Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000850

Physical Location & Seq

Genomic Coordinates Forward (+)

3072214 .. 3077267

Gene Structure 5054 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1034800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2310 bp

ATGGTGGGCAGCTTCAATGGCTTCGATGGAGTATCTGAAGCAAAGTTGCCCGGCAAGCTTCAATCGGACATTGATGTCATCGGTGATGATGAAGTGAATGACAGCCCCATTGAGGAAGTTTGGCTAACTGTTCCAATAACCGACGACCCTTCACAGCCAACCTTGACATTTCGGACATGGGTTCTTGGGATTTTATCGTGCGTGATTCTTTCTTTTGTCAACGAATTCTTTGGGTTCCGAACGAATCAGCTGTCCGTTTCTTCAGTCTCCGCTCAGATTGTTGTCCTTCCTCTGGGAAAGTTGATGGCTGCGACCCTTCCAACCAGAAAATTCCGAGTCCCCTTCACAAAATGGTCGTTTACAATGAATCCAGGGCCTTTCAATCTGAAAGAACATGTGTTGATCACCATATTTGCAAACTCGGGAGCAGGCGGCGTTTATGCAGTACACATCATCACGATTGTCAAGGCCTTCTACCACAGGAAGCAGCATCCTGCAGCAGCCTTCTTGTTAGCACAGACTACTCAGGCAACAAGTCATTCTTTTGTTGTGAAATTTGAAATCTTTCAGATGCTTGGGTATGGATGGGCTGGCTTATTCAGAAAATACCTTGTTGACTCCCCTTACATGTGGTGGCCTGCAAATCTGGTTCAAGTTTCTCTCTTCAGGGCATTACATGAGAAGGAAAAGAGACCAAAGGGAGGTGTTACTAGACTGCAGTTCTTCCTCATGGTTTTCGTATGCAGCTTTGCTTACTACATTTTTCCCGGATTTCTCTTCCCCTCCATCTCTGCTTTCTCCATTGTTTGCTTGATATGGAAGAGCTCCATCACTGCTCAACAGATTGGTTCTGGCATGAATGGCCTTGGCATTGGCTCTTTTGGCTTCGATTGGTCCACCATTGCTGGCTTCTTGGGCAGCCCTTTAGCCACACCTGGGTTTGCCATTATCAACTTGTTAGTTGGTTTTGTCTCGATCCTCTACATTCTTACCCCCATTTCTTATTGGTCCAATGCATATGACGCTAAGAAGTTTCCAATCTTCACCTCTCATACTTTCGACTCGACGGGCCAGACCTATGATCTTTCCCGGGTTCTGAATCAAACAACTTTCGACATCGATCGTGAAGCGTATAACAATTACAGTAAACTCTATCTCAGTACCTTCTTTGCCTTCAGTTATGGCTTGAGCTTTGCCACTCTTACAGCTACTATTTCACATGTTGCCCTCTTCCATGGAAAATCAATTTGGCGTATGTGGAAGAAGACAACTAGTGTCGTGAAAGATCAAGTTGGCGACGTCCACACCCGGCTGATGAAAAAGAACTATGATTCTGTCCCTCAATGGTGGTTTCAACTCATCCTTGTTTTAATGGTTGGCCTTTCCATCTTTGCTTGTGAAGGTTTTGGAAAACAGCTCCAACTTCCATGGTGGGGAGTTTTAATGGCTTGTGGCATTGCCTTATTTTTCACCTTGCCCATCGGCATTATTCAAGCCACAACAAACCAGCAACCGGGGCTGAATGTGATCACGGAGCTCGTTATCGGGTATATTTACCCGGGGAAGCCTATTGCTAATGTGACATTTAAGACATATGGATACATCAGCATGGTACAAGCACTCACTTTTCTTGGTGACTTCAAATTAGGTCACTACATGAAGATCCCGCCTAAGTCAATGTTTATTGCACAGCTAGTGGGAACTATTGTGGCTTCAAGTGTATACTTTGGCACAGCATGGTGGCTTCTCGAATCCATCGAGCACATCTGCGATACATCAAGTTTGCCAGAGGGAAGTCCGTGGACATGCCCGGGAGATGATGTGTTCTACCATGCTTCGATCATATGGGGGGTCATAGGCCCACTCCGAATGTTTACCAGCTATGGAGTCTACAAGGAGATGAACCGGTTCTTCCTCATCGGCCTCCTTGCACCCGTTCCAGTTTGGTTCCTCTCAAAGAAATTCCCCAACCACCTGTGGATCAGGCTCATCAACATGCCCATAATCCTCGGTGCAACGGGCTCCATGCCGCCGGCTAAGGCCGTGCACTACATAACATGGTTTACAGTTGGTATTTTCTTCAGCTTCTATGTGTACAAAAGGCACAAGGGCTGGTGGGCTAGACATAACTATATTCTCTCTGCTTCTTTGGATGCTGGCCTTGCGTTCATGGGAGTTCTCATGTATTTCTCCCTTCAATCACAGGGGATCAATGGGCCTCAATGGTGGGGTCTTGAAGGCAGTGACCAGTGCCCGTTGGCCGAGTGTCCAACGGCGCCCGGGGTTGTTGCCAAAGGCTGCCCAGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

770

Amino Acids

85.98

Weight (kDa)

9.0

Isoelectric Point (pI)

38.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	55 - 731	5.1e-165	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000850)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26590 AT5G55930
fragaria_vesca	FvH4_3g42570 FvH4_3g42651 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660
malus_domestica	MD03G1029800.v1.1 MD03G1029900.v1.1 MD03G1030000.v1.1 MD07G1217200.v1.1 MD11G1034800.v1.1 MD11G1035000.v1.1 MD11G1035100.v1.1
prunus_persica	Prupe.6G026000_v2.0.a1 Prupe.6G026100_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026300_v2.0.a1
pyrus_communis	pycom03g02480 pycom03g02500 pycom11g02890 pycom11g02900
rosa_chinensis	RchiOBHm_Chr5g0076291 RchiOBHm_Chr5g0076301 RchiOBHm_Chr5g0076311 RchiOBHm_Chr5g0076621 RchiOBHm_Chr5g0076671
rosa_laevigata	RLG00000036614 RLG00000036615 RLG00000036616 RLG00000036617
rosa_multiflora	Rmu_co8320621.1_g000001 Rmu_co8419599.1_g000001 Rmu_co8455339.1_g000001 Rmu_sc0005961.1_g000002 Rmu_sc0005961.1_g000003 Rmu_sc0013948.1_g000002 Rmu_sc0035770.1_g000001 Rmu_sc0040547.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005490 Rroxscaffold_1G00005550 Rroxscaffold_1G00005560 Rroxscaffold_1G00005570
rosa_rugosa	Rorug05G0446700.1 Rorug05G0447000 Rorug05G0447100 Rorug05G0447200 Rorug05G0447200 Rorug05G0447300
rosa_samantha	Rh5AG501900 Rh5AG502000 Rh5AG502100 Rh5BG523700 Rh5BG523800 Rh5BG523900 Rh5CG547400 Rh5CG547500 Rh5CG547600 Rh5DG535900 Rh5DG536000 Rh5DG536100 Rh7AG436800
rosa_wichuraiana	Rw0G015040 Rw0G015060 Rw5G046590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	74
AatII	GACGTC	1 cut(s)	1302
AccB1I	GGYRCC	1 cut(s)	2275
AccBSI	CCGCTC	1 cut(s)	272
AccI	GTMKAC	2 cut(s)	1722, 1890
AciI	CCGC	4 cut(s)	270, 432, 1667, 2030
AclWI	GGATC	4 cut(s)	970, 1657, 1988, 2216
AcoI	YGGCCR	1 cut(s)	2259
AcsI	RAATTY	4 cut(s)	224, 329, 554, 1961
AcuI	CTGAAG	5 cut(s)	57, 246, 649, 1159, 2065
AcyI	GRCGYC	2 cut(s)	1299, 2276
AfaI	GTAC	4 cut(s)	447, 1162, 1614, 2096
AfiI	CCNNNNNNNGG	6 cut(s)	112, 292, 701, 936, 1433, 1513
AflIII	ACRYGT	3 cut(s)	394, 627, 1219
AgeI	ACCGGT	1 cut(s)	1905
AhlI	ACTAGT	1 cut(s)	1271
AjnI	CCWGG	2 cut(s)	370, 934
AjuI	GAANNNNNNNTTGG	2 cut(s)	1231, 1263
Alw21I	GWGCWC	4 cut(s)	827, 1539, 1764, 2049
Alw26I	GTCTC	3 cut(s)	271, 685, 976
Alw44I	GTGCAC	1 cut(s)	2045
AlwI	GGATC	4 cut(s)	970, 1657, 1988, 2216
Ama87I	CYCGRG	5 cut(s)	421, 1089, 1558, 1810, 2279
ApaLI	GTGCAC	1 cut(s)	2045
ApeKI	GCWGC	8 cut(s)	9, 308, 487, 497, 500, 744, 918, 2298
ApoI	RAATTY	4 cut(s)	224, 329, 554, 1961
ArsI	GACNNNNNNTTYG	2 cut(s)	236, 268
AsiGI	ACCGGT	1 cut(s)	1905
Asp700I	GAANNNNTTC	2 cut(s)	564, 1907
AspLEI	GCGC	1 cut(s)	2278
AspS9I	GGNCC	6 cut(s)	374, 894, 1008, 1069, 1859, 2216
AsuHPI	GGTGA	5 cut(s)	95, 397, 1036, 1462, 1646
AvaI	CYCGRG	5 cut(s)	421, 1089, 1558, 1810, 2279
AvaII	GGWCC	2 cut(s)	894, 1008
BaeGI	GKGCMC	2 cut(s)	2049, 2255
BanI	GGYRCC	1 cut(s)	2275
BanII	GRGCYC	3 cut(s)	827, 1539, 2024
BbsI	GAAGAC	1 cut(s)	1271
Bbv12I	GWGCWC	4 cut(s)	827, 1539, 1764, 2049
BbvI	GCAGC	8 cut(s)	21, 295, 499, 509, 512, 756, 930, 2285
BccI	CCATC	8 cut(s)	20, 298, 579, 794, 836, 1394, 1487, 1763
BceAI	ACGGC	2 cut(s)	2027, 2289
BciT130I	CCWGG	2 cut(s)	372, 936
BciVI	GTATCC	1 cut(s)	1592
BclI	TGATCA	2 cut(s)	402, 1527
BcoDI	GTCTC	3 cut(s)	271, 685, 976
BcuI	ACTAGT	1 cut(s)	1271
BfaI	CTAG	4 cut(s)	711, 1272, 1694, 2121
BfmI	CTRYAG	2 cut(s)	495, 716
BfoI	RGCGCY	1 cut(s)	2279
BfuI	GTATCC	1 cut(s)	1592
Bme18I	GGWCC	2 cut(s)	894, 1008
BmeT110I	CYCGRG	5 cut(s)	421, 1089, 1558, 1810, 2279
BmgT120I	GGNCC	6 cut(s)	374, 894, 1008, 1069, 1859, 2216
BmiI	GGNNCC	4 cut(s)	236, 1949, 2023, 2277
BmrI	ACTGGG	1 cut(s)	2297
BmsI	GCATC	3 cut(s)	499, 561, 2143
BmuI	ACTGGG	1 cut(s)	2297
BpiI	GAAGAC	1 cut(s)	1271
Bpu10I	CCTNAGC	1 cut(s)	2037
BpuEI	CTTGAG	1 cut(s)	1207
Bsa29I	ATCGAT	1 cut(s)	1119
BsaHI	GRCGYC	2 cut(s)	1299, 2276
BsaI	GGTCTC	1 cut(s)	685
BsaWI	WCCGGW	1 cut(s)	1905
BsaXI	ACNNNNNCTCC	2 cut(s)	1806, 1836
Bsc4I	CCNNNNNNNGG	6 cut(s)	112, 292, 701, 936, 1433, 1513
Bse118I	RCCGGY	2 cut(s)	1905, 2032
Bse1I	ACTGG	3 cut(s)	1940, 2248, 2303
Bse3DI	GCAATG	2 cut(s)	900, 1455
BseBI	CCWGG	2 cut(s)	372, 936
BseCI	ATCGAT	1 cut(s)	1119
BseGI	GGATG	4 cut(s)	490, 590, 1359, 2158
BseLI	CCNNNNNNNGG	6 cut(s)	112, 292, 701, 936, 1433, 1513
BseMI	GCAATG	2 cut(s)	900, 1455
BseMII	CTCAG	3 cut(s)	287, 539, 1171
BseNI	ACTGG	3 cut(s)	1940, 2248, 2303
BseSI	GKGCMC	2 cut(s)	2049, 2255
BseXI	GCAGC	8 cut(s)	21, 295, 499, 509, 512, 756, 930, 2285
Bsh1285I	CGRYCG	1 cut(s)	1123
BshNI	GGYRCC	1 cut(s)	2275
BshTI	ACCGGT	1 cut(s)	1905
BshVI	ATCGAT	1 cut(s)	1119
BsiEI	CGRYCG	1 cut(s)	1123
BsiHKAI	GWGCWC	4 cut(s)	827, 1539, 1764, 2049
BsiHKCI	CYCGRG	5 cut(s)	421, 1089, 1558, 1810, 2279
BslFI	GGGAC	2 cut(s)	323, 1322
BslI	CCNNNNNNNGG	6 cut(s)	112, 292, 701, 936, 1433, 1513
BsmAI	GTCTC	3 cut(s)	271, 685, 976
BsmFI	GGGAC	2 cut(s)	323, 1322
Bso31I	GGTCTC	1 cut(s)	685
BsoBI	CYCGRG	5 cut(s)	421, 1089, 1558, 1810, 2279
Bsp1286I	GDGCHC	6 cut(s)	827, 1539, 1764, 2024, 2049, 2255
Bsp1407I	TGTACA	1 cut(s)	2094
Bsp19I	CCATGG	2 cut(s)	1234, 1427
BspACI	CCGC	4 cut(s)	270, 432, 1667, 2030
BspCNI	CTCAG	3 cut(s)	286, 538, 1170
BspDI	ATCGAT	1 cut(s)	1119
BspLI	GGNNCC	4 cut(s)	236, 1949, 2023, 2277
BspMAI	CTGCAG	2 cut(s)	499, 720
BspPI	GGATC	4 cut(s)	970, 1657, 1988, 2216
BspQI	GCTCTTC	1 cut(s)	815
BspT107I	GGYRCC	1 cut(s)	2275
BspTNI	GGTCTC	1 cut(s)	685
BsrBI	CCGCTC	1 cut(s)	272
BsrDI	GCAATG	2 cut(s)	900, 1455
BsrFI	RCCGGY	2 cut(s)	1905, 2032
BsrGI	TGTACA	1 cut(s)	2094
BsrI	ACTGG	3 cut(s)	1940, 2248, 2303
BssAI	RCCGGY	2 cut(s)	1905, 2032
BssNAI	GTATAC	1 cut(s)	1723
BssNI	GRCGYC	2 cut(s)	1299, 2276
BssT1I	CCWWGG	3 cut(s)	865, 1234, 1427
Bst1107I	GTATAC	1 cut(s)	1723
Bst2UI	CCWGG	2 cut(s)	372, 936
Bst4CI	ACNGT	3 cut(s)	130, 1145, 2068
Bst6I	CTCTTC	4 cut(s)	668, 782, 815, 1235
BstACI	GRCGYC	2 cut(s)	1299, 2276
BstAUI	TGTACA	1 cut(s)	2094
BstC8I	GCNNGC	7 cut(s)	56, 430, 592, 639, 907, 2034, 2158
BstDEI	CTNAG	6 cut(s)	273, 525, 1026, 1157, 1671, 2037
BstDSI	CCRYGG	3 cut(s)	1234, 1427, 1799
BstF5I	GGATG	4 cut(s)	490, 590, 1359, 2158
BstH2I	RGCGCY	1 cut(s)	2279
BstHHI	GCGC	1 cut(s)	2278
BstMAI	GTCTC	3 cut(s)	271, 685, 976
BstMCI	CGRYCG	1 cut(s)	1123
BstMWI	GCNNNNNNNGC	8 cut(s)	18, 55, 861, 882, 915, 1022, 1516, 2162
BstNI	CCWGG	2 cut(s)	372, 936
BstNSI	RCATGY	5 cut(s)	398, 631, 1223, 1809, 1999
BstSFI	CTRYAG	2 cut(s)	495, 716
BstSLI	GKGCMC	2 cut(s)	2049, 2255
BstV1I	GCAGC	8 cut(s)	21, 295, 499, 509, 512, 756, 930, 2285
BstV2I	GAAGAC	1 cut(s)	1271
BstX2I	RGATCY	1 cut(s)	1662
BstYI	RGATCY	1 cut(s)	1662
BstZ17I	GTATAC	1 cut(s)	1723
Bsu15I	ATCGAT	1 cut(s)	1119
BsuI	GTATCC	1 cut(s)	1592
BsuTUI	ATCGAT	1 cut(s)	1119
BtgI	CCRYGG	3 cut(s)	1234, 1427, 1799
BtsCI	GGATG	4 cut(s)	490, 590, 1359, 2158
BtsI	GCAGTG	2 cut(s)	831, 2248
BtsIMutI	CAGTG	3 cut(s)	831, 2248, 2255
Cac8I	GCNNGC	7 cut(s)	56, 430, 592, 639, 907, 2034, 2158
CfoI	GCGC	1 cut(s)	2278
Cfr10I	RCCGGY	2 cut(s)	1905, 2032
Cfr13I	GGNCC	6 cut(s)	374, 894, 1008, 1069, 1859, 2216
Cfr9I	CCCGGG	4 cut(s)	1089, 1558, 1810, 2279
ClaI	ATCGAT	1 cut(s)	1119
CseI	GACGC	1 cut(s)	1031
Csp6I	GTAC	4 cut(s)	446, 1161, 1613, 2095
CspAI	ACCGGT	1 cut(s)	1905
CviQI	GTAC	4 cut(s)	446, 1161, 1613, 2095
DdeI	CTNAG	6 cut(s)	273, 525, 1026, 1157, 1671, 2037
DinI	GGCGCC	1 cut(s)	2277
DrdI	GACNNNNNNGTC	1 cut(s)	74
DseDI	GACNNNNNNGTC	1 cut(s)	74
EaeI	YGGCCR	1 cut(s)	2259
Eam1104I	CTCTTC	4 cut(s)	668, 782, 815, 1235
EarI	CTCTTC	4 cut(s)	668, 782, 815, 1235
Ecl136II	GAGCTC	2 cut(s)	825, 1537
Eco130I	CCWWGG	3 cut(s)	865, 1234, 1427
Eco147I	AGGCCT	1 cut(s)	470
Eco24I	GRGCYC	3 cut(s)	827, 1539, 2024
Eco31I	GGTCTC	1 cut(s)	685
Eco47I	GGWCC	2 cut(s)	894, 1008
Eco53kI	GAGCTC	2 cut(s)	825, 1537
Eco57I	CTGAAG	5 cut(s)	57, 246, 649, 1159, 2065
Eco88I	CYCGRG	5 cut(s)	421, 1089, 1558, 1810, 2279
EcoICRI	GAGCTC	2 cut(s)	825, 1537
EcoO109I	RGGNCCY	1 cut(s)	374
EcoRI	GAATTC	1 cut(s)	224
EcoRII	CCWGG	2 cut(s)	370, 934
EcoT14I	CCWWGG	3 cut(s)	865, 1234, 1427
EcoT22I	ATGCAT	1 cut(s)	1018
EcoT38I	GRGCYC	3 cut(s)	827, 1539, 2024
EgeI	GGCGCC	1 cut(s)	2277
EheI	GGCGCC	1 cut(s)	2277
ErhI	CCWWGG	3 cut(s)	865, 1234, 1427
FalI	AAGNNNNNCTT	2 cut(s)	526, 558
FaqI	GGGAC	2 cut(s)	323, 1322
FauI	CCCGC	1 cut(s)	1674
FauNDI	CATATG	3 cut(s)	1018, 1594, 1844
FbaI	TGATCA	2 cut(s)	402, 1527
FblI	GTMKAC	2 cut(s)	1722, 1890
FokI	GGATG	4 cut(s)	477, 597, 1346, 2165
FriOI	GRGCYC	3 cut(s)	827, 1539, 2024
FspBI	CTAG	4 cut(s)	711, 1272, 1694, 2121
GlaI	GCGC	1 cut(s)	2277
HaeII	RGCGCY	1 cut(s)	2279
HgaI	GACGC	1 cut(s)	1031
HhaI	GCGC	1 cut(s)	2278
Hin1I	GRCGYC	2 cut(s)	1299, 2276
Hin6I	GCGC	1 cut(s)	2276
HinP1I	GCGC	1 cut(s)	2276
HincII	GTYRAC	2 cut(s)	220, 616
HindII	GTYRAC	2 cut(s)	220, 616
HindIII	AAGCTT	1 cut(s)	56
HphI	GGTGA	5 cut(s)	95, 397, 1036, 1462, 1646
Hpy188III	TCNNGA	7 cut(s)	423, 457, 973, 1124, 1279, 1748, 2234
Hpy99I	CGWCG	3 cut(s)	146, 1069, 1301
HpyCH4III	ACNGT	3 cut(s)	130, 1145, 2068
HpyCH4IV	ACGT	1 cut(s)	1299
HpyF10VI	GCNNNNNNNGC	8 cut(s)	18, 55, 861, 882, 915, 1022, 1516, 2162
HpyF3I	CTNAG	6 cut(s)	273, 525, 1026, 1157, 1671, 2037
HpySE526I	ACGT	1 cut(s)	1299
Hsp92I	GRCGYC	2 cut(s)	1299, 2276
HspAI	GCGC	1 cut(s)	2276
KasI	GGCGCC	1 cut(s)	2275
KroI	GCCGGC	1 cut(s)	2032
KroNI	GCCGGC	1 cut(s)	2034
Ksp22I	TGATCA	2 cut(s)	402, 1527
LguI	GCTCTTC	1 cut(s)	815
LmnI	GCTCC	5 cut(s)	425, 830, 1422, 1534, 2027
Lsp1109I	GCAGC	8 cut(s)	21, 295, 499, 509, 512, 756, 930, 2285
LweI	GCATC	3 cut(s)	499, 561, 2143
MaeI	CTAG	4 cut(s)	711, 1272, 1694, 2121
MaeII	ACGT	1 cut(s)	1299
MaeIII	GTNAC	5 cut(s)	706, 1579, 1634, 1649, 2243
MbiI	CCGCTC	1 cut(s)	272
MflI	RGATCY	1 cut(s)	1662
MhlI	GDGCHC	6 cut(s)	827, 1539, 1764, 2024, 2049, 2255
MluCI	AATT	7 cut(s)	224, 329, 554, 1138, 1245, 1643, 1961
Mly113I	GGCGCC	1 cut(s)	2276
MlyI	GAGTC	4 cut(s)	345, 611, 1055, 1896
MmeI	TCCRAC	3 cut(s)	344, 1444, 2294
Mph1103I	ATGCAT	1 cut(s)	1018
MroNI	GCCGGC	1 cut(s)	2032
MroXI	GAANNNNTTC	2 cut(s)	564, 1907
MseI	TTAA	4 cut(s)	1370, 1442, 1587, 2308
MslI	CAYNNNNRTG	2 cut(s)	1607, 1994
MspA1I	CMGCKG	1 cut(s)	250
MvaI	CCWGG	2 cut(s)	372, 936
MwoI	GCNNNNNNNGC	8 cut(s)	18, 55, 861, 882, 915, 1022, 1516, 2162
NaeI	GCCGGC	1 cut(s)	2034
NarI	GGCGCC	1 cut(s)	2276
NcoI	CCATGG	2 cut(s)	1234, 1427
NdeI	CATATG	3 cut(s)	1018, 1594, 1844
NgoMIV	GCCGGC	1 cut(s)	2032
NlaIV	GGNNCC	4 cut(s)	236, 1949, 2023, 2277
NmeAIII	GCCGAG	1 cut(s)	2287
NmuCI	GTSAC	4 cut(s)	1579, 1634, 1649, 2243
NsiI	ATGCAT	1 cut(s)	1018
NspI	RCATGY	5 cut(s)	398, 631, 1223, 1809, 1999
PceI	AGGCCT	1 cut(s)	470
PciI	ACATGT	3 cut(s)	394, 627, 1219
PciSI	GCTCTTC	1 cut(s)	815
PcsI	WCGNNNNNNNCGW	1 cut(s)	1755
PdiI	GCCGGC	1 cut(s)	2034
PdmI	GAANNNNTTC	2 cut(s)	564, 1907
PfeI	GAWTC	6 cut(s)	205, 244, 367, 1099, 1331, 1751
PfoI	TCCNGGA	1 cut(s)	766
PinAI	ACCGGT	1 cut(s)	1905
Ple19I	CGATCG	1 cut(s)	1123
PleI	GAGTC	4 cut(s)	344, 611, 1055, 1895
PluTI	GGCGCC	1 cut(s)	2279
PpsI	GAGTC	4 cut(s)	344, 611, 1055, 1895
PscI	ACATGT	3 cut(s)	394, 627, 1219
Psp124BI	GAGCTC	2 cut(s)	827, 1539
Psp6I	CCWGG	2 cut(s)	370, 934
PspGI	CCWGG	2 cut(s)	370, 934
PspN4I	GGNNCC	4 cut(s)	236, 1949, 2023, 2277
PspPI	GGNCC	6 cut(s)	374, 894, 1008, 1069, 1859, 2216
PstI	CTGCAG	2 cut(s)	499, 720
PsuI	RGATCY	1 cut(s)	1662
PvuI	CGATCG	1 cut(s)	1123
PvuII	CAGCTG	1 cut(s)	250
RsaI	GTAC	4 cut(s)	447, 1162, 1614, 2096
RsaNI	GTAC	4 cut(s)	446, 1161, 1613, 2095
RseI	CAYNNNNRTG	2 cut(s)	1607, 1994
SacI	GAGCTC	2 cut(s)	827, 1539
SapI	GCTCTTC	1 cut(s)	815
SaqAI	TTAA	4 cut(s)	1370, 1442, 1587, 2308
Sau96I	GGNCC	6 cut(s)	374, 894, 1008, 1069, 1859, 2216
SchI	GAGTC	4 cut(s)	345, 611, 1055, 1896
SduI	GDGCHC	6 cut(s)	827, 1539, 1764, 2024, 2049, 2255
SfaNI	GCATC	3 cut(s)	499, 561, 2143
SfcI	CTRYAG	2 cut(s)	495, 716
SfoI	GGCGCC	1 cut(s)	2277
SinI	GGWCC	2 cut(s)	894, 1008
SmaI	CCCGGG	4 cut(s)	1091, 1560, 1812, 2281
SmiMI	CAYNNNNRTG	2 cut(s)	1607, 1994
SmlI	CTYRAG	1 cut(s)	1186
SmoI	CTYRAG	1 cut(s)	1186
SpeI	ACTAGT	1 cut(s)	1271
Sse9I	AATT	7 cut(s)	224, 329, 554, 1138, 1245, 1643, 1961
SseBI	AGGCCT	1 cut(s)	470
SsiI	CCGC	4 cut(s)	270, 432, 1667, 2030
SspDI	GGCGCC	1 cut(s)	2275
SspMI	CTAG	4 cut(s)	711, 1272, 1694, 2121
SstI	GAGCTC	2 cut(s)	827, 1539
StuI	AGGCCT	1 cut(s)	470
StyI	CCWWGG	3 cut(s)	865, 1234, 1427
TaaI	ACNGT	3 cut(s)	130, 1145, 2068
TaiI	ACGT	1 cut(s)	1302
TasI	AATT	7 cut(s)	224, 329, 554, 1138, 1245, 1643, 1961
TatI	WGTACW	2 cut(s)	445, 2094
TauI	GCSGC	2 cut(s)	435, 2032
TfiI	GAWTC	6 cut(s)	205, 244, 367, 1099, 1331, 1751
Tru1I	TTAA	4 cut(s)	1370, 1442, 1587, 2308
Tru9I	TTAA	4 cut(s)	1370, 1442, 1587, 2308
TscAI	CASTG	3 cut(s)	838, 2248, 2255
TseFI	GTSAC	4 cut(s)	1579, 1634, 1649, 2243
TseI	GCWGC	8 cut(s)	9, 308, 487, 497, 500, 744, 918, 2298
Tsp45I	GTSAC	4 cut(s)	1579, 1634, 1649, 2243
TspDTI	ATGAA	7 cut(s)	105, 380, 872, 1331, 1673, 1916, 2158
TspGWI	ACGGA	3 cut(s)	244, 1547, 1788
TspMI	CCCGGG	4 cut(s)	1089, 1558, 1810, 2279
TspRI	CASTG	3 cut(s)	838, 2248, 2255
VneI	GTGCAC	1 cut(s)	2045
VpaK11BI	GGWCC	2 cut(s)	894, 1008
XapI	RAATTY	4 cut(s)	224, 329, 554, 1961
XceI	RCATGY	5 cut(s)	398, 631, 1223, 1809, 1999
XmaI	CCCGGG	4 cut(s)	1089, 1558, 1810, 2279
XmiI	GTMKAC	2 cut(s)	1722, 1890
XmnI	GAANNNNTTC	2 cut(s)	564, 1907
XspI	CTAG	4 cut(s)	711, 1272, 1694, 2121
ZraI	GACGTC	1 cut(s)	1300
Zsp2I	ATGCAT	1 cut(s)	1018

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.