Rh5CG547600

oligopeptide transporter

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Reverse (-)
76389313 .. 76396719
7407 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG547600.1

Sequence Viewer

Length: 1668 bp
ATGACAGGCTTGGTTGAGGATGGAGTTCCTTCAGGAAACCTCTCTGGGAGGCATCACTTTGACATTGATGTAAAGGATGAGGAAGTGAATGACAACCCTGTTGAGCAAGTGAGGTTAACTGTTTCAACCACCGATGACCCTTCTCAACCAACCTTGACATTTCGGACATGGGTTCTTGGCCTACTCTCATGCTCCATTCTTGCCTTTGTCAACCAGTTTTTTGGTTATCGCACCAACCAGCTCTATGTGTCATCAGTCTCGGCACAAATTCTTGTCCTCCCTCTGGGGAAGTTGATGGCTGCAACCCTCCCAACTTATCAATTACGAGTCCCCTTTACAAAATGGAAATTTTCAATGAATCCGGGGCCTTTCAATCTGAAAGAACATGTGCTGATCACCATATTTGCCAACTCTGGATCAAACAGTGTCTATGCTGTGAACATCATCACAATTGTTCTGGCTTTTTACAAAAGGAAACTGCATCCGGCATCAGCCTTCTTGTTAGCACAAACCACACAGATGCTTGGGTATGGATGGGCTGGCCTATTCAGAAGATACCTTGTTGACTCTCCTTACATGTGGTGGCCGTCAAATCTGGTTCAAGTCTCTCTATTCAGGGCATTGCATGAAAAGGAAAAGAGACCAAAAGGAGGCCGTACAAGGCTACAATTCTTCTTCTTGGTTTTCGTATGCAGCTTTGCTTACTACATTGTTCCGGCTTATCTATTCCCCTCCATATCTGCTTTCTCCATTGTTTGTTTGATATGGAAGAACTCCATTACTGCCCAACAGATTGGTTCCGGGGCCCATGGACTTGGCATTGGCTCATTTGGACTTGATTGGTCTACTGTTGCAGGTTTCTTAGGCAGTCCATTGGCTACACCCGGATTTGCCACCATTAACATCTTACTTGGTTTTGTGCTGATTGTCTACATTGTTACCCCCATTGCTTATTGGAACAATGCATATGGTGCTCATAAGTTCCCAATTATTTCCTCTCATACTTTTGATGCGATGGGCAACACCTACAACATTACCAGGATTCTAAATCAGAAAAACTTCAACATCGATATGTCTGAATATAACAGCTACAGCAAACTCCATCTCAGTACCTTCTTTGCCTTCACTTATGGACTGAGCTTCGCAACTCTCACTGCTACAATTTCACATGTTGCACTTTTCCATGGAAAAACAATCTGGCACATGTGGAGAATGACAGCTAGTGCTGTGAAAGATCAAGTTGGTGACATCCACACAAGGCTGATGAAGAAGAATTATGATGCAGTCCCTCAATGGTGGTTTCATTTCATCCTTGTCTCAATGGTGGGTCTTGCCATCTTTGCTTGTGAAGGTTTTGGCAAACAGCTCCAACTTCCATGGTGGGGAGTTTTAATGGCTTGTGGCATTGCACTGTTCTTCACCTTACCCATTGGCATCATTCAAGCCACAACAAATCAGCAACCTGGGCTTAATGTGATTACAGAGTTGGTTATCGGGTATATTTATCCGGGCAAGCCTCTTGCGAATGTGGCCTTCAAGACCTATGGCTATATCAGCATGTCACAAGCACTCATGTTTCTTGGTGACTTCAAATTGGGTCACTATATGAAGATCCCTCCAAAGTCCATGTTTATTGTCCAGGTTAGTTATAATAATAATATATCATAG

Protein Analysis

555

Amino Acids

62.22

Weight (kDa)

9.38

Isoelectric Point (pI)

33.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OPT PF03169 52 - 548 3.6e-132 OPT oligopeptide transporter protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1650
Acc36I ACCTGC 1 cut(s) 845
AccI GTMKAC 2 cut(s) 845, 930
AclWI GGATC 2 cut(s) 424, 1606
AcoI YGGCCR 1 cut(s) 584
AcsI RAATTY 2 cut(s) 267, 347
AcuI CTGAAG 1 cut(s) 15
AfaI GTAC 2 cut(s) 658, 1111
AfiI CCNNNNNNNGG 3 cut(s) 283, 650, 1382
AflIII ACRYGT 4 cut(s) 385, 576, 1168, 1203
AgsI TTSAA 8 cut(s) 126, 354, 373, 602, 1063, 1442, 1537, 1591
AjnI CCWGG 3 cut(s) 1037, 1462, 1638
AluBI AGCT 6 cut(s) 241, 696, 1089, 1140, 1220, 1366
AluI AGCT 6 cut(s) 241, 696, 1089, 1140, 1220, 1366
Alw21I GWGCWC 1 cut(s) 976
Alw26I GTCTC 4 cut(s) 262, 610, 634, 1321
AlwI GGATC 2 cut(s) 424, 1606
AoxI GGCC 7 cut(s) 178, 365, 541, 584, 652, 804, 1530
ApaI GGGCCC 1 cut(s) 808
ApeKI GCWGC 2 cut(s) 299, 693
ApoI RAATTY 2 cut(s) 267, 347
Asp700I GAANNNNTTC 1 cut(s) 1058
AspS9I GGNCC 3 cut(s) 365, 804, 805
AsuC2I CCSGG 4 cut(s) 363, 802, 885, 1509
AsuHPI GGTGA 4 cut(s) 388, 1256, 1411, 1595
BaeGI GKGCMC 1 cut(s) 808
BanII GRGCYC 1 cut(s) 808
Bbv12I GWGCWC 1 cut(s) 976
BbvI GCAGC 2 cut(s) 286, 705
BccI CCATC 6 cut(s) 14, 289, 528, 1009, 1110, 1343
BceAI ACGGC 2 cut(s) 571, 639
BciT130I CCWGG 3 cut(s) 1039, 1464, 1640
BclI TGATCA 1 cut(s) 393
BcnI CCSGG 4 cut(s) 363, 802, 885, 1509
BcoDI GTCTC 4 cut(s) 262, 610, 634, 1321
BfaI CTAG 1 cut(s) 1221
BfmI CTRYAG 1 cut(s) 1090
BfuAI ACCTGC 1 cut(s) 845
BisI GCNGC 2 cut(s) 300, 694
BlsI GCNGC 2 cut(s) 301, 695
Bme1390I CCNGG 7 cut(s) 363, 802, 885, 1039, 1464, 1509, 1640
BmgT120I GGNCC 3 cut(s) 365, 804, 805
BmiI GGNNCC 4 cut(s) 366, 799, 805, 806
BmrFI CCNGG 7 cut(s) 363, 802, 885, 1039, 1464, 1509, 1640
BmsI GCATC 7 cut(s) 61, 490, 497, 510, 1000, 1270, 1443
BpuMI CCSGG 4 cut(s) 363, 802, 885, 1509
Bsa29I ATCGAT 1 cut(s) 1068
BsaI GGTCTC 1 cut(s) 634
BsaJI CCNNGG 6 cut(s) 362, 801, 808, 1183, 1376, 1463
Bsc4I CCNNNNNNNGG 3 cut(s) 283, 650, 1382
Bse1I ACTGG 1 cut(s) 214
Bse3DI GCAATG 3 cut(s) 620, 945, 1404
BseBI CCWGG 3 cut(s) 1039, 1464, 1640
BseCI ATCGAT 1 cut(s) 1068
BseDI CCNNGG 6 cut(s) 362, 801, 808, 1183, 1376, 1463
BseGI GGATG 6 cut(s) 25, 82, 481, 539, 1248, 1308
BseLI CCNNNNNNNGG 3 cut(s) 283, 650, 1382
BseMI GCAATG 3 cut(s) 620, 945, 1404
BseMII CTCAG 2 cut(s) 1120, 1127
BseNI ACTGG 1 cut(s) 214
BseSI GKGCMC 1 cut(s) 808
BseXI GCAGC 2 cut(s) 286, 705
BshFI GGCC 7 cut(s) 180, 367, 543, 586, 654, 806, 1532
BshVI ATCGAT 1 cut(s) 1068
BsiHKAI GWGCWC 1 cut(s) 976
BsiSI CCGG 6 cut(s) 362, 485, 716, 801, 885, 1508
BslFI GGGAC 2 cut(s) 314, 1271
BslI CCNNNNNNNGG 3 cut(s) 283, 650, 1382
BsmAI GTCTC 4 cut(s) 262, 610, 634, 1321
BsmFI GGGAC 2 cut(s) 314, 1271
BsnI GGCC 7 cut(s) 180, 367, 543, 586, 654, 806, 1532
Bso31I GGTCTC 1 cut(s) 634
Bsp120I GGGCCC 1 cut(s) 804
Bsp1286I GDGCHC 2 cut(s) 808, 976
Bsp143I GATC 4 cut(s) 393, 416, 1234, 1611
Bsp19I CCATGG 3 cut(s) 808, 1183, 1376
BspANI GGCC 7 cut(s) 180, 367, 543, 586, 654, 806, 1532
BspCNI CTCAG 2 cut(s) 1119, 1128
BspDI ATCGAT 1 cut(s) 1068
BspLI GGNNCC 4 cut(s) 366, 799, 805, 806
BspMI ACCTGC 1 cut(s) 845
BspPI GGATC 2 cut(s) 424, 1606
BspTNI GGTCTC 1 cut(s) 634
BsrDI GCAATG 3 cut(s) 620, 945, 1404
BsrI ACTGG 1 cut(s) 214
BssECI CCNNGG 6 cut(s) 362, 801, 808, 1183, 1376, 1463
BssMI GATC 4 cut(s) 393, 416, 1234, 1611
BssT1I CCWWGG 3 cut(s) 808, 1183, 1376
Bst2UI CCWGG 3 cut(s) 1039, 1464, 1640
Bst4CI ACNGT 4 cut(s) 121, 425, 850, 1413
BstAPI GCANNNNNTGC 1 cut(s) 971
BstC8I GCNNGC 2 cut(s) 541, 1514
BstDEI CTNAG 3 cut(s) 862, 1106, 1136
BstDSI CCRYGG 3 cut(s) 808, 1183, 1376
BstF5I GGATG 6 cut(s) 25, 82, 481, 539, 1248, 1308
BstKTI GATC 4 cut(s) 396, 419, 1237, 1614
BstMAI GTCTC 4 cut(s) 262, 610, 634, 1321
BstMBI GATC 4 cut(s) 393, 416, 1234, 1611
BstMWI GCNNNNNNNGC 5 cut(s) 971, 1340, 1465, 1529, 1554
BstNI CCWGG 3 cut(s) 1039, 1464, 1640
BstNSI RCATGY 5 cut(s) 389, 580, 1172, 1207, 1561
BstSCI CCNGG 7 cut(s) 361, 800, 883, 1037, 1462, 1507, 1638
BstSFI CTRYAG 1 cut(s) 1090
BstSLI GKGCMC 1 cut(s) 808
BstV1I GCAGC 2 cut(s) 286, 705
BstX2I RGATCY 1 cut(s) 1611
BstXI CCANNNNNNTGG 3 cut(s) 221, 794, 815
BstYI RGATCY 1 cut(s) 1611
Bsu15I ATCGAT 1 cut(s) 1068
BsuRI GGCC 7 cut(s) 180, 367, 543, 586, 654, 806, 1532
BsuTUI ATCGAT 1 cut(s) 1068
BtgI CCRYGG 3 cut(s) 808, 1183, 1376
BtgZI GCGATG 1 cut(s) 1028
BtsCI GGATG 6 cut(s) 25, 82, 481, 539, 1248, 1308
BtsI GCAGTG 1 cut(s) 1152
BtsIMutI CAGTG 3 cut(s) 430, 1152, 1409
BveI ACCTGC 1 cut(s) 845
Cac8I GCNNGC 2 cut(s) 541, 1514
Cfr13I GGNCC 3 cut(s) 365, 804, 805
ClaI ATCGAT 1 cut(s) 1068
Csp6I GTAC 2 cut(s) 657, 1110
CviQI GTAC 2 cut(s) 657, 1110
DdeI CTNAG 3 cut(s) 862, 1106, 1136
DpnI GATC 4 cut(s) 395, 418, 1236, 1613
DpnII GATC 4 cut(s) 393, 416, 1234, 1611
EaeI YGGCCR 1 cut(s) 584
Eco130I CCWWGG 3 cut(s) 808, 1183, 1376
Eco24I GRGCYC 1 cut(s) 808
Eco31I GGTCTC 1 cut(s) 634
Eco57I CTGAAG 1 cut(s) 15
EcoO109I RGGNCCY 2 cut(s) 365, 804
EcoRII CCWGG 3 cut(s) 1037, 1462, 1638
EcoT14I CCWWGG 3 cut(s) 808, 1183, 1376
EcoT22I ATGCAT 1 cut(s) 967
EcoT38I GRGCYC 1 cut(s) 808
ErhI CCWWGG 3 cut(s) 808, 1183, 1376
FaqI GGGAC 2 cut(s) 314, 1271
FauNDI CATATG 1 cut(s) 967
FbaI TGATCA 1 cut(s) 393
FblI GTMKAC 2 cut(s) 845, 930
Fnu4HI GCNGC 2 cut(s) 300, 694
FokI GGATG 6 cut(s) 32, 89, 468, 546, 1235, 1295
FriOI GRGCYC 1 cut(s) 808
Fsp4HI GCNGC 2 cut(s) 300, 694
FspBI CTAG 1 cut(s) 1221
GluI GCNGC 2 cut(s) 300, 694
HaeIII GGCC 7 cut(s) 180, 367, 543, 586, 654, 806, 1532
HapII CCGG 6 cut(s) 362, 485, 716, 801, 885, 1508
HincII GTYRAC 3 cut(s) 117, 211, 565
HindII GTYRAC 3 cut(s) 117, 211, 565
HinfI GANTC 4 cut(s) 327, 358, 566, 1042
HpaI GTTAAC 1 cut(s) 117
HpaII CCGG 6 cut(s) 362, 485, 716, 801, 885, 1508
HphI GGTGA 4 cut(s) 388, 1256, 1411, 1595
Hpy166II GTNNAC 6 cut(s) 117, 211, 439, 565, 846, 931
Hpy188I TCNGA 5 cut(s) 165, 378, 551, 1053, 1078
Hpy188III TCNNGA 3 cut(s) 33, 414, 1537
Hpy8I GTNNAC 6 cut(s) 117, 211, 439, 565, 846, 931
HpyAV CCTTC 7 cut(s) 39, 150, 505, 1123, 1132, 1343, 1543
HpyCH4III ACNGT 4 cut(s) 121, 425, 850, 1413
HpyCH4V TGCA 9 cut(s) 302, 481, 625, 693, 854, 965, 1175, 1283, 1409
HpyF10VI GCNNNNNNNGC 5 cut(s) 971, 1340, 1465, 1529, 1554
HpyF3I CTNAG 3 cut(s) 862, 1106, 1136
Ksp22I TGATCA 1 cut(s) 393
KspAI GTTAAC 1 cut(s) 117
Kzo9I GATC 4 cut(s) 393, 416, 1234, 1611
LmnI GCTCC 2 cut(s) 197, 1371
Lsp1109I GCAGC 2 cut(s) 286, 705
LweI GCATC 7 cut(s) 61, 490, 497, 510, 1000, 1270, 1443
MaeI CTAG 1 cut(s) 1221
MaeIII GTNAC 5 cut(s) 937, 1244, 1560, 1583, 1598
MalI GATC 4 cut(s) 395, 418, 1236, 1613
MboI GATC 4 cut(s) 393, 416, 1234, 1611
MboII GAAGA 8 cut(s) 564, 664, 667, 781, 1279, 1282, 1408, 1621
MfeI CAATTG 1 cut(s) 450
MflI RGATCY 1 cut(s) 1611
MhlI GDGCHC 2 cut(s) 808, 976
MluCI AATT 9 cut(s) 267, 320, 347, 450, 668, 987, 1161, 1273, 1592
MlyI GAGTC 2 cut(s) 336, 560
MmeI TCCRAC 1 cut(s) 1393
Mph1103I ATGCAT 1 cut(s) 967
MroXI GAANNNNTTC 1 cut(s) 1058
MseI TTAA 4 cut(s) 116, 900, 1391, 1470
MslI CAYNNNNRTG 2 cut(s) 518, 1070
MspI CCGG 6 cut(s) 362, 485, 716, 801, 885, 1508
MspR9I CCNGG 7 cut(s) 363, 802, 885, 1039, 1464, 1509, 1640
MunI CAATTG 1 cut(s) 450
MvaI CCWGG 3 cut(s) 1039, 1464, 1640
MwoI GCNNNNNNNGC 5 cut(s) 971, 1340, 1465, 1529, 1554
NciI CCSGG 4 cut(s) 363, 802, 885, 1509
NcoI CCATGG 3 cut(s) 808, 1183, 1376
NdeI CATATG 1 cut(s) 967
NdeII GATC 4 cut(s) 393, 416, 1234, 1611
NlaIV GGNNCC 4 cut(s) 366, 799, 805, 806
NmeAIII GCCGAG 1 cut(s) 239
NmuCI GTSAC 4 cut(s) 1244, 1560, 1583, 1598
NsiI ATGCAT 1 cut(s) 967
NspI RCATGY 5 cut(s) 389, 580, 1172, 1207, 1561
PciI ACATGT 4 cut(s) 385, 576, 1168, 1203
PdmI GAANNNNTTC 1 cut(s) 1058
PfeI GAWTC 2 cut(s) 358, 1042
PkrI GCNGC 2 cut(s) 301, 695
PleI GAGTC 2 cut(s) 335, 560
PpsI GAGTC 2 cut(s) 335, 560
PscI ACATGT 4 cut(s) 385, 576, 1168, 1203
PsiI TTATAA 1 cut(s) 1650
Psp6I CCWGG 3 cut(s) 1037, 1462, 1638
PspGI CCWGG 3 cut(s) 1037, 1462, 1638
PspN4I GGNNCC 4 cut(s) 366, 799, 805, 806
PspOMI GGGCCC 1 cut(s) 804
PspPI GGNCC 3 cut(s) 365, 804, 805
PsuI RGATCY 1 cut(s) 1611
RsaI GTAC 2 cut(s) 658, 1111
RsaNI GTAC 2 cut(s) 657, 1110
RseI CAYNNNNRTG 2 cut(s) 518, 1070
SaqAI TTAA 4 cut(s) 116, 900, 1391, 1470
SatI GCNGC 2 cut(s) 300, 694
Sau3AI GATC 4 cut(s) 393, 416, 1234, 1611
Sau96I GGNCC 3 cut(s) 365, 804, 805
SchI GAGTC 2 cut(s) 336, 560
ScrFI CCNGG 7 cut(s) 363, 802, 885, 1039, 1464, 1509, 1640
SduI GDGCHC 2 cut(s) 808, 976
SfaNI GCATC 7 cut(s) 61, 490, 497, 510, 1000, 1270, 1443
SfcI CTRYAG 1 cut(s) 1090
SmiMI CAYNNNNRTG 2 cut(s) 518, 1070
Sse9I AATT 9 cut(s) 267, 320, 347, 450, 668, 987, 1161, 1273, 1592
SspMI CTAG 1 cut(s) 1221
StyD4I CCNGG 7 cut(s) 361, 800, 883, 1037, 1462, 1507, 1638
StyI CCWWGG 3 cut(s) 808, 1183, 1376
TaaI ACNGT 4 cut(s) 121, 425, 850, 1413
TaqI TCGA 1 cut(s) 1068
TasI AATT 9 cut(s) 267, 320, 347, 450, 668, 987, 1161, 1273, 1592
TfiI GAWTC 2 cut(s) 358, 1042
Tru1I TTAA 4 cut(s) 116, 900, 1391, 1470
Tru9I TTAA 4 cut(s) 116, 900, 1391, 1470
TscAI CASTG 3 cut(s) 430, 1159, 1416
TseFI GTSAC 4 cut(s) 1244, 1560, 1583, 1598
TseI GCWGC 2 cut(s) 299, 693
Tsp45I GTSAC 4 cut(s) 1244, 1560, 1583, 1598
TspDTI ATGAA 6 cut(s) 371, 642, 1280, 1292, 1297, 1622
TspRI CASTG 3 cut(s) 430, 1159, 1416
XapI RAATTY 2 cut(s) 267, 347
XceI RCATGY 5 cut(s) 389, 580, 1172, 1207, 1561
XmiI GTMKAC 2 cut(s) 845, 930
XmnI GAANNNNTTC 1 cut(s) 1058
XspI CTAG 1 cut(s) 1221
Zsp2I ATGCAT 1 cut(s) 967
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.