Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000850

Physical Location & Seq

Genomic Coordinates Reverse (-)

81966380 .. 81969476

Gene Structure 3097 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ35098

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGCAGCCGACACCAAAGATTTGTTGTCATTGTGTTCATGTGGCAGATGATGAAGTGAATGACAACCCTATTGAGGAAGTCAGGCTCACTGTTCCGATCACCGATGACCCTTCTCAACCAACCTTGACATTTCGGACGTGGGTTCTGGGCATACTCTCATGCGCCATTCTTGCCTTTGTCAACAAGTTTTTCGCATACCGCCGAAACCCGCTCTCTGTGGGATCAGTCTCAGCACAAATTCTTGTCCTCCCTCTGGGGAAGTTGATGGCTGCAACCCTCCCAACTAATCAATTACGGGTCCCCTTTACAAAATGGACATTTTCGATGAATCCGGGGCCTTTCAATCTGAAAGAGCATGTGCTTATCACCATATTTGCCAGCTCTGGAGCAAGCGGTGTCTATGCTGTGCATATGATCACAATGGTTCTGGCTTTTTACAAAAGGAATCTGCATCCTGCATCAGCCTTCTTGTTAGCACAAACCACACAGATGCTTGGGTACGGATGGGCTGGCCTATTCAGAAGATACCTTGTTGACTCTCCTTACATGTGGTGGCCGTCAAATCTGGTTCAAGTCTCTCTATTCAGGGCATTGCATGAAAAGGAAAAGAGACCAAAGGGAGGCCGTACAAGGCTACAATTCTTCTTCTTGGTTTTCATATGCAGCTTTGCTTACTACATTGTTCCGGCTTACCTTTTCCCCTCCATATCTACTATCTCCATTGTTTGTTTGATATGGAAGAATTCCATAACTGCCCAACAGATTGGTTCCGGAGTCCGTGGACTTGGTATTGGCTCGTTTGGACTCGATTGGTCTACTGTTGCTAGTTTCTTAGGCAGTCCATTGGCTACACCAGGATTTGCCAACATTAACTTCTTACTTGGTTTTGTTCTGATTGTCTACATTGCTGCCCCCATTGCTTATTGGAACAATGCATATGGCTTTCAGAGGTTCCCACTTATTTCCTCTCATACTTTCGATGCGATGGGAAACACTTACAACATTTCCAGGATTCTAAATCAGAAAAGTTTCGACATTAATATGTCAGAATATAATAGCTACAGCAAAGTCCATCTCAGTACCTTCTTTGCCATCAATTATGGACTGAGCTTTGCCAGTCTCACCGCTACAATTTCACATGTTGCACTTTTCTATGGAAAAACAATCTGGCACATGTGGAGAAAGACAGCTAGTTCTGTGAAAGCTCAAGTTAATGACATCCACACAAGGCTGATGAAGAAGAATTATGAAGCAGTCCCTCAATGGTGGTTTCACGTCATCCTTGTCTCAATGATTGGTCTTTCCATCTTCACTTGTGAAGGTTTTGGCAAACAGCTCCAACTTCCATGGTGGGGAGTTTTAATGGCTTGTGGCATTGCATTGTTCTTCACCTTACCCATCGGCATTATTAATGCCACGACAAATACGGGAACTGGGATTAATGTGATTACAGAGATGGTTATCGGGTATATTTATCCAGGCAAGCCTCTTGCGAATGCGGCCTTCAAGACCTATGGCACTATCAGCATGTCACAAGCACTCTCGTTTCTTACTGACTTCAAATTGGGTCACTATATGAAGATCCCTCCAAAATCCATGTTTGTTGTCCAGTTAGCTGGAACACTAATTGCTTCTAGTGTCCAATTTGCCACATCTTGGTGGCTTCTCCACTCCATTGAGAACATCTGCGATGTCTCAAAGTTGCCGGATGGAAGTCCATGGACATGTCCCGACGATGATGTCTTCTACAATGCTTCAATCATATGGGGAGTTGTCGGCCCGCTCAGAATGTTCGCCAACAAAGGCATCTACCCGGAGTTGAACTGGTTCTTCCTCCTCGGTTTACTTGCGCCTGTTCCAGTCTGGTTCTTCTCCAAGAAATTCCCAAATCAAAAGTGGATTAGGCTCATAAACATGCCTATCATTATTGGAGCAGCTCAGGGTATTCCACCTGCTGGACCTGTCCACTACATTACATATGGAGCAGTTGCCATCTTCTTCAACTTCTATGTGTACAGTAAGTTCAAAGGCTGGTGGGCTAGGCATAACTACATCCTCTCAGCTGCTTTGGATGCTGGTGTGGCCTTCGCAGGAGTTCTCTTATATTTCGCACTTCAAAGTAAGGACATTATAGGGCCAAACTGGTGGGGCCTTGATAATAATGATCATTGCCCATTGGCCCGTTGCCCTACTGCACCAGGAGTAGTGGCCAAAGGGTGCCCAGTTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

743

Amino Acids

82.92

Weight (kDa)

9.34

Isoelectric Point (pI)

35.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	42 - 704	1.8e-164	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000850)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26590 AT5G55930
fragaria_vesca	FvH4_3g42570 FvH4_3g42651 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660
malus_domestica	MD03G1029800.v1.1 MD03G1029900.v1.1 MD03G1030000.v1.1 MD07G1217200.v1.1 MD11G1034800.v1.1 MD11G1035000.v1.1 MD11G1035100.v1.1
prunus_persica	Prupe.6G026000_v2.0.a1 Prupe.6G026100_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026300_v2.0.a1
pyrus_communis	pycom03g02480 pycom03g02500 pycom11g02890 pycom11g02900
rosa_chinensis	RchiOBHm_Chr5g0076291 RchiOBHm_Chr5g0076301 RchiOBHm_Chr5g0076311 RchiOBHm_Chr5g0076621 RchiOBHm_Chr5g0076671
rosa_laevigata	RLG00000036614 RLG00000036615 RLG00000036616 RLG00000036617
rosa_multiflora	Rmu_co8320621.1_g000001 Rmu_co8419599.1_g000001 Rmu_co8455339.1_g000001 Rmu_sc0005961.1_g000002 Rmu_sc0005961.1_g000003 Rmu_sc0013948.1_g000002 Rmu_sc0035770.1_g000001 Rmu_sc0040547.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005490 Rroxscaffold_1G00005550 Rroxscaffold_1G00005560 Rroxscaffold_1G00005570
rosa_rugosa	Rorug05G0446700.1 Rorug05G0447000 Rorug05G0447100 Rorug05G0447200 Rorug05G0447200 Rorug05G0447300
rosa_samantha	Rh5AG501900 Rh5AG502000 Rh5AG502100 Rh5BG523700 Rh5BG523800 Rh5BG523900 Rh5CG547400 Rh5CG547500 Rh5CG547600 Rh5DG535900 Rh5DG536000 Rh5DG536100 Rh7AG436800
rosa_wichuraiana	Rw0G015040 Rw0G015060 Rw5G046590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1960
AasI	GACNNNNNNGTC	1 cut(s)	1739
Acc36I	ACCTGC	1 cut(s)	1960
AccB1I	GGYRCC	1 cut(s)	2217
AccB7I	CCANNNNNTGG	2 cut(s)	1656, 1955
AccBSI	CCGCTC	2 cut(s)	211, 1783
AccI	GTMKAC	2 cut(s)	815, 900
AccIII	TCCGGA	1 cut(s)	770
AciI	CCGC	6 cut(s)	199, 209, 393, 1125, 1499, 1781
AclWI	GGATC	2 cut(s)	229, 1576
AcoI	YGGCCR	2 cut(s)	554, 2208
AcsI	RAATTY	3 cut(s)	237, 742, 1880
AfaI	GTAC	4 cut(s)	500, 628, 1081, 2015
AfiI	CCNNNNNNNGG	6 cut(s)	73, 253, 620, 1352, 1656, 1955
AflIII	ACRYGT	4 cut(s)	546, 1138, 1173, 1724
AgsI	TTSAA	9 cut(s)	343, 572, 1507, 1561, 1758, 1822, 2002, 2026, 2117
AjiI	CACGTC	2 cut(s)	138, 1276
AjnI	CCWGG	4 cut(s)	853, 1007, 1477, 2197
AjuI	GAANNNNNNNTTGG	2 cut(s)	857, 889
Alw26I	GTCTC	6 cut(s)	232, 580, 604, 1124, 1291, 1699
AlwI	GGATC	2 cut(s)	229, 1576
Aor13HI	TCCGGA	1 cut(s)	770
ApeKI	GCWGC	6 cut(s)	4, 269, 663, 908, 1934, 2063
ApoI	RAATTY	3 cut(s)	237, 742, 1880
AseI	ATTAAT	3 cut(s)	1038, 1410, 1440
Asp700I	GAANNNNTTC	2 cut(s)	1028, 1826
AspLEI	GCGC	2 cut(s)	164, 1852
AspS9I	GGNCC	7 cut(s)	298, 335, 1778, 1958, 2135, 2149, 2179
AsuC2I	CCSGG	2 cut(s)	333, 1814
AsuHPI	GGTGA	4 cut(s)	91, 358, 1114, 1381
AvaII	GGWCC	2 cut(s)	298, 1958
BaeGI	GKGCMC	1 cut(s)	2222
BalI	TGGCCA	1 cut(s)	2210
BanI	GGYRCC	1 cut(s)	2217
BbsI	GAAGAC	1 cut(s)	1735
BbvI	GCAGC	6 cut(s)	16, 256, 675, 895, 1946, 2050
BceAI	ACGGC	2 cut(s)	541, 609
BciT130I	CCWGG	4 cut(s)	855, 1009, 1479, 2199
BclI	TGATCA	2 cut(s)	414, 2164
BcnI	CCSGG	2 cut(s)	333, 1814
BcoDI	GTCTC	6 cut(s)	232, 580, 604, 1124, 1291, 1699
BfaI	CTAG	4 cut(s)	825, 1191, 1635, 2040
BfmI	CTRYAG	1 cut(s)	1060
BfuAI	ACCTGC	1 cut(s)	1960
BisI	GCNGC	7 cut(s)	5, 270, 664, 909, 1500, 1935, 2064
BlsI	GCNGC	7 cut(s)	6, 271, 665, 910, 1501, 1936, 2065
Bme1390I	CCNGG	6 cut(s)	333, 855, 1009, 1479, 1814, 2199
Bme18I	GGWCC	2 cut(s)	298, 1958
BmgBI	CACGTC	2 cut(s)	138, 1276
BmgT120I	GGNCC	7 cut(s)	298, 335, 1778, 1958, 2135, 2149, 2179
BmiI	GGNNCC	7 cut(s)	299, 300, 336, 769, 953, 2150, 2219
BmrFI	CCNGG	6 cut(s)	333, 855, 1009, 1479, 1814, 2199
BmrI	ACTGGG	2 cut(s)	1443, 2216
BmsI	GCATC	6 cut(s)	460, 467, 480, 970, 1815, 2062
BmuI	ACTGGG	2 cut(s)	1443, 2216
BpiI	GAAGAC	1 cut(s)	1735
BpmI	CTGGAG	1 cut(s)	405
Bpu10I	CCTNAGC	1 cut(s)	1938
BpuEI	CTTGAG	1 cut(s)	1191
BpuMI	CCSGG	2 cut(s)	333, 1814
BsaBI	GATNNNNATC	1 cut(s)	1460
BsaI	GGTCTC	1 cut(s)	604
BsaJI	CCNNGG	5 cut(s)	332, 778, 1346, 1718, 1837
BsaWI	WCCGGW	1 cut(s)	770
Bsc4I	CCNNNNNNNGG	6 cut(s)	73, 253, 620, 1352, 1656, 1955
Bse1I	ACTGG	7 cut(s)	1116, 1438, 1609, 1829, 1859, 2147, 2222
Bse3DI	GCAATG	5 cut(s)	590, 903, 915, 1374, 2167
Bse8I	GATNNNNATC	1 cut(s)	1460
BseAI	TCCGGA	1 cut(s)	770
BseBI	CCWGG	4 cut(s)	855, 1009, 1479, 2199
BseDI	CCNNGG	5 cut(s)	332, 778, 1346, 1718, 1837
BseGI	GGATG	7 cut(s)	451, 509, 1218, 1278, 1714, 2052, 2077
BseJI	GATNNNNATC	1 cut(s)	1460
BseLI	CCNNNNNNNGG	6 cut(s)	73, 253, 620, 1352, 1656, 1955
BseMI	GCAATG	5 cut(s)	590, 903, 915, 1374, 2167
BseMII	CTCAG	6 cut(s)	243, 1090, 1097, 1798, 1952, 2073
BseNI	ACTGG	7 cut(s)	1116, 1438, 1609, 1829, 1859, 2147, 2222
BseRI	GAGGAG	1 cut(s)	1826
BseSI	GKGCMC	1 cut(s)	2222
BseXI	GCAGC	6 cut(s)	16, 256, 675, 895, 1946, 2050
BsgI	GTGCAG	1 cut(s)	2178
BshNI	GGYRCC	1 cut(s)	2217
BsiSI	CCGG	5 cut(s)	332, 686, 771, 1706, 1814
BslFI	GGGAC	3 cut(s)	284, 1241, 1713
BslI	CCNNNNNNNGG	6 cut(s)	73, 253, 620, 1352, 1656, 1955
BsmAI	GTCTC	6 cut(s)	232, 580, 604, 1124, 1291, 1699
BsmFI	GGGAC	3 cut(s)	284, 1241, 1713
BsmI	GAATGC	1 cut(s)	1501
Bso31I	GGTCTC	1 cut(s)	604
Bsp1286I	GDGCHC	1 cut(s)	2222
Bsp13I	TCCGGA	1 cut(s)	770
Bsp1407I	TGTACA	1 cut(s)	2013
Bsp143I	GATC	5 cut(s)	96, 221, 414, 1581, 2164
Bsp19I	CCATGG	2 cut(s)	1346, 1718
BspACI	CCGC	6 cut(s)	199, 209, 393, 1125, 1499, 1781
BspCNI	CTCAG	6 cut(s)	242, 1089, 1098, 1797, 1951, 2072
BspEI	TCCGGA	1 cut(s)	770
BspLI	GGNNCC	7 cut(s)	299, 300, 336, 769, 953, 2150, 2219
BspMI	ACCTGC	1 cut(s)	1960
BspPI	GGATC	2 cut(s)	229, 1576
BspT107I	GGYRCC	1 cut(s)	2217
BspTNI	GGTCTC	1 cut(s)	604
BsrBI	CCGCTC	2 cut(s)	211, 1783
BsrDI	GCAATG	5 cut(s)	590, 903, 915, 1374, 2167
BsrGI	TGTACA	1 cut(s)	2013
BsrI	ACTGG	7 cut(s)	1116, 1438, 1609, 1829, 1859, 2147, 2222
BssECI	CCNNGG	5 cut(s)	332, 778, 1346, 1718, 1837
BssMI	GATC	5 cut(s)	96, 221, 414, 1581, 2164
BssT1I	CCWWGG	2 cut(s)	1346, 1718
Bst2UI	CCWGG	4 cut(s)	855, 1009, 1479, 2199
Bst4CI	ACNGT	3 cut(s)	91, 820, 2018
BstAUI	TGTACA	1 cut(s)	2013
BstC8I	GCNNGC	5 cut(s)	379, 391, 511, 1484, 1781
BstDEI	CTNAG	7 cut(s)	229, 832, 1076, 1106, 1784, 1938, 2059
BstDSI	CCRYGG	3 cut(s)	778, 1346, 1718
BstF5I	GGATG	7 cut(s)	451, 509, 1218, 1278, 1714, 2052, 2077
BstHHI	GCGC	2 cut(s)	164, 1852
BstKTI	GATC	5 cut(s)	99, 224, 417, 1584, 2167
BstMAI	GTCTC	6 cut(s)	232, 580, 604, 1124, 1291, 1699
BstMBI	GATC	5 cut(s)	96, 221, 414, 1581, 2164
BstMWI	GCNNNNNNNGC	6 cut(s)	170, 917, 1499, 1524, 2072, 2081
BstNI	CCWGG	4 cut(s)	855, 1009, 1479, 2199
BstNSI	RCATGY	7 cut(s)	359, 550, 1142, 1177, 1531, 1728, 1918
BstSCI	CCNGG	6 cut(s)	331, 853, 1007, 1477, 1812, 2197
BstSFI	CTRYAG	1 cut(s)	1060
BstSLI	GKGCMC	1 cut(s)	2222
BstV1I	GCAGC	6 cut(s)	16, 256, 675, 895, 1946, 2050
BstV2I	GAAGAC	1 cut(s)	1735
BstX2I	RGATCY	1 cut(s)	1581
BstXI	CCANNNNNNTGG	3 cut(s)	764, 1616, 2145
BstYI	RGATCY	1 cut(s)	1581
BtgI	CCRYGG	3 cut(s)	778, 1346, 1718
BtgZI	GCGATG	2 cut(s)	998, 1704
BtrI	CACGTC	2 cut(s)	138, 1276
BtsCI	GGATG	7 cut(s)	451, 509, 1218, 1278, 1714, 2052, 2077
BtsIMutI	CAGTG	1 cut(s)	87
BveI	ACCTGC	1 cut(s)	1960
Cac8I	GCNNGC	5 cut(s)	379, 391, 511, 1484, 1781
CfoI	GCGC	2 cut(s)	164, 1852
Cfr13I	GGNCC	7 cut(s)	298, 335, 1778, 1958, 2135, 2149, 2179
Csp6I	GTAC	4 cut(s)	499, 627, 1080, 2014
CviQI	GTAC	4 cut(s)	499, 627, 1080, 2014
DdeI	CTNAG	7 cut(s)	229, 832, 1076, 1106, 1784, 1938, 2059
DpnI	GATC	5 cut(s)	98, 223, 416, 1583, 2166
DpnII	GATC	5 cut(s)	96, 221, 414, 1581, 2164
DrdI	GACNNNNNNGTC	1 cut(s)	1739
DseDI	GACNNNNNNGTC	1 cut(s)	1739
EaeI	YGGCCR	2 cut(s)	554, 2208
Eco130I	CCWWGG	2 cut(s)	1346, 1718
Eco31I	GGTCTC	1 cut(s)	604
Eco47I	GGWCC	2 cut(s)	298, 1958
EcoO109I	RGGNCCY	3 cut(s)	298, 335, 2149
EcoRI	GAATTC	1 cut(s)	742
EcoRII	CCWGG	4 cut(s)	853, 1007, 1477, 2197
EcoT14I	CCWWGG	2 cut(s)	1346, 1718
EcoT22I	ATGCAT	1 cut(s)	937
ErhI	CCWWGG	2 cut(s)	1346, 1718
FaqI	GGGAC	3 cut(s)	284, 1241, 1713
FauI	CCCGC	2 cut(s)	216, 1788
FauNDI	CATATG	5 cut(s)	411, 659, 937, 1763, 1978
FbaI	TGATCA	2 cut(s)	414, 2164
FblI	GTMKAC	2 cut(s)	815, 900
Fnu4HI	GCNGC	7 cut(s)	5, 270, 664, 909, 1500, 1935, 2064
FokI	GGATG	7 cut(s)	438, 516, 1205, 1265, 1721, 2039, 2084
Fsp4HI	GCNGC	7 cut(s)	5, 270, 664, 909, 1500, 1935, 2064
FspBI	CTAG	4 cut(s)	825, 1191, 1635, 2040
GlaI	GCGC	2 cut(s)	163, 1851
GluI	GCNGC	7 cut(s)	5, 270, 664, 909, 1500, 1935, 2064
GsuI	CTGGAG	1 cut(s)	405
HapII	CCGG	5 cut(s)	332, 686, 771, 1706, 1814
HhaI	GCGC	2 cut(s)	164, 1852
Hin6I	GCGC	2 cut(s)	162, 1850
HinP1I	GCGC	2 cut(s)	162, 1850
HincII	GTYRAC	2 cut(s)	181, 535
HindII	GTYRAC	2 cut(s)	181, 535
HinfI	GANTC	6 cut(s)	328, 445, 536, 774, 804, 1012
HpaII	CCGG	5 cut(s)	332, 686, 771, 1706, 1814
HphI	GGTGA	4 cut(s)	91, 358, 1114, 1381
Hpy166II	GTNNAC	8 cut(s)	181, 535, 782, 816, 901, 1844, 1966, 2014
Hpy188I	TCNGA	9 cut(s)	96, 135, 348, 521, 894, 948, 1023, 1048, 1787
Hpy188III	TCNNGA	4 cut(s)	384, 771, 1507, 1730
Hpy8I	GTNNAC	8 cut(s)	181, 535, 782, 816, 901, 1844, 1966, 2014
Hpy99I	CGWCG	1 cut(s)	1736
HpyAV	CCTTC	6 cut(s)	120, 475, 1093, 1313, 1513, 2095
HpyCH4III	ACNGT	3 cut(s)	91, 820, 2018
HpyCH4IV	ACGT	2 cut(s)	137, 1275
HpyF10VI	GCNNNNNNNGC	6 cut(s)	170, 917, 1499, 1524, 2072, 2081
HpyF3I	CTNAG	7 cut(s)	229, 832, 1076, 1106, 1784, 1938, 2059
HpySE526I	ACGT	2 cut(s)	137, 1275
HspAI	GCGC	2 cut(s)	162, 1850
KflI	GGGWCCC	1 cut(s)	298
Kpn2I	TCCGGA	1 cut(s)	770
Ksp22I	TGATCA	2 cut(s)	414, 2164
Kzo9I	GATC	5 cut(s)	96, 221, 414, 1581, 2164
LmnI	GCTCC	4 cut(s)	386, 1341, 1931, 1982
Lsp1109I	GCAGC	6 cut(s)	16, 256, 675, 895, 1946, 2050
LweI	GCATC	6 cut(s)	460, 467, 480, 970, 1815, 2062
MaeI	CTAG	4 cut(s)	825, 1191, 1635, 2040
MaeII	ACGT	2 cut(s)	137, 1275
MaeIII	GTNAC	2 cut(s)	1530, 1568
MalI	GATC	5 cut(s)	98, 223, 416, 1583, 2166
MbiI	CCGCTC	2 cut(s)	211, 1783
MboI	GATC	5 cut(s)	96, 221, 414, 1581, 2164
MflI	RGATCY	1 cut(s)	1581
MhlI	GDGCHC	1 cut(s)	2222
MlsI	TGGCCA	1 cut(s)	2210
MluNI	TGGCCA	1 cut(s)	2210
MlyI	GAGTC	3 cut(s)	530, 783, 798
MmeI	TCCRAC	1 cut(s)	1363
Mox20I	TGGCCA	1 cut(s)	2210
Mph1103I	ATGCAT	1 cut(s)	937
MroI	TCCGGA	1 cut(s)	770
MroXI	GAANNNNTTC	2 cut(s)	1028, 1826
MscI	TGGCCA	1 cut(s)	2210
MseI	TTAA	6 cut(s)	870, 1038, 1212, 1361, 1410, 1440
MslI	CAYNNNNRTG	5 cut(s)	488, 1040, 1657, 1723, 1913
Msp20I	TGGCCA	1 cut(s)	2210
MspA1I	CMGCKG	1 cut(s)	2063
MspI	CCGG	5 cut(s)	332, 686, 771, 1706, 1814
MspR9I	CCNGG	6 cut(s)	333, 855, 1009, 1479, 1814, 2199
Mva1269I	GAATGC	1 cut(s)	1501
MvaI	CCWGG	4 cut(s)	855, 1009, 1479, 2199
MwoI	GCNNNNNNNGC	6 cut(s)	170, 917, 1499, 1524, 2072, 2081
NciI	CCSGG	2 cut(s)	333, 1814
NcoI	CCATGG	2 cut(s)	1346, 1718
NdeI	CATATG	5 cut(s)	411, 659, 937, 1763, 1978
NdeII	GATC	5 cut(s)	96, 221, 414, 1581, 2164
NlaIV	GGNNCC	7 cut(s)	299, 300, 336, 769, 953, 2150, 2219
NmuCI	GTSAC	2 cut(s)	1530, 1568
NsiI	ATGCAT	1 cut(s)	937
NspI	RCATGY	7 cut(s)	359, 550, 1142, 1177, 1531, 1728, 1918
PaqCI	CACCTGC	1 cut(s)	1960
PciI	ACATGT	4 cut(s)	546, 1138, 1173, 1724
PctI	GAATGC	1 cut(s)	1501
PdmI	GAANNNNTTC	2 cut(s)	1028, 1826
PfeI	GAWTC	3 cut(s)	328, 445, 1012
PflMI	CCANNNNNTGG	2 cut(s)	1656, 1955
PfoI	TCCNGGA	1 cut(s)	1007
PkrI	GCNGC	7 cut(s)	6, 271, 665, 910, 1501, 1936, 2065
PleI	GAGTC	3 cut(s)	530, 782, 798
PpsI	GAGTC	3 cut(s)	530, 782, 798
PpuMI	RGGWCCY	1 cut(s)	298
PscI	ACATGT	4 cut(s)	546, 1138, 1173, 1724
PshBI	ATTAAT	3 cut(s)	1038, 1410, 1440
Psp5II	RGGWCCY	1 cut(s)	298
Psp6I	CCWGG	4 cut(s)	853, 1007, 1477, 2197
PspGI	CCWGG	4 cut(s)	853, 1007, 1477, 2197
PspN4I	GGNNCC	7 cut(s)	299, 300, 336, 769, 953, 2150, 2219
PspPI	GGNCC	7 cut(s)	298, 335, 1778, 1958, 2135, 2149, 2179
PspPPI	RGGWCCY	1 cut(s)	298
PsrI	GAACNNNNNNTAC	2 cut(s)	2006, 2038
PsuI	RGATCY	1 cut(s)	1581
PvuII	CAGCTG	1 cut(s)	2063
RsaI	GTAC	4 cut(s)	500, 628, 1081, 2015
RsaNI	GTAC	4 cut(s)	499, 627, 1080, 2014
RseI	CAYNNNNRTG	5 cut(s)	488, 1040, 1657, 1723, 1913
SaqAI	TTAA	6 cut(s)	870, 1038, 1212, 1361, 1410, 1440
SatI	GCNGC	7 cut(s)	5, 270, 664, 909, 1500, 1935, 2064
Sau3AI	GATC	5 cut(s)	96, 221, 414, 1581, 2164
Sau96I	GGNCC	7 cut(s)	298, 335, 1778, 1958, 2135, 2149, 2179
SchI	GAGTC	3 cut(s)	530, 783, 798
ScrFI	CCNGG	6 cut(s)	333, 855, 1009, 1479, 1814, 2199
SduI	GDGCHC	1 cut(s)	2222
SfaNI	GCATC	6 cut(s)	460, 467, 480, 970, 1815, 2062
SfcI	CTRYAG	1 cut(s)	1060
SinI	GGWCC	2 cut(s)	298, 1958
SmiMI	CAYNNNNRTG	5 cut(s)	488, 1040, 1657, 1723, 1913
SmlI	CTYRAG	1 cut(s)	1206
SmoI	CTYRAG	1 cut(s)	1206
SsiI	CCGC	6 cut(s)	199, 209, 393, 1125, 1499, 1781
SspMI	CTAG	4 cut(s)	825, 1191, 1635, 2040
StyD4I	CCNGG	6 cut(s)	331, 853, 1007, 1477, 1812, 2197
StyI	CCWWGG	2 cut(s)	1346, 1718
TaaI	ACNGT	3 cut(s)	91, 820, 2018
TaiI	ACGT	2 cut(s)	140, 1278
TaqI	TCGA	4 cut(s)	323, 807, 978, 1032
TatI	WGTACW	1 cut(s)	2013
TauI	GCSGC	1 cut(s)	1502
TfiI	GAWTC	3 cut(s)	328, 445, 1012
Tru1I	TTAA	6 cut(s)	870, 1038, 1212, 1361, 1410, 1440
Tru9I	TTAA	6 cut(s)	870, 1038, 1212, 1361, 1410, 1440
TscAI	CASTG	1 cut(s)	94
TseFI	GTSAC	2 cut(s)	1530, 1568
TseI	GCWGC	6 cut(s)	4, 269, 663, 908, 1934, 2063
Tsp45I	GTSAC	2 cut(s)	1530, 1568
TspDTI	ATGAA	8 cut(s)	26, 66, 341, 612, 646, 1250, 1263, 1592
TspGWI	ACGGA	2 cut(s)	516, 767
TspRI	CASTG	1 cut(s)	94
Van91I	CCANNNNNTGG	2 cut(s)	1656, 1955
VpaK11BI	GGWCC	2 cut(s)	298, 1958
VspI	ATTAAT	3 cut(s)	1038, 1410, 1440
XapI	RAATTY	3 cut(s)	237, 742, 1880
XceI	RCATGY	7 cut(s)	359, 550, 1142, 1177, 1531, 1728, 1918
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1893
XmiI	GTMKAC	2 cut(s)	815, 900
XmnI	GAANNNNTTC	2 cut(s)	1028, 1826
XspI	CTAG	4 cut(s)	825, 1191, 1635, 2040
Zsp2I	ATGCAT	1 cut(s)	937

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.