Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0000850

Physical Location & Seq

Genomic Coordinates Forward (+)

1862627 .. 1865679

Gene Structure 3053 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g02480.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGGTTCTGGGGATTTTATCGTGTGCAATTCTTGCTTTCGTCAACAAATTCTTTGGGTTCCGAACAAATCAGCTCTCTGTTTCTTCAGTCTCGGCGCAGATTGTTGTCCTTCCTCTAGGAAAGTTGATGGCTGCGACCCTTCCAACCAGAAAATTCCGAGTTCCCTTCACAAAATGGTCGTTTACAATGAATCCGGGGCCGTTCAATCTGAAAGAACATGCGTGTTGATCACCATATTTGCTAACTCGGGAGCAGGCGGCGTTTATGCAGTTCACATCATCACGATTGTCAAGGCCTTCTACCACAGACCGCAGAATCCTGCAGCAGCCTTCCTGTTAGCACAAACCACTCAGATGCTTGGGTATGGATGGGCTGGCTTATTCAGAAAATACCTTGTTGACTCCCCTTACATGTGGTGGCCCTCAAATCTAGTTCAAGTTTCTCTCTTCAGGGCATTGCATGAGAAGGAAAAGAGACCAAGGGGAGGCCTGACTAGGCTGCAGTTCTTCCTTACTGTTTTCGCATGCAGCTTTGCTTACTACATTATTCCCGGATTTCTTTTCCCCTCCATCTCTGCTTTCTCCATTGTTTGCTTGATATGGAAGAGCTCCATCACCGCCCAACAGATCGGTTCCGGCATGGGTGGCCTTGGCATTGGCTCTTTCGGCTTCGATTGGTCCACAATTGCCGGCTTCTTGGGCAGCCCTTTAGCCACACCTGGATTTGCCATCATCAATATGTTAGTTGGTTTCATCTTGATCCTCTACGTTCTTACCCCCATTTCTTATTGGTCCAATGCGTATGATGCTAAGAAGTTTCCAATCTTCACCTCTCACACTTTCGACTCCACGGGCAAGACCTTTAATATTTCACGGGTTCTGAACGAAACAACTTTCGACATTGACCTCGAAGCGTATAACAATTACAGTAAACTCTATCTCAGTACCTTCTTTGCCTTTACTTATGGTTTGAGCTTTGCCACTCTTACAGCTACTATTTCACATGTTGGCCTCTTCCATGGAAAGTCAATTTGGCACATGTGGAAGAAGACAGCTAGTGTCGTGAAAGATCAAGTCGGCGACATCCATACCCGTCTGATGAAAAAGAACTATGATTCTGTCCCTCAATGGTGGTTTCAACTCATCCTTGTTTTAATGGTTGGCCTTTCCATCTTTGCTTGTGAAGGTTTTGGAAAACAGCTCCAACTTCCATGGTGGGGAGTTTTAATGGCTTGTGGCATTGCCCTATTTTTCACCTTGCCCATCGGCATTATTCAAGCCACAACAAACCAGCAACCTGGGCTTAATGTGATCACGGAGCTAGTTATTGGGTATATTTACCCAGGGAAGCCCCTTGCTAATGTGGCCTTTAAAACCTATGGATACATCAGCATGGCACAAGCACTCACTTTTCTTGGTGACTTCAAATTAGGTCACTACATGAAGATCCCTCCTAAGTCAATGTTTATTGCACAGCTAGTTGGAACAGTAGTGGCTTCAGGTGTATATTTTGGCACAGCATGGTGGCTTCTCGAATCCATTGAGCACATATGCGATACATCAAATTTGCCAGAGGGAAGTCCGTGGACATGCCCGGGAGACGATGTGTTCTACAATGCTTCGATCATATTGCGGGTCATAGGCCCCCTCCGAATGTTCACCAGTTACGGAGTCTACAAGGAGATGAACTGGTTCTTCCTCATCGGCCTCCTTGCACCTGTTCCGGTTTGGTTCCTCTCCAAGAAATTCCCCAACCAAAAGTGGATCAGGCTTATCAACATGCCCATAATCCTCGGAGCAACGGGCAACATGCCGCCGGCTAAAGCAGTGCACTTCATAACATGGTTTACGGTTGGTATTTTCTTCAGCTTTTATGTGTACAAAAGGCACAAGGGCTGGTGGGCTAGGCATAACTATATCCTCTCTGCTGCTTTGGATGCTGGCCTTGCCTTCATGGGAGTTCTCATGTATTTCTCCCTCCAATCCAAGGGGATCAACGGGCCTCAATGGTGGGGTCTGGAAGGCAGTGACCACTGCCCGTTGGCCCAGTGTCCGACGGCTCCCGGGGTAGCTGCCAAAGGCTGCCCAGTCCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

699

Amino Acids

77.72

Weight (kDa)

9.14

Isoelectric Point (pI)

39.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000850)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26590 AT5G55930
fragaria_vesca	FvH4_3g42570 FvH4_3g42651 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660
malus_domestica	MD03G1029800.v1.1 MD03G1029900.v1.1 MD03G1030000.v1.1 MD07G1217200.v1.1 MD11G1034800.v1.1 MD11G1035000.v1.1 MD11G1035100.v1.1
prunus_persica	Prupe.6G026000_v2.0.a1 Prupe.6G026100_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026300_v2.0.a1
pyrus_communis	pycom03g02480 pycom03g02500 pycom11g02890 pycom11g02900
rosa_chinensis	RchiOBHm_Chr5g0076291 RchiOBHm_Chr5g0076301 RchiOBHm_Chr5g0076311 RchiOBHm_Chr5g0076621 RchiOBHm_Chr5g0076671
rosa_laevigata	RLG00000036614 RLG00000036615 RLG00000036616 RLG00000036617
rosa_multiflora	Rmu_co8320621.1_g000001 Rmu_co8419599.1_g000001 Rmu_co8455339.1_g000001 Rmu_sc0005961.1_g000002 Rmu_sc0005961.1_g000003 Rmu_sc0013948.1_g000002 Rmu_sc0035770.1_g000001 Rmu_sc0040547.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005490 Rroxscaffold_1G00005550 Rroxscaffold_1G00005560 Rroxscaffold_1G00005570
rosa_rugosa	Rorug05G0446700.1 Rorug05G0447000 Rorug05G0447100 Rorug05G0447200 Rorug05G0447200 Rorug05G0447300
rosa_samantha	Rh5AG501900 Rh5AG502000 Rh5AG502100 Rh5BG523700 Rh5BG523800 Rh5BG523900 Rh5CG547400 Rh5CG547500 Rh5CG547600 Rh5DG535900 Rh5DG536000 Rh5DG536100 Rh7AG436800
rosa_wichuraiana	Rw0G015040 Rw0G015060 Rw5G046590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1674
AciI	CCGC	5 cut(s)	258, 311, 618, 1633, 1814
AclWI	GGATC	4 cut(s)	754, 1441, 1772, 2000
AcsI	RAATTY	4 cut(s)	48, 153, 1564, 1745
AcuI	CTGAAG	4 cut(s)	70, 433, 1482, 1849
AfaI	GTAC	2 cut(s)	946, 1880
AfiI	CCNNNNNNNGG	3 cut(s)	485, 1217, 1987
AflIII	ACRYGT	3 cut(s)	411, 1003, 1038
AgsI	TTSAA	5 cut(s)	206, 437, 1139, 1277, 1426
AjnI	CCWGG	3 cut(s)	718, 1297, 1342
AjuI	GAANNNNNNNTTGG	2 cut(s)	1015, 1047
Alw21I	GWGCWC	3 cut(s)	611, 1548, 1833
Alw26I	GTCTC	3 cut(s)	95, 469, 1593
Alw44I	GTGCAC	1 cut(s)	1829
AlwI	GGATC	4 cut(s)	754, 1441, 1772, 2000
Ama87I	CYCGRG	3 cut(s)	247, 1594, 2063
ApaLI	GTGCAC	1 cut(s)	1829
ApeKI	GCWGC	9 cut(s)	132, 323, 326, 499, 528, 702, 1928, 2072, 2082
ApoI	RAATTY	4 cut(s)	48, 153, 1564, 1745
Asp700I	GAANNNNTTC	1 cut(s)	1691
AspLEI	GCGC	1 cut(s)	98
AspS9I	GGNCC	7 cut(s)	198, 420, 678, 792, 1643, 2000, 2044
AsuC2I	CCSGG	6 cut(s)	196, 552, 1595, 1596, 2064, 2065
AsuHPI	GGTGA	6 cut(s)	223, 607, 820, 1246, 1430, 1651
AvaI	CYCGRG	3 cut(s)	247, 1594, 2063
AvaII	GGWCC	2 cut(s)	678, 792
BaeGI	GKGCMC	1 cut(s)	1833
BanII	GRGCYC	1 cut(s)	611
BbsI	GAAGAC	1 cut(s)	1055
Bbv12I	GWGCWC	3 cut(s)	611, 1548, 1833
BbvI	GCAGC	9 cut(s)	119, 335, 338, 486, 540, 714, 1915, 2059, 2069
BccI	CCATC	7 cut(s)	122, 363, 578, 620, 737, 1178, 1271
BceAI	ACGGC	2 cut(s)	185, 2073
BcgI	CGANNNNNNTGC	2 cut(s)	1612, 1646
BciT130I	CCWGG	3 cut(s)	720, 1299, 1344
BciVI	GTATCC	1 cut(s)	1376
BclI	TGATCA	2 cut(s)	228, 1311
BcnI	CCSGG	6 cut(s)	196, 552, 1595, 1596, 2064, 2065
BcoDI	GTCTC	3 cut(s)	95, 469, 1593
BfaI	CTAG	7 cut(s)	117, 431, 495, 1056, 1322, 1478, 1905
BfmI	CTRYAG	2 cut(s)	321, 500
BfuI	GTATCC	1 cut(s)	1376
Bme1390I	CCNGG	9 cut(s)	196, 552, 720, 1299, 1344, 1595, 1596, 2064, 2065
Bme18I	GGWCC	2 cut(s)	678, 792
BmeT110I	CYCGRG	3 cut(s)	247, 1594, 2063
BmgT120I	GGNCC	7 cut(s)	198, 420, 678, 792, 1643, 2000, 2044
BmiI	GGNNCC	6 cut(s)	60, 199, 634, 1645, 1733, 2061
BmrFI	CCNGG	9 cut(s)	196, 552, 720, 1299, 1344, 1595, 1596, 2064, 2065
BmrI	ACTGGG	2 cut(s)	2041, 2081
BmsI	GCATC	3 cut(s)	345, 796, 1927
BmuI	ACTGGG	2 cut(s)	2041, 2081
BpiI	GAAGAC	1 cut(s)	1055
BpuMI	CCSGG	6 cut(s)	196, 552, 1595, 1596, 2064, 2065
BsaI	GGTCTC	1 cut(s)	469
BsaWI	WCCGGW	1 cut(s)	1723
BsaXI	ACNNNNNCTCC	2 cut(s)	1590, 1620
Bsc4I	CCNNNNNNNGG	3 cut(s)	485, 1217, 1987
Bse118I	RCCGGY	2 cut(s)	689, 1816
Bse1I	ACTGG	4 cut(s)	1662, 1694, 2047, 2087
Bse3DI	GCAATG	2 cut(s)	455, 1239
BseBI	CCWGG	3 cut(s)	720, 1299, 1344
BseGI	GGATG	4 cut(s)	374, 1083, 1143, 1942
BseLI	CCNNNNNNNGG	3 cut(s)	485, 1217, 1987
BseMI	GCAATG	2 cut(s)	455, 1239
BseMII	CTCAG	2 cut(s)	365, 955
BseNI	ACTGG	4 cut(s)	1662, 1694, 2047, 2087
BseSI	GKGCMC	1 cut(s)	1833
BseXI	GCAGC	9 cut(s)	119, 335, 338, 486, 540, 714, 1915, 2059, 2069
BsiHKAI	GWGCWC	3 cut(s)	611, 1548, 1833
BsiHKCI	CYCGRG	3 cut(s)	247, 1594, 2063
BsiSI	CCGG	8 cut(s)	195, 552, 636, 690, 1595, 1724, 1817, 2064
BslFI	GGGAC	1 cut(s)	1106
BslI	CCNNNNNNNGG	3 cut(s)	485, 1217, 1987
BsmAI	GTCTC	3 cut(s)	95, 469, 1593
BsmBI	CGTCTC	1 cut(s)	1593
BsmFI	GGGAC	1 cut(s)	1106
Bso31I	GGTCTC	1 cut(s)	469
BsoBI	CYCGRG	3 cut(s)	247, 1594, 2063
Bsp1286I	GDGCHC	3 cut(s)	611, 1548, 1833
Bsp1407I	TGTACA	1 cut(s)	1878
Bsp143I	GATC	9 cut(s)	228, 627, 759, 1069, 1311, 1446, 1623, 1764, 1992
Bsp19I	CCATGG	2 cut(s)	1018, 1211
BspACI	CCGC	5 cut(s)	258, 311, 618, 1633, 1814
BspCNI	CTCAG	2 cut(s)	364, 954
BspLI	GGNNCC	6 cut(s)	60, 199, 634, 1645, 1733, 2061
BspMAI	CTGCAG	2 cut(s)	325, 504
BspPI	GGATC	4 cut(s)	754, 1441, 1772, 2000
BspQI	GCTCTTC	1 cut(s)	599
BspTNI	GGTCTC	1 cut(s)	469
BsrDI	GCAATG	2 cut(s)	455, 1239
BsrFI	RCCGGY	2 cut(s)	689, 1816
BsrGI	TGTACA	1 cut(s)	1878
BsrI	ACTGG	4 cut(s)	1662, 1694, 2047, 2087
BssAI	RCCGGY	2 cut(s)	689, 1816
BssMI	GATC	9 cut(s)	228, 627, 759, 1069, 1311, 1446, 1623, 1764, 1992
BssT1I	CCWWGG	5 cut(s)	479, 649, 1018, 1211, 1986
Bst2UI	CCWGG	3 cut(s)	720, 1299, 1344
Bst4CI	ACNGT	4 cut(s)	517, 929, 1489, 1852
Bst6I	CTCTTC	3 cut(s)	452, 599, 1019
BstAPI	GCANNNNNTGC	1 cut(s)	33
BstAUI	TGTACA	1 cut(s)	1878
BstC8I	GCNNGC	6 cut(s)	256, 376, 526, 691, 1818, 1942
BstDEI	CTNAG	4 cut(s)	351, 810, 941, 1455
BstDSI	CCRYGG	4 cut(s)	849, 1018, 1211, 1583
BstF5I	GGATG	4 cut(s)	374, 1083, 1143, 1942
BstHHI	GCGC	1 cut(s)	98
BstKTI	GATC	9 cut(s)	231, 630, 762, 1072, 1314, 1449, 1626, 1767, 1995
BstMAI	GTCTC	3 cut(s)	95, 469, 1593
BstMBI	GATC	9 cut(s)	228, 627, 759, 1069, 1311, 1446, 1623, 1764, 1992
BstMWI	GCNNNNNNNGC	9 cut(s)	33, 645, 666, 699, 806, 1300, 1364, 1937, 1946
BstNI	CCWGG	3 cut(s)	720, 1299, 1344
BstNSI	RCATGY	8 cut(s)	222, 415, 528, 1007, 1042, 1593, 1783, 1813
BstSCI	CCNGG	9 cut(s)	194, 550, 718, 1297, 1342, 1593, 1594, 2062, 2063
BstSFI	CTRYAG	2 cut(s)	321, 500
BstSLI	GKGCMC	1 cut(s)	1833
BstV1I	GCAGC	9 cut(s)	119, 335, 338, 486, 540, 714, 1915, 2059, 2069
BstV2I	GAAGAC	1 cut(s)	1055
BstX2I	RGATCY	1 cut(s)	1446
BstXI	CCANNNNNNTGG	1 cut(s)	1298
BstYI	RGATCY	1 cut(s)	1446
BsuI	GTATCC	1 cut(s)	1376
BtgI	CCRYGG	4 cut(s)	849, 1018, 1211, 1583
BtsCI	GGATG	4 cut(s)	374, 1083, 1143, 1942
BtsI	GCAGTG	3 cut(s)	1833, 2032, 2032
BtsIMutI	CAGTG	4 cut(s)	1833, 2032, 2032, 2054
Cac8I	GCNNGC	6 cut(s)	256, 376, 526, 691, 1818, 1942
CfoI	GCGC	1 cut(s)	98
Cfr10I	RCCGGY	2 cut(s)	689, 1816
Cfr13I	GGNCC	7 cut(s)	198, 420, 678, 792, 1643, 2000, 2044
Cfr9I	CCCGGG	2 cut(s)	1594, 2063
Csp6I	GTAC	2 cut(s)	945, 1879
CviQI	GTAC	2 cut(s)	945, 1879
DdeI	CTNAG	4 cut(s)	351, 810, 941, 1455
DpnI	GATC	9 cut(s)	230, 629, 761, 1071, 1313, 1448, 1625, 1766, 1994
DpnII	GATC	9 cut(s)	228, 627, 759, 1069, 1311, 1446, 1623, 1764, 1992
DraI	TTTAAA	1 cut(s)	1372
Eam1104I	CTCTTC	3 cut(s)	452, 599, 1019
EarI	CTCTTC	3 cut(s)	452, 599, 1019
Ecl136II	GAGCTC	1 cut(s)	609
Eco130I	CCWWGG	5 cut(s)	479, 649, 1018, 1211, 1986
Eco147I	AGGCCT	2 cut(s)	296, 489
Eco24I	GRGCYC	1 cut(s)	611
Eco31I	GGTCTC	1 cut(s)	469
Eco47I	GGWCC	2 cut(s)	678, 792
Eco53kI	GAGCTC	1 cut(s)	609
Eco57I	CTGAAG	4 cut(s)	70, 433, 1482, 1849
Eco88I	CYCGRG	3 cut(s)	247, 1594, 2063
EcoICRI	GAGCTC	1 cut(s)	609
EcoO109I	RGGNCCY	1 cut(s)	1643
EcoRII	CCWGG	3 cut(s)	718, 1297, 1342
EcoT14I	CCWWGG	5 cut(s)	479, 649, 1018, 1211, 1986
EcoT38I	GRGCYC	1 cut(s)	611
ErhI	CCWWGG	5 cut(s)	479, 649, 1018, 1211, 1986
Esp3I	CGTCTC	1 cut(s)	1593
FaqI	GGGAC	1 cut(s)	1106
FauI	CCCGC	1 cut(s)	1626
FauNDI	CATATG	1 cut(s)	1550
FbaI	TGATCA	2 cut(s)	228, 1311
FblI	GTMKAC	1 cut(s)	1674
FokI	GGATG	4 cut(s)	381, 1070, 1130, 1949
FriOI	GRGCYC	1 cut(s)	611
FspBI	CTAG	7 cut(s)	117, 431, 495, 1056, 1322, 1478, 1905
GlaI	GCGC	1 cut(s)	97
HapII	CCGG	8 cut(s)	195, 552, 636, 690, 1595, 1724, 1817, 2064
HhaI	GCGC	1 cut(s)	98
Hin6I	GCGC	1 cut(s)	96
HinP1I	GCGC	1 cut(s)	96
HincII	GTYRAC	2 cut(s)	44, 400
HindII	GTYRAC	2 cut(s)	44, 400
HinfI	GANTC	7 cut(s)	191, 316, 401, 845, 1115, 1535, 1671
HpaII	CCGG	8 cut(s)	195, 552, 636, 690, 1595, 1724, 1817, 2064
HphI	GGTGA	6 cut(s)	223, 607, 820, 1246, 1430, 1651
Hpy188III	TCNNGA	6 cut(s)	249, 283, 757, 1063, 1532, 2018
Hpy99I	CGWCG	1 cut(s)	2059
HpyCH4III	ACNGT	4 cut(s)	517, 929, 1489, 1852
HpyCH4IV	ACGT	1 cut(s)	768
HpyCH4V	TGCA	9 cut(s)	27, 269, 323, 460, 502, 528, 1472, 1715, 1831
HpyF10VI	GCNNNNNNNGC	9 cut(s)	33, 645, 666, 699, 806, 1300, 1364, 1937, 1946
HpyF3I	CTNAG	4 cut(s)	351, 810, 941, 1455
HpySE526I	ACGT	1 cut(s)	768
HspAI	GCGC	1 cut(s)	96
KroI	GCCGGC	2 cut(s)	689, 1816
KroNI	GCCGGC	2 cut(s)	691, 1818
Ksp22I	TGATCA	2 cut(s)	228, 1311
Kzo9I	GATC	9 cut(s)	228, 627, 759, 1069, 1311, 1446, 1623, 1764, 1992
LguI	GCTCTTC	1 cut(s)	599
LmnI	GCTCC	6 cut(s)	251, 614, 1206, 1318, 1796, 2065
Lsp1109I	GCAGC	9 cut(s)	119, 335, 338, 486, 540, 714, 1915, 2059, 2069
LweI	GCATC	3 cut(s)	345, 796, 1927
MaeI	CTAG	7 cut(s)	117, 431, 495, 1056, 1322, 1478, 1905
MaeII	ACGT	1 cut(s)	768
MaeIII	GTNAC	4 cut(s)	1418, 1433, 1664, 2027
MalI	GATC	9 cut(s)	230, 629, 761, 1071, 1313, 1448, 1625, 1766, 1994
MboI	GATC	9 cut(s)	228, 627, 759, 1069, 1311, 1446, 1623, 1764, 1992
MfeI	CAATTG	1 cut(s)	684
MflI	RGATCY	1 cut(s)	1446
MhlI	GDGCHC	3 cut(s)	611, 1548, 1833
MluCI	AATT	9 cut(s)	28, 48, 153, 684, 922, 1029, 1427, 1564, 1745
MlyI	GAGTC	3 cut(s)	395, 839, 1680
MmeI	TCCRAC	4 cut(s)	168, 1228, 1462, 2078
MroNI	GCCGGC	2 cut(s)	689, 1816
MroXI	GAANNNNTTC	1 cut(s)	1691
MseI	TTAA	5 cut(s)	864, 1154, 1226, 1305, 1371
MslI	CAYNNNNRTG	3 cut(s)	353, 737, 1391
MspI	CCGG	8 cut(s)	195, 552, 636, 690, 1595, 1724, 1817, 2064
MspR9I	CCNGG	9 cut(s)	196, 552, 720, 1299, 1344, 1595, 1596, 2064, 2065
MunI	CAATTG	1 cut(s)	684
MvaI	CCWGG	3 cut(s)	720, 1299, 1344
MwoI	GCNNNNNNNGC	9 cut(s)	33, 645, 666, 699, 806, 1300, 1364, 1937, 1946
NaeI	GCCGGC	2 cut(s)	691, 1818
NciI	CCSGG	6 cut(s)	196, 552, 1595, 1596, 2064, 2065
NcoI	CCATGG	2 cut(s)	1018, 1211
NdeI	CATATG	1 cut(s)	1550
NdeII	GATC	9 cut(s)	228, 627, 759, 1069, 1311, 1446, 1623, 1764, 1992
NgoMIV	GCCGGC	2 cut(s)	689, 1816
NlaIV	GGNNCC	6 cut(s)	60, 199, 634, 1645, 1733, 2061
NmeAIII	GCCGAG	1 cut(s)	72
NmuCI	GTSAC	3 cut(s)	1418, 1433, 2027
NspI	RCATGY	8 cut(s)	222, 415, 528, 1007, 1042, 1593, 1783, 1813
PaeI	GCATGC	1 cut(s)	528
PasI	CCCWGGG	1 cut(s)	1343
PceI	AGGCCT	2 cut(s)	296, 489
PciI	ACATGT	3 cut(s)	411, 1003, 1038
PciSI	GCTCTTC	1 cut(s)	599
PdiI	GCCGGC	2 cut(s)	691, 1818
PdmI	GAANNNNTTC	1 cut(s)	1691
PfeI	GAWTC	4 cut(s)	191, 316, 1115, 1535
PfoI	TCCNGGA	1 cut(s)	550
PleI	GAGTC	3 cut(s)	395, 839, 1679
PpsI	GAGTC	3 cut(s)	395, 839, 1679
PscI	ACATGT	3 cut(s)	411, 1003, 1038
Psp124BI	GAGCTC	1 cut(s)	611
Psp6I	CCWGG	3 cut(s)	718, 1297, 1342
PspGI	CCWGG	3 cut(s)	718, 1297, 1342
PspN4I	GGNNCC	6 cut(s)	60, 199, 634, 1645, 1733, 2061
PspPI	GGNCC	7 cut(s)	198, 420, 678, 792, 1643, 2000, 2044
PstI	CTGCAG	2 cut(s)	325, 504
PsuI	RGATCY	1 cut(s)	1446
RsaI	GTAC	2 cut(s)	946, 1880
RsaNI	GTAC	2 cut(s)	945, 1879
RseI	CAYNNNNRTG	3 cut(s)	353, 737, 1391
SacI	GAGCTC	1 cut(s)	611
SapI	GCTCTTC	1 cut(s)	599
SaqAI	TTAA	5 cut(s)	864, 1154, 1226, 1305, 1371
Sau3AI	GATC	9 cut(s)	228, 627, 759, 1069, 1311, 1446, 1623, 1764, 1992
Sau96I	GGNCC	7 cut(s)	198, 420, 678, 792, 1643, 2000, 2044
SchI	GAGTC	3 cut(s)	395, 839, 1680
ScrFI	CCNGG	9 cut(s)	196, 552, 720, 1299, 1344, 1595, 1596, 2064, 2065
SduI	GDGCHC	3 cut(s)	611, 1548, 1833
SfaNI	GCATC	3 cut(s)	345, 796, 1927
SfcI	CTRYAG	2 cut(s)	321, 500
SinI	GGWCC	2 cut(s)	678, 792
SmaI	CCCGGG	2 cut(s)	1596, 2065
SmiMI	CAYNNNNRTG	3 cut(s)	353, 737, 1391
SphI	GCATGC	1 cut(s)	528
Sse9I	AATT	9 cut(s)	28, 48, 153, 684, 922, 1029, 1427, 1564, 1745
SseBI	AGGCCT	2 cut(s)	296, 489
SsiI	CCGC	5 cut(s)	258, 311, 618, 1633, 1814
SspI	AATATT	1 cut(s)	868
SspMI	CTAG	7 cut(s)	117, 431, 495, 1056, 1322, 1478, 1905
SstI	GAGCTC	1 cut(s)	611
StuI	AGGCCT	2 cut(s)	296, 489
StyD4I	CCNGG	9 cut(s)	194, 550, 718, 1297, 1342, 1593, 1594, 2062, 2063
StyI	CCWWGG	5 cut(s)	479, 649, 1018, 1211, 1986
TaaI	ACNGT	4 cut(s)	517, 929, 1489, 1852
TaiI	ACGT	1 cut(s)	771
TaqI	TCGA	6 cut(s)	672, 843, 897, 909, 1533, 1622
TasI	AATT	9 cut(s)	28, 48, 153, 684, 922, 1029, 1427, 1564, 1745
TatI	WGTACW	1 cut(s)	1878
TauI	GCSGC	2 cut(s)	261, 1816
TfiI	GAWTC	4 cut(s)	191, 316, 1115, 1535
Tru1I	TTAA	5 cut(s)	864, 1154, 1226, 1305, 1371
Tru9I	TTAA	5 cut(s)	864, 1154, 1226, 1305, 1371
TscAI	CASTG	4 cut(s)	1833, 2032, 2039, 2054
TseFI	GTSAC	3 cut(s)	1418, 1433, 2027
TseI	GCWGC	9 cut(s)	132, 323, 326, 499, 528, 702, 1928, 2072, 2082
Tsp45I	GTSAC	3 cut(s)	1418, 1433, 2027
TspDTI	ATGAA	7 cut(s)	204, 742, 1115, 1457, 1700, 1825, 1942
TspGWI	ACGGA	3 cut(s)	1331, 1572, 1683
TspMI	CCCGGG	2 cut(s)	1594, 2063
TspRI	CASTG	4 cut(s)	1833, 2032, 2039, 2054
VneI	GTGCAC	1 cut(s)	1829
VpaK11BI	GGWCC	2 cut(s)	678, 792
XapI	RAATTY	4 cut(s)	48, 153, 1564, 1745
XceI	RCATGY	8 cut(s)	222, 415, 528, 1007, 1042, 1593, 1783, 1813
XmaI	CCCGGG	2 cut(s)	1594, 2063
XmiI	GTMKAC	1 cut(s)	1674
XmnI	GAANNNNTTC	1 cut(s)	1691
XspI	CTAG	7 cut(s)	117, 431, 495, 1056, 1322, 1478, 1905

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.