Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000850

Physical Location & Seq

Genomic Coordinates Forward (+)

3093170 .. 3097068

Gene Structure 3899 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1035000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGGGTACTTATGTAGAGGATGGAGTTCCTCATGAAGGAAAGCTGCAATCAAATGTTGATGTAATTGATGATGAAGTGAATGACAGCCCAATAGAGCAAGTGAGGCTAACAGTTCCAATAACGGATGACCCTTCAGAGCCGACCTTGACGTTTCGAACATGGGTTCTTGGGATCATTTCATGCTCAGTTCTTGCCTTTGTCAACCAGTTTTTCGGGTATCGCCAGAATCAGCTCTACGTTTCTTCAGTCTCAGCGCAAATTCTTGTCCTGCCTCTTGGGAAGCTGATGGCTGCTACTCTTCCGAAGAGAAGAATCCGACTTCCGTTTAGAAATTGGTCTTTTTCATTGAATCCGGGGCCTTTCAACTTGAAAGAACATGTGTTGATCACTATATTTGCCAACTCAGGATCGAACAGTGTTTACGCTGTTAACATTATCACGATTGTCATGGCTTTCTACCACAGACCAATGCATCCTGCAGCTGCCTTCTTGTTAGCACAAACCACTCAGATGCTTGGGTATGGATGGGCTGGCCTTTTCAGAAAATACCTTGTTGACTCTCCTTACATGTGGTGGCCTTCAAATCTTGTTCAAGTCTCTCTTTTCAGGGCACTGCACGAAAAGGAAAAGAGACCGAAGGGAGGCCGAACCAGGCTGCAGTTCTTCTTCATGGTTTTCATCTGCAGCTTTGCTTACTACATTGTTCCGAGTTTTCTTTTCCCCTCCATTTCCGCCTTCTCCTTCGTTTGCTGGATATACAAGGACTCCATCACCGCGCAACAGATTGGTTCCGGCATGCATGGCCTTGGCATTGGCTCATTTGGCCTTGATTGGTCCACCGTTGCCGGTTTCTTAGGCAGCCCTTTGGCCACGCCTGGATTCGCAACCATTAACATCTTAATCGGTTTTGTCTTGATTGTCTACATTGTTACCCCCATTGCTTATTGGAACAATGCCTATGATGCTCAAAAGTTTCCGATCATTACGTCTCACACCTTCGACTCCACCGGCCAAAGCTATAACATTTCCAGAGTACTGGATCAGAAAAATTTCGACATTAACATGGTAGGGTACAACGGTTACAGTAAACTCTATCTCAGTACCTTCTTTGCCTTCTCTTATGGACTGAGCTTTGCCACCTTGACGGCTACTATTTCGCACGTTGCTCTCTTCCACGGAAGAACAATCTGGAAGATGTGGAAAAAGACAACTAGTGCAGTGAAAGATCAGATCGGTGACATCCACACCCGACTGATGAAGAAGAACTACGATGCAGTGCCTCAATGGTGGTTTCAAATCATCCTTGTTTCAATGGTTGCTCTTGCTATCTTTACTTGCGAAGGTTTCGGAAAGCAGCTCCAACTTCCATGGTGGGGAGTTTTAATGGCTTGCGGCATTGCCCTATTTTTCACCTTACCTATCGGCATTATTCAAGCCACAACGAACCAGCAACCAGGGCTTAATGTGATCACGGAGCTACTCATTGGGTACATTTATCCGGGGAAGCCTGTTGCTAATGTGGCTTTCAAGACCTATGGATATATCAGTATGTCACAGGCACTCAATTTTCTTGGTGACTTCAAATTAGGCCACTATATGAAGATCCCTCCTAAGTCCATGTTTGTTGTGCAGTTAGTTGGAACGCTAGTAGCTTCAAGTGTCTACTTTGGCACATCCTGGTGGCTTATCACAAGCATCGAGTACATCTGTGATCCAGCGAAGCTGCCAACGGGAAGTCCGTGGACATGCCCGGGAGATGATGTGTTCTACAATGCTTCAATCATATGGGGGGTCATAGGCCCCCTCAGGATGTTCGCAGGCAAAGGTGTCTACCCGGAAATGAACTGGTTCTTCCTCATTGGTTTGCTTGCACCTGTTCCGATTTGGTTCCTCTCCAAAAAATTCCCCAACCAGAAGTGGATTAAGCTCATAAACATGCCGATAATTCTAGGGGCGACAGGCTCCATGCCGCCTGCTAGGGCTGTGAACTACTTGACATGGCTTTCAGTTGGGATTTTCTTCAACTTTTATGTGTACAGAAAGTACAAGGGGTGGTGGGCTAGGCATAACTACATTCTATCTGCTGCTTTGGATGCTGGTGTGGCCTTCACCGCAGTTCTTCTGTATTTCACCCTTCAATCCAAGAATATTATGGGGCCCGGCTGGTGGGGTCTCGAAGCGGATGACCATTGTCCGTTGGCTGAGTGCCCCACGGCGCCAGGTGTAGTTGCCAAAGGCTGTCCGGTTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

751

Amino Acids

84.09

Weight (kDa)

9.18

Isoelectric Point (pI)

38.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	49 - 711	1.2e-170	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000850)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26590 AT5G55930
fragaria_vesca	FvH4_3g42570 FvH4_3g42651 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660
malus_domestica	MD03G1029800.v1.1 MD03G1029900.v1.1 MD03G1030000.v1.1 MD07G1217200.v1.1 MD11G1034800.v1.1 MD11G1035000.v1.1 MD11G1035100.v1.1
prunus_persica	Prupe.6G026000_v2.0.a1 Prupe.6G026100_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026300_v2.0.a1
pyrus_communis	pycom03g02480 pycom03g02500 pycom11g02890 pycom11g02900
rosa_chinensis	RchiOBHm_Chr5g0076291 RchiOBHm_Chr5g0076301 RchiOBHm_Chr5g0076311 RchiOBHm_Chr5g0076621 RchiOBHm_Chr5g0076671
rosa_laevigata	RLG00000036614 RLG00000036615 RLG00000036616 RLG00000036617
rosa_multiflora	Rmu_co8320621.1_g000001 Rmu_co8419599.1_g000001 Rmu_co8455339.1_g000001 Rmu_sc0005961.1_g000002 Rmu_sc0005961.1_g000003 Rmu_sc0013948.1_g000002 Rmu_sc0035770.1_g000001 Rmu_sc0040547.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005490 Rroxscaffold_1G00005550 Rroxscaffold_1G00005560 Rroxscaffold_1G00005570
rosa_rugosa	Rorug05G0446700.1 Rorug05G0447000 Rorug05G0447100 Rorug05G0447200 Rorug05G0447200 Rorug05G0447300
rosa_samantha	Rh5AG501900 Rh5AG502000 Rh5AG502100 Rh5BG523700 Rh5BG523800 Rh5BG523900 Rh5CG547400 Rh5CG547500 Rh5CG547600 Rh5DG535900 Rh5DG536000 Rh5DG536100 Rh7AG436800
rosa_wichuraiana	Rw0G015040 Rw0G015060 Rw5G046590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	2215
AccI	GTMKAC	3 cut(s)	921, 1662, 1830
AccII	CGCG	1 cut(s)	776
AciI	CCGC	6 cut(s)	732, 774, 1392, 1970, 2112, 2180
AclWI	GGATC	5 cut(s)	179, 415, 1047, 1597, 1706
AcoI	YGGCCR	2 cut(s)	867, 1009
AcsI	RAATTY	3 cut(s)	258, 1048, 1901
AcuI	CTGAAG	2 cut(s)	117, 228
AcyI	GRCGYC	1 cut(s)	2216
AfaI	GTAC	8 cut(s)	7, 1035, 1073, 1102, 1490, 1703, 2036, 2045
AfiI	CCNNNNNNNGG	4 cut(s)	35, 641, 1373, 2166
AflIII	ACRYGT	2 cut(s)	376, 567
AhlI	ACTAGT	1 cut(s)	1211
AjnI	CCWGG	5 cut(s)	650, 874, 1453, 1676, 2218
Alw26I	GTCTC	5 cut(s)	253, 601, 625, 993, 2177
AlwI	GGATC	5 cut(s)	179, 415, 1047, 1597, 1706
Ama87I	CYCGRG	1 cut(s)	1750
ApaI	GGGCCC	1 cut(s)	2160
ApoI	RAATTY	3 cut(s)	258, 1048, 1901
Asp700I	GAANNNNTTC	2 cut(s)	1049, 1847
AspLEI	GCGC	3 cut(s)	256, 778, 2218
AspS9I	GGNCC	5 cut(s)	356, 834, 1799, 2156, 2157
AsuC2I	CCSGG	6 cut(s)	354, 1500, 1751, 1752, 1835, 2160
AsuHPI	GGTGA	6 cut(s)	763, 1247, 1402, 1586, 2101, 2122
AsuII	TTCGAA	1 cut(s)	154
AvaI	CYCGRG	1 cut(s)	1750
AvaII	GGWCC	1 cut(s)	834
AxyI	CCTNAGG	1 cut(s)	1805
BaeGI	GKGCMC	3 cut(s)	613, 2160, 2210
BaeI	ACNNNNGTAYC	3 cut(s)	30, 1063, 1096
BalI	TGGCCA	1 cut(s)	869
BanI	GGYRCC	1 cut(s)	2215
BanII	GRGCYC	1 cut(s)	2160
BarI	GAAGNNNNNNTAC	2 cut(s)	1250, 1282
BccI	CCATC	4 cut(s)	14, 280, 519, 776
BceAI	ACGGC	2 cut(s)	1161, 2229
BciT130I	CCWGG	5 cut(s)	652, 876, 1455, 1678, 2220
BclI	TGATCA	2 cut(s)	384, 1467
BcnI	CCSGG	6 cut(s)	354, 1500, 1751, 1752, 1835, 2160
BcoDI	GTCTC	5 cut(s)	253, 601, 625, 993, 2177
BcuI	ACTAGT	1 cut(s)	1211
BfaI	CTAG	5 cut(s)	1212, 1646, 1949, 1977, 2061
BfmI	CTRYAG	3 cut(s)	477, 656, 682
BfoI	RGCGCY	1 cut(s)	2219
BmcAI	AGTACT	1 cut(s)	1035
Bme18I	GGWCC	1 cut(s)	834
BmeT110I	CYCGRG	1 cut(s)	1750
BmgT120I	GGNCC	5 cut(s)	356, 834, 1799, 2156, 2157
BmiI	GGNNCC	8 cut(s)	357, 790, 1801, 1889, 1963, 2157, 2158, 2217
BmsI	GCATC	6 cut(s)	481, 501, 952, 1261, 1704, 2083
BoxI	GACNNNNGTC	1 cut(s)	2190
Bpu14I	TTCGAA	1 cut(s)	154
BpuMI	CCSGG	6 cut(s)	354, 1500, 1751, 1752, 1835, 2160
BsaHI	GRCGYC	1 cut(s)	2216
BsaI	GGTCTC	2 cut(s)	625, 2177
BsaJI	CCNNGG	9 cut(s)	353, 805, 1174, 1367, 1454, 1499, 1739, 1750, 2211
BsaWI	WCCGGW	1 cut(s)	2242
BsaXI	ACNNNNNCTCC	4 cut(s)	749, 779, 1746, 1776
Bsc4I	CCNNNNNNNGG	4 cut(s)	35, 641, 1373, 2166
Bse118I	RCCGGY	2 cut(s)	845, 1007
Bse1I	ACTGG	3 cut(s)	205, 1041, 1850
Bse21I	CCTNAGG	1 cut(s)	1805
Bse3DI	GCAATG	2 cut(s)	936, 1395
BseBI	CCWGG	5 cut(s)	652, 876, 1455, 1678, 2220
BseDI	CCNNGG	9 cut(s)	353, 805, 1174, 1367, 1454, 1499, 1739, 1750, 2211
BseLI	CCNNNNNNNGG	4 cut(s)	35, 641, 1373, 2166
BseMI	GCAATG	2 cut(s)	936, 1395
BseMII	CTCAG	8 cut(s)	198, 264, 417, 521, 1111, 1118, 1819, 2193
BseNI	ACTGG	3 cut(s)	205, 1041, 1850
BseSI	GKGCMC	3 cut(s)	613, 2160, 2210
BsgI	GTGCAG	3 cut(s)	599, 1236, 1649
Bsh1236I	CGCG	1 cut(s)	776
BshNI	GGYRCC	1 cut(s)	2215
BsiHKCI	CYCGRG	1 cut(s)	1750
BsiSI	CCGG	9 cut(s)	353, 792, 846, 1008, 1499, 1751, 1835, 2160, 2243
BslI	CCNNNNNNNGG	4 cut(s)	35, 641, 1373, 2166
BsmAI	GTCTC	5 cut(s)	253, 601, 625, 993, 2177
BsmBI	CGTCTC	1 cut(s)	993
Bso31I	GGTCTC	2 cut(s)	625, 2177
BsoBI	CYCGRG	1 cut(s)	1750
Bsp119I	TTCGAA	1 cut(s)	154
Bsp120I	GGGCCC	1 cut(s)	2156
Bsp1286I	GDGCHC	3 cut(s)	613, 2160, 2210
Bsp1407I	TGTACA	1 cut(s)	2034
Bsp19I	CCATGG	1 cut(s)	1367
BspACI	CCGC	6 cut(s)	732, 774, 1392, 1970, 2112, 2180
BspCNI	CTCAG	8 cut(s)	197, 263, 416, 520, 1110, 1119, 1818, 2194
BspFNI	CGCG	1 cut(s)	776
BspHI	TCATGA	1 cut(s)	31
BspLI	GGNNCC	8 cut(s)	357, 790, 1801, 1889, 1963, 2157, 2158, 2217
BspMAI	CTGCAG	3 cut(s)	481, 660, 686
BspPI	GGATC	5 cut(s)	179, 415, 1047, 1597, 1706
BspT104I	TTCGAA	1 cut(s)	154
BspT107I	GGYRCC	1 cut(s)	2215
BspTNI	GGTCTC	2 cut(s)	625, 2177
BsrDI	GCAATG	2 cut(s)	936, 1395
BsrFI	RCCGGY	2 cut(s)	845, 1007
BsrGI	TGTACA	1 cut(s)	2034
BsrI	ACTGG	3 cut(s)	205, 1041, 1850
BssAI	RCCGGY	2 cut(s)	845, 1007
BssECI	CCNNGG	9 cut(s)	353, 805, 1174, 1367, 1454, 1499, 1739, 1750, 2211
BssNI	GRCGYC	1 cut(s)	2216
BssT1I	CCWWGG	2 cut(s)	805, 1367
Bst2UI	CCWGG	5 cut(s)	652, 876, 1455, 1678, 2220
Bst4CI	ACNGT	5 cut(s)	112, 416, 841, 1079, 1085
Bst6I	CTCTTC	3 cut(s)	299, 303, 1175
BstACI	GRCGYC	1 cut(s)	2216
BstAUI	TGTACA	1 cut(s)	2034
BstBI	TTCGAA	1 cut(s)	154
BstC8I	GCNNGC	6 cut(s)	532, 797, 1390, 1819, 1869, 1974
BstDSI	CCRYGG	4 cut(s)	1174, 1367, 1739, 2211
BstENI	CCTNNNNNAGG	1 cut(s)	33
BstFNI	CGCG	1 cut(s)	776
BstH2I	RGCGCY	1 cut(s)	2219
BstHHI	GCGC	3 cut(s)	256, 778, 2218
BstMAI	GTCTC	5 cut(s)	253, 601, 625, 993, 2177
BstMWI	GCNNNNNNNGC	9 cut(s)	103, 801, 822, 962, 1456, 1520, 2093, 2102, 2111
BstNI	CCWGG	5 cut(s)	652, 876, 1455, 1678, 2220
BstNSI	RCATGY	5 cut(s)	380, 571, 799, 1749, 1939
BstPAI	GACNNNNGTC	1 cut(s)	2190
BstSFI	CTRYAG	3 cut(s)	477, 656, 682
BstSLI	GKGCMC	3 cut(s)	613, 2160, 2210
BstUI	CGCG	1 cut(s)	776
BstX2I	RGATCY	1 cut(s)	1602
BstXI	CCANNNNNNTGG	1 cut(s)	1036
BstYI	RGATCY	1 cut(s)	1602
Bsu36I	CCTNAGG	1 cut(s)	1805
BtgI	CCRYGG	4 cut(s)	1174, 1367, 1739, 2211
BtsI	GCAGTG	3 cut(s)	611, 1224, 1281
BtsIMutI	CAGTG	4 cut(s)	421, 611, 1224, 1281
Cac8I	GCNNGC	6 cut(s)	532, 797, 1390, 1819, 1869, 1974
CciI	TCATGA	1 cut(s)	31
CfoI	GCGC	3 cut(s)	256, 778, 2218
Cfr10I	RCCGGY	2 cut(s)	845, 1007
Cfr13I	GGNCC	5 cut(s)	356, 834, 1799, 2156, 2157
Cfr9I	CCCGGG	1 cut(s)	1750
Csp6I	GTAC	8 cut(s)	6, 1034, 1072, 1101, 1489, 1702, 2035, 2044
CviQI	GTAC	8 cut(s)	6, 1034, 1072, 1101, 1489, 1702, 2035, 2044
DinI	GGCGCC	1 cut(s)	2217
EaeI	YGGCCR	2 cut(s)	867, 1009
Eam1104I	CTCTTC	3 cut(s)	299, 303, 1175
EarI	CTCTTC	3 cut(s)	299, 303, 1175
EciI	GGCGGA	1 cut(s)	721
Eco130I	CCWWGG	2 cut(s)	805, 1367
Eco24I	GRGCYC	1 cut(s)	2160
Eco31I	GGTCTC	2 cut(s)	625, 2177
Eco47I	GGWCC	1 cut(s)	834
Eco57I	CTGAAG	2 cut(s)	117, 228
Eco81I	CCTNAGG	1 cut(s)	1805
Eco88I	CYCGRG	1 cut(s)	1750
EcoNI	CCTNNNNNAGG	1 cut(s)	33
EcoO109I	RGGNCCY	3 cut(s)	356, 1799, 2156
EcoRII	CCWGG	5 cut(s)	650, 874, 1453, 1676, 2218
EcoT14I	CCWWGG	2 cut(s)	805, 1367
EcoT22I	ATGCAT	2 cut(s)	474, 801
EcoT38I	GRGCYC	1 cut(s)	2160
EgeI	GGCGCC	1 cut(s)	2217
EheI	GGCGCC	1 cut(s)	2217
ErhI	CCWWGG	2 cut(s)	805, 1367
Esp3I	CGTCTC	1 cut(s)	993
FalI	AAGNNNNNCTT	2 cut(s)	585, 617
FauNDI	CATATG	1 cut(s)	1784
FbaI	TGATCA	2 cut(s)	384, 1467
FblI	GTMKAC	3 cut(s)	921, 1662, 1830
FriOI	GRGCYC	1 cut(s)	2160
FspBI	CTAG	5 cut(s)	1212, 1646, 1949, 1977, 2061
GlaI	GCGC	3 cut(s)	255, 777, 2217
HaeII	RGCGCY	1 cut(s)	2219
HapII	CCGG	9 cut(s)	353, 792, 846, 1008, 1499, 1751, 1835, 2160, 2243
HhaI	GCGC	3 cut(s)	256, 778, 2218
Hin1I	GRCGYC	1 cut(s)	2216
Hin6I	GCGC	3 cut(s)	254, 776, 2216
HinP1I	GCGC	3 cut(s)	254, 776, 2216
HincII	GTYRAC	3 cut(s)	202, 430, 556
HindII	GTYRAC	3 cut(s)	202, 430, 556
HinfI	GANTC	7 cut(s)	226, 312, 349, 557, 764, 879, 1001
HpaI	GTTAAC	1 cut(s)	430
HpaII	CCGG	9 cut(s)	353, 792, 846, 1008, 1499, 1751, 1835, 2160, 2243
HphI	GGTGA	6 cut(s)	763, 1247, 1402, 1586, 2101, 2122
Hpy188III	TCNNGA	9 cut(s)	32, 405, 439, 913, 1029, 1189, 1528, 1807, 2174
HpyCH4III	ACNGT	5 cut(s)	112, 416, 841, 1079, 1085
HpyCH4IV	ACGT	4 cut(s)	149, 237, 986, 1161
HpyF10VI	GCNNNNNNNGC	9 cut(s)	103, 801, 822, 962, 1456, 1520, 2093, 2102, 2111
HpySE526I	ACGT	4 cut(s)	149, 237, 986, 1161
Hsp92I	GRCGYC	1 cut(s)	2216
HspAI	GCGC	3 cut(s)	254, 776, 2216
KasI	GGCGCC	1 cut(s)	2215
Ksp22I	TGATCA	2 cut(s)	384, 1467
KspAI	GTTAAC	1 cut(s)	430
LmnI	GCTCC	3 cut(s)	1362, 1474, 1967
LweI	GCATC	6 cut(s)	481, 501, 952, 1261, 1704, 2083
MaeI	CTAG	5 cut(s)	1212, 1646, 1949, 1977, 2061
MaeII	ACGT	4 cut(s)	149, 237, 986, 1161
MaeIII	GTNAC	5 cut(s)	928, 1079, 1235, 1551, 1574
MflI	RGATCY	1 cut(s)	1602
MhlI	GDGCHC	3 cut(s)	613, 2160, 2210
MlsI	TGGCCA	1 cut(s)	869
MluCI	AATT	8 cut(s)	63, 258, 331, 1048, 1564, 1583, 1901, 1944
MluNI	TGGCCA	1 cut(s)	869
Mly113I	GGCGCC	1 cut(s)	2216
MlyI	GAGTC	3 cut(s)	551, 758, 995
MmeI	TCCRAC	3 cut(s)	340, 1384, 1618
Mox20I	TGGCCA	1 cut(s)	869
Mph1103I	ATGCAT	2 cut(s)	474, 801
MroXI	GAANNNNTTC	2 cut(s)	1049, 1847
MscI	TGGCCA	1 cut(s)	869
MseI	TTAA	7 cut(s)	429, 891, 899, 1059, 1382, 1461, 1923
MslI	CAYNNNNRTG	4 cut(s)	509, 1061, 1678, 1934
Msp20I	TGGCCA	1 cut(s)	869
MspA1I	CMGCKG	1 cut(s)	482
MspI	CCGG	9 cut(s)	353, 792, 846, 1008, 1499, 1751, 1835, 2160, 2243
MvaI	CCWGG	5 cut(s)	652, 876, 1455, 1678, 2220
MvnI	CGCG	1 cut(s)	776
MwoI	GCNNNNNNNGC	9 cut(s)	103, 801, 822, 962, 1456, 1520, 2093, 2102, 2111
NarI	GGCGCC	1 cut(s)	2216
NciI	CCSGG	6 cut(s)	354, 1500, 1751, 1752, 1835, 2160
NcoI	CCATGG	1 cut(s)	1367
NdeI	CATATG	1 cut(s)	1784
NlaIV	GGNNCC	8 cut(s)	357, 790, 1801, 1889, 1963, 2157, 2158, 2217
NmuCI	GTSAC	3 cut(s)	1235, 1551, 1574
NsiI	ATGCAT	2 cut(s)	474, 801
NspI	RCATGY	5 cut(s)	380, 571, 799, 1749, 1939
NspV	TTCGAA	1 cut(s)	154
PaeI	GCATGC	1 cut(s)	799
PagI	TCATGA	1 cut(s)	31
PciI	ACATGT	2 cut(s)	376, 567
PcsI	WCGNNNNNNNCGW	1 cut(s)	1736
PdmI	GAANNNNTTC	2 cut(s)	1049, 1847
PfeI	GAWTC	4 cut(s)	226, 312, 349, 879
PleI	GAGTC	3 cut(s)	551, 758, 995
PluTI	GGCGCC	1 cut(s)	2219
PpsI	GAGTC	3 cut(s)	551, 758, 995
PscI	ACATGT	2 cut(s)	376, 567
PshAI	GACNNNNGTC	1 cut(s)	2190
Psp6I	CCWGG	5 cut(s)	650, 874, 1453, 1676, 2218
PspGI	CCWGG	5 cut(s)	650, 874, 1453, 1676, 2218
PspN4I	GGNNCC	8 cut(s)	357, 790, 1801, 1889, 1963, 2157, 2158, 2217
PspOMI	GGGCCC	1 cut(s)	2156
PspPI	GGNCC	5 cut(s)	356, 834, 1799, 2156, 2157
PsrI	GAACNNNNNNTAC	2 cut(s)	404, 436
PstI	CTGCAG	3 cut(s)	481, 660, 686
PsuI	RGATCY	1 cut(s)	1602
PvuII	CAGCTG	1 cut(s)	482
RsaI	GTAC	8 cut(s)	7, 1035, 1073, 1102, 1490, 1703, 2036, 2045
RsaNI	GTAC	8 cut(s)	6, 1034, 1072, 1101, 1489, 1702, 2035, 2044
RseI	CAYNNNNRTG	4 cut(s)	509, 1061, 1678, 1934
SaqAI	TTAA	7 cut(s)	429, 891, 899, 1059, 1382, 1461, 1923
Sau96I	GGNCC	5 cut(s)	356, 834, 1799, 2156, 2157
ScaI	AGTACT	1 cut(s)	1035
SchI	GAGTC	3 cut(s)	551, 758, 995
SduI	GDGCHC	3 cut(s)	613, 2160, 2210
SfaNI	GCATC	6 cut(s)	481, 501, 952, 1261, 1704, 2083
SfcI	CTRYAG	3 cut(s)	477, 656, 682
SfoI	GGCGCC	1 cut(s)	2217
SfuI	TTCGAA	1 cut(s)	154
SinI	GGWCC	1 cut(s)	834
SmaI	CCCGGG	1 cut(s)	1752
SmiMI	CAYNNNNRTG	4 cut(s)	509, 1061, 1678, 1934
SpeI	ACTAGT	1 cut(s)	1211
SphI	GCATGC	1 cut(s)	799
Sse9I	AATT	8 cut(s)	63, 258, 331, 1048, 1564, 1583, 1901, 1944
SsiI	CCGC	6 cut(s)	732, 774, 1392, 1970, 2112, 2180
SspDI	GGCGCC	1 cut(s)	2215
SspI	AATATT	1 cut(s)	2149
SspMI	CTAG	5 cut(s)	1212, 1646, 1949, 1977, 2061
StyI	CCWWGG	2 cut(s)	805, 1367
TaaI	ACNGT	5 cut(s)	112, 416, 841, 1079, 1085
TaiI	ACGT	4 cut(s)	152, 240, 989, 1164
TaqI	TCGA	6 cut(s)	154, 410, 999, 1053, 1698, 2175
TaqII	GACCGA	1 cut(s)	649
TasI	AATT	8 cut(s)	63, 258, 331, 1048, 1564, 1583, 1901, 1944
TatI	WGTACW	4 cut(s)	1033, 1701, 2034, 2043
TauI	GCSGC	2 cut(s)	1395, 1972
TfiI	GAWTC	4 cut(s)	226, 312, 349, 879
Tru1I	TTAA	7 cut(s)	429, 891, 899, 1059, 1382, 1461, 1923
Tru9I	TTAA	7 cut(s)	429, 891, 899, 1059, 1382, 1461, 1923
TscAI	CASTG	4 cut(s)	421, 618, 1224, 1281
TseFI	GTSAC	3 cut(s)	1235, 1551, 1574
Tsp45I	GTSAC	3 cut(s)	1235, 1551, 1574
TspDTI	ATGAA	9 cut(s)	48, 87, 168, 333, 658, 667, 1271, 1613, 1856
TspGWI	ACGGA	6 cut(s)	137, 312, 1191, 1487, 1728, 2184
TspMI	CCCGGG	1 cut(s)	1750
TspRI	CASTG	4 cut(s)	421, 618, 1224, 1281
VpaK11BI	GGWCC	1 cut(s)	834
XagI	CCTNNNNNAGG	1 cut(s)	33
XapI	RAATTY	3 cut(s)	258, 1048, 1901
XceI	RCATGY	5 cut(s)	380, 571, 799, 1749, 1939
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2149
XmaI	CCCGGG	1 cut(s)	1750
XmiI	GTMKAC	3 cut(s)	921, 1662, 1830
XmnI	GAANNNNTTC	2 cut(s)	1049, 1847
XspI	CTAG	5 cut(s)	1212, 1646, 1949, 1977, 2061
ZrmI	AGTACT	1 cut(s)	1035
Zsp2I	ATGCAT	2 cut(s)	474, 801

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.