Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0000850

Physical Location & Seq

Genomic Coordinates Reverse (-)

82702788 .. 82706388

Gene Structure 3601 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG536000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2292 bp

ATGACAGGTTTGGTTGACGATGGGGCTTCTCCAGGAGACCTCTCTAAGAGGGATCACTTTGACATTGACGTTATTGCATTGTGTTGTCATTGGGTTCATGTGGCAGATGATGAAGTGAATGACAACCCTATTGAAGAAGTCAGGCTCACTGTTCCGATCACCGATGACCCTTCTCAACCAACCTTGACATTTCGGACGTGGGTTCTGGGCATACTCTCATGCGCCATTCTTGCCTTTGTCAACAAGTTTTTCGCATACCGCCAAAACCCGCTCTCTGTGGGATCAGTCTCAGCACAAATTCTTGTCCTCCCTCTGGGGAAGTTGATGGCTGCAACCCTCCCAACTAATCAATTACGGGTCCCCTTTACAAAATGGACATTTTCGATGAATCCGGGGCCTTTCAATCTGAAAGAGCATGTGCTTATCACCATATTTGCCAGCTCTGGAGCAAGCGGTGTCTATGCTGTGCATATGATCACAATGGTTCTGGCTTTTTACAAAAGGAATCTGCATCCTGCATCAGCCTTCTTGTTAGCACAAACCACACAGATGCTTGGGTACGGATGGGCTGGCCTATTCAGAAGATACCTTGTTGACTCTCCTTACATGTGGTGGCCGTCAAATCTGGTTCAAGTCTCTCTATTCAGGGCATTGCATGAAAAGGAAAAAAGACCAAAGGGAGGCCGTACAAGGCTACAATTCTTCTTCTTGGTTTTCATATGCAGCTTTGCTTACTACATTGTTCCAGCTTACCTTTTCCCCTCCATATCTACTATCTCCATTGTTTGTTTGATATGGAAGAACTCCATAACTGCCCAACAGATTGGTTCCGGAGTCCATGGACTTGGTATTGGCTCGTTTGGACTCGATTGGTCTACTGTTGCTGGTTTCTTAGGCAGTCCATTGGCTACACCAGGATTTGCCAACATTAACTTCTTACTTGGTTTTGTTCTGATTGTCTACATTGCTGCCCCCATTGCTTATTGGAACAATGCATATGGTTTTCAGAGGTTCCCACTTATTTCCTCTCATACTTTTGATGCGATGGGAAACACTTACAACATTTCCAGGATTCTAAATCAGAAAAGTTTCGACATCAATATGTCAGAATATAATAGCTACAGCAAAGTCCATCTCAGTACCTTCTTTGCCTTCACTTATGGACTGAGCTTTGCCAGTCTCACCGCTACAATTTCACATGTTGCACTTTTCTATGGAAAAACAATCTGGCACATGTGGAGAAAGACAGCTAGTTCTGTGAAAGCTCAAGTTAATGACATCCACACAAGGCTGATGAAGAAGAATTATGAAGCAGTCCCTCAATGGTGGTTTCACGTCATCCTTGTCTCAATGATTGGTCTTTCCATCTTCACTTGTGAAGGTTTTGGCAAACAGCTCCAACTTCCATGGTGGGGAGTTTTAATGGCTTGTGGCATTGCATTGTTCTTCACCTTACCCGTTGGCATTATTAATGCCACGACAAATACGGGAACTGGGATTAATGTGATTACAGAGATGGTTATCGGGTATATTTATCCAGGCAAGCCTCTTGCGAATGCGGCCTTCAAGACCTATGGCACTATCAGCATGTCACAAGCACTCTCGTTTCTTACTGACTTCAAATTGGGTCACTATATGAAGATTCCTCCAAAATCCATGTTTGTTGTCCAGTTAGCTGGAACAGTAATTGCTTCTAGTGTCCAATTTGCCACATCTTGGTGGCTTCTCCACTCCATTGAGAACATCTGCGATGTCTCAAAGTTGCCGGATGGAAGTCCATGGACATGTCCCGGCGATGATGTCTTCTACAATGCTTCAATCATATGGGGAGTTGTCGGCCCGCTCAGAATGTTCGCCAACAAAGGCATCTACCCGGAGTTGAACTGGTTCTTCCTCCTCGGTTTACTTGCGCCTGTTCCAGTCTGGTTCTTCTCCAAGAAATTCCCAAATCAAAAGTGGATTAAGCTCATAAACATGCCTATCATTATTGGAGCAGCTCAGGGTATTCCACCTGCTGGACCTGTCCACTACATTACATATGGAGCAGTTGCCATCTTCTTCAACTTCTATGTGTACAGAAAGTTCAAAGGCTGGTGGGCTAGGCATAACTACATCCTCTCAGCTGCTTTGGATGCTGGTGTGGCCTTCGCAGGAGTTCTCTTATATTTCGCACTTCAAAGTAAGGACATTATAGGGCCAAACTGGTGGGGTCTTGACAATAATGATCATTGCCCATTGGCCCGTTGCCCTACTGCACCAGGAGTAGTGGCCAAAGGGTGCCCAGTTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

763

Amino Acids

84.94

Weight (kDa)

9.16

Isoelectric Point (pI)

34.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	62 - 724	2.5e-164	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000850)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26590 AT5G55930
fragaria_vesca	FvH4_3g42570 FvH4_3g42651 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660
malus_domestica	MD03G1029800.v1.1 MD03G1029900.v1.1 MD03G1030000.v1.1 MD07G1217200.v1.1 MD11G1034800.v1.1 MD11G1035000.v1.1 MD11G1035100.v1.1
prunus_persica	Prupe.6G026000_v2.0.a1 Prupe.6G026100_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026300_v2.0.a1
pyrus_communis	pycom03g02480 pycom03g02500 pycom11g02890 pycom11g02900
rosa_chinensis	RchiOBHm_Chr5g0076291 RchiOBHm_Chr5g0076301 RchiOBHm_Chr5g0076311 RchiOBHm_Chr5g0076621 RchiOBHm_Chr5g0076671
rosa_laevigata	RLG00000036614 RLG00000036615 RLG00000036616 RLG00000036617
rosa_multiflora	Rmu_co8320621.1_g000001 Rmu_co8419599.1_g000001 Rmu_co8455339.1_g000001 Rmu_sc0005961.1_g000002 Rmu_sc0005961.1_g000003 Rmu_sc0013948.1_g000002 Rmu_sc0035770.1_g000001 Rmu_sc0040547.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005490 Rroxscaffold_1G00005550 Rroxscaffold_1G00005560 Rroxscaffold_1G00005570
rosa_rugosa	Rorug05G0446700.1 Rorug05G0447000 Rorug05G0447100 Rorug05G0447200 Rorug05G0447200 Rorug05G0447300
rosa_samantha	Rh5AG501900 Rh5AG502000 Rh5AG502100 Rh5BG523700 Rh5BG523800 Rh5BG523900 Rh5CG547400 Rh5CG547500 Rh5CG547600 Rh5DG535900 Rh5DG536000 Rh5DG536100 Rh7AG436800
rosa_wichuraiana	Rw0G015040 Rw0G015060 Rw5G046590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2020
Acc36I	ACCTGC	1 cut(s)	2020
AccB1I	GGYRCC	1 cut(s)	2277
AccB7I	CCANNNNNTGG	2 cut(s)	1716, 2015
AccBSI	CCGCTC	2 cut(s)	271, 1843
AccI	GTMKAC	2 cut(s)	875, 960
AccIII	TCCGGA	1 cut(s)	830
AciI	CCGC	6 cut(s)	259, 269, 453, 1185, 1559, 1841
AclWI	GGATC	2 cut(s)	60, 289
AcoI	YGGCCR	2 cut(s)	614, 2268
AcsI	RAATTY	2 cut(s)	297, 1940
AfaI	GTAC	4 cut(s)	560, 688, 1141, 2075
AfiI	CCNNNNNNNGG	5 cut(s)	313, 680, 1412, 1716, 2015
AflIII	ACRYGT	4 cut(s)	606, 1198, 1233, 1784
AjiI	CACGTC	2 cut(s)	198, 1336
AjnI	CCWGG	5 cut(s)	31, 913, 1067, 1537, 2257
AjuI	GAANNNNNNNTTGG	2 cut(s)	917, 949
Alw26I	GTCTC	6 cut(s)	30, 292, 640, 1184, 1351, 1759
AlwI	GGATC	2 cut(s)	60, 289
Aor13HI	TCCGGA	1 cut(s)	830
ApeKI	GCWGC	5 cut(s)	329, 723, 968, 1994, 2123
ApoI	RAATTY	2 cut(s)	297, 1940
AseI	ATTAAT	2 cut(s)	1470, 1500
Asp700I	GAANNNNTTC	2 cut(s)	1088, 1886
AspLEI	GCGC	2 cut(s)	224, 1912
AspS9I	GGNCC	6 cut(s)	358, 395, 1838, 2018, 2195, 2239
AsuC2I	CCSGG	3 cut(s)	393, 1791, 1874
AsuHPI	GGTGA	4 cut(s)	151, 418, 1174, 1441
AvaII	GGWCC	2 cut(s)	358, 2018
BaeGI	GKGCMC	1 cut(s)	2282
BalI	TGGCCA	1 cut(s)	2270
BanI	GGYRCC	1 cut(s)	2277
BbsI	GAAGAC	1 cut(s)	1795
BbvI	GCAGC	5 cut(s)	316, 735, 955, 2006, 2110
BccI	CCATC	9 cut(s)	14, 319, 558, 1039, 1140, 1373, 1510, 1763, 2060
BceAI	ACGGC	2 cut(s)	601, 669
BciT130I	CCWGG	5 cut(s)	33, 915, 1069, 1539, 2259
BclI	TGATCA	2 cut(s)	474, 2224
BcnI	CCSGG	3 cut(s)	393, 1791, 1874
BcoDI	GTCTC	6 cut(s)	30, 292, 640, 1184, 1351, 1759
BfaI	CTAG	3 cut(s)	1251, 1695, 2100
BfmI	CTRYAG	1 cut(s)	1120
BfuAI	ACCTGC	1 cut(s)	2020
BisI	GCNGC	6 cut(s)	330, 724, 969, 1560, 1995, 2124
BlsI	GCNGC	6 cut(s)	331, 725, 970, 1561, 1996, 2125
Bme1390I	CCNGG	8 cut(s)	33, 393, 915, 1069, 1539, 1791, 1874, 2259
Bme18I	GGWCC	2 cut(s)	358, 2018
BmgBI	CACGTC	2 cut(s)	198, 1336
BmgT120I	GGNCC	6 cut(s)	358, 395, 1838, 2018, 2195, 2239
BmiI	GGNNCC	6 cut(s)	359, 360, 396, 829, 1013, 2279
BmrFI	CCNGG	8 cut(s)	33, 393, 915, 1069, 1539, 1791, 1874, 2259
BmrI	ACTGGG	2 cut(s)	1503, 2276
BmsI	GCATC	6 cut(s)	520, 527, 540, 1030, 1875, 2122
BmuI	ACTGGG	2 cut(s)	1503, 2276
BpiI	GAAGAC	1 cut(s)	1795
BpmI	CTGGAG	2 cut(s)	15, 465
Bpu10I	CCTNAGC	1 cut(s)	1998
BpuEI	CTTGAG	1 cut(s)	1251
BpuMI	CCSGG	3 cut(s)	393, 1791, 1874
BsaBI	GATNNNNATC	1 cut(s)	1520
BsaI	GGTCTC	1 cut(s)	30
BsaJI	CCNNGG	5 cut(s)	392, 838, 1406, 1778, 1897
BsaWI	WCCGGW	1 cut(s)	830
Bsc4I	CCNNNNNNNGG	5 cut(s)	313, 680, 1412, 1716, 2015
Bse1I	ACTGG	7 cut(s)	1176, 1498, 1669, 1889, 1919, 2207, 2282
Bse3DI	GCAATG	5 cut(s)	650, 963, 975, 1434, 2227
Bse8I	GATNNNNATC	1 cut(s)	1520
BseAI	TCCGGA	1 cut(s)	830
BseBI	CCWGG	5 cut(s)	33, 915, 1069, 1539, 2259
BseDI	CCNNGG	5 cut(s)	392, 838, 1406, 1778, 1897
BseGI	GGATG	7 cut(s)	511, 569, 1278, 1338, 1774, 2112, 2137
BseJI	GATNNNNATC	1 cut(s)	1520
BseLI	CCNNNNNNNGG	5 cut(s)	313, 680, 1412, 1716, 2015
BseMI	GCAATG	5 cut(s)	650, 963, 975, 1434, 2227
BseMII	CTCAG	6 cut(s)	303, 1150, 1157, 1858, 2012, 2133
BseNI	ACTGG	7 cut(s)	1176, 1498, 1669, 1889, 1919, 2207, 2282
BseRI	GAGGAG	1 cut(s)	1886
BseSI	GKGCMC	1 cut(s)	2282
BseXI	GCAGC	5 cut(s)	316, 735, 955, 2006, 2110
BsgI	GTGCAG	1 cut(s)	2238
BshNI	GGYRCC	1 cut(s)	2277
BsiSI	CCGG	5 cut(s)	392, 831, 1766, 1791, 1874
BslFI	GGGAC	3 cut(s)	344, 1301, 1773
BslI	CCNNNNNNNGG	5 cut(s)	313, 680, 1412, 1716, 2015
BsmAI	GTCTC	6 cut(s)	30, 292, 640, 1184, 1351, 1759
BsmFI	GGGAC	3 cut(s)	344, 1301, 1773
BsmI	GAATGC	1 cut(s)	1561
Bso31I	GGTCTC	1 cut(s)	30
Bsp1286I	GDGCHC	1 cut(s)	2282
Bsp13I	TCCGGA	1 cut(s)	830
Bsp1407I	TGTACA	1 cut(s)	2073
Bsp143I	GATC	5 cut(s)	52, 156, 281, 474, 2224
Bsp19I	CCATGG	3 cut(s)	838, 1406, 1778
BspACI	CCGC	6 cut(s)	259, 269, 453, 1185, 1559, 1841
BspCNI	CTCAG	6 cut(s)	302, 1149, 1158, 1857, 2011, 2132
BspEI	TCCGGA	1 cut(s)	830
BspLI	GGNNCC	6 cut(s)	359, 360, 396, 829, 1013, 2279
BspMI	ACCTGC	1 cut(s)	2020
BspPI	GGATC	2 cut(s)	60, 289
BspT107I	GGYRCC	1 cut(s)	2277
BspTNI	GGTCTC	1 cut(s)	30
BsrBI	CCGCTC	2 cut(s)	271, 1843
BsrDI	GCAATG	5 cut(s)	650, 963, 975, 1434, 2227
BsrGI	TGTACA	1 cut(s)	2073
BsrI	ACTGG	7 cut(s)	1176, 1498, 1669, 1889, 1919, 2207, 2282
BssECI	CCNNGG	5 cut(s)	392, 838, 1406, 1778, 1897
BssMI	GATC	5 cut(s)	52, 156, 281, 474, 2224
BssT1I	CCWWGG	3 cut(s)	838, 1406, 1778
Bst2UI	CCWGG	5 cut(s)	33, 915, 1069, 1539, 2259
Bst4CI	ACNGT	3 cut(s)	151, 880, 1684
BstAUI	TGTACA	1 cut(s)	2073
BstC8I	GCNNGC	5 cut(s)	439, 451, 571, 1544, 1841
BstDEI	CTNAG	8 cut(s)	45, 289, 892, 1136, 1166, 1844, 1998, 2119
BstDSI	CCRYGG	3 cut(s)	838, 1406, 1778
BstF5I	GGATG	7 cut(s)	511, 569, 1278, 1338, 1774, 2112, 2137
BstHHI	GCGC	2 cut(s)	224, 1912
BstKTI	GATC	5 cut(s)	55, 159, 284, 477, 2227
BstMAI	GTCTC	6 cut(s)	30, 292, 640, 1184, 1351, 1759
BstMBI	GATC	5 cut(s)	52, 156, 281, 474, 2224
BstMWI	GCNNNNNNNGC	6 cut(s)	230, 977, 1559, 1584, 2132, 2141
BstNI	CCWGG	5 cut(s)	33, 915, 1069, 1539, 2259
BstNSI	RCATGY	7 cut(s)	419, 610, 1202, 1237, 1591, 1788, 1978
BstSCI	CCNGG	8 cut(s)	31, 391, 913, 1067, 1537, 1789, 1872, 2257
BstSFI	CTRYAG	1 cut(s)	1120
BstSLI	GKGCMC	1 cut(s)	2282
BstV1I	GCAGC	5 cut(s)	316, 735, 955, 2006, 2110
BstV2I	GAAGAC	1 cut(s)	1795
BstXI	CCANNNNNNTGG	4 cut(s)	824, 845, 1676, 2205
BtgI	CCRYGG	3 cut(s)	838, 1406, 1778
BtgZI	GCGATG	3 cut(s)	1058, 1764, 1809
BtrI	CACGTC	2 cut(s)	198, 1336
BtsCI	GGATG	7 cut(s)	511, 569, 1278, 1338, 1774, 2112, 2137
BtsIMutI	CAGTG	1 cut(s)	147
BveI	ACCTGC	1 cut(s)	2020
Cac8I	GCNNGC	5 cut(s)	439, 451, 571, 1544, 1841
CfoI	GCGC	2 cut(s)	224, 1912
Cfr13I	GGNCC	6 cut(s)	358, 395, 1838, 2018, 2195, 2239
Csp6I	GTAC	4 cut(s)	559, 687, 1140, 2074
CviQI	GTAC	4 cut(s)	559, 687, 1140, 2074
DdeI	CTNAG	8 cut(s)	45, 289, 892, 1136, 1166, 1844, 1998, 2119
DpnI	GATC	5 cut(s)	54, 158, 283, 476, 2226
DpnII	GATC	5 cut(s)	52, 156, 281, 474, 2224
EaeI	YGGCCR	2 cut(s)	614, 2268
Eco130I	CCWWGG	3 cut(s)	838, 1406, 1778
Eco31I	GGTCTC	1 cut(s)	30
Eco47I	GGWCC	2 cut(s)	358, 2018
EcoO109I	RGGNCCY	2 cut(s)	358, 395
EcoRII	CCWGG	5 cut(s)	31, 913, 1067, 1537, 2257
EcoT14I	CCWWGG	3 cut(s)	838, 1406, 1778
EcoT22I	ATGCAT	1 cut(s)	997
ErhI	CCWWGG	3 cut(s)	838, 1406, 1778
FaqI	GGGAC	3 cut(s)	344, 1301, 1773
FauI	CCCGC	2 cut(s)	276, 1848
FauNDI	CATATG	5 cut(s)	471, 719, 997, 1823, 2038
FbaI	TGATCA	2 cut(s)	474, 2224
FblI	GTMKAC	2 cut(s)	875, 960
Fnu4HI	GCNGC	6 cut(s)	330, 724, 969, 1560, 1995, 2124
FokI	GGATG	7 cut(s)	498, 576, 1265, 1325, 1781, 2099, 2144
Fsp4HI	GCNGC	6 cut(s)	330, 724, 969, 1560, 1995, 2124
FspBI	CTAG	3 cut(s)	1251, 1695, 2100
GlaI	GCGC	2 cut(s)	223, 1911
GluI	GCNGC	6 cut(s)	330, 724, 969, 1560, 1995, 2124
GsuI	CTGGAG	2 cut(s)	15, 465
HapII	CCGG	5 cut(s)	392, 831, 1766, 1791, 1874
HhaI	GCGC	2 cut(s)	224, 1912
Hin6I	GCGC	2 cut(s)	222, 1910
HinP1I	GCGC	2 cut(s)	222, 1910
HincII	GTYRAC	3 cut(s)	16, 241, 595
HindII	GTYRAC	3 cut(s)	16, 241, 595
HinfI	GANTC	7 cut(s)	388, 505, 596, 834, 864, 1072, 1642
HpaII	CCGG	5 cut(s)	392, 831, 1766, 1791, 1874
HphI	GGTGA	4 cut(s)	151, 418, 1174, 1441
Hpy166II	GTNNAC	8 cut(s)	16, 241, 595, 876, 961, 1904, 2026, 2074
Hpy188I	TCNGA	9 cut(s)	156, 195, 408, 581, 954, 1008, 1083, 1108, 1847
Hpy188III	TCNNGA	4 cut(s)	444, 831, 1567, 2213
Hpy8I	GTNNAC	8 cut(s)	16, 241, 595, 876, 961, 1904, 2026, 2074
HpyAV	CCTTC	7 cut(s)	180, 535, 1153, 1162, 1373, 1573, 2155
HpyCH4III	ACNGT	3 cut(s)	151, 880, 1684
HpyCH4IV	ACGT	3 cut(s)	69, 197, 1335
HpyF10VI	GCNNNNNNNGC	6 cut(s)	230, 977, 1559, 1584, 2132, 2141
HpyF3I	CTNAG	8 cut(s)	45, 289, 892, 1136, 1166, 1844, 1998, 2119
HpySE526I	ACGT	3 cut(s)	69, 197, 1335
HspAI	GCGC	2 cut(s)	222, 1910
KflI	GGGWCCC	1 cut(s)	358
Kpn2I	TCCGGA	1 cut(s)	830
Ksp22I	TGATCA	2 cut(s)	474, 2224
Kzo9I	GATC	5 cut(s)	52, 156, 281, 474, 2224
LmnI	GCTCC	4 cut(s)	446, 1401, 1991, 2042
Lsp1109I	GCAGC	5 cut(s)	316, 735, 955, 2006, 2110
LweI	GCATC	6 cut(s)	520, 527, 540, 1030, 1875, 2122
MaeI	CTAG	3 cut(s)	1251, 1695, 2100
MaeII	ACGT	3 cut(s)	69, 197, 1335
MaeIII	GTNAC	2 cut(s)	1590, 1628
MalI	GATC	5 cut(s)	54, 158, 283, 476, 2226
MbiI	CCGCTC	2 cut(s)	271, 1843
MboI	GATC	5 cut(s)	52, 156, 281, 474, 2224
MhlI	GDGCHC	1 cut(s)	2282
MlsI	TGGCCA	1 cut(s)	2270
MluCI	AATT	9 cut(s)	297, 350, 698, 1191, 1303, 1622, 1686, 1703, 1940
MluNI	TGGCCA	1 cut(s)	2270
MlyI	GAGTC	3 cut(s)	590, 843, 858
MmeI	TCCRAC	1 cut(s)	1423
Mox20I	TGGCCA	1 cut(s)	2270
Mph1103I	ATGCAT	1 cut(s)	997
MroI	TCCGGA	1 cut(s)	830
MroXI	GAANNNNTTC	2 cut(s)	1088, 1886
MscI	TGGCCA	1 cut(s)	2270
MseI	TTAA	6 cut(s)	930, 1272, 1421, 1470, 1500, 1962
MslI	CAYNNNNRTG	5 cut(s)	548, 1100, 1717, 1783, 1973
Msp20I	TGGCCA	1 cut(s)	2270
MspA1I	CMGCKG	1 cut(s)	2123
MspI	CCGG	5 cut(s)	392, 831, 1766, 1791, 1874
MspR9I	CCNGG	8 cut(s)	33, 393, 915, 1069, 1539, 1791, 1874, 2259
Mva1269I	GAATGC	1 cut(s)	1561
MvaI	CCWGG	5 cut(s)	33, 915, 1069, 1539, 2259
MwoI	GCNNNNNNNGC	6 cut(s)	230, 977, 1559, 1584, 2132, 2141
NciI	CCSGG	3 cut(s)	393, 1791, 1874
NcoI	CCATGG	3 cut(s)	838, 1406, 1778
NdeI	CATATG	5 cut(s)	471, 719, 997, 1823, 2038
NdeII	GATC	5 cut(s)	52, 156, 281, 474, 2224
NlaIV	GGNNCC	6 cut(s)	359, 360, 396, 829, 1013, 2279
NmuCI	GTSAC	2 cut(s)	1590, 1628
NsiI	ATGCAT	1 cut(s)	997
NspI	RCATGY	7 cut(s)	419, 610, 1202, 1237, 1591, 1788, 1978
PaqCI	CACCTGC	1 cut(s)	2020
PciI	ACATGT	4 cut(s)	606, 1198, 1233, 1784
PctI	GAATGC	1 cut(s)	1561
PdmI	GAANNNNTTC	2 cut(s)	1088, 1886
PfeI	GAWTC	4 cut(s)	388, 505, 1072, 1642
PflMI	CCANNNNNTGG	2 cut(s)	1716, 2015
PfoI	TCCNGGA	2 cut(s)	31, 1067
PkrI	GCNGC	6 cut(s)	331, 725, 970, 1561, 1996, 2125
PleI	GAGTC	3 cut(s)	590, 842, 858
PpsI	GAGTC	3 cut(s)	590, 842, 858
PpuMI	RGGWCCY	1 cut(s)	358
PscI	ACATGT	4 cut(s)	606, 1198, 1233, 1784
PshBI	ATTAAT	2 cut(s)	1470, 1500
Psp5II	RGGWCCY	1 cut(s)	358
Psp6I	CCWGG	5 cut(s)	31, 913, 1067, 1537, 2257
PspGI	CCWGG	5 cut(s)	31, 913, 1067, 1537, 2257
PspN4I	GGNNCC	6 cut(s)	359, 360, 396, 829, 1013, 2279
PspPI	GGNCC	6 cut(s)	358, 395, 1838, 2018, 2195, 2239
PspPPI	RGGWCCY	1 cut(s)	358
PsrI	GAACNNNNNNTAC	2 cut(s)	2066, 2098
PvuII	CAGCTG	1 cut(s)	2123
RsaI	GTAC	4 cut(s)	560, 688, 1141, 2075
RsaNI	GTAC	4 cut(s)	559, 687, 1140, 2074
RseI	CAYNNNNRTG	5 cut(s)	548, 1100, 1717, 1783, 1973
SaqAI	TTAA	6 cut(s)	930, 1272, 1421, 1470, 1500, 1962
SatI	GCNGC	6 cut(s)	330, 724, 969, 1560, 1995, 2124
Sau3AI	GATC	5 cut(s)	52, 156, 281, 474, 2224
Sau96I	GGNCC	6 cut(s)	358, 395, 1838, 2018, 2195, 2239
SchI	GAGTC	3 cut(s)	590, 843, 858
ScrFI	CCNGG	8 cut(s)	33, 393, 915, 1069, 1539, 1791, 1874, 2259
SduI	GDGCHC	1 cut(s)	2282
SfaNI	GCATC	6 cut(s)	520, 527, 540, 1030, 1875, 2122
SfcI	CTRYAG	1 cut(s)	1120
SinI	GGWCC	2 cut(s)	358, 2018
SmiMI	CAYNNNNRTG	5 cut(s)	548, 1100, 1717, 1783, 1973
SmlI	CTYRAG	1 cut(s)	1266
SmoI	CTYRAG	1 cut(s)	1266
Sse9I	AATT	9 cut(s)	297, 350, 698, 1191, 1303, 1622, 1686, 1703, 1940
SsiI	CCGC	6 cut(s)	259, 269, 453, 1185, 1559, 1841
SspMI	CTAG	3 cut(s)	1251, 1695, 2100
StyD4I	CCNGG	8 cut(s)	31, 391, 913, 1067, 1537, 1789, 1872, 2257
StyI	CCWWGG	3 cut(s)	838, 1406, 1778
TaaI	ACNGT	3 cut(s)	151, 880, 1684
TaiI	ACGT	3 cut(s)	72, 200, 1338
TaqI	TCGA	3 cut(s)	383, 867, 1092
TasI	AATT	9 cut(s)	297, 350, 698, 1191, 1303, 1622, 1686, 1703, 1940
TatI	WGTACW	1 cut(s)	2073
TauI	GCSGC	1 cut(s)	1562
TfiI	GAWTC	4 cut(s)	388, 505, 1072, 1642
Tru1I	TTAA	6 cut(s)	930, 1272, 1421, 1470, 1500, 1962
Tru9I	TTAA	6 cut(s)	930, 1272, 1421, 1470, 1500, 1962
TscAI	CASTG	1 cut(s)	154
TseFI	GTSAC	2 cut(s)	1590, 1628
TseI	GCWGC	5 cut(s)	329, 723, 968, 1994, 2123
Tsp45I	GTSAC	2 cut(s)	1590, 1628
TspDTI	ATGAA	8 cut(s)	86, 126, 401, 672, 706, 1310, 1323, 1652
TspGWI	ACGGA	1 cut(s)	576
TspRI	CASTG	1 cut(s)	154
Van91I	CCANNNNNTGG	2 cut(s)	1716, 2015
VpaK11BI	GGWCC	2 cut(s)	358, 2018
VspI	ATTAAT	2 cut(s)	1470, 1500
XapI	RAATTY	2 cut(s)	297, 1940
XceI	RCATGY	7 cut(s)	419, 610, 1202, 1237, 1591, 1788, 1978
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1953
XmiI	GTMKAC	2 cut(s)	875, 960
XmnI	GAANNNNTTC	2 cut(s)	1088, 1886
XspI	CTAG	3 cut(s)	1251, 1695, 2100
Zsp2I	ATGCAT	1 cut(s)	997

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.