oligopeptide transporter
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| OPT | PF03169 | 52 - 714 | 2.6e-174 | OPT oligopeptide transporter protein |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1278 |
| Acc36I | ACCTGC | 1 cut(s) | 845 |
| Acc65I | GGTACC | 1 cut(s) | 1145 |
| AccB1I | GGYRCC | 1 cut(s) | 1145 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1462, 1689 |
| AccBSI | CCGCTC | 3 cut(s) | 241, 774, 785 |
| AccII | CGCG | 2 cut(s) | 203, 1784 |
| AclWI | GGATC | 3 cut(s) | 131, 2030, 2240 |
| AcoI | YGGCCR | 3 cut(s) | 297, 1597, 1983 |
| AcsI | RAATTY | 1 cut(s) | 1910 |
| AcuI | CTGAAG | 4 cut(s) | 237, 1352, 1686, 2029 |
| AdeI | CACNNNGTG | 1 cut(s) | 1689 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 244, 1381, 1382, 1462, 1689 |
| AflIII | ACRYGT | 3 cut(s) | 385, 576, 1782 |
| AgeI | ACCGGT | 1 cut(s) | 228 |
| AgsI | TTSAA | 8 cut(s) | 358, 373, 602, 1063, 1591, 1640, 1665, 2032 |
| AjnI | CCWGG | 5 cut(s) | 331, 361, 715, 1759, 1810 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1757, 1789 |
| Alw21I | GWGCWC | 1 cut(s) | 39 |
| Alw26I | GTCTC | 4 cut(s) | 610, 818, 1578, 1675 |
| AlwI | GGATC | 3 cut(s) | 131, 2030, 2240 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2111 |
| Ama87I | CYCGRG | 1 cut(s) | 1844 |
| AoxI | GGCC | 4 cut(s) | 297, 584, 1597, 1983 |
| ApeKI | GCWGC | 4 cut(s) | 805, 1316, 2093, 2247 |
| ApoI | RAATTY | 1 cut(s) | 1910 |
| AsiGI | ACCGGT | 1 cut(s) | 228 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 184, 215, 1058, 1856 |
| Asp718I | GGTACC | 1 cut(s) | 1145 |
| AspS9I | GGNCC | 6 cut(s) | 109, 365, 768, 843, 1680, 1808 |
| AsuC2I | CCSGG | 6 cut(s) | 1509, 1845, 1846, 1889, 1916, 2252 |
| AsuHPI | GGTGA | 3 cut(s) | 461, 561, 992 |
| AsuNHI | GCTAGC | 1 cut(s) | 1330 |
| AvaI | CYCGRG | 1 cut(s) | 1844 |
| AvaII | GGWCC | 6 cut(s) | 109, 365, 768, 843, 1680, 1808 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 188, 221 |
| BalI | TGGCCA | 3 cut(s) | 299, 1599, 1985 |
| BanI | GGYRCC | 1 cut(s) | 1145 |
| BanII | GRGCYC | 1 cut(s) | 1137 |
| BbsI | GAAGAC | 1 cut(s) | 676 |
| Bbv12I | GWGCWC | 1 cut(s) | 39 |
| BbvI | GCAGC | 4 cut(s) | 792, 1303, 2105, 2234 |
| BccI | CCATC | 6 cut(s) | 148, 458, 528, 743, 1412, 2055 |
| BciT130I | CCWGG | 5 cut(s) | 333, 363, 717, 1761, 1812 |
| BciVI | GTATCC | 4 cut(s) | 31, 1052, 1515, 1923 |
| BclI | TGATCA | 3 cut(s) | 393, 1009, 1488 |
| BcnI | CCSGG | 6 cut(s) | 1509, 1845, 1846, 1889, 1916, 2252 |
| BcoDI | GTCTC | 4 cut(s) | 610, 818, 1578, 1675 |
| BfaI | CTAG | 4 cut(s) | 284, 560, 1331, 1442 |
| BfmI | CTRYAG | 3 cut(s) | 894, 1090, 2091 |
| BfuAI | ACCTGC | 1 cut(s) | 845 |
| BfuI | GTATCC | 4 cut(s) | 31, 1052, 1515, 1923 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1529 |
| BglII | AGATCT | 1 cut(s) | 1622 |
| BisI | GCNGC | 6 cut(s) | 489, 492, 806, 1317, 2094, 2248 |
| BlpI | GCTNAGC | 1 cut(s) | 1136 |
| BlsI | GCNGC | 6 cut(s) | 490, 493, 807, 1318, 2095, 2249 |
| Bme18I | GGWCC | 6 cut(s) | 109, 365, 768, 843, 1680, 1808 |
| BmeT110I | CYCGRG | 1 cut(s) | 1844 |
| BmgT120I | GGNCC | 6 cut(s) | 109, 365, 768, 843, 1680, 1808 |
| BmiI | GGNNCC | 3 cut(s) | 770, 1147, 1681 |
| BmsI | GCATC | 3 cut(s) | 450, 1965, 2092 |
| BmtI | GCTAGC | 1 cut(s) | 1334 |
| BpiI | GAAGAC | 1 cut(s) | 676 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1546, 1578 |
| BpmI | CTGGAG | 3 cut(s) | 15, 441, 976 |
| Bpu10I | CCTNAGC | 3 cut(s) | 692, 1106, 2241 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1136 |
| BpuEI | CTTGAG | 1 cut(s) | 1548 |
| BpuMI | CCSGG | 6 cut(s) | 1509, 1845, 1846, 1889, 1916, 2252 |
| BsaI | GGTCTC | 1 cut(s) | 818 |
| BsaWI | WCCGGW | 3 cut(s) | 228, 413, 471 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1910, 1940 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 244, 1381, 1382, 1462, 1689 |
| Bse118I | RCCGGY | 1 cut(s) | 228 |
| Bse1I | ACTGG | 5 cut(s) | 149, 959, 1021, 1859, 2006 |
| Bse3DI | GCAATG | 1 cut(s) | 2197 |
| BseBI | CCWGG | 5 cut(s) | 333, 363, 717, 1761, 1812 |
| BseGI | GGATG | 9 cut(s) | 88, 441, 539, 936, 1771, 1824, 1854, 2066, 2082 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 244, 1381, 1382, 1462, 1689 |
| BseMI | GCAATG | 1 cut(s) | 2197 |
| BseMII | CTCAG | 5 cut(s) | 278, 530, 683, 1150, 1974 |
| BseNI | ACTGG | 5 cut(s) | 149, 959, 1021, 1859, 2006 |
| BseRI | GAGGAG | 2 cut(s) | 438, 650 |
| BseXI | GCAGC | 4 cut(s) | 792, 1303, 2105, 2234 |
| BsgI | GTGCAG | 1 cut(s) | 791 |
| Bsh1236I | CGCG | 2 cut(s) | 203, 1784 |
| Bsh1285I | CGRYCG | 1 cut(s) | 233 |
| BshFI | GGCC | 4 cut(s) | 299, 586, 1599, 1985 |
| BshNI | GGYRCC | 1 cut(s) | 1145 |
| BshTI | ACCGGT | 1 cut(s) | 228 |
| BsiEI | CGRYCG | 1 cut(s) | 233 |
| BsiHKAI | GWGCWC | 1 cut(s) | 39 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1844 |
| BsiSI | CCGG | 8 cut(s) | 229, 414, 472, 1508, 1845, 1889, 1916, 2252 |
| BslFI | GGGAC | 4 cut(s) | 698, 1398, 1693, 1871 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 244, 1381, 1382, 1462, 1689 |
| BsmAI | GTCTC | 4 cut(s) | 610, 818, 1578, 1675 |
| BsmFI | GGGAC | 4 cut(s) | 698, 1398, 1693, 1871 |
| BsmI | GAATGC | 1 cut(s) | 1110 |
| BsnI | GGCC | 4 cut(s) | 299, 586, 1599, 1985 |
| Bso31I | GGTCTC | 1 cut(s) | 818 |
| BsoBI | CYCGRG | 1 cut(s) | 1844 |
| Bsp1286I | GDGCHC | 2 cut(s) | 39, 1137 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1136 |
| Bsp19I | CCATGG | 1 cut(s) | 1376 |
| BspANI | GGCC | 4 cut(s) | 299, 586, 1599, 1985 |
| BspCNI | CTCAG | 5 cut(s) | 277, 529, 684, 1149, 1973 |
| BspFNI | CGCG | 2 cut(s) | 203, 1784 |
| BspLI | GGNNCC | 3 cut(s) | 770, 1147, 1681 |
| BspMAI | CTGCAG | 1 cut(s) | 2095 |
| BspMI | ACCTGC | 1 cut(s) | 845 |
| BspOI | GCTAGC | 1 cut(s) | 1334 |
| BspPI | GGATC | 3 cut(s) | 131, 2030, 2240 |
| BspT107I | GGYRCC | 1 cut(s) | 1145 |
| BspTNI | GGTCTC | 1 cut(s) | 818 |
| BsrBI | CCGCTC | 3 cut(s) | 241, 774, 785 |
| BsrDI | GCAATG | 1 cut(s) | 2197 |
| BsrFI | RCCGGY | 1 cut(s) | 228 |
| BsrI | ACTGG | 5 cut(s) | 149, 959, 1021, 1859, 2006 |
| BssAI | RCCGGY | 1 cut(s) | 228 |
| BssT1I | CCWWGG | 2 cut(s) | 1376, 1986 |
| Bst2UI | CCWGG | 5 cut(s) | 333, 363, 717, 1761, 1812 |
| Bst4CI | ACNGT | 7 cut(s) | 95, 121, 247, 812, 850, 885, 1669 |
| Bst6I | CTCTTC | 2 cut(s) | 72, 99 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2111 |
| BstC8I | GCNNGC | 4 cut(s) | 588, 1097, 1332, 2107 |
| BstDSI | CCRYGG | 3 cut(s) | 846, 1376, 1748 |
| BstEII | GGTNACC | 1 cut(s) | 224 |
| BstF5I | GGATG | 9 cut(s) | 88, 441, 539, 936, 1771, 1824, 1854, 2066, 2082 |
| BstFNI | CGCG | 2 cut(s) | 203, 1784 |
| BstMAI | GTCTC | 4 cut(s) | 610, 818, 1578, 1675 |
| BstMCI | CGRYCG | 1 cut(s) | 233 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 34, 425, 971, 1313, 1340, 1529, 2102, 2111 |
| BstNI | CCWGG | 5 cut(s) | 333, 363, 717, 1761, 1812 |
| BstNSI | RCATGY | 3 cut(s) | 389, 580, 1347 |
| BstPI | GGTNACC | 1 cut(s) | 224 |
| BstSFI | CTRYAG | 3 cut(s) | 894, 1090, 2091 |
| BstUI | CGCG | 2 cut(s) | 203, 1784 |
| BstV1I | GCAGC | 4 cut(s) | 792, 1303, 2105, 2234 |
| BstV2I | GAAGAC | 1 cut(s) | 676 |
| BstX2I | RGATCY | 1 cut(s) | 1622 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2175 |
| BstYI | RGATCY | 1 cut(s) | 1622 |
| BsuI | GTATCC | 4 cut(s) | 31, 1052, 1515, 1923 |
| BsuRI | GGCC | 4 cut(s) | 299, 586, 1599, 1985 |
| BtgI | CCRYGG | 3 cut(s) | 846, 1376, 1748 |
| BtgZI | GCGATG | 1 cut(s) | 1390 |
| BtsCI | GGATG | 9 cut(s) | 88, 441, 539, 936, 1771, 1824, 1854, 2066, 2082 |
| BtsI | GCAGTG | 1 cut(s) | 2109 |
| BtsIMutI | CAGTG | 2 cut(s) | 1014, 2109 |
| BveI | ACCTGC | 1 cut(s) | 845 |
| Cac8I | GCNNGC | 4 cut(s) | 588, 1097, 1332, 2107 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2111 |
| Cfr10I | RCCGGY | 1 cut(s) | 228 |
| Cfr13I | GGNCC | 6 cut(s) | 109, 365, 768, 843, 1680, 1808 |
| Cfr9I | CCCGGG | 1 cut(s) | 1844 |
| CseI | GACGC | 1 cut(s) | 1773 |
| CsiI | ACCWGGT | 1 cut(s) | 331 |
| CspAI | ACCGGT | 1 cut(s) | 228 |
| DraIII | CACNNNGTG | 1 cut(s) | 1689 |
| EaeI | YGGCCR | 3 cut(s) | 297, 1597, 1983 |
| Eam1104I | CTCTTC | 2 cut(s) | 72, 99 |
| EarI | CTCTTC | 2 cut(s) | 72, 99 |
| EciI | GGCGGA | 1 cut(s) | 927 |
| Eco130I | CCWWGG | 2 cut(s) | 1376, 1986 |
| Eco24I | GRGCYC | 1 cut(s) | 1137 |
| Eco31I | GGTCTC | 1 cut(s) | 818 |
| Eco47I | GGWCC | 6 cut(s) | 109, 365, 768, 843, 1680, 1808 |
| Eco57I | CTGAAG | 4 cut(s) | 237, 1352, 1686, 2029 |
| Eco88I | CYCGRG | 1 cut(s) | 1844 |
| Eco91I | GGTNACC | 1 cut(s) | 224 |
| EcoO65I | GGTNACC | 1 cut(s) | 224 |
| EcoRII | CCWGG | 5 cut(s) | 331, 361, 715, 1759, 1810 |
| EcoT14I | CCWWGG | 2 cut(s) | 1376, 1986 |
| EcoT22I | ATGCAT | 1 cut(s) | 1345 |
| EcoT38I | GRGCYC | 1 cut(s) | 1137 |
| ErhI | CCWWGG | 2 cut(s) | 1376, 1986 |
| FaqI | GGGAC | 4 cut(s) | 698, 1398, 1693, 1871 |
| FauI | CCCGC | 4 cut(s) | 246, 493, 532, 779 |
| FbaI | TGATCA | 3 cut(s) | 393, 1009, 1488 |
| Fnu4HI | GCNGC | 6 cut(s) | 489, 492, 806, 1317, 2094, 2248 |
| FokI | GGATG | 9 cut(s) | 95, 428, 546, 923, 1778, 1831, 1861, 2069, 2073 |
| FriOI | GRGCYC | 1 cut(s) | 1137 |
| Fsp4HI | GCNGC | 6 cut(s) | 489, 492, 806, 1317, 2094, 2248 |
| FspBI | CTAG | 4 cut(s) | 284, 560, 1331, 1442 |
| GluI | GCNGC | 6 cut(s) | 489, 492, 806, 1317, 2094, 2248 |
| GsuI | CTGGAG | 3 cut(s) | 15, 441, 976 |
| HaeIII | GGCC | 4 cut(s) | 299, 586, 1599, 1985 |
| HapII | CCGG | 8 cut(s) | 229, 414, 472, 1508, 1845, 1889, 1916, 2252 |
| HgaI | GACGC | 1 cut(s) | 1773 |
| HindIII | AAGCTT | 2 cut(s) | 1097, 2161 |
| HinfI | GANTC | 8 cut(s) | 47, 304, 475, 566, 669, 1612, 1800, 1939 |
| HpaII | CCGG | 8 cut(s) | 229, 414, 472, 1508, 1845, 1889, 1916, 2252 |
| HphI | GGTGA | 3 cut(s) | 461, 561, 992 |
| Hpy166II | GTNNAC | 6 cut(s) | 211, 329, 565, 846, 1752, 1824 |
| Hpy188I | TCNGA | 6 cut(s) | 267, 1125, 1483, 1583, 1620, 1938 |
| Hpy8I | GTNNAC | 6 cut(s) | 211, 329, 565, 846, 1752, 1824 |
| Hpy99I | CGWCG | 3 cut(s) | 137, 1789, 2240 |
| HpyAV | CCTTC | 9 cut(s) | 373, 625, 641, 741, 950, 1207, 1426, 1684, 1809 |
| HpyCH4III | ACNGT | 7 cut(s) | 95, 121, 247, 812, 850, 885, 1669 |
| HpyCH4V | TGCA | 9 cut(s) | 590, 808, 854, 1252, 1343, 1904, 1996, 2093, 2105 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 34, 425, 971, 1313, 1340, 1529, 2102, 2111 |
| KpnI | GGTACC | 1 cut(s) | 1149 |
| Ksp22I | TGATCA | 3 cut(s) | 393, 1009, 1488 |
| LmnI | GCTCC | 7 cut(s) | 416, 425, 957, 1201, 1377, 1737, 1885 |
| Lsp1109I | GCAGC | 4 cut(s) | 792, 1303, 2105, 2234 |
| LweI | GCATC | 3 cut(s) | 450, 1965, 2092 |
| MabI | ACCWGGT | 1 cut(s) | 331 |
| MaeI | CTAG | 4 cut(s) | 284, 560, 1331, 1442 |
| MaeIII | GTNAC | 5 cut(s) | 224, 778, 1025, 1718, 2142 |
| MbiI | CCGCTC | 3 cut(s) | 241, 774, 785 |
| MflI | RGATCY | 1 cut(s) | 1622 |
| MhlI | GDGCHC | 2 cut(s) | 39, 1137 |
| MlsI | TGGCCA | 3 cut(s) | 299, 1599, 1985 |
| MluCI | AATT | 6 cut(s) | 214, 340, 901, 1273, 1910, 2212 |
| MluI | ACGCGT | 1 cut(s) | 1782 |
| MluNI | TGGCCA | 3 cut(s) | 299, 1599, 1985 |
| MlyI | GAGTC | 3 cut(s) | 56, 298, 560 |
| MmeI | TCCRAC | 1 cut(s) | 1561 |
| Mox20I | TGGCCA | 3 cut(s) | 299, 1599, 1985 |
| Mph1103I | ATGCAT | 1 cut(s) | 1345 |
| MroXI | GAANNNNTTC | 4 cut(s) | 184, 215, 1058, 1856 |
| MscI | TGGCCA | 3 cut(s) | 299, 1599, 1985 |
| MseI | TTAA | 4 cut(s) | 116, 456, 1470, 1536 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1727 |
| Msp20I | TGGCCA | 3 cut(s) | 299, 1599, 1985 |
| MspI | CCGG | 8 cut(s) | 229, 414, 472, 1508, 1845, 1889, 1916, 2252 |
| Mva1269I | GAATGC | 1 cut(s) | 1110 |
| MvaI | CCWGG | 5 cut(s) | 333, 363, 717, 1761, 1812 |
| MvnI | CGCG | 2 cut(s) | 203, 1784 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 34, 425, 971, 1313, 1340, 1529, 2102, 2111 |
| NciI | CCSGG | 6 cut(s) | 1509, 1845, 1846, 1889, 1916, 2252 |
| NcoI | CCATGG | 1 cut(s) | 1376 |
| NheI | GCTAGC | 1 cut(s) | 1330 |
| NlaIV | GGNNCC | 3 cut(s) | 770, 1147, 1681 |
| NmeAIII | GCCGAG | 1 cut(s) | 795 |
| NsiI | ATGCAT | 1 cut(s) | 1345 |
| NspI | RCATGY | 3 cut(s) | 389, 580, 1347 |
| PasI | CCCWGGG | 1 cut(s) | 1760 |
| PciI | ACATGT | 2 cut(s) | 385, 576 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 63, 1641 |
| PctI | GAATGC | 1 cut(s) | 1110 |
| PdmI | GAANNNNTTC | 4 cut(s) | 184, 215, 1058, 1856 |
| PfeI | GAWTC | 5 cut(s) | 475, 669, 1612, 1800, 1939 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1462, 1689 |
| PfoI | TCCNGGA | 3 cut(s) | 1507, 1810, 1914 |
| PinAI | ACCGGT | 1 cut(s) | 228 |
| PkrI | GCNGC | 6 cut(s) | 490, 493, 807, 1318, 2095, 2249 |
| PleI | GAGTC | 3 cut(s) | 55, 298, 560 |
| PpsI | GAGTC | 3 cut(s) | 55, 298, 560 |
| PscI | ACATGT | 2 cut(s) | 385, 576 |
| PsiI | TTATAA | 1 cut(s) | 1278 |
| Psp6I | CCWGG | 5 cut(s) | 331, 361, 715, 1759, 1810 |
| PspEI | GGTNACC | 1 cut(s) | 224 |
| PspGI | CCWGG | 5 cut(s) | 331, 361, 715, 1759, 1810 |
| PspN4I | GGNNCC | 3 cut(s) | 770, 1147, 1681 |
| PspPI | GGNCC | 6 cut(s) | 109, 365, 768, 843, 1680, 1808 |
| PstI | CTGCAG | 1 cut(s) | 2095 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2111 |
| PsuI | RGATCY | 1 cut(s) | 1622 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1727 |
| SaqAI | TTAA | 4 cut(s) | 116, 456, 1470, 1536 |
| SatI | GCNGC | 6 cut(s) | 489, 492, 806, 1317, 2094, 2248 |
| Sau96I | GGNCC | 6 cut(s) | 109, 365, 768, 843, 1680, 1808 |
| SchI | GAGTC | 3 cut(s) | 56, 298, 560 |
| SduI | GDGCHC | 2 cut(s) | 39, 1137 |
| SexAI | ACCWGGT | 1 cut(s) | 331 |
| SfaNI | GCATC | 3 cut(s) | 450, 1965, 2092 |
| SfcI | CTRYAG | 3 cut(s) | 894, 1090, 2091 |
| SinI | GGWCC | 6 cut(s) | 109, 365, 768, 843, 1680, 1808 |
| SmaI | CCCGGG | 1 cut(s) | 1846 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1727 |
| SmlI | CTYRAG | 1 cut(s) | 1563 |
| SmoI | CTYRAG | 1 cut(s) | 1563 |
| Sse9I | AATT | 6 cut(s) | 214, 340, 901, 1273, 1910, 2212 |
| SspI | AATATT | 1 cut(s) | 1066 |
| SspMI | CTAG | 4 cut(s) | 284, 560, 1331, 1442 |
| StyI | CCWWGG | 2 cut(s) | 1376, 1986 |
| TaaI | ACNGT | 7 cut(s) | 95, 121, 247, 812, 850, 885, 1669 |
| TaqI | TCGA | 5 cut(s) | 15, 102, 233, 1707, 1787 |
| TaqII | GACCGA | 1 cut(s) | 1796 |
| TasI | AATT | 6 cut(s) | 214, 340, 901, 1273, 1910, 2212 |
| TatI | WGTACW | 2 cut(s) | 388, 1572 |
| TauI | GCSGC | 2 cut(s) | 491, 494 |
| TfiI | GAWTC | 5 cut(s) | 475, 669, 1612, 1800, 1939 |
| Tru1I | TTAA | 4 cut(s) | 116, 456, 1470, 1536 |
| Tru9I | TTAA | 4 cut(s) | 116, 456, 1470, 1536 |
| TscAI | CASTG | 2 cut(s) | 1021, 2116 |
| TseI | GCWGC | 4 cut(s) | 805, 1316, 2093, 2247 |
| TspDTI | ATGAA | 8 cut(s) | 84, 99, 392, 1280, 1621, 1622, 1865, 1931 |
| TspGWI | ACGGA | 5 cut(s) | 101, 152, 314, 1200, 1737 |
| TspMI | CCCGGG | 1 cut(s) | 1844 |
| TspRI | CASTG | 2 cut(s) | 1021, 2116 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1462, 1689 |
| VpaK11BI | GGWCC | 6 cut(s) | 109, 365, 768, 843, 1680, 1808 |
| XapI | RAATTY | 1 cut(s) | 1910 |
| XceI | RCATGY | 3 cut(s) | 389, 580, 1347 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 520 |
| XmaI | CCCGGG | 1 cut(s) | 1844 |
| XmnI | GAANNNNTTC | 4 cut(s) | 184, 215, 1058, 1856 |
| XspI | CTAG | 4 cut(s) | 284, 560, 1331, 1442 |
| Zsp2I | ATGCAT | 1 cut(s) | 1345 |