Ribonucleases P/MRP protein subunit POP1
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G47300 AT2G47300 AT2G47300 |
| fragaria_vesca | FvH4_1g27070 |
| malus_domestica | MD17G1273000.v1.1 MD17G1275500.v1.1 MD17G1275600.v1.1 MD17G1275700.v1.1 MD17G1277400.v1.1 |
| prunus_persica | Prupe.3G010600_v2.0.a1 Prupe.3G010600_v2.0.a1 Prupe.3G010600_v2.0.a1 |
| pyrus_communis | pycom09g19200 pycom17g27430 pycom17g27440 pycom17g27500 |
| rosa_chinensis | RchiOBHm_Chr3g0487391 RchiOBHm_Chr3g0487761 |
| rosa_laevigata | RLG00000023008 |
| rosa_multiflora | Rmu_co8087646.1_g000001 Rmu_sc0001955.1_g000003 Rmu_sc0003620.1_g000002 Rmu_sc0008132.1_g000008 Rmu_sc0009101.1_g000013 Rmu_sc0021127.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00333670 Rroxscaffold_6G00394510 Rroxscaffold_6G00394520 Rroxscaffold_6G00394820 Rroxscaffold_6G00394830 |
| rosa_rugosa | Rorug03G0233600 |
| rosa_samantha | Rh3AG281700 Rh3BG317300 Rh3BG321000 Rh3CG315400 Rh3DG313300 Rh3DG318100 Rh5DG285200 |
| rosa_wichuraiana | Rw1G008590 Rw2G029580 Rw3G024940 Rw5G013600 Rw5G015220 Rw7G032520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 188 |
| Acc36I | ACCTGC | 2 cut(s) | 1253, 1267 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 70 |
| AccI | GTMKAC | 2 cut(s) | 1064, 1192 |
| AciI | CCGC | 4 cut(s) | 44, 174, 388, 706 |
| AclWI | GGATC | 4 cut(s) | 958, 979, 1124, 1137 |
| AcoI | YGGCCR | 1 cut(s) | 715 |
| AcsI | RAATTY | 3 cut(s) | 761, 1092, 1360 |
| AcuI | CTGAAG | 2 cut(s) | 861, 1236 |
| AfaI | GTAC | 3 cut(s) | 352, 781, 1206 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 70, 325, 427, 529, 1315 |
| AflIII | ACRYGT | 1 cut(s) | 370 |
| AjnI | CCWGG | 2 cut(s) | 995, 1195 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 358, 390 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 477, 509 |
| Alw21I | GWGCWC | 1 cut(s) | 667 |
| Alw26I | GTCTC | 4 cut(s) | 92, 150, 582, 1021 |
| AlwI | GGATC | 4 cut(s) | 958, 979, 1124, 1137 |
| AoxI | GGCC | 3 cut(s) | 533, 707, 715 |
| ApeKI | GCWGC | 3 cut(s) | 740, 805, 1037 |
| ApoI | RAATTY | 3 cut(s) | 761, 1092, 1360 |
| AseI | ATTAAT | 1 cut(s) | 903 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 389, 473, 1364 |
| AspS9I | GGNCC | 2 cut(s) | 453, 533 |
| AsuHPI | GGTGA | 2 cut(s) | 184, 1211 |
| AvaII | GGWCC | 1 cut(s) | 453 |
| BalI | TGGCCA | 1 cut(s) | 717 |
| BamHI | GGATCC | 1 cut(s) | 1129 |
| BanII | GRGCYC | 1 cut(s) | 1424 |
| BbsI | GAAGAC | 1 cut(s) | 1224 |
| Bbv12I | GWGCWC | 1 cut(s) | 667 |
| BbvI | GCAGC | 3 cut(s) | 752, 817, 1024 |
| BccI | CCATC | 4 cut(s) | 5, 341, 476, 874 |
| BceAI | ACGGC | 1 cut(s) | 38 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 877, 911 |
| BciT130I | CCWGG | 2 cut(s) | 997, 1197 |
| BciVI | GTATCC | 1 cut(s) | 813 |
| BclI | TGATCA | 1 cut(s) | 226 |
| BcoDI | GTCTC | 4 cut(s) | 92, 150, 582, 1021 |
| BfaI | CTAG | 4 cut(s) | 773, 1002, 1188, 1208 |
| BfmI | CTRYAG | 2 cut(s) | 1161, 1260 |
| BfuAI | ACCTGC | 2 cut(s) | 1253, 1267 |
| BfuI | GTATCC | 1 cut(s) | 813 |
| BisI | GCNGC | 4 cut(s) | 707, 741, 806, 1038 |
| BlpI | GCTNAGC | 1 cut(s) | 303 |
| BlsI | GCNGC | 4 cut(s) | 708, 742, 807, 1039 |
| Bme1390I | CCNGG | 2 cut(s) | 997, 1197 |
| Bme18I | GGWCC | 1 cut(s) | 453 |
| BmgT120I | GGNCC | 2 cut(s) | 453, 533 |
| BmiI | GGNNCC | 3 cut(s) | 454, 534, 1131 |
| BmrFI | CCNGG | 2 cut(s) | 997, 1197 |
| BmrI | ACTGGG | 1 cut(s) | 1054 |
| BmsI | GCATC | 2 cut(s) | 490, 1156 |
| BmuI | ACTGGG | 1 cut(s) | 1054 |
| BpiI | GAAGAC | 1 cut(s) | 1224 |
| BpmI | CTGGAG | 2 cut(s) | 237, 1296 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 303 |
| BpuEI | CTTGAG | 3 cut(s) | 116, 938, 1155 |
| BsaI | GGTCTC | 1 cut(s) | 150 |
| BsaJI | CCNNGG | 2 cut(s) | 426, 1041 |
| BsaWI | WCCGGW | 1 cut(s) | 141 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 235, 265, 477, 507, 530, 560 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 70, 325, 427, 529, 1315 |
| Bse1I | ACTGG | 2 cut(s) | 1060, 1313 |
| Bse3DI | GCAATG | 1 cut(s) | 245 |
| BseBI | CCWGG | 2 cut(s) | 997, 1197 |
| BseDI | CCNNGG | 2 cut(s) | 426, 1041 |
| BseGI | GGATG | 3 cut(s) | 352, 487, 1054 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 70, 325, 427, 529, 1315 |
| BseMI | GCAATG | 1 cut(s) | 245 |
| BseMII | CTCAG | 1 cut(s) | 294 |
| BseNI | ACTGG | 2 cut(s) | 1060, 1313 |
| BseRI | GAGGAG | 2 cut(s) | 570, 1100 |
| BseXI | GCAGC | 3 cut(s) | 752, 817, 1024 |
| BsgI | GTGCAG | 1 cut(s) | 319 |
| BshFI | GGCC | 3 cut(s) | 535, 709, 717 |
| BsiHKAI | GWGCWC | 1 cut(s) | 667 |
| BsiSI | CCGG | 2 cut(s) | 142, 536 |
| BslFI | GGGAC | 2 cut(s) | 905, 1099 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 70, 325, 427, 529, 1315 |
| BsmAI | GTCTC | 4 cut(s) | 92, 150, 582, 1021 |
| BsmFI | GGGAC | 2 cut(s) | 905, 1099 |
| BsmI | GAATGC | 1 cut(s) | 288 |
| BsnI | GGCC | 3 cut(s) | 535, 709, 717 |
| Bso31I | GGTCTC | 1 cut(s) | 150 |
| Bsp1286I | GDGCHC | 2 cut(s) | 667, 1424 |
| Bsp143I | GATC | 7 cut(s) | 226, 799, 950, 984, 1129, 1275, 1427 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 303 |
| BspACI | CCGC | 4 cut(s) | 44, 174, 388, 706 |
| BspANI | GGCC | 3 cut(s) | 535, 709, 717 |
| BspCNI | CTCAG | 1 cut(s) | 295 |
| BspHI | TCATGA | 1 cut(s) | 496 |
| BspLI | GGNNCC | 3 cut(s) | 454, 534, 1131 |
| BspMAI | CTGCAG | 2 cut(s) | 1165, 1264 |
| BspMI | ACCTGC | 2 cut(s) | 1253, 1267 |
| BspPI | GGATC | 4 cut(s) | 958, 979, 1124, 1137 |
| BspTNI | GGTCTC | 1 cut(s) | 150 |
| BsrDI | GCAATG | 1 cut(s) | 245 |
| BsrI | ACTGG | 2 cut(s) | 1060, 1313 |
| BssECI | CCNNGG | 2 cut(s) | 426, 1041 |
| BssMI | GATC | 7 cut(s) | 226, 799, 950, 984, 1129, 1275, 1427 |
| BssNAI | GTATAC | 1 cut(s) | 1193 |
| BssT1I | CCWWGG | 2 cut(s) | 426, 1041 |
| Bst1107I | GTATAC | 1 cut(s) | 1193 |
| Bst2UI | CCWGG | 2 cut(s) | 997, 1197 |
| Bst4CI | ACNGT | 2 cut(s) | 698, 749 |
| Bst6I | CTCTTC | 3 cut(s) | 796, 1314, 1459 |
| BstC8I | GCNNGC | 4 cut(s) | 381, 505, 868, 1472 |
| BstDEI | CTNAG | 2 cut(s) | 303, 362 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 323 |
| BstF5I | GGATG | 3 cut(s) | 352, 487, 1054 |
| BstKTI | GATC | 7 cut(s) | 229, 802, 953, 987, 1132, 1278, 1430 |
| BstMAI | GTCTC | 4 cut(s) | 92, 150, 582, 1021 |
| BstMBI | GATC | 7 cut(s) | 226, 799, 950, 984, 1129, 1275, 1427 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 385 |
| BstNI | CCWGG | 2 cut(s) | 997, 1197 |
| BstNSI | RCATGY | 5 cut(s) | 374, 383, 827, 1232, 1478 |
| BstSCI | CCNGG | 2 cut(s) | 995, 1195 |
| BstSFI | CTRYAG | 2 cut(s) | 1161, 1260 |
| BstV1I | GCAGC | 3 cut(s) | 752, 817, 1024 |
| BstV2I | GAAGAC | 1 cut(s) | 1224 |
| BstX2I | RGATCY | 1 cut(s) | 1129 |
| BstYI | RGATCY | 1 cut(s) | 1129 |
| BstZ17I | GTATAC | 1 cut(s) | 1193 |
| BsuI | GTATCC | 1 cut(s) | 813 |
| BsuRI | GGCC | 3 cut(s) | 535, 709, 717 |
| BtgZI | GCGATG | 1 cut(s) | 771 |
| BtsCI | GGATG | 3 cut(s) | 352, 487, 1054 |
| BtsI | GCAGTG | 2 cut(s) | 1158, 1303 |
| BtsIMutI | CAGTG | 5 cut(s) | 561, 837, 1158, 1303, 1320 |
| BveI | ACCTGC | 2 cut(s) | 1253, 1267 |
| Cac8I | GCNNGC | 4 cut(s) | 381, 505, 868, 1472 |
| CciI | TCATGA | 1 cut(s) | 496 |
| Cfr13I | GGNCC | 2 cut(s) | 453, 533 |
| CsiI | ACCWGGT | 1 cut(s) | 1195 |
| Csp6I | GTAC | 3 cut(s) | 351, 780, 1205 |
| CviQI | GTAC | 3 cut(s) | 351, 780, 1205 |
| DdeI | CTNAG | 2 cut(s) | 303, 362 |
| DpnI | GATC | 7 cut(s) | 228, 801, 952, 986, 1131, 1277, 1429 |
| DpnII | GATC | 7 cut(s) | 226, 799, 950, 984, 1129, 1275, 1427 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 188 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 188 |
| EaeI | YGGCCR | 1 cut(s) | 715 |
| Eam1104I | CTCTTC | 3 cut(s) | 796, 1314, 1459 |
| EarI | CTCTTC | 3 cut(s) | 796, 1314, 1459 |
| EciI | GGCGGA | 1 cut(s) | 33 |
| Eco130I | CCWWGG | 2 cut(s) | 426, 1041 |
| Eco24I | GRGCYC | 1 cut(s) | 1424 |
| Eco31I | GGTCTC | 1 cut(s) | 150 |
| Eco47I | GGWCC | 1 cut(s) | 453 |
| Eco57I | CTGAAG | 2 cut(s) | 861, 1236 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 323 |
| EcoRI | GAATTC | 1 cut(s) | 761 |
| EcoRII | CCWGG | 2 cut(s) | 995, 1195 |
| EcoT14I | CCWWGG | 2 cut(s) | 426, 1041 |
| EcoT38I | GRGCYC | 1 cut(s) | 1424 |
| ErhI | CCWWGG | 2 cut(s) | 426, 1041 |
| FaqI | GGGAC | 2 cut(s) | 905, 1099 |
| FbaI | TGATCA | 1 cut(s) | 226 |
| FblI | GTMKAC | 2 cut(s) | 1064, 1192 |
| Fnu4HI | GCNGC | 4 cut(s) | 707, 741, 806, 1038 |
| FokI | GGATG | 3 cut(s) | 359, 494, 1061 |
| FriOI | GRGCYC | 1 cut(s) | 1424 |
| Fsp4HI | GCNGC | 4 cut(s) | 707, 741, 806, 1038 |
| FspBI | CTAG | 4 cut(s) | 773, 1002, 1188, 1208 |
| GluI | GCNGC | 4 cut(s) | 707, 741, 806, 1038 |
| GsuI | CTGGAG | 2 cut(s) | 237, 1296 |
| HaeIII | GGCC | 3 cut(s) | 535, 709, 717 |
| HapII | CCGG | 2 cut(s) | 142, 536 |
| HincII | GTYRAC | 2 cut(s) | 588, 926 |
| HindII | GTYRAC | 2 cut(s) | 588, 926 |
| HindIII | AAGCTT | 2 cut(s) | 404, 843 |
| HinfI | GANTC | 4 cut(s) | 77, 542, 1055, 1379 |
| HpaII | CCGG | 2 cut(s) | 142, 536 |
| HphI | GGTGA | 2 cut(s) | 184, 1211 |
| Hpy166II | GTNNAC | 6 cut(s) | 393, 588, 694, 926, 1065, 1193 |
| Hpy188I | TCNGA | 7 cut(s) | 20, 91, 150, 231, 598, 1252, 1280 |
| Hpy188III | TCNNGA | 7 cut(s) | 254, 456, 466, 497, 898, 1172, 1425 |
| Hpy8I | GTNNAC | 6 cut(s) | 393, 588, 694, 926, 1065, 1193 |
| Hpy99I | CGWCG | 1 cut(s) | 288 |
| HpyAV | CCTTC | 7 cut(s) | 431, 441, 720, 746, 980, 1107, 1144 |
| HpyCH4III | ACNGT | 2 cut(s) | 698, 749 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 385 |
| HpyF3I | CTNAG | 2 cut(s) | 303, 362 |
| Ksp22I | TGATCA | 1 cut(s) | 226 |
| Kzo9I | GATC | 7 cut(s) | 226, 799, 950, 984, 1129, 1275, 1427 |
| LmnI | GCTCC | 2 cut(s) | 662, 691 |
| Lsp1109I | GCAGC | 3 cut(s) | 752, 817, 1024 |
| LweI | GCATC | 2 cut(s) | 490, 1156 |
| MabI | ACCWGGT | 1 cut(s) | 1195 |
| MaeI | CTAG | 4 cut(s) | 773, 1002, 1188, 1208 |
| MaeIII | GTNAC | 3 cut(s) | 190, 413, 546 |
| MalI | GATC | 7 cut(s) | 228, 801, 952, 986, 1131, 1277, 1429 |
| MboI | GATC | 7 cut(s) | 226, 799, 950, 984, 1129, 1275, 1427 |
| MboII | GAAGA | 9 cut(s) | 174, 177, 283, 783, 1229, 1331, 1357, 1462, 1476 |
| MfeI | CAATTG | 3 cut(s) | 111, 524, 681 |
| MflI | RGATCY | 1 cut(s) | 1129 |
| MhlI | GDGCHC | 2 cut(s) | 667, 1424 |
| MlsI | TGGCCA | 1 cut(s) | 717 |
| MluNI | TGGCCA | 1 cut(s) | 717 |
| MmeI | TCCRAC | 2 cut(s) | 928, 1459 |
| Mox20I | TGGCCA | 1 cut(s) | 717 |
| MroXI | GAANNNNTTC | 3 cut(s) | 389, 473, 1364 |
| MscI | TGGCCA | 1 cut(s) | 717 |
| MseI | TTAA | 4 cut(s) | 309, 903, 1077, 1119 |
| MslI | CAYNNNNRTG | 1 cut(s) | 569 |
| Msp20I | TGGCCA | 1 cut(s) | 717 |
| MspA1I | CMGCKG | 2 cut(s) | 743, 1037 |
| MspI | CCGG | 2 cut(s) | 142, 536 |
| MspR9I | CCNGG | 2 cut(s) | 997, 1197 |
| MunI | CAATTG | 3 cut(s) | 111, 524, 681 |
| Mva1269I | GAATGC | 1 cut(s) | 288 |
| MvaI | CCWGG | 2 cut(s) | 997, 1197 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 385 |
| NdeII | GATC | 7 cut(s) | 226, 799, 950, 984, 1129, 1275, 1427 |
| NlaIV | GGNNCC | 3 cut(s) | 454, 534, 1131 |
| NmuCI | GTSAC | 1 cut(s) | 190 |
| NspI | RCATGY | 5 cut(s) | 374, 383, 827, 1232, 1478 |
| PaeI | GCATGC | 1 cut(s) | 383 |
| PagI | TCATGA | 1 cut(s) | 496 |
| PciI | ACATGT | 1 cut(s) | 370 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 289 |
| PctI | GAATGC | 1 cut(s) | 288 |
| PdmI | GAANNNNTTC | 3 cut(s) | 389, 473, 1364 |
| PfeI | GAWTC | 4 cut(s) | 77, 542, 1055, 1379 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 70 |
| PkrI | GCNGC | 4 cut(s) | 708, 742, 807, 1039 |
| PscI | ACATGT | 1 cut(s) | 370 |
| PshBI | ATTAAT | 1 cut(s) | 903 |
| Psp6I | CCWGG | 2 cut(s) | 995, 1195 |
| PspGI | CCWGG | 2 cut(s) | 995, 1195 |
| PspN4I | GGNNCC | 3 cut(s) | 454, 534, 1131 |
| PspPI | GGNCC | 2 cut(s) | 453, 533 |
| PstI | CTGCAG | 2 cut(s) | 1165, 1264 |
| PsuI | RGATCY | 1 cut(s) | 1129 |
| PvuII | CAGCTG | 2 cut(s) | 743, 1037 |
| RsaI | GTAC | 3 cut(s) | 352, 781, 1206 |
| RsaNI | GTAC | 3 cut(s) | 351, 780, 1205 |
| RseI | CAYNNNNRTG | 1 cut(s) | 569 |
| SaqAI | TTAA | 4 cut(s) | 309, 903, 1077, 1119 |
| SatI | GCNGC | 4 cut(s) | 707, 741, 806, 1038 |
| Sau3AI | GATC | 7 cut(s) | 226, 799, 950, 984, 1129, 1275, 1427 |
| Sau96I | GGNCC | 2 cut(s) | 453, 533 |
| SbfI | CCTGCAGG | 1 cut(s) | 1264 |
| ScrFI | CCNGG | 2 cut(s) | 997, 1197 |
| SdaI | CCTGCAGG | 1 cut(s) | 1264 |
| SduI | GDGCHC | 2 cut(s) | 667, 1424 |
| SexAI | ACCWGGT | 1 cut(s) | 1195 |
| SfaNI | GCATC | 2 cut(s) | 490, 1156 |
| SfcI | CTRYAG | 2 cut(s) | 1161, 1260 |
| SinI | GGWCC | 1 cut(s) | 453 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 569 |
| SmlI | CTYRAG | 3 cut(s) | 95, 917, 1170 |
| SmoI | CTYRAG | 3 cut(s) | 95, 917, 1170 |
| SphI | GCATGC | 1 cut(s) | 383 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1264 |
| SsiI | CCGC | 4 cut(s) | 44, 174, 388, 706 |
| SspMI | CTAG | 4 cut(s) | 773, 1002, 1188, 1208 |
| StyD4I | CCNGG | 2 cut(s) | 995, 1195 |
| StyI | CCWWGG | 2 cut(s) | 426, 1041 |
| TaaI | ACNGT | 2 cut(s) | 698, 749 |
| TaqI | TCGA | 3 cut(s) | 49, 953, 1374 |
| TatI | WGTACW | 1 cut(s) | 1204 |
| TauI | GCSGC | 1 cut(s) | 709 |
| TfiI | GAWTC | 4 cut(s) | 77, 542, 1055, 1379 |
| Tru1I | TTAA | 4 cut(s) | 309, 903, 1077, 1119 |
| Tru9I | TTAA | 4 cut(s) | 309, 903, 1077, 1119 |
| TscAI | CASTG | 5 cut(s) | 561, 844, 1165, 1303, 1320 |
| TseFI | GTSAC | 1 cut(s) | 190 |
| TseI | GCWGC | 3 cut(s) | 740, 805, 1037 |
| Tsp45I | GTSAC | 1 cut(s) | 190 |
| TspDTI | ATGAA | 7 cut(s) | 24, 329, 485, 641, 774, 1061, 1269 |
| TspGWI | ACGGA | 2 cut(s) | 573, 1476 |
| TspRI | CASTG | 5 cut(s) | 561, 844, 1165, 1303, 1320 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 70 |
| VpaK11BI | GGWCC | 1 cut(s) | 453 |
| VspI | ATTAAT | 1 cut(s) | 903 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 323 |
| XapI | RAATTY | 3 cut(s) | 761, 1092, 1360 |
| XceI | RCATGY | 5 cut(s) | 374, 383, 827, 1232, 1478 |
| XmiI | GTMKAC | 2 cut(s) | 1064, 1192 |
| XmnI | GAANNNNTTC | 3 cut(s) | 389, 473, 1364 |
| XspI | CTAG | 4 cut(s) | 773, 1002, 1188, 1208 |