Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0000850

Physical Location & Seq

Genomic Coordinates Reverse (-)

82525913 .. 82530303

Gene Structure 4391 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000036614

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

ATGACAGTCTCTGTCGAAGATCCAGACTCTCAAGCAACTATTCCTGGTGGGACAAGGATCGACGTCCTTGATGAAGAGTTCAACGACAGCCCAATTGAGCAGGTGAGGCTAACAGTTCCGATCACCGATGACCCTTCAGTTCCCGCCTTAACCTTTCGTACGTGGGTTCTAGGCCTTTTGTCATGCTGCACTCTTGCCTTTTTGAACCAGTTCTTTGGTTACCGCCAAAACCAGCTCTACATTTCTTCAGTCTCAGCACAAATCCTCGTCCTCCCTCTCGGAAAACTGATGGCTAAAACTCTCCCAACAAAACAATTCCGAGTTATGGGATGGACATTTTCGTTCAACCCCGGACCTTTCAACTTGAAAGAGCATGTGTTGATCACCATCTTTGCGAATTCAGGATCAAATAGTGTTTATGCAGTTGGCATTATCACTATTGTGAAGGCTTTCTACCGCAGAAGCATGCATCCTATGGCAGCCTTCTTGTTAGCCCAAAGCACTCAATTGCTTGGATATGGGTGGGCTGGGTTGTTCAGAAAGTACCTTGTTGATTCCCCATATATGTGGTGGCCTGACAATCTGGTTCAGGTCTCTCTTTTCAGGGCGCTTCATGAATGGGAAATGAGACCAAAGGGAGGCCGTACTAGGCTGCAGTACTTCAGCTTAGTATTTGTATGCAGCTTCGCTTACTATATTATTCCAAGTTTTTTCTTCCCCTCCATAGGCGCTCTCTCCTTTGTTTGTTGGATATGGAAGGACTCCGTCACCGCCCAACAGATTGGTTCCGGCCTCAATGGCCTTGGCATTGGCTCGTTTGGCCTTGATTGGTCAACTGTTGCTAGCTTCTTGAAGAGCCCATTAGCCACACCCGGTTTCGTCTTCATGAACATGTTGGCTGGTTTTGTCTTCATTTTCTACATTCTTACCCCCATTTTTTATTGGTCCAATGTAAAAGATGCCAAGAAGTTTCCCTTCTTTTCTTCTTCTACTTTCGACTCCACTGGCAAACGCTATAATGTTTCCCGAGTTCTGGACCAGAAAACTTTCGATATTAATTTGAAAGAGTATAACAGTTACAGTAAACTCCATCTCTCTATGTACTTTGCCTCGAGTTATGGGTGGAGCTTTGCTGGTCTGACAGCAACTATTTCACATGTTGCACTCTTCCATGGAAAAGACATCTGGGAAATGTGGAAAAAAACTTCTACCGCAACGAAAGATCAGCTTGGGGACATCCACACACGGTTGATGAAGAAGAACTACGAGGCAGTCCCACAATGGTGGTTTCACATCATGCTTGTTTTAATGGTTGGCCTTTCCATCTGGGTCTGTGAAGGTTTTGGGAAACAGCTCCAACTTCCATGGTGGGGAGTCTTACTGGCTTGTGCCATTGCACTAACTTTCACCTTACCCATTGGCATTATTCAAGCCACAACAAACATGCAACCGGGGCTCAATGTGATCACAGAGTTGGTTATTGGGTATCTTTATCCTGGGAAGCCTCTTGCCAATGTGACTTTCAAAACATATGGCTATATCAGCATGTCACAAGCACTCATGTTTCTCGGTGACTTCAAATTAGGTCACTATATGAAGATCCCTCCCAAGTCCATGTTTATTGCGCAGTTAGCTGGAACACTGGTCGCTTCAAGTACCTTTTTCAGCACATCCTGGTGGCTTCTCAACACTGTTGAGAACATCTGTGATCCATCAAAACTGCCAGAGGGAAGTCCATGGACATGTCCTAGTGATGAGGTCTTCTACAATGCCTCAATCATTTGGGGAGTTATAGGCCCTCTCAGAATGTTCACTAAGCATGGAAACTACCCGGAGATGAACTGGTTCTTCCTACTTGGTTTACTTGCACCTATACCAGTTTGGCTCCTAGCGCGCAAATTCCCCAAGCTAGAGTGGATTAAGCTCATAAACATGCCTGTCATCATTGGAACCACAGCAGTCATGCCACCAGCTAAAGCTGTCCACTACTTGATGTGGTTCACAGTTGGAATTTTCTTTAGCTTCTATGTTTATCGACAACACAGGGCATGGTGGGCTAGGCATAACTATATCCTATCAGCTGCTTTGGATGCCGGTGTGGCCTTCACGGCAGTTCTTGTGTATTTCACCCTTCAGAGTAATGGTATTAATGGTCCAAAATGGTGGGGTCAGGACAGTACTGATCATTGTCCATTGGCCAAGTGCCCCACAGCTCCAGGAGTAGTGGTCAAAGGGTGTCCAGTTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

750

Amino Acids

84.62

Weight (kDa)

9.16

Isoelectric Point (pI)

36.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	50 - 709	3.3e-163	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000850)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26590 AT5G55930
fragaria_vesca	FvH4_3g42570 FvH4_3g42651 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660
malus_domestica	MD03G1029800.v1.1 MD03G1029900.v1.1 MD03G1030000.v1.1 MD07G1217200.v1.1 MD11G1034800.v1.1 MD11G1035000.v1.1 MD11G1035100.v1.1
prunus_persica	Prupe.6G026000_v2.0.a1 Prupe.6G026100_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026300_v2.0.a1
pyrus_communis	pycom03g02480 pycom03g02500 pycom11g02890 pycom11g02900
rosa_chinensis	RchiOBHm_Chr5g0076291 RchiOBHm_Chr5g0076301 RchiOBHm_Chr5g0076311 RchiOBHm_Chr5g0076621 RchiOBHm_Chr5g0076671
rosa_laevigata	RLG00000036614 RLG00000036615 RLG00000036616 RLG00000036617
rosa_multiflora	Rmu_co8320621.1_g000001 Rmu_co8419599.1_g000001 Rmu_co8455339.1_g000001 Rmu_sc0005961.1_g000002 Rmu_sc0005961.1_g000003 Rmu_sc0013948.1_g000002 Rmu_sc0035770.1_g000001 Rmu_sc0040547.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005490 Rroxscaffold_1G00005550 Rroxscaffold_1G00005560 Rroxscaffold_1G00005570
rosa_rugosa	Rorug05G0446700.1 Rorug05G0447000 Rorug05G0447100 Rorug05G0447200 Rorug05G0447200 Rorug05G0447300
rosa_samantha	Rh5AG501900 Rh5AG502000 Rh5AG502100 Rh5BG523700 Rh5BG523800 Rh5BG523900 Rh5CG547400 Rh5CG547500 Rh5CG547600 Rh5DG535900 Rh5DG536000 Rh5DG536100 Rh7AG436800
rosa_wichuraiana	Rw0G015040 Rw0G015060 Rw5G046590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	91
AatII	GACGTC	1 cut(s)	66
Acc16I	TGCGCA	1 cut(s)	1626
Acc36I	ACCTGC	1 cut(s)	91
AccII	CGCG	1 cut(s)	1894
AciI	CCGC	5 cut(s)	144, 223, 457, 771, 1212
AclWI	GGATC	5 cut(s)	14, 65, 412, 1594, 1703
AcoI	YGGCCR	1 cut(s)	2196
AcsI	RAATTY	3 cut(s)	397, 1898, 2010
AcuI	CTGAAG	4 cut(s)	120, 231, 646, 2117
AcyI	GRCGYC	1 cut(s)	63
AfaI	GTAC	7 cut(s)	160, 545, 646, 659, 1103, 1657, 2179
AfiI	CCNNNNNNNGG	5 cut(s)	325, 638, 725, 1033, 1370
AflIII	ACRYGT	3 cut(s)	891, 1156, 1742
AjnI	CCWGG	4 cut(s)	43, 1495, 1673, 2215
AjuI	GAANNNNNNNTTGG	2 cut(s)	1505, 1537
AleI	CACNNNNGTG	2 cut(s)	440, 1282
Alw26I	GTCTC	4 cut(s)	13, 256, 598, 622
AlwI	GGATC	5 cut(s)	14, 65, 412, 1594, 1703
AlwNI	CAGNNNCTG	1 cut(s)	11
Ama87I	CYCGRG	2 cut(s)	1026, 1111
ApeKI	GCWGC	5 cut(s)	186, 479, 652, 681, 2081
ApoI	RAATTY	3 cut(s)	397, 1898, 2010
AseI	ATTAAT	2 cut(s)	1056, 2148
Asp700I	GAANNNNTTC	4 cut(s)	209, 449, 1046, 1844
AspLEI	GCGC	5 cut(s)	610, 731, 1627, 1894, 1896
AspS9I	GGNCC	5 cut(s)	353, 945, 1036, 1796, 2153
AsuC2I	CCSGG	4 cut(s)	351, 873, 1452, 1832
AsuHPI	GGTGA	7 cut(s)	115, 115, 376, 760, 1399, 1583, 2119
AsuNHI	GCTAGC	1 cut(s)	842
AvaI	CYCGRG	2 cut(s)	1026, 1111
AvaII	GGWCC	4 cut(s)	353, 945, 1036, 2153
BaeGI	GKGCMC	1 cut(s)	2207
BalI	TGGCCA	1 cut(s)	2198
BanII	GRGCYC	2 cut(s)	860, 1458
BarI	GAAGNNNNNNTAC	4 cut(s)	437, 469, 1247, 1279
BbsI	GAAGAC	3 cut(s)	874, 901, 1753
BbvI	GCAGC	5 cut(s)	173, 491, 639, 693, 2068
BccI	CCATC	6 cut(s)	283, 324, 395, 1098, 1331, 1720
BceAI	ACGGC	2 cut(s)	627, 2124
BciT130I	CCWGG	4 cut(s)	45, 1497, 1675, 2217
BclI	TGATCA	3 cut(s)	381, 1464, 2182
BcnI	CCSGG	4 cut(s)	351, 873, 1452, 1832
BcoDI	GTCTC	4 cut(s)	13, 256, 598, 622
BfaI	CTAG	7 cut(s)	170, 648, 843, 1749, 1889, 1910, 2058
BfmI	CTRYAG	1 cut(s)	653
BfoI	RGCGCY	2 cut(s)	611, 732
BfuAI	ACCTGC	1 cut(s)	91
BglI	GCCNNNNNGGC	3 cut(s)	798, 2099, 2108
BisI	GCNGC	5 cut(s)	187, 480, 653, 682, 2082
BlsI	GCNGC	5 cut(s)	188, 481, 654, 683, 2083
BmcAI	AGTACT	2 cut(s)	659, 2179
Bme1390I	CCNGG	8 cut(s)	45, 351, 873, 1452, 1497, 1675, 1832, 2217
Bme18I	GGWCC	4 cut(s)	353, 945, 1036, 2153
BmeT110I	CYCGRG	2 cut(s)	1026, 1111
BmgT120I	GGNCC	5 cut(s)	353, 945, 1036, 1796, 2153
BmiI	GGNNCC	3 cut(s)	787, 1886, 1951
BmrFI	CCNGG	8 cut(s)	45, 351, 873, 1452, 1497, 1675, 1832, 2217
BmsI	GCATC	3 cut(s)	478, 949, 2080
BmtI	GCTAGC	1 cut(s)	846
BpiI	GAAGAC	3 cut(s)	874, 901, 1753
BpmI	CTGGAG	1 cut(s)	2199
BpuEI	CTTGAG	1 cut(s)	15
BpuMI	CCSGG	4 cut(s)	351, 873, 1452, 1832
BsaAI	YACGTR	1 cut(s)	162
BsaBI	GATNNNNATC	1 cut(s)	386
BsaHI	GRCGYC	1 cut(s)	63
BsaI	GGTCTC	2 cut(s)	598, 622
BsaJI	CCNNGG	7 cut(s)	349, 802, 1171, 1364, 1451, 1496, 1736
BsaXI	ACNNNNNCTCC	2 cut(s)	2211, 2241
Bsc4I	CCNNNNNNNGG	5 cut(s)	325, 638, 725, 1033, 1370
Bse118I	RCCGGY	1 cut(s)	2093
Bse1I	ACTGG	7 cut(s)	208, 1009, 1386, 1647, 1847, 1877, 2240
Bse3DI	GCAATG	1 cut(s)	1392
Bse8I	GATNNNNATC	1 cut(s)	386
BseBI	CCWGG	4 cut(s)	45, 1497, 1675, 2217
BseDI	CCNNGG	7 cut(s)	349, 802, 1171, 1364, 1451, 1496, 1736
BseGI	GGATG	5 cut(s)	335, 469, 1236, 1670, 2095
BseJI	GATNNNNATC	1 cut(s)	386
BseLI	CCNNNNNNNGG	5 cut(s)	325, 638, 725, 1033, 1370
BseMI	GCAATG	1 cut(s)	1392
BseMII	CTCAG	2 cut(s)	267, 1816
BseNI	ACTGG	7 cut(s)	208, 1009, 1386, 1647, 1847, 1877, 2240
BsePI	GCGCGC	1 cut(s)	1892
BseSI	GKGCMC	1 cut(s)	2207
BseXI	GCAGC	5 cut(s)	173, 491, 639, 693, 2068
BseYI	CCCAGC	1 cut(s)	527
BsgI	GTGCAG	1 cut(s)	172
Bsh1236I	CGCG	1 cut(s)	1894
BsiHKCI	CYCGRG	2 cut(s)	1026, 1111
BsiSI	CCGG	6 cut(s)	351, 789, 873, 1451, 1832, 2094
BsiWI	CGTACG	1 cut(s)	158
BslFI	GGGAC	3 cut(s)	64, 1247, 1259
BslI	CCNNNNNNNGG	5 cut(s)	325, 638, 725, 1033, 1370
BsmAI	GTCTC	4 cut(s)	13, 256, 598, 622
BsmFI	GGGAC	3 cut(s)	64, 1247, 1259
Bso31I	GGTCTC	2 cut(s)	598, 622
BsoBI	CYCGRG	2 cut(s)	1026, 1111
Bsp1286I	GDGCHC	3 cut(s)	860, 1458, 2207
Bsp19I	CCATGG	3 cut(s)	1171, 1364, 1736
BspACI	CCGC	5 cut(s)	144, 223, 457, 771, 1212
BspCNI	CTCAG	2 cut(s)	266, 1815
BspFNI	CGCG	1 cut(s)	1894
BspHI	TCATGA	2 cut(s)	613, 885
BspLI	GGNNCC	3 cut(s)	787, 1886, 1951
BspMAI	CTGCAG	1 cut(s)	657
BspMI	ACCTGC	1 cut(s)	91
BspOI	GCTAGC	1 cut(s)	846
BspPI	GGATC	5 cut(s)	14, 65, 412, 1594, 1703
BspQI	GCTCTTC	1 cut(s)	848
BspTNI	GGTCTC	2 cut(s)	598, 622
BsrDI	GCAATG	1 cut(s)	1392
BsrFI	RCCGGY	1 cut(s)	2093
BsrI	ACTGG	7 cut(s)	208, 1009, 1386, 1647, 1847, 1877, 2240
BssAI	RCCGGY	1 cut(s)	2093
BssECI	CCNNGG	7 cut(s)	349, 802, 1171, 1364, 1451, 1496, 1736
BssHII	GCGCGC	1 cut(s)	1892
BssNI	GRCGYC	1 cut(s)	63
BssT1I	CCWWGG	4 cut(s)	802, 1171, 1364, 1736
Bst2UI	CCWGG	4 cut(s)	45, 1497, 1675, 2217
Bst4CI	ACNGT	9 cut(s)	7, 115, 838, 1076, 1082, 1248, 1693, 2005, 2177
Bst6I	CTCTTC	3 cut(s)	69, 848, 1172
BstACI	GRCGYC	1 cut(s)	63
BstBAI	YACGTR	1 cut(s)	162
BstC8I	GCNNGC	3 cut(s)	467, 844, 1894
BstDEI	CTNAG	4 cut(s)	253, 667, 1802, 1815
BstDSI	CCRYGG	3 cut(s)	1171, 1364, 1736
BstEII	GGTNACC	1 cut(s)	218
BstF5I	GGATG	5 cut(s)	335, 469, 1236, 1670, 2095
BstFNI	CGCG	1 cut(s)	1894
BstH2I	RGCGCY	2 cut(s)	611, 732
BstHHI	GCGC	5 cut(s)	610, 731, 1627, 1894, 1896
BstMAI	GTCTC	4 cut(s)	13, 256, 598, 622
BstNI	CCWGG	4 cut(s)	45, 1497, 1675, 2217
BstNSI	RCATGY	8 cut(s)	377, 469, 895, 1160, 1447, 1549, 1746, 1936
BstPI	GGTNACC	1 cut(s)	218
BstSCI	CCNGG	8 cut(s)	43, 349, 871, 1450, 1495, 1673, 1830, 2215
BstSFI	CTRYAG	1 cut(s)	653
BstSLI	GKGCMC	1 cut(s)	2207
BstUI	CGCG	1 cut(s)	1894
BstV1I	GCAGC	5 cut(s)	173, 491, 639, 693, 2068
BstV2I	GAAGAC	3 cut(s)	874, 901, 1753
BstX2I	RGATCY	2 cut(s)	19, 1599
BstXI	CCANNNNNNTGG	5 cut(s)	215, 567, 782, 1284, 2163
BstYI	RGATCY	2 cut(s)	19, 1599
BtgI	CCRYGG	3 cut(s)	1171, 1364, 1736
BtsCI	GGATG	5 cut(s)	335, 469, 1236, 1670, 2095
BtsIMutI	CAGTG	3 cut(s)	1002, 1640, 1689
BveI	ACCTGC	1 cut(s)	91
Cac8I	GCNNGC	3 cut(s)	467, 844, 1894
CaiI	CAGNNNCTG	1 cut(s)	11
CciI	TCATGA	2 cut(s)	613, 885
CfoI	GCGC	5 cut(s)	610, 731, 1627, 1894, 1896
Cfr10I	RCCGGY	1 cut(s)	2093
Cfr13I	GGNCC	5 cut(s)	353, 945, 1036, 1796, 2153
Csp6I	GTAC	7 cut(s)	159, 544, 645, 658, 1102, 1656, 2178
CviQI	GTAC	7 cut(s)	159, 544, 645, 658, 1102, 1656, 2178
DdeI	CTNAG	4 cut(s)	253, 667, 1802, 1815
EaeI	YGGCCR	1 cut(s)	2196
Eam1104I	CTCTTC	3 cut(s)	69, 848, 1172
EarI	CTCTTC	3 cut(s)	69, 848, 1172
Eco130I	CCWWGG	4 cut(s)	802, 1171, 1364, 1736
Eco147I	AGGCCT	1 cut(s)	174
Eco24I	GRGCYC	2 cut(s)	860, 1458
Eco31I	GGTCTC	2 cut(s)	598, 622
Eco47I	GGWCC	4 cut(s)	353, 945, 1036, 2153
Eco57I	CTGAAG	4 cut(s)	120, 231, 646, 2117
Eco88I	CYCGRG	2 cut(s)	1026, 1111
Eco91I	GGTNACC	1 cut(s)	218
EcoO109I	RGGNCCY	1 cut(s)	1796
EcoO65I	GGTNACC	1 cut(s)	218
EcoRI	GAATTC	1 cut(s)	397
EcoRII	CCWGG	4 cut(s)	43, 1495, 1673, 2215
EcoT14I	CCWWGG	4 cut(s)	802, 1171, 1364, 1736
EcoT22I	ATGCAT	1 cut(s)	471
EcoT38I	GRGCYC	2 cut(s)	860, 1458
ErhI	CCWWGG	4 cut(s)	802, 1171, 1364, 1736
FalI	AAGNNNNNCTT	4 cut(s)	959, 991, 1212, 1244
FaqI	GGGAC	3 cut(s)	64, 1247, 1259
FauI	CCCGC	1 cut(s)	151
FauNDI	CATATG	1 cut(s)	1531
FbaI	TGATCA	3 cut(s)	381, 1464, 2182
Fnu4HI	GCNGC	5 cut(s)	187, 480, 653, 682, 2082
FokI	GGATG	5 cut(s)	342, 456, 1223, 1657, 2102
FriOI	GRGCYC	2 cut(s)	860, 1458
Fsp4HI	GCNGC	5 cut(s)	187, 480, 653, 682, 2082
FspBI	CTAG	7 cut(s)	170, 648, 843, 1749, 1889, 1910, 2058
FspI	TGCGCA	1 cut(s)	1626
GlaI	GCGC	5 cut(s)	609, 730, 1626, 1893, 1895
GluI	GCNGC	5 cut(s)	187, 480, 653, 682, 2082
GsaI	CCCAGC	1 cut(s)	531
GsuI	CTGGAG	1 cut(s)	2199
HaeII	RGCGCY	2 cut(s)	611, 732
HapII	CCGG	6 cut(s)	351, 789, 873, 1451, 1832, 2094
HhaI	GCGC	5 cut(s)	610, 731, 1627, 1894, 1896
Hin1I	GRCGYC	1 cut(s)	63
Hin6I	GCGC	5 cut(s)	608, 729, 1625, 1892, 1894
HinP1I	GCGC	5 cut(s)	608, 729, 1625, 1892, 1894
HincII	GTYRAC	1 cut(s)	834
HindII	GTYRAC	1 cut(s)	834
HinfI	GANTC	5 cut(s)	26, 554, 761, 998, 1374
HpaII	CCGG	6 cut(s)	351, 789, 873, 1451, 1832, 2094
HphI	GGTGA	7 cut(s)	115, 115, 376, 760, 1399, 1583, 2119
Hpy166II	GTNNAC	6 cut(s)	834, 1085, 1812, 1862, 1984, 2001
Hpy188I	TCNGA	7 cut(s)	120, 281, 320, 539, 1140, 1805, 2136
Hpy188III	TCNNGA	8 cut(s)	23, 402, 614, 850, 886, 1026, 1034, 2171
Hpy8I	GTNNAC	6 cut(s)	834, 1085, 1812, 1862, 1984, 2001
Hpy99I	CGWCG	1 cut(s)	65
HpyAV	CCTTC	8 cut(s)	144, 439, 493, 751, 985, 1331, 2113, 2141
HpyCH4III	ACNGT	9 cut(s)	7, 115, 838, 1076, 1082, 1248, 1693, 2005, 2177
HpyCH4IV	ACGT	2 cut(s)	63, 161
HpyCH4V	TGCA	9 cut(s)	189, 422, 469, 655, 681, 1163, 1397, 1447, 1868
HpyF3I	CTNAG	4 cut(s)	253, 667, 1802, 1815
HpySE526I	ACGT	2 cut(s)	63, 161
Hsp92I	GRCGYC	1 cut(s)	63
HspAI	GCGC	5 cut(s)	608, 729, 1625, 1892, 1894
Ksp22I	TGATCA	3 cut(s)	381, 1464, 2182
LguI	GCTCTTC	1 cut(s)	848
LmnI	GCTCC	4 cut(s)	1125, 1359, 1890, 2218
Lsp1109I	GCAGC	5 cut(s)	173, 491, 639, 693, 2068
LweI	GCATC	3 cut(s)	478, 949, 2080
MaeI	CTAG	7 cut(s)	170, 648, 843, 1749, 1889, 1910, 2058
MaeII	ACGT	2 cut(s)	63, 161
MaeIII	GTNAC	7 cut(s)	218, 766, 1076, 1516, 1548, 1571, 1586
MfeI	CAATTG	2 cut(s)	93, 506
MflI	RGATCY	2 cut(s)	19, 1599
MhlI	GDGCHC	3 cut(s)	860, 1458, 2207
MlsI	TGGCCA	1 cut(s)	2198
MluCI	AATT	8 cut(s)	93, 314, 397, 506, 1057, 1580, 1898, 2010
MluNI	TGGCCA	1 cut(s)	2198
MlyI	GAGTC	4 cut(s)	20, 755, 992, 1383
MmeI	TCCRAC	3 cut(s)	728, 1381, 1987
Mox20I	TGGCCA	1 cut(s)	2198
Mph1103I	ATGCAT	1 cut(s)	471
MroXI	GAANNNNTTC	4 cut(s)	209, 449, 1046, 1844
MscI	TGGCCA	1 cut(s)	2198
MseI	TTAA	5 cut(s)	149, 1056, 1307, 1920, 2148
MslI	CAYNNNNRTG	7 cut(s)	440, 565, 890, 1282, 1675, 1741, 1931
Msp20I	TGGCCA	1 cut(s)	2198
MspA1I	CMGCKG	1 cut(s)	2081
MspI	CCGG	6 cut(s)	351, 789, 873, 1451, 1832, 2094
MspR9I	CCNGG	8 cut(s)	45, 351, 873, 1452, 1497, 1675, 1832, 2217
MunI	CAATTG	2 cut(s)	93, 506
MvaI	CCWGG	4 cut(s)	45, 1497, 1675, 2217
MvnI	CGCG	1 cut(s)	1894
NciI	CCSGG	4 cut(s)	351, 873, 1452, 1832
NcoI	CCATGG	3 cut(s)	1171, 1364, 1736
NdeI	CATATG	1 cut(s)	1531
NheI	GCTAGC	1 cut(s)	842
NlaIV	GGNNCC	3 cut(s)	787, 1886, 1951
NmuCI	GTSAC	5 cut(s)	766, 1516, 1548, 1571, 1586
NsbI	TGCGCA	1 cut(s)	1626
NsiI	ATGCAT	1 cut(s)	471
NspI	RCATGY	8 cut(s)	377, 469, 895, 1160, 1447, 1549, 1746, 1936
OliI	CACNNNNGTG	2 cut(s)	440, 1282
PaeI	GCATGC	1 cut(s)	469
PaeR7I	CTCGAG	1 cut(s)	1111
PagI	TCATGA	2 cut(s)	613, 885
PaqCI	CACCTGC	1 cut(s)	91
PauI	GCGCGC	1 cut(s)	1892
PceI	AGGCCT	1 cut(s)	174
PciI	ACATGT	3 cut(s)	891, 1156, 1742
PciSI	GCTCTTC	1 cut(s)	848
PdmI	GAANNNNTTC	4 cut(s)	209, 449, 1046, 1844
PfeI	GAWTC	1 cut(s)	554
Pfl23II	CGTACG	1 cut(s)	158
PflFI	GACNNNGTC	1 cut(s)	764
PfoI	TCCNGGA	1 cut(s)	2215
PkrI	GCNGC	5 cut(s)	188, 481, 654, 683, 2083
PleI	GAGTC	4 cut(s)	20, 755, 992, 1382
PpsI	GAGTC	4 cut(s)	20, 755, 992, 1382
Ppu21I	YACGTR	1 cut(s)	162
PscI	ACATGT	3 cut(s)	891, 1156, 1742
PshBI	ATTAAT	2 cut(s)	1056, 2148
Psp6I	CCWGG	4 cut(s)	43, 1495, 1673, 2215
PspEI	GGTNACC	1 cut(s)	218
PspFI	CCCAGC	1 cut(s)	527
PspGI	CCWGG	4 cut(s)	43, 1495, 1673, 2215
PspLI	CGTACG	1 cut(s)	158
PspN4I	GGNNCC	3 cut(s)	787, 1886, 1951
PspPI	GGNCC	5 cut(s)	353, 945, 1036, 1796, 2153
PspXI	VCTCGAGB	1 cut(s)	1111
PstI	CTGCAG	1 cut(s)	657
PstNI	CAGNNNCTG	1 cut(s)	11
PsuI	RGATCY	2 cut(s)	19, 1599
PsyI	GACNNNGTC	1 cut(s)	764
PteI	GCGCGC	1 cut(s)	1892
PvuII	CAGCTG	1 cut(s)	2081
RsaI	GTAC	7 cut(s)	160, 545, 646, 659, 1103, 1657, 2179
RsaNI	GTAC	7 cut(s)	159, 544, 645, 658, 1102, 1656, 2178
RseI	CAYNNNNRTG	7 cut(s)	440, 565, 890, 1282, 1675, 1741, 1931
SapI	GCTCTTC	1 cut(s)	848
SaqAI	TTAA	5 cut(s)	149, 1056, 1307, 1920, 2148
SatI	GCNGC	5 cut(s)	187, 480, 653, 682, 2082
Sau96I	GGNCC	5 cut(s)	353, 945, 1036, 1796, 2153
ScaI	AGTACT	2 cut(s)	659, 2179
SchI	GAGTC	4 cut(s)	20, 755, 992, 1383
ScrFI	CCNGG	8 cut(s)	45, 351, 873, 1452, 1497, 1675, 1832, 2217
SduI	GDGCHC	3 cut(s)	860, 1458, 2207
SfaNI	GCATC	3 cut(s)	478, 949, 2080
SfcI	CTRYAG	1 cut(s)	653
SfiI	GGCCNNNNNGGCC	1 cut(s)	798
Sfr274I	CTCGAG	1 cut(s)	1111
SinI	GGWCC	4 cut(s)	353, 945, 1036, 2153
SlaI	CTCGAG	1 cut(s)	1111
SmiMI	CAYNNNNRTG	7 cut(s)	440, 565, 890, 1282, 1675, 1741, 1931
SmlI	CTYRAG	2 cut(s)	30, 1111
SmoI	CTYRAG	2 cut(s)	30, 1111
SphI	GCATGC	1 cut(s)	469
Sse9I	AATT	8 cut(s)	93, 314, 397, 506, 1057, 1580, 1898, 2010
SseBI	AGGCCT	1 cut(s)	174
SsiI	CCGC	5 cut(s)	144, 223, 457, 771, 1212
SspMI	CTAG	7 cut(s)	170, 648, 843, 1749, 1889, 1910, 2058
StuI	AGGCCT	1 cut(s)	174
StyD4I	CCNGG	8 cut(s)	43, 349, 871, 1450, 1495, 1673, 1830, 2215
StyI	CCWWGG	4 cut(s)	802, 1171, 1364, 1736
TaaI	ACNGT	9 cut(s)	7, 115, 838, 1076, 1082, 1248, 1693, 2005, 2177
TaiI	ACGT	2 cut(s)	66, 164
TaqI	TCGA	6 cut(s)	15, 60, 996, 1050, 1112, 2035
TasI	AATT	8 cut(s)	93, 314, 397, 506, 1057, 1580, 1898, 2010
TatI	WGTACW	3 cut(s)	657, 1101, 2177
TfiI	GAWTC	1 cut(s)	554
Tru1I	TTAA	5 cut(s)	149, 1056, 1307, 1920, 2148
Tru9I	TTAA	5 cut(s)	149, 1056, 1307, 1920, 2148
TscAI	CASTG	3 cut(s)	1009, 1647, 1696
TseFI	GTSAC	5 cut(s)	766, 1516, 1548, 1571, 1586
TseI	GCWGC	5 cut(s)	186, 479, 652, 681, 2081
Tsp45I	GTSAC	5 cut(s)	766, 1516, 1548, 1571, 1586
TspDTI	ATGAA	9 cut(s)	87, 602, 630, 874, 901, 902, 1268, 1610, 1853
TspGWI	ACGGA	1 cut(s)	754
TspRI	CASTG	3 cut(s)	1009, 1647, 1696
Tth111I	GACNNNGTC	1 cut(s)	764
VpaK11BI	GGWCC	4 cut(s)	353, 945, 1036, 2153
VspI	ATTAAT	2 cut(s)	1056, 2148
XapI	RAATTY	3 cut(s)	397, 1898, 2010
XceI	RCATGY	8 cut(s)	377, 469, 895, 1160, 1447, 1549, 1746, 1936
XcmI	CCANNNNNNNNNTGG	1 cut(s)	567
XhoI	CTCGAG	1 cut(s)	1111
XmnI	GAANNNNTTC	4 cut(s)	209, 449, 1046, 1844
XspI	CTAG	7 cut(s)	170, 648, 843, 1749, 1889, 1910, 2058
ZraI	GACGTC	1 cut(s)	64
ZrmI	AGTACT	2 cut(s)	659, 2179
Zsp2I	ATGCAT	1 cut(s)	471

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.