI	GGWCC	1 cut(s)	1085
VspI	ATTAAT	1 cut(s)	144
XapI	RAATTY	6 cut(s)	562, 644, 935, 1240, 1253, 1367
XbaI	TCTAGA	1 cut(s)	875
XceI	RCATGY	4 cut(s)	382, 408, 473, 550
XmiI	GTMKAC	1 cut(s)	433
XmnI	GAANNNNTTC	4 cut(s)	333, 487, 1141, 1253
XspI	CTAG	6 cut(s)	429, 437, 543, 876, 1305, 1514

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.