Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0000850

Physical Location & Seq

Genomic Coordinates Forward (+)

2445528 .. 2449129

Gene Structure 3602 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1030000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2253 bp

ATGACGGTGAAGTACGACGAGGACATCCCTGGGGGGAAGTCTCACTTCAACATCGACGTCGTCGTCGATGAAGAAGTGAATGACTGCCCAATTGAGCAAGTTAGGCTAACGGTTCCAACCACAGACGATCCATCGGAGCCGACCATGACATTCCGGACGTGGGTTCTCGGCCTACTATCATGCGTTGTTCTTGCCTTCGTGAACCAATTTTTCGGGTACCGGCAAAACCATCTATACGTTTCTTCGGTCTCGGCCCAAATCGTAGTCCTCCCCCTAGGAAAGCTGATGGCGGCGGTCCTTCCTGCGACGGAGTTCCAAGTCCCATTTACAAAATGGTCGTTTTCTTTGAATCCGGGGCCTTTCAGTATGAAAGAACATGTTTTGATCACAATATTTGCAAACTCTGGATCAAACAGTGTTTATGCAGTTAACATTATTACAATTGTCAAGGCTTACTACCACAGAGATATTCACATCATGGCAGCCTTCTTGTTATCTCAAACCACTCAGATGCTTGGATATGGATGGGCTGGATTATTCAGAAAATTTCTTGTTGACTCGCCTTACATGTGGTGGCCTTCAAATCTTGTTCAAGTCTCTCTATTCAGGGCATTGCATGAAAGAGAAAAGAGACCCAAAGGAGGCAGAACCAGGATGCAATTCTTCATCATTGTTTTCGTATGCAGCTTTGCGTACTACATTGTCCCAAGCTTATTCTTCCCTTCCCTAACAGCTCTCTCCTTCGTCTGTTGGATTTGGAAGGACTCCATCACTGCGCAACAGATTGGTTCCGGCCTCAAGGGCCTCGGAATTGGCTCGTTTGCCCTCGACTGGTCCACCATCGCCGCCTTCTTGGGCAGCCCTCTAGCCTACCCAGATGTTGCTGTGATCAACATGCTAGTTGGCTTTGTTCTGATTTTTTACATCATTTTGCCTATTACGTATTGGACCAATACCTATGATGCTAAGAAATTCCCAATCTTTTCCTCCCACACATTTGATGTTGATGGCCAAAAGTACAACGTTTCGAGAATTCTCAATAAGAAAACTTTCGATATCGATTTGCCCCGGTATAACAGTTACAGTAAACTCCACCTCAGTACCTTCTTTGCCCTCACCTATGGCTGGGGCTTTGCCACTCTTACATCGACTATTTCACATGTCGGACTCTATCATGGAAAAGAAATCTGGCATCTGTGGAGAAAGACGACCGGTGCAGTGAAAAATCAGCTCGGCGACGTCCACACAAGACTTATGAAGAGGAACTATGAACCAGTCCCAGAATGGTGGTTCCAGATAATCCTTGTTTTCATGGTTGGTCTTGCCATCTTTACCTGTGAAGGTTTCGGCAAACAGCTCCAACTTCCATGGTGGGGAGTTTTACTCGCCTGTACCATCGCACTAGCTTTCACCCTACCCATCGGAGTTATTGCCGCTACAACAAACATGCAACCAGGGCTCAACATAATTACAGAGTTAATTATCGGGTACATTTATCCCGGGAGGCCTCTGGCTAATGTGGCTTTCAAGACCTATGGATATATCAGCATGTCACAGGCACTCATGTTTCTTGGTGACTTCAAATTAGGCCACTATATGAAGATCCCTCCTAAGTCCATGTTTATAGTGCAGTTAGCCGGAACAGTGACGGCTACAAGTGCCTTCTTTGGTACATCATGGTGGCTTCTAACTACTGTGAAGAACATCTGTGATCCAGCAAACTTGCCAGCGGGAAGTCCGTGGACATGCCCGGGTGATGATGTGTTCTACAATGCTTCAATCATATGGGGAGTCATAGGCCCACTCAGAATGTTCACTAAGAAAGGAAACTACCCAGAGTTGAACTGGTTCTTCCTCATCGGCTTTCTGTCACCTATTCCCGGTTGGCTACTCCACAAAAAATTCCCCAATAAGAAGTGGATTCGGCACATAAACATGCCTATAATCCTTGGATCAACCGGTGTCATGCCACCAGCGAAAGCCATAAATTATTTGTCATGGTTTTCAGTTGCACTTGTCTTCAACTTGTATGTTTACAGAAAGCACAAGGGGTGGTGGGCTAGGCATAACTATATCCTATCTGCTGCTTTGGATGCCGGTGTGGCCTTTACAGCAGTTACCCTATATGTCACCCTCCAATCCAAGGAAATTATGGGTCCAAAGTGGTGGGGTCTGGACCAAGACGACCATTGTCCGTTGGCCAAGTGTCCTACTGCACCGGGGATAAAGACTAAAGGGTGTCCAGTTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

751

Amino Acids

84.64

Weight (kDa)

9.25

Isoelectric Point (pI)

38.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	49 - 710	1.1e-165	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0000850)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26590 AT5G55930
fragaria_vesca	FvH4_3g42570 FvH4_3g42651 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660
malus_domestica	MD03G1029800.v1.1 MD03G1029900.v1.1 MD03G1030000.v1.1 MD07G1217200.v1.1 MD11G1034800.v1.1 MD11G1035000.v1.1 MD11G1035100.v1.1
prunus_persica	Prupe.6G026000_v2.0.a1 Prupe.6G026100_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026300_v2.0.a1
pyrus_communis	pycom03g02480 pycom03g02500 pycom11g02890 pycom11g02900
rosa_chinensis	RchiOBHm_Chr5g0076291 RchiOBHm_Chr5g0076301 RchiOBHm_Chr5g0076311 RchiOBHm_Chr5g0076621 RchiOBHm_Chr5g0076671
rosa_laevigata	RLG00000036614 RLG00000036615 RLG00000036616 RLG00000036617
rosa_multiflora	Rmu_co8320621.1_g000001 Rmu_co8419599.1_g000001 Rmu_co8455339.1_g000001 Rmu_sc0005961.1_g000002 Rmu_sc0005961.1_g000003 Rmu_sc0013948.1_g000002 Rmu_sc0035770.1_g000001 Rmu_sc0040547.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005490 Rroxscaffold_1G00005550 Rroxscaffold_1G00005560 Rroxscaffold_1G00005570
rosa_rugosa	Rorug05G0446700.1 Rorug05G0447000 Rorug05G0447100 Rorug05G0447200 Rorug05G0447200 Rorug05G0447300
rosa_samantha	Rh5AG501900 Rh5AG502000 Rh5AG502100 Rh5BG523700 Rh5BG523800 Rh5BG523900 Rh5CG547400 Rh5CG547500 Rh5CG547600 Rh5DG535900 Rh5DG536000 Rh5DG536100 Rh7AG436800
rosa_wichuraiana	Rw0G015040 Rw0G015060 Rw5G046590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	62
AatII	GACGTC	2 cut(s)	60, 1242
Acc16I	TGCGCA	1 cut(s)	777
Acc65I	GGTACC	1 cut(s)	216
AccB1I	GGYRCC	1 cut(s)	216
AccIII	TCCGGA	1 cut(s)	153
AciI	CCGC	5 cut(s)	290, 293, 846, 1434, 1730
AclI	AACGTT	1 cut(s)	1023
AclWI	GGATC	5 cut(s)	122, 415, 1597, 1706, 1960
AcoI	YGGCCR	2 cut(s)	1009, 2199
AcsI	RAATTY	4 cut(s)	545, 971, 1032, 1901
AcyI	GRCGYC	2 cut(s)	57, 1239
AfaI	GTAC	8 cut(s)	14, 218, 695, 1019, 1102, 1393, 1490, 1672
AfiI	CCNNNNNNNGG	7 cut(s)	160, 641, 831, 1125, 1373, 1880, 2143
AflIII	ACRYGT	3 cut(s)	376, 567, 1159
AgeI	ACCGGT	2 cut(s)	1211, 1958
AgsI	TTSAA	9 cut(s)	49, 349, 582, 593, 1528, 1582, 1779, 1843, 2023
AjiI	CACGTC	1 cut(s)	159
AjnI	CCWGG	3 cut(s)	28, 650, 1453
AluBI	AGCT	7 cut(s)	283, 687, 711, 734, 1231, 1357, 1406
AluI	AGCT	7 cut(s)	283, 687, 711, 734, 1231, 1357, 1406
Alw26I	GTCTC	4 cut(s)	45, 253, 601, 625
AlwI	GGATC	5 cut(s)	122, 415, 1597, 1706, 1960
Ama87I	CYCGRG	2 cut(s)	1499, 1750
Aor13HI	TCCGGA	1 cut(s)	153
ApeKI	GCWGC	4 cut(s)	482, 684, 858, 2084
ApoI	RAATTY	4 cut(s)	545, 971, 1032, 1901
AsiGI	ACCGGT	2 cut(s)	1211, 1958
Asp700I	GAANNNNTTC	2 cut(s)	1049, 1847
Asp718I	GGTACC	1 cut(s)	216
AspA2I	CCTAGG	1 cut(s)	274
AspLEI	GCGC	1 cut(s)	778
AspS9I	GGNCC	9 cut(s)	253, 295, 356, 802, 834, 948, 1799, 2156, 2176
AsuC2I	CCSGG	8 cut(s)	354, 1069, 1500, 1501, 1751, 1752, 1881, 2220
AsuHPI	GGTGA	7 cut(s)	19, 1108, 1402, 1586, 1766, 1863, 2122
AvaI	CYCGRG	2 cut(s)	1499, 1750
AvaII	GGWCC	5 cut(s)	295, 834, 948, 2156, 2176
AvrII	CCTAGG	1 cut(s)	274
BaeI	ACNNNNGTAYC	2 cut(s)	1084, 1117
BalI	TGGCCA	2 cut(s)	1011, 2201
BanI	GGYRCC	1 cut(s)	216
BanII	GRGCYC	1 cut(s)	1461
BbsI	GAAGAC	1 cut(s)	2011
BbvI	GCAGC	4 cut(s)	494, 696, 870, 2071
BceAI	ACGGC	1 cut(s)	1665
BciT130I	CCWGG	3 cut(s)	30, 652, 1455
BclI	TGATCA	2 cut(s)	384, 888
BcnI	CCSGG	8 cut(s)	354, 1069, 1500, 1501, 1751, 1752, 1881, 2220
BcoDI	GTCTC	4 cut(s)	45, 253, 601, 625
BfaI	CTAG	5 cut(s)	275, 866, 899, 1403, 2061
BglI	GCCNNNNNGGC	2 cut(s)	801, 2102
BisI	GCNGC	7 cut(s)	291, 483, 685, 846, 859, 1434, 2085
BlnI	CCTAGG	1 cut(s)	274
BlsI	GCNGC	7 cut(s)	292, 484, 686, 847, 860, 1435, 2086
Bme18I	GGWCC	5 cut(s)	295, 834, 948, 2156, 2176
BmeT110I	CYCGRG	2 cut(s)	1499, 1750
BmgBI	CACGTC	1 cut(s)	159
BmgT120I	GGNCC	9 cut(s)	253, 295, 356, 802, 834, 948, 1799, 2156, 2176
BmiI	GGNNCC	7 cut(s)	114, 138, 218, 357, 790, 1292, 2157
BmsI	GCATC	5 cut(s)	501, 645, 952, 1201, 2083
BoxI	GACNNNNGTC	1 cut(s)	2190
BpiI	GAAGAC	1 cut(s)	2011
BplI	GAGNNNNNCTC	2 cut(s)	1368, 1400
BpuEI	CTTGAG	1 cut(s)	782
BpuMI	CCSGG	8 cut(s)	354, 1069, 1500, 1501, 1751, 1752, 1881, 2220
Bsa29I	ATCGAT	1 cut(s)	1059
BsaAI	YACGTR	1 cut(s)	942
BsaHI	GRCGYC	2 cut(s)	57, 1239
BsaI	GGTCTC	2 cut(s)	253, 625
BsaWI	WCCGGW	3 cut(s)	153, 1211, 1958
Bsc4I	CCNNNNNNNGG	7 cut(s)	160, 641, 831, 1125, 1373, 1880, 2143
Bse118I	RCCGGY	4 cut(s)	219, 1211, 1958, 2096
Bse1I	ACTGG	4 cut(s)	836, 1274, 1850, 2243
Bse3DI	GCAATG	1 cut(s)	611
BseAI	TCCGGA	1 cut(s)	153
BseBI	CCWGG	3 cut(s)	30, 652, 1455
BseCI	ATCGAT	1 cut(s)	1059
BseGI	GGATG	4 cut(s)	24, 530, 660, 2098
BseLI	CCNNNNNNNGG	7 cut(s)	160, 641, 831, 1125, 1373, 1880, 2143
BseMI	GCAATG	1 cut(s)	611
BseMII	CTCAG	3 cut(s)	521, 1111, 1819
BseNI	ACTGG	4 cut(s)	836, 1274, 1850, 2243
BseXI	GCAGC	4 cut(s)	494, 696, 870, 2071
BseYI	CCCAGC	1 cut(s)	1125
BsgI	GTGCAG	3 cut(s)	1236, 1649, 2199
Bsh1285I	CGRYCG	1 cut(s)	1212
BshNI	GGYRCC	1 cut(s)	216
BshTI	ACCGGT	2 cut(s)	1211, 1958
BshVI	ATCGAT	1 cut(s)	1059
BsiEI	CGRYCG	1 cut(s)	1212
BsiHKCI	CYCGRG	2 cut(s)	1499, 1750
BslFI	GGGAC	3 cut(s)	305, 689, 1262
BslI	CCNNNNNNNGG	7 cut(s)	160, 641, 831, 1125, 1373, 1880, 2143
BsmAI	GTCTC	4 cut(s)	45, 253, 601, 625
BsmFI	GGGAC	3 cut(s)	305, 689, 1262
Bso31I	GGTCTC	2 cut(s)	253, 625
BsoBI	CYCGRG	2 cut(s)	1499, 1750
Bsp1286I	GDGCHC	1 cut(s)	1461
Bsp13I	TCCGGA	1 cut(s)	153
Bsp143I	GATC	7 cut(s)	127, 384, 407, 888, 1602, 1711, 1952
Bsp19I	CCATGG	1 cut(s)	1367
BspACI	CCGC	5 cut(s)	290, 293, 846, 1434, 1730
BspCNI	CTCAG	3 cut(s)	520, 1110, 1818
BspDI	ATCGAT	1 cut(s)	1059
BspEI	TCCGGA	1 cut(s)	153
BspLI	GGNNCC	7 cut(s)	114, 138, 218, 357, 790, 1292, 2157
BspPI	GGATC	5 cut(s)	122, 415, 1597, 1706, 1960
BspT107I	GGYRCC	1 cut(s)	216
BspTNI	GGTCTC	2 cut(s)	253, 625
BsrDI	GCAATG	1 cut(s)	611
BsrFI	RCCGGY	4 cut(s)	219, 1211, 1958, 2096
BsrI	ACTGG	4 cut(s)	836, 1274, 1850, 2243
BssAI	RCCGGY	4 cut(s)	219, 1211, 1958, 2096
BssMI	GATC	7 cut(s)	127, 384, 407, 888, 1602, 1711, 1952
BssNI	GRCGYC	2 cut(s)	57, 1239
BssT1I	CCWWGG	4 cut(s)	274, 1367, 1948, 2142
Bst2UI	CCWGG	3 cut(s)	30, 652, 1455
Bst4CI	ACNGT	7 cut(s)	7, 112, 416, 1079, 1085, 1645, 1696
Bst6I	CTCTTC	1 cut(s)	1253
BstACI	GRCGYC	2 cut(s)	57, 1239
BstBAI	YACGTR	1 cut(s)	942
BstC8I	GCNNGC	1 cut(s)	1728
BstDEI	CTNAG	6 cut(s)	507, 966, 1097, 1611, 1805, 1818
BstDSI	CCRYGG	2 cut(s)	1367, 1739
BstF5I	GGATG	4 cut(s)	24, 530, 660, 2098
BstHHI	GCGC	1 cut(s)	778
BstKTI	GATC	7 cut(s)	130, 387, 410, 891, 1605, 1714, 1955
BstMAI	GTCTC	4 cut(s)	45, 253, 601, 625
BstMBI	GATC	7 cut(s)	127, 384, 407, 888, 1602, 1711, 1952
BstMCI	CGRYCG	1 cut(s)	1212
BstMWI	GCNNNNNNNGC	8 cut(s)	103, 801, 1456, 1520, 1658, 2093, 2102, 2111
BstNI	CCWGG	3 cut(s)	30, 652, 1455
BstNSI	RCATGY	8 cut(s)	380, 571, 898, 1163, 1450, 1552, 1749, 1939
BstPAI	GACNNNNGTC	1 cut(s)	2190
BstSNI	TACGTA	1 cut(s)	942
BstV1I	GCAGC	4 cut(s)	494, 696, 870, 2071
BstV2I	GAAGAC	1 cut(s)	2011
BstX2I	RGATCY	1 cut(s)	1602
BstXI	CCANNNNNNTGG	2 cut(s)	1287, 2166
BstYI	RGATCY	1 cut(s)	1602
Bsu15I	ATCGAT	1 cut(s)	1059
BsuTUI	ATCGAT	1 cut(s)	1059
BtgI	CCRYGG	2 cut(s)	1367, 1739
BtgZI	GCGATG	2 cut(s)	826, 1381
BtrI	CACGTC	1 cut(s)	159
BtsCI	GGATG	4 cut(s)	24, 530, 660, 2098
BtsI	GCAGTG	2 cut(s)	771, 1224
BtsIMutI	CAGTG	4 cut(s)	421, 771, 1224, 1650
Cac8I	GCNNGC	1 cut(s)	1728
CfoI	GCGC	1 cut(s)	778
Cfr10I	RCCGGY	4 cut(s)	219, 1211, 1958, 2096
Cfr13I	GGNCC	9 cut(s)	253, 295, 356, 802, 834, 948, 1799, 2156, 2176
Cfr9I	CCCGGG	2 cut(s)	1499, 1750
ClaI	ATCGAT	1 cut(s)	1059
Csp6I	GTAC	8 cut(s)	13, 217, 694, 1018, 1101, 1392, 1489, 1671
CspAI	ACCGGT	2 cut(s)	1211, 1958
CviQI	GTAC	8 cut(s)	13, 217, 694, 1018, 1101, 1392, 1489, 1671
DdeI	CTNAG	6 cut(s)	507, 966, 1097, 1611, 1805, 1818
DpnI	GATC	7 cut(s)	129, 386, 409, 890, 1604, 1713, 1954
DpnII	GATC	7 cut(s)	127, 384, 407, 888, 1602, 1711, 1952
DrdI	GACNNNNNNGTC	1 cut(s)	62
DseDI	GACNNNNNNGTC	1 cut(s)	62
EaeI	YGGCCR	2 cut(s)	1009, 2199
Eam1104I	CTCTTC	1 cut(s)	1253
EarI	CTCTTC	1 cut(s)	1253
Eco105I	TACGTA	1 cut(s)	942
Eco130I	CCWWGG	4 cut(s)	274, 1367, 1948, 2142
Eco147I	AGGCCT	1 cut(s)	1507
Eco24I	GRGCYC	1 cut(s)	1461
Eco31I	GGTCTC	2 cut(s)	253, 625
Eco32I	GATATC	1 cut(s)	1057
Eco47I	GGWCC	5 cut(s)	295, 834, 948, 2156, 2176
Eco88I	CYCGRG	2 cut(s)	1499, 1750
EcoO109I	RGGNCCY	2 cut(s)	356, 802
EcoRI	GAATTC	1 cut(s)	1032
EcoRII	CCWGG	3 cut(s)	28, 650, 1453
EcoRV	GATATC	1 cut(s)	1057
EcoT14I	CCWWGG	4 cut(s)	274, 1367, 1948, 2142
EcoT38I	GRGCYC	1 cut(s)	1461
ErhI	CCWWGG	4 cut(s)	274, 1367, 1948, 2142
FalI	AAGNNNNNCTT	2 cut(s)	29, 61
FaqI	GGGAC	3 cut(s)	305, 689, 1262
FauI	CCCGC	1 cut(s)	1723
FauNDI	CATATG	1 cut(s)	1784
FbaI	TGATCA	2 cut(s)	384, 888
Fnu4HI	GCNGC	7 cut(s)	291, 483, 685, 846, 859, 1434, 2085
FokI	GGATG	4 cut(s)	11, 537, 667, 2105
FriOI	GRGCYC	1 cut(s)	1461
Fsp4HI	GCNGC	7 cut(s)	291, 483, 685, 846, 859, 1434, 2085
FspBI	CTAG	5 cut(s)	275, 866, 899, 1403, 2061
FspI	TGCGCA	1 cut(s)	777
GlaI	GCGC	1 cut(s)	777
GluI	GCNGC	7 cut(s)	291, 483, 685, 846, 859, 1434, 2085
GsaI	CCCAGC	1 cut(s)	1129
HhaI	GCGC	1 cut(s)	778
Hin1I	GRCGYC	2 cut(s)	57, 1239
Hin6I	GCGC	1 cut(s)	776
HinP1I	GCGC	1 cut(s)	776
HincII	GTYRAC	2 cut(s)	430, 556
HindII	GTYRAC	2 cut(s)	430, 556
HindIII	AAGCTT	1 cut(s)	709
HinfI	GANTC	6 cut(s)	349, 557, 764, 1167, 1791, 1921
HpaI	GTTAAC	1 cut(s)	430
HphI	GGTGA	7 cut(s)	19, 1108, 1402, 1586, 1766, 1863, 2122
Hpy166II	GTNNAC	9 cut(s)	202, 430, 556, 837, 1088, 1243, 1743, 1815, 2035
Hpy188I	TCNGA	8 cut(s)	136, 510, 542, 809, 915, 1166, 1424, 1808
Hpy188III	TCNNGA	7 cut(s)	154, 199, 405, 1029, 1294, 1528, 2174
Hpy8I	GTNNAC	9 cut(s)	202, 430, 556, 837, 1088, 1243, 1743, 1815, 2035
Hpy99I	CGWCG	7 cut(s)	20, 59, 62, 65, 68, 310, 1241
HpyCH4III	ACNGT	7 cut(s)	7, 112, 416, 1079, 1085, 1645, 1696
HpyCH4IV	ACGT	6 cut(s)	57, 158, 237, 941, 1023, 1239
HpyF10VI	GCNNNNNNNGC	8 cut(s)	103, 801, 1456, 1520, 1658, 2093, 2102, 2111
HpyF3I	CTNAG	6 cut(s)	507, 966, 1097, 1611, 1805, 1818
HpySE526I	ACGT	6 cut(s)	57, 158, 237, 941, 1023, 1239
Hsp92I	GRCGYC	2 cut(s)	57, 1239
HspAI	GCGC	1 cut(s)	776
Kpn2I	TCCGGA	1 cut(s)	153
KpnI	GGTACC	1 cut(s)	220
Ksp22I	TGATCA	2 cut(s)	384, 888
KspAI	GTTAAC	1 cut(s)	430
Kzo9I	GATC	7 cut(s)	127, 384, 407, 888, 1602, 1711, 1952
LmnI	GCTCC	2 cut(s)	136, 1362
Lsp1109I	GCAGC	4 cut(s)	494, 696, 870, 2071
LweI	GCATC	5 cut(s)	501, 645, 952, 1201, 2083
MaeI	CTAG	5 cut(s)	275, 866, 899, 1403, 2061
MaeII	ACGT	6 cut(s)	57, 158, 237, 941, 1023, 1239
MaeIII	GTNAC	7 cut(s)	1079, 1551, 1574, 1645, 1869, 2116, 2128
MalI	GATC	7 cut(s)	129, 386, 409, 890, 1604, 1713, 1954
MboI	GATC	7 cut(s)	127, 384, 407, 888, 1602, 1711, 1952
MboII	GAAGA	9 cut(s)	83, 234, 655, 709, 1270, 1612, 1711, 1843, 2011
MfeI	CAATTG	2 cut(s)	90, 441
MflI	RGATCY	1 cut(s)	1602
MhlI	GDGCHC	1 cut(s)	1461
MlsI	TGGCCA	2 cut(s)	1011, 2201
MluNI	TGGCCA	2 cut(s)	1011, 2201
MlyI	GAGTC	4 cut(s)	551, 758, 1161, 1800
MmeI	TCCRAC	4 cut(s)	140, 731, 1144, 1384
Mox20I	TGGCCA	2 cut(s)	1011, 2201
MroI	TCCGGA	1 cut(s)	153
MroXI	GAANNNNTTC	2 cut(s)	1049, 1847
MscI	TGGCCA	2 cut(s)	1011, 2201
MseI	TTAA	2 cut(s)	429, 1478
MslI	CAYNNNNRTG	3 cut(s)	509, 1678, 1934
Msp20I	TGGCCA	2 cut(s)	1011, 2201
MspA1I	CMGCKG	1 cut(s)	1730
MunI	CAATTG	2 cut(s)	90, 441
MvaI	CCWGG	3 cut(s)	30, 652, 1455
MwoI	GCNNNNNNNGC	8 cut(s)	103, 801, 1456, 1520, 1658, 2093, 2102, 2111
NciI	CCSGG	8 cut(s)	354, 1069, 1500, 1501, 1751, 1752, 1881, 2220
NcoI	CCATGG	1 cut(s)	1367
NdeI	CATATG	1 cut(s)	1784
NdeII	GATC	7 cut(s)	127, 384, 407, 888, 1602, 1711, 1952
NlaIV	GGNNCC	7 cut(s)	114, 138, 218, 357, 790, 1292, 2157
NmeAIII	GCCGAG	3 cut(s)	147, 230, 1212
NmuCI	GTSAC	5 cut(s)	1551, 1574, 1645, 1869, 2128
NsbI	TGCGCA	1 cut(s)	777
NspI	RCATGY	8 cut(s)	380, 571, 898, 1163, 1450, 1552, 1749, 1939
PasI	CCCWGGG	1 cut(s)	29
PceI	AGGCCT	1 cut(s)	1507
PciI	ACATGT	3 cut(s)	376, 567, 1159
PcsI	WCGNNNNNNNCGW	2 cut(s)	60, 63
PdmI	GAANNNNTTC	2 cut(s)	1049, 1847
PfeI	GAWTC	2 cut(s)	349, 1921
PflFI	GACNNNGTC	1 cut(s)	59
PinAI	ACCGGT	2 cut(s)	1211, 1958
PkrI	GCNGC	7 cut(s)	292, 484, 686, 847, 860, 1435, 2086
PleI	GAGTC	4 cut(s)	551, 758, 1161, 1799
PpsI	GAGTC	4 cut(s)	551, 758, 1161, 1799
Ppu21I	YACGTR	1 cut(s)	942
PscI	ACATGT	3 cut(s)	376, 567, 1159
PshAI	GACNNNNGTC	1 cut(s)	2190
Psp1406I	AACGTT	1 cut(s)	1023
Psp6I	CCWGG	3 cut(s)	28, 650, 1453
PspFI	CCCAGC	1 cut(s)	1125
PspGI	CCWGG	3 cut(s)	28, 650, 1453
PspN4I	GGNNCC	7 cut(s)	114, 138, 218, 357, 790, 1292, 2157
PspPI	GGNCC	9 cut(s)	253, 295, 356, 802, 834, 948, 1799, 2156, 2176
PsuI	RGATCY	1 cut(s)	1602
PsyI	GACNNNGTC	1 cut(s)	59
RsaI	GTAC	8 cut(s)	14, 218, 695, 1019, 1102, 1393, 1490, 1672
RsaNI	GTAC	8 cut(s)	13, 217, 694, 1018, 1101, 1392, 1489, 1671
RseI	CAYNNNNRTG	3 cut(s)	509, 1678, 1934
SaqAI	TTAA	2 cut(s)	429, 1478
SatI	GCNGC	7 cut(s)	291, 483, 685, 846, 859, 1434, 2085
Sau3AI	GATC	7 cut(s)	127, 384, 407, 888, 1602, 1711, 1952
Sau96I	GGNCC	9 cut(s)	253, 295, 356, 802, 834, 948, 1799, 2156, 2176
SchI	GAGTC	4 cut(s)	551, 758, 1161, 1800
SduI	GDGCHC	1 cut(s)	1461
SfaNI	GCATC	5 cut(s)	501, 645, 952, 1201, 2083
SfiI	GGCCNNNNNGGCC	1 cut(s)	801
SinI	GGWCC	5 cut(s)	295, 834, 948, 2156, 2176
SmaI	CCCGGG	2 cut(s)	1501, 1752
SmiMI	CAYNNNNRTG	3 cut(s)	509, 1678, 1934
SmlI	CTYRAG	1 cut(s)	797
SmoI	CTYRAG	1 cut(s)	797
SnaBI	TACGTA	1 cut(s)	942
SseBI	AGGCCT	1 cut(s)	1507
SsiI	CCGC	5 cut(s)	290, 293, 846, 1434, 1730
SspI	AATATT	1 cut(s)	393
SspMI	CTAG	5 cut(s)	275, 866, 899, 1403, 2061
StuI	AGGCCT	1 cut(s)	1507
StyI	CCWWGG	4 cut(s)	274, 1367, 1948, 2142
TaaI	ACNGT	7 cut(s)	7, 112, 416, 1079, 1085, 1645, 1696
TaiI	ACGT	6 cut(s)	60, 161, 240, 944, 1026, 1242
TaqI	TCGA	7 cut(s)	54, 66, 828, 1028, 1053, 1059, 1148
TaqII	GACCGA	1 cut(s)	235
TatI	WGTACW	1 cut(s)	1017
TauI	GCSGC	3 cut(s)	293, 848, 1436
TfiI	GAWTC	2 cut(s)	349, 1921
Tru1I	TTAA	2 cut(s)	429, 1478
Tru9I	TTAA	2 cut(s)	429, 1478
TscAI	CASTG	4 cut(s)	421, 778, 1224, 1650
TseFI	GTSAC	5 cut(s)	1551, 1574, 1645, 1869, 2128
TseI	GCWGC	4 cut(s)	482, 684, 858, 2084
Tsp45I	GTSAC	5 cut(s)	1551, 1574, 1645, 1869, 2128
TspDTI	ATGAA	8 cut(s)	84, 383, 633, 655, 1271, 1284, 1300, 1613
TspGWI	ACGGA	3 cut(s)	323, 1728, 2184
TspMI	CCCGGG	2 cut(s)	1499, 1750
TspRI	CASTG	4 cut(s)	421, 778, 1224, 1650
Tth111I	GACNNNGTC	1 cut(s)	59
VpaK11BI	GGWCC	5 cut(s)	295, 834, 948, 2156, 2176
XapI	RAATTY	4 cut(s)	545, 971, 1032, 1901
XceI	RCATGY	8 cut(s)	380, 571, 898, 1163, 1450, 1552, 1749, 1939
XcmI	CCANNNNNNNNNTGG	4 cut(s)	330, 1281, 1842, 2149
XmaI	CCCGGG	2 cut(s)	1499, 1750
XmaJI	CCTAGG	1 cut(s)	274
XmnI	GAANNNNTTC	2 cut(s)	1049, 1847
XspI	CTAG	5 cut(s)	275, 866, 899, 1403, 2061
ZraI	GACGTC	2 cut(s)	58, 1240

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.