Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005961.1

Orthogroup ID

OG0000850

Physical Location & Seq

Genomic Coordinates Forward (+)

28520 .. 31932

Gene Structure 3413 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005961.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

atggatccagcggcgaatacaagattgacaactgaccgagccaaattgaccaaaatattcagcaataatgagacagaagaccacaatacaaaactattagatgatgagttcaacgacagcccaattgagcaggtgaggctaacagttccgatcaccgacgacccttcagttcccgccttaacctttcgtacgtgggttctaggccttttgtcatgctgcactcttgcctttttgaaccagttctttggttaccgccaaaaccagctctacatttcttcagtctcagcacaaatcctcgtcctccctctcggaaaacttatggctaaaactctcccaacaaaacaattccgagttatgggacggacattttcgttcaaccccggacctttcaacttgaaagagcatgtgctgatcaccatctttgcgaattcaggatcaaatagtgtttatgcagttaacattatcactattgtgaaggctttctaccgcagaagcatgcatcctatggcagccttcttgttagcccaaagcactcaattgcttggatatgggtgggctgggttgttcagaaagtaccttgttgactccccatatatgtggtggcctgacaatctggttcaggactccgtcaccgcccaacagattggttccggcctcaatggccttggcattggctcgtttggccttgattggtcaactgttgctagcttcttgaagagcccattagccacacccggttttgtcttcatgaacatgttggctggttttgtcttcattttctacattcttacccccattttttattggtccaatgtaaaagatgccaagaagtttcccttcttttcttcttctactttcgactccactggcaaacgctataatgtttcccgagttctggaccagaaaactttcgatattaatttgaaagagtataacagttacagtaaactccatctctctatgtactttgcctcgagttatgggtggagctttgctggtctgacagcaactatttcacatgttgcactcttccatggaaaagacatctgggatatgtggaaaaagacttctaccgcagcgaaagatcagcttggggacatccacacacggttgatgaagaagaactacgaggcagtcccacagtggtggtttcacatcatgcttgttttaatggttggcctttccatctgggtctgtgaaggttttgggaaacagctccaacttccatggtggggagtcttactggcttgtgccattgcactaactttccccttccccattggcattattcaagccacaacaaacatgcaaccggggctcaatgtgatcacagagttggttattgggtatctttatcctgggaagcctcttgccaatgtgactttcaaaacatatggctatatcagcatgtcacaagcactcatgtttctcggtgacttcaaattaggtcactatatgaagatccctcccaagtccatgtttattgcgcagttagctggaacactggtcgcttctagtacctttttcagcacatcctggtggcttctcaacactgttgagaacatctgtgatccatcaaaactgccagagggaagtccatggacatgtcctggtgatgaggtcttctataatgcctcaatcatttggggagttataggccctctcagaatgttcactaagcatggaaactacccggagatgaactggttcttcctacttggtttacttgcacctataccagtttggctcctatcgcgcaaattccccaagctagagtggattaagctcataaacatgcctatcatcattggaaccacagcagtcatgccaccagctaaagctgtccactacttgatgtggttcacagtcggaattttctttagcttctatgtttatcgacaacacagggcatggtgggctaggcataactatatcctatcagctgctttggatgccggcgtggccttcacggcagttcttgtgtatttcacccttcagagtaacggtattaatggtccaaaatggtggggtcaggacagcactgatcattgtccgttggccaagtgccccacagctccaggagtagtggtcaaagggtgtccagttttttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

703

Amino Acids

79.3

Weight (kDa)

9.22

Isoelectric Point (pI)

37.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000850)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26590 AT5G55930
fragaria_vesca	FvH4_3g42570 FvH4_3g42651 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660
malus_domestica	MD03G1029800.v1.1 MD03G1029900.v1.1 MD03G1030000.v1.1 MD07G1217200.v1.1 MD11G1034800.v1.1 MD11G1035000.v1.1 MD11G1035100.v1.1
prunus_persica	Prupe.6G026000_v2.0.a1 Prupe.6G026100_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026300_v2.0.a1
pyrus_communis	pycom03g02480 pycom03g02500 pycom11g02890 pycom11g02900
rosa_chinensis	RchiOBHm_Chr5g0076291 RchiOBHm_Chr5g0076301 RchiOBHm_Chr5g0076311 RchiOBHm_Chr5g0076621 RchiOBHm_Chr5g0076671
rosa_laevigata	RLG00000036614 RLG00000036615 RLG00000036616 RLG00000036617
rosa_multiflora	Rmu_co8320621.1_g000001 Rmu_co8419599.1_g000001 Rmu_co8455339.1_g000001 Rmu_sc0005961.1_g000002 Rmu_sc0005961.1_g000003 Rmu_sc0013948.1_g000002 Rmu_sc0035770.1_g000001 Rmu_sc0040547.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005490 Rroxscaffold_1G00005550 Rroxscaffold_1G00005560 Rroxscaffold_1G00005570
rosa_rugosa	Rorug05G0446700.1 Rorug05G0447000 Rorug05G0447100 Rorug05G0447200 Rorug05G0447200 Rorug05G0447300
rosa_samantha	Rh5AG501900 Rh5AG502000 Rh5AG502100 Rh5BG523700 Rh5BG523800 Rh5BG523900 Rh5CG547400 Rh5CG547500 Rh5CG547600 Rh5DG535900 Rh5DG536000 Rh5DG536100 Rh7AG436800
rosa_wichuraiana	Rw0G015040 Rw0G015060 Rw5G046590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	121
Acc16I	TGCGCA	1 cut(s)	1488
Acc36I	ACCTGC	1 cut(s)	121
AccII	CGCG	1 cut(s)	1756
AciI	CCGC	6 cut(s)	11, 174, 253, 487, 633, 1074
AclWI	GGATC	4 cut(s)	12, 442, 1456, 1565
AcoI	YGGCCR	1 cut(s)	2058
AcsI	RAATTY	3 cut(s)	427, 1760, 1872
AcuI	CTGAAG	3 cut(s)	150, 261, 1979
AfaI	GTAC	4 cut(s)	190, 575, 965, 1519
AfiI	CCNNNNNNNGG	3 cut(s)	355, 895, 1232
AflIII	ACRYGT	3 cut(s)	753, 1018, 1604
AjnI	CCWGG	4 cut(s)	1357, 1535, 1609, 2077
AjuI	GAANNNNNNNTTGG	2 cut(s)	1367, 1399
AleI	CACNNNNGTG	2 cut(s)	470, 1144
Alw26I	GTCTC	2 cut(s)	65, 286
AlwI	GGATC	4 cut(s)	12, 442, 1456, 1565
Ama87I	CYCGRG	2 cut(s)	888, 973
AoxI	GGCC	9 cut(s)	202, 602, 652, 661, 682, 1177, 1657, 1962, 2058
ApeKI	GCWGC	4 cut(s)	216, 509, 1076, 1943
ApoI	RAATTY	3 cut(s)	427, 1760, 1872
AseI	ATTAAT	2 cut(s)	918, 2010
Asp700I	GAANNNNTTC	4 cut(s)	239, 479, 908, 1706
AspLEI	GCGC	2 cut(s)	1489, 1758
AspS9I	GGNCC	5 cut(s)	383, 807, 898, 1658, 2015
AsuC2I	CCSGG	4 cut(s)	381, 735, 1314, 1694
AsuHPI	GGTGA	7 cut(s)	145, 145, 406, 622, 1445, 1625, 1981
AsuNHI	GCTAGC	1 cut(s)	704
AvaI	CYCGRG	2 cut(s)	888, 973
AvaII	GGWCC	4 cut(s)	383, 807, 898, 2015
BaeGI	GKGCMC	1 cut(s)	2069
BalI	TGGCCA	1 cut(s)	2060
BamHI	GGATCC	1 cut(s)	4
BanII	GRGCYC	2 cut(s)	722, 1320
BarI	GAAGNNNNNNTAC	4 cut(s)	467, 499, 1109, 1141
BbsI	GAAGAC	4 cut(s)	84, 736, 763, 1615
BbvI	GCAGC	4 cut(s)	203, 521, 1088, 1930
BccI	CCATC	4 cut(s)	425, 960, 1193, 1582
BceAI	ACGGC	1 cut(s)	1986
BciT130I	CCWGG	4 cut(s)	1359, 1537, 1611, 2079
BclI	TGATCA	3 cut(s)	411, 1326, 2044
BcnI	CCSGG	4 cut(s)	381, 735, 1314, 1694
BcoDI	GTCTC	2 cut(s)	65, 286
BfaI	CTAG	5 cut(s)	200, 705, 1515, 1772, 1920
BfuAI	ACCTGC	1 cut(s)	121
BglI	GCCNNNNNGGC	3 cut(s)	660, 1961, 1970
BisI	GCNGC	5 cut(s)	12, 217, 510, 1077, 1944
BlsI	GCNGC	5 cut(s)	13, 218, 511, 1078, 1945
Bme1390I	CCNGG	8 cut(s)	381, 735, 1314, 1359, 1537, 1611, 1694, 2079
Bme18I	GGWCC	4 cut(s)	383, 807, 898, 2015
BmeT110I	CYCGRG	2 cut(s)	888, 973
BmgT120I	GGNCC	5 cut(s)	383, 807, 898, 1658, 2015
BmiI	GGNNCC	4 cut(s)	6, 649, 1748, 1813
BmrFI	CCNGG	8 cut(s)	381, 735, 1314, 1359, 1537, 1611, 1694, 2079
BmsI	GCATC	3 cut(s)	508, 811, 1942
BmtI	GCTAGC	1 cut(s)	708
BpiI	GAAGAC	4 cut(s)	84, 736, 763, 1615
BpmI	CTGGAG	1 cut(s)	2061
BpuMI	CCSGG	4 cut(s)	381, 735, 1314, 1694
BsaAI	YACGTR	1 cut(s)	192
BsaBI	GATNNNNATC	1 cut(s)	416
BsaJI	CCNNGG	7 cut(s)	379, 664, 1033, 1226, 1313, 1358, 1598
BsaXI	ACNNNNNCTCC	2 cut(s)	2073, 2103
Bsc4I	CCNNNNNNNGG	3 cut(s)	355, 895, 1232
Bse118I	RCCGGY	1 cut(s)	1955
Bse1I	ACTGG	7 cut(s)	238, 871, 1248, 1509, 1709, 1739, 2102
Bse3DI	GCAATG	1 cut(s)	1254
Bse8I	GATNNNNATC	1 cut(s)	416
BseBI	CCWGG	4 cut(s)	1359, 1537, 1611, 2079
BseDI	CCNNGG	7 cut(s)	379, 664, 1033, 1226, 1313, 1358, 1598
BseGI	GGATG	4 cut(s)	499, 1098, 1532, 1957
BseJI	GATNNNNATC	1 cut(s)	416
BseLI	CCNNNNNNNGG	3 cut(s)	355, 895, 1232
BseMI	GCAATG	1 cut(s)	1254
BseMII	CTCAG	2 cut(s)	297, 1678
BseNI	ACTGG	7 cut(s)	238, 871, 1248, 1509, 1709, 1739, 2102
BseSI	GKGCMC	1 cut(s)	2069
BseXI	GCAGC	4 cut(s)	203, 521, 1088, 1930
BseYI	CCCAGC	1 cut(s)	557
BsgI	GTGCAG	1 cut(s)	202
Bsh1236I	CGCG	1 cut(s)	1756
BshFI	GGCC	9 cut(s)	204, 604, 654, 663, 684, 1179, 1659, 1964, 2060
BsiHKCI	CYCGRG	2 cut(s)	888, 973
BsiSI	CCGG	6 cut(s)	381, 651, 735, 1313, 1694, 1956
BsiWI	CGTACG	1 cut(s)	188
BslFI	GGGAC	3 cut(s)	372, 1109, 1121
BslI	CCNNNNNNNGG	3 cut(s)	355, 895, 1232
BsmAI	GTCTC	2 cut(s)	65, 286
BsmFI	GGGAC	3 cut(s)	372, 1109, 1121
BsnI	GGCC	9 cut(s)	204, 604, 654, 663, 684, 1179, 1659, 1964, 2060
BsoBI	CYCGRG	2 cut(s)	888, 973
Bsp1286I	GDGCHC	3 cut(s)	722, 1320, 2069
Bsp143I	GATC	9 cut(s)	4, 150, 411, 434, 1084, 1326, 1461, 1570, 2044
Bsp19I	CCATGG	3 cut(s)	1033, 1226, 1598
BspACI	CCGC	6 cut(s)	11, 174, 253, 487, 633, 1074
BspANI	GGCC	9 cut(s)	204, 604, 654, 663, 684, 1179, 1659, 1964, 2060
BspCNI	CTCAG	2 cut(s)	296, 1677
BspFNI	CGCG	1 cut(s)	1756
BspHI	TCATGA	1 cut(s)	747
BspLI	GGNNCC	4 cut(s)	6, 649, 1748, 1813
BspMI	ACCTGC	1 cut(s)	121
BspOI	GCTAGC	1 cut(s)	708
BspPI	GGATC	4 cut(s)	12, 442, 1456, 1565
BspQI	GCTCTTC	1 cut(s)	710
BsrDI	GCAATG	1 cut(s)	1254
BsrFI	RCCGGY	1 cut(s)	1955
BsrI	ACTGG	7 cut(s)	238, 871, 1248, 1509, 1709, 1739, 2102
BssAI	RCCGGY	1 cut(s)	1955
BssECI	CCNNGG	7 cut(s)	379, 664, 1033, 1226, 1313, 1358, 1598
BssMI	GATC	9 cut(s)	4, 150, 411, 434, 1084, 1326, 1461, 1570, 2044
BssT1I	CCWWGG	4 cut(s)	664, 1033, 1226, 1598
Bst2UI	CCWGG	4 cut(s)	1359, 1537, 1611, 2079
Bst4CI	ACNGT	9 cut(s)	145, 700, 938, 944, 1110, 1143, 1555, 1867, 2006
Bst6I	CTCTTC	2 cut(s)	710, 1034
BstBAI	YACGTR	1 cut(s)	192
BstC8I	GCNNGC	3 cut(s)	497, 706, 1957
BstDEI	CTNAG	3 cut(s)	283, 1664, 1677
BstDSI	CCRYGG	3 cut(s)	1033, 1226, 1598
BstEII	GGTNACC	1 cut(s)	248
BstF5I	GGATG	4 cut(s)	499, 1098, 1532, 1957
BstFNI	CGCG	1 cut(s)	1756
BstHHI	GCGC	2 cut(s)	1489, 1758
BstKTI	GATC	9 cut(s)	7, 153, 414, 437, 1087, 1329, 1464, 1573, 2047
BstMAI	GTCTC	2 cut(s)	65, 286
BstMBI	GATC	9 cut(s)	4, 150, 411, 434, 1084, 1326, 1461, 1570, 2044
BstNI	CCWGG	4 cut(s)	1359, 1537, 1611, 2079
BstNSI	RCATGY	8 cut(s)	407, 499, 757, 1022, 1309, 1411, 1608, 1798
BstPI	GGTNACC	1 cut(s)	248
BstSCI	CCNGG	8 cut(s)	379, 733, 1312, 1357, 1535, 1609, 1692, 2077
BstSLI	GKGCMC	1 cut(s)	2069
BstUI	CGCG	1 cut(s)	1756
BstV1I	GCAGC	4 cut(s)	203, 521, 1088, 1930
BstV2I	GAAGAC	4 cut(s)	84, 736, 763, 1615
BstX2I	RGATCY	2 cut(s)	4, 1461
BstXI	CCANNNNNNTGG	5 cut(s)	245, 597, 644, 1146, 2025
BstYI	RGATCY	2 cut(s)	4, 1461
BsuRI	GGCC	9 cut(s)	204, 604, 654, 663, 684, 1179, 1659, 1964, 2060
BtgI	CCRYGG	3 cut(s)	1033, 1226, 1598
BtsCI	GGATG	4 cut(s)	499, 1098, 1532, 1957
BtsIMutI	CAGTG	5 cut(s)	864, 1148, 1502, 1551, 2040
BveI	ACCTGC	1 cut(s)	121
Cac8I	GCNNGC	3 cut(s)	497, 706, 1957
CciI	TCATGA	1 cut(s)	747
CfoI	GCGC	2 cut(s)	1489, 1758
Cfr10I	RCCGGY	1 cut(s)	1955
Cfr13I	GGNCC	5 cut(s)	383, 807, 898, 1658, 2015
Csp6I	GTAC	4 cut(s)	189, 574, 964, 1518
CviQI	GTAC	4 cut(s)	189, 574, 964, 1518
DdeI	CTNAG	3 cut(s)	283, 1664, 1677
DpnI	GATC	9 cut(s)	6, 152, 413, 436, 1086, 1328, 1463, 1572, 2046
DpnII	GATC	9 cut(s)	4, 150, 411, 434, 1084, 1326, 1461, 1570, 2044
EaeI	YGGCCR	1 cut(s)	2058
Eam1104I	CTCTTC	2 cut(s)	710, 1034
EarI	CTCTTC	2 cut(s)	710, 1034
Eco130I	CCWWGG	4 cut(s)	664, 1033, 1226, 1598
Eco147I	AGGCCT	1 cut(s)	204
Eco24I	GRGCYC	2 cut(s)	722, 1320
Eco47I	GGWCC	4 cut(s)	383, 807, 898, 2015
Eco57I	CTGAAG	3 cut(s)	150, 261, 1979
Eco88I	CYCGRG	2 cut(s)	888, 973
Eco91I	GGTNACC	1 cut(s)	248
EcoO109I	RGGNCCY	1 cut(s)	1658
EcoO65I	GGTNACC	1 cut(s)	248
EcoRI	GAATTC	1 cut(s)	427
EcoRII	CCWGG	4 cut(s)	1357, 1535, 1609, 2077
EcoT14I	CCWWGG	4 cut(s)	664, 1033, 1226, 1598
EcoT22I	ATGCAT	1 cut(s)	501
EcoT38I	GRGCYC	2 cut(s)	722, 1320
ErhI	CCWWGG	4 cut(s)	664, 1033, 1226, 1598
FalI	AAGNNNNNCTT	4 cut(s)	821, 853, 1074, 1106
FaqI	GGGAC	3 cut(s)	372, 1109, 1121
FauI	CCCGC	1 cut(s)	181
FauNDI	CATATG	1 cut(s)	1393
FbaI	TGATCA	3 cut(s)	411, 1326, 2044
Fnu4HI	GCNGC	5 cut(s)	12, 217, 510, 1077, 1944
FokI	GGATG	4 cut(s)	486, 1085, 1519, 1964
FriOI	GRGCYC	2 cut(s)	722, 1320
Fsp4HI	GCNGC	5 cut(s)	12, 217, 510, 1077, 1944
FspBI	CTAG	5 cut(s)	200, 705, 1515, 1772, 1920
FspI	TGCGCA	1 cut(s)	1488
GlaI	GCGC	2 cut(s)	1488, 1757
GluI	GCNGC	5 cut(s)	12, 217, 510, 1077, 1944
GsaI	CCCAGC	1 cut(s)	561
GsuI	CTGGAG	1 cut(s)	2061
HaeIII	GGCC	9 cut(s)	204, 604, 654, 663, 684, 1179, 1659, 1964, 2060
HapII	CCGG	6 cut(s)	381, 651, 735, 1313, 1694, 1956
HhaI	GCGC	2 cut(s)	1489, 1758
Hin6I	GCGC	2 cut(s)	1487, 1756
HinP1I	GCGC	2 cut(s)	1487, 1756
HincII	GTYRAC	3 cut(s)	457, 583, 696
HindII	GTYRAC	3 cut(s)	457, 583, 696
HinfI	GANTC	4 cut(s)	584, 623, 860, 1236
HpaI	GTTAAC	1 cut(s)	457
HpaII	CCGG	6 cut(s)	381, 651, 735, 1313, 1694, 1956
HphI	GGTGA	7 cut(s)	145, 145, 406, 622, 1445, 1625, 1981
Hpy166II	GTNNAC	8 cut(s)	457, 583, 696, 947, 1674, 1724, 1846, 1863
Hpy188I	TCNGA	8 cut(s)	150, 311, 350, 569, 1002, 1667, 1871, 1998
Hpy188III	TCNNGA	7 cut(s)	432, 620, 712, 748, 888, 896, 2033
Hpy8I	GTNNAC	8 cut(s)	457, 583, 696, 947, 1674, 1724, 1846, 1863
Hpy99I	CGWCG	1 cut(s)	161
HpyAV	CCTTC	8 cut(s)	174, 469, 523, 847, 1193, 1282, 1975, 2003
HpyCH4III	ACNGT	9 cut(s)	145, 700, 938, 944, 1110, 1143, 1555, 1867, 2006
HpyCH4IV	ACGT	1 cut(s)	191
HpyCH4V	TGCA	7 cut(s)	219, 452, 499, 1025, 1259, 1309, 1730
HpyF3I	CTNAG	3 cut(s)	283, 1664, 1677
HpySE526I	ACGT	1 cut(s)	191
HspAI	GCGC	2 cut(s)	1487, 1756
KroI	GCCGGC	1 cut(s)	1955
KroNI	GCCGGC	1 cut(s)	1957
Ksp22I	TGATCA	3 cut(s)	411, 1326, 2044
KspAI	GTTAAC	1 cut(s)	457
Kzo9I	GATC	9 cut(s)	4, 150, 411, 434, 1084, 1326, 1461, 1570, 2044
LguI	GCTCTTC	1 cut(s)	710
LmnI	GCTCC	4 cut(s)	987, 1221, 1752, 2080
Lsp1109I	GCAGC	4 cut(s)	203, 521, 1088, 1930
LweI	GCATC	3 cut(s)	508, 811, 1942
MaeI	CTAG	5 cut(s)	200, 705, 1515, 1772, 1920
MaeII	ACGT	1 cut(s)	191
MaeIII	GTNAC	8 cut(s)	248, 628, 938, 1378, 1410, 1433, 1448, 2000
MalI	GATC	9 cut(s)	6, 152, 413, 436, 1086, 1328, 1463, 1572, 2046
MboI	GATC	9 cut(s)	4, 150, 411, 434, 1084, 1326, 1461, 1570, 2044
MfeI	CAATTG	2 cut(s)	123, 536
MflI	RGATCY	2 cut(s)	4, 1461
MhlI	GDGCHC	3 cut(s)	722, 1320, 2069
MlsI	TGGCCA	1 cut(s)	2060
MluCI	AATT	9 cut(s)	44, 123, 344, 427, 536, 919, 1442, 1760, 1872
MluNI	TGGCCA	1 cut(s)	2060
MlyI	GAGTC	4 cut(s)	578, 617, 854, 1245
MmeI	TCCRAC	2 cut(s)	1243, 1849
Mox20I	TGGCCA	1 cut(s)	2060
Mph1103I	ATGCAT	1 cut(s)	501
MroNI	GCCGGC	1 cut(s)	1955
MroXI	GAANNNNTTC	4 cut(s)	239, 479, 908, 1706
MscI	TGGCCA	1 cut(s)	2060
MseI	TTAA	6 cut(s)	179, 456, 918, 1169, 1782, 2010
MslI	CAYNNNNRTG	7 cut(s)	470, 595, 752, 1144, 1537, 1603, 1793
Msp20I	TGGCCA	1 cut(s)	2060
MspA1I	CMGCKG	2 cut(s)	11, 1943
MspI	CCGG	6 cut(s)	381, 651, 735, 1313, 1694, 1956
MspR9I	CCNGG	8 cut(s)	381, 735, 1314, 1359, 1537, 1611, 1694, 2079
MunI	CAATTG	2 cut(s)	123, 536
MvaI	CCWGG	4 cut(s)	1359, 1537, 1611, 2079
MvnI	CGCG	1 cut(s)	1756
NaeI	GCCGGC	1 cut(s)	1957
NciI	CCSGG	4 cut(s)	381, 735, 1314, 1694
NcoI	CCATGG	3 cut(s)	1033, 1226, 1598
NdeI	CATATG	1 cut(s)	1393
NdeII	GATC	9 cut(s)	4, 150, 411, 434, 1084, 1326, 1461, 1570, 2044
NgoMIV	GCCGGC	1 cut(s)	1955
NheI	GCTAGC	1 cut(s)	704
NlaIV	GGNNCC	4 cut(s)	6, 649, 1748, 1813
NmuCI	GTSAC	5 cut(s)	628, 1378, 1410, 1433, 1448
NsbI	TGCGCA	1 cut(s)	1488
NsiI	ATGCAT	1 cut(s)	501
NspI	RCATGY	8 cut(s)	407, 499, 757, 1022, 1309, 1411, 1608, 1798
OliI	CACNNNNGTG	2 cut(s)	470, 1144
PaeI	GCATGC	1 cut(s)	499
PaeR7I	CTCGAG	1 cut(s)	973
PagI	TCATGA	1 cut(s)	747
PaqCI	CACCTGC	1 cut(s)	121
PceI	AGGCCT	1 cut(s)	204
PciI	ACATGT	3 cut(s)	753, 1018, 1604
PciSI	GCTCTTC	1 cut(s)	710
PdiI	GCCGGC	1 cut(s)	1957
PdmI	GAANNNNTTC	4 cut(s)	239, 479, 908, 1706
Pfl23II	CGTACG	1 cut(s)	188
PflFI	GACNNNGTC	1 cut(s)	626
PfoI	TCCNGGA	1 cut(s)	2077
PkrI	GCNGC	5 cut(s)	13, 218, 511, 1078, 1945
PleI	GAGTC	4 cut(s)	578, 617, 854, 1244
PpsI	GAGTC	4 cut(s)	578, 617, 854, 1244
Ppu21I	YACGTR	1 cut(s)	192
PscI	ACATGT	3 cut(s)	753, 1018, 1604
PshBI	ATTAAT	2 cut(s)	918, 2010
Psp6I	CCWGG	4 cut(s)	1357, 1535, 1609, 2077
PspEI	GGTNACC	1 cut(s)	248
PspFI	CCCAGC	1 cut(s)	557
PspGI	CCWGG	4 cut(s)	1357, 1535, 1609, 2077
PspLI	CGTACG	1 cut(s)	188
PspN4I	GGNNCC	4 cut(s)	6, 649, 1748, 1813
PspPI	GGNCC	5 cut(s)	383, 807, 898, 1658, 2015
PspXI	VCTCGAGB	1 cut(s)	973
PsuI	RGATCY	2 cut(s)	4, 1461
PsyI	GACNNNGTC	1 cut(s)	626
PvuII	CAGCTG	1 cut(s)	1943
RsaI	GTAC	4 cut(s)	190, 575, 965, 1519
RsaNI	GTAC	4 cut(s)	189, 574, 964, 1518
RseI	CAYNNNNRTG	7 cut(s)	470, 595, 752, 1144, 1537, 1603, 1793
SapI	GCTCTTC	1 cut(s)	710
SaqAI	TTAA	6 cut(s)	179, 456, 918, 1169, 1782, 2010
SatI	GCNGC	5 cut(s)	12, 217, 510, 1077, 1944
Sau3AI	GATC	9 cut(s)	4, 150, 411, 434, 1084, 1326, 1461, 1570, 2044
Sau96I	GGNCC	5 cut(s)	383, 807, 898, 1658, 2015
SchI	GAGTC	4 cut(s)	578, 617, 854, 1245
ScrFI	CCNGG	8 cut(s)	381, 735, 1314, 1359, 1537, 1611, 1694, 2079
SduI	GDGCHC	3 cut(s)	722, 1320, 2069
SfaNI	GCATC	3 cut(s)	508, 811, 1942
SfiI	GGCCNNNNNGGCC	1 cut(s)	660
Sfr274I	CTCGAG	1 cut(s)	973
SinI	GGWCC	4 cut(s)	383, 807, 898, 2015
SlaI	CTCGAG	1 cut(s)	973
SmiMI	CAYNNNNRTG	7 cut(s)	470, 595, 752, 1144, 1537, 1603, 1793
SmlI	CTYRAG	1 cut(s)	973
SmoI	CTYRAG	1 cut(s)	973
SphI	GCATGC	1 cut(s)	499
Sse9I	AATT	9 cut(s)	44, 123, 344, 427, 536, 919, 1442, 1760, 1872
SseBI	AGGCCT	1 cut(s)	204
SsiI	CCGC	6 cut(s)	11, 174, 253, 487, 633, 1074
SspI	AATATT	1 cut(s)	57
SspMI	CTAG	5 cut(s)	200, 705, 1515, 1772, 1920
StuI	AGGCCT	1 cut(s)	204
StyD4I	CCNGG	8 cut(s)	379, 733, 1312, 1357, 1535, 1609, 1692, 2077
StyI	CCWWGG	4 cut(s)	664, 1033, 1226, 1598
TaaI	ACNGT	9 cut(s)	145, 700, 938, 944, 1110, 1143, 1555, 1867, 2006
TaiI	ACGT	1 cut(s)	194
TaqI	TCGA	4 cut(s)	858, 912, 974, 1897
TaqII	GACCGA	1 cut(s)	51
TasI	AATT	9 cut(s)	44, 123, 344, 427, 536, 919, 1442, 1760, 1872
TatI	WGTACW	1 cut(s)	963
TauI	GCSGC	1 cut(s)	14
Tru1I	TTAA	6 cut(s)	179, 456, 918, 1169, 1782, 2010
Tru9I	TTAA	6 cut(s)	179, 456, 918, 1169, 1782, 2010
TscAI	CASTG	5 cut(s)	871, 1148, 1509, 1558, 2047
TseFI	GTSAC	5 cut(s)	628, 1378, 1410, 1433, 1448
TseI	GCWGC	4 cut(s)	216, 509, 1076, 1943
Tsp45I	GTSAC	5 cut(s)	628, 1378, 1410, 1433, 1448
TspDTI	ATGAA	6 cut(s)	736, 763, 764, 1130, 1472, 1715
TspGWI	ACGGA	3 cut(s)	376, 616, 2043
TspRI	CASTG	5 cut(s)	871, 1148, 1509, 1558, 2047
Tth111I	GACNNNGTC	1 cut(s)	626
VpaK11BI	GGWCC	4 cut(s)	383, 807, 898, 2015
VspI	ATTAAT	2 cut(s)	918, 2010
XapI	RAATTY	3 cut(s)	427, 1760, 1872
XceI	RCATGY	8 cut(s)	407, 499, 757, 1022, 1309, 1411, 1608, 1798
XcmI	CCANNNNNNNNNTGG	1 cut(s)	597
XhoI	CTCGAG	1 cut(s)	973
XmnI	GAANNNNTTC	4 cut(s)	239, 479, 908, 1706
XspI	CTAG	5 cut(s)	200, 705, 1515, 1772, 1920
Zsp2I	ATGCAT	1 cut(s)	501

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.