Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000850

Physical Location & Seq

Genomic Coordinates Forward (+)

22652715 .. 22656106

Gene Structure 3392 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT5G55930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGACGAGCGTTTTCGACGAACATAAACCCTCCGATGACTCTCACGAGTCCAAGATCGTCATCAATGGAGAAGAAGAGGTGTTGGAGGAGGAGAATGATAATCCGATTGAAGAAGTCCGGTTAACGGTACCGATAACCGACGATCCAACACTACCGGTGCTAACGTTTCGAACATGGACTCTTGGACTTTTCTCTTGCATATTGCTTGCCTTCGTGAACCAGTTCTTTGGTTTCCGGTCGAACCAGCTTTGGGTATCTTCAGTTGCGGCACAGATCGTGACCCTTCCGCTAGGGAAACTCATGGCAAAGACGCTACCGACAAAGAAATTTGGGTTTCCCGGGACGAATTGGTCGTGGTCTTTTAACCCTGGTCCGTTCAATATGAAGGAACATGTTCTTATTACAATATTTGCTAACACCGGAGCTGGTGGAGTTTACGCCACCAGTATTATTACCATTGTTAAAGCGTTTTATAATCGTCAACTTAATGTCGCCGCCGCCATGTTGCTCACTCAAACCACTCAGTTGTTGGGATATGGATGGGCTGGAATCTTCAGGAAGTTCCTTGTGGATTCACCGTATATGTGGTGGCCGTCAAATTTGGTTCAAGTCTCACTCTTTAGAGCTTTACATGAGAAGGAGGATCTACAAAAAGGGCAACAAACAAGGTTTAGATTCTTCATCATTGTCTTCTGTGTGAGCTTTGCTTACTACATAATCCCCGGCTACCTTTTCCCTTCCATTTCCGCAATTTCATTTGTTTGCTGGATTTGGAAAAGCTCAGTGACCGCTCAGATTGTCGGTTCTGGGCTCAAGGGTTTAGGTATTGGTTCGTTCGGTCTTGACTGGTCCACAGTTGCTGGTTTCTTAGGCAGTCCGTTGGCTGTACCATTCTTCGCCATTGCCAATTTCTTTGGAGGATTCTTCATCTTTTTATACATTGTTCTACCTATCTTCTACTGGACTAATGCTTATGATGCTCAGAAGTTTCCGTTCTATACTTCACACACCTTTGATCAGACTGGACACACCTATAACATTACCCGTATCCTCAATGAGAAGAATTTCGATATCAATCTAGACGCTTACAACGGTTACAGCAAGCTCTATTTGAGTGTGATGTTCGCGTTGCTCTATGGACTCAGCTTTGGTTCTCTTTGCGCTACCATCTCTCATGTTGCCCTCTATGATGGAAAGTTTATATGGGGAATGTGGAAGAAGGCAAAGACAGCAACAAAGGACAAGTACGGTGACGTGCATTCGAGATTGATGAAGAAGAATTATCAATCAGTACCTCAATGGTGGTTCATCGCAGTTCTAGTTATTTCCTTTGCTTTCGCACTCTATGCTTGCGAGGGCTTTGACAAACAGCTTCAGCTCCCATGGTGGGGACTTATACTCGCTTGCGCCATCGCTTTGTTCTTCACATTACCTATCGGAGTTATCCAAGCAACTACTAACCAGCAAATGGGTCTTAACGTTATAACAGAACTGATCATCGGGTACTTATACCCAGGAAAGCCACTAGCCAATGTCGCTTTCAAGACATACGGATACATCAGTATGTCTCAAGCCTTGTACTTTGTAGGAGACTTCAAGCTTGGTCACTACATGAAGATTCCTCCAAGATCAATGTTCATCGTCCAGCTTGTTGCAACTGTGGTTGCATCAACTGTCTGCTTCGGAACAACCTGGTGGCTCATTACATCCGTCGAGAACATATGTAATGTCGATTTGCTCCCGGTGGGTAGTCCATGGACTTGTCCTGGAGATGAAGTGTTCTACAATGCATCAATCATATGGGGAGTGATTGGTCCAGGGAGAATGTTTACCAAAGAAGGTATCTATCCCGGGATGAACTGGTTCTTCCTTATCGGTCTCCTCGCTCCAGTTCCCTTCTGGTACCTATCGAAGAAGTTCCCAGAGAAGAAATGGCTAAAACAGATCCATGTTCCCTTGATCTTCTCTGCAGTAAGCGCCATGCCACAAGCTAAGGCTGTGCATTACTGGTCCTGGGCCATCGTTGGGGTTGTGTTCAACTACTACATCTTCAGGAGGTTCAAAACTTGGTGGGCGAGGCACAATTACATCCTCTCTGCGGCGCTTGATGCAGGTACTGCGATTATGGGAGTGTTGATATTCTTCGCATTCCAGAACAATGATATAAGCTTACCTGATTGGTGGGGGCTTGAGAATTCAGACCATTGCCCTCTAGCGCATTGCCCTCTAGCCAAAGGTGTTGTTGTTGAAGGTTGTCCCGTGTTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

755

Amino Acids

85.35

Weight (kDa)

8.59

Isoelectric Point (pI)

32.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	54 - 716	4.1e-173	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000850)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26590 AT5G55930
fragaria_vesca	FvH4_3g42570 FvH4_3g42651 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660
malus_domestica	MD03G1029800.v1.1 MD03G1029900.v1.1 MD03G1030000.v1.1 MD07G1217200.v1.1 MD11G1034800.v1.1 MD11G1035000.v1.1 MD11G1035100.v1.1
prunus_persica	Prupe.6G026000_v2.0.a1 Prupe.6G026100_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026300_v2.0.a1
pyrus_communis	pycom03g02480 pycom03g02500 pycom11g02890 pycom11g02900
rosa_chinensis	RchiOBHm_Chr5g0076291 RchiOBHm_Chr5g0076301 RchiOBHm_Chr5g0076311 RchiOBHm_Chr5g0076621 RchiOBHm_Chr5g0076671
rosa_laevigata	RLG00000036614 RLG00000036615 RLG00000036616 RLG00000036617
rosa_multiflora	Rmu_co8320621.1_g000001 Rmu_co8419599.1_g000001 Rmu_co8455339.1_g000001 Rmu_sc0005961.1_g000002 Rmu_sc0005961.1_g000003 Rmu_sc0013948.1_g000002 Rmu_sc0035770.1_g000001 Rmu_sc0040547.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005490 Rroxscaffold_1G00005550 Rroxscaffold_1G00005560 Rroxscaffold_1G00005570
rosa_rugosa	Rorug05G0446700.1 Rorug05G0447000 Rorug05G0447100 Rorug05G0447200 Rorug05G0447200 Rorug05G0447300
rosa_samantha	Rh5AG501900 Rh5AG502000 Rh5AG502100 Rh5BG523700 Rh5BG523800 Rh5BG523900 Rh5CG547400 Rh5CG547500 Rh5CG547600 Rh5DG535900 Rh5DG536000 Rh5DG536100 Rh7AG436800
rosa_wichuraiana	Rw0G015040 Rw0G015060 Rw5G046590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	474, 1484
AasI	GACNNNNNNGTC	1 cut(s)	349
Acc36I	ACCTGC	1 cut(s)	2102
Acc65I	GGTACC	2 cut(s)	127, 1902
AccB1I	GGYRCC	2 cut(s)	127, 1902
AccB7I	CCANNNNNTGG	1 cut(s)	1468
AccBSI	CCGCTC	1 cut(s)	791
AccII	CGCG	1 cut(s)	1127
AciI	CCGC	7 cut(s)	266, 287, 495, 498, 747, 789, 2099
AclI	AACGTT	2 cut(s)	164, 1479
AclWI	GGATC	3 cut(s)	137, 651, 1939
AcoI	YGGCCR	1 cut(s)	590
AcsI	RAATTY	4 cut(s)	326, 598, 1063, 2194
AcuI	CTGAAG	4 cut(s)	243, 538, 1358, 2035
AfaI	GTAC	8 cut(s)	129, 888, 1247, 1293, 1505, 1580, 1904, 2116
AfiI	CCNNNNNNNGG	7 cut(s)	124, 250, 1387, 1388, 1468, 2025, 2098
AflIII	ACRYGT	1 cut(s)	391
AgeI	ACCGGT	1 cut(s)	154
AgsI	TTSAA	8 cut(s)	110, 379, 608, 1543, 1597, 2038, 2062, 2249
AjiI	CACGTC	1 cut(s)	1255
AjnI	CCWGG	6 cut(s)	367, 1513, 1691, 1765, 1816, 2012
AjuI	GAANNNNNNNTTGG	2 cut(s)	1523, 1555
Alw26I	GTCTC	4 cut(s)	616, 1572, 1584, 1883
AlwI	GGATC	3 cut(s)	137, 651, 1939
AlwNI	CAGNNNCTG	2 cut(s)	860, 2117
Ama87I	CYCGRG	2 cut(s)	338, 1850
AoxI	GGCC	2 cut(s)	590, 2016
ApoI	RAATTY	4 cut(s)	326, 598, 1063, 2194
AsiGI	ACCGGT	1 cut(s)	154
Asp700I	GAANNNNTTC	5 cut(s)	221, 393, 1064, 1862, 1916
Asp718I	GGTACC	2 cut(s)	127, 1902
AspLEI	GCGC	5 cut(s)	1163, 1409, 1979, 2104, 2218
AspS9I	GGNCC	5 cut(s)	371, 849, 1814, 2010, 2016
AsuC2I	CCSGG	6 cut(s)	339, 340, 723, 1742, 1851, 1852
AsuHPI	GGTGA	2 cut(s)	567, 1262
AsuII	TTCGAA	1 cut(s)	169
AvaI	CYCGRG	2 cut(s)	338, 1850
AvaII	GGWCC	4 cut(s)	371, 849, 1814, 2010
BaeI	ACNNNNGTAYC	2 cut(s)	1546, 1579
BanI	GGYRCC	2 cut(s)	127, 1902
BanII	GRGCYC	1 cut(s)	813
BauI	CACGAG	1 cut(s)	44
BbsI	GAAGAC	1 cut(s)	682
BccI	CCATC	5 cut(s)	534, 1175, 1184, 1418, 2027
BceAI	ACGGC	1 cut(s)	577
BciT130I	CCWGG	6 cut(s)	369, 1515, 1693, 1767, 1818, 2014
BciVI	GTATCC	2 cut(s)	1058, 1547
BclI	TGATCA	2 cut(s)	1015, 1494
BcnI	CCSGG	6 cut(s)	339, 340, 723, 1742, 1851, 1852
BcoDI	GTCTC	4 cut(s)	616, 1572, 1584, 1883
BfaI	CTAG	6 cut(s)	290, 1079, 1319, 1526, 2213, 2228
BfmI	CTRYAG	1 cut(s)	1968
BfoI	RGCGCY	2 cut(s)	1980, 2105
BfuAI	ACCTGC	1 cut(s)	2102
BfuI	GTATCC	2 cut(s)	1058, 1547
BisI	GCNGC	4 cut(s)	267, 495, 498, 2100
BlsI	GCNGC	4 cut(s)	268, 496, 499, 2101
Bme18I	GGWCC	4 cut(s)	371, 849, 1814, 2010
BmeT110I	CYCGRG	2 cut(s)	338, 1850
BmgBI	CACGTC	1 cut(s)	1255
BmgT120I	GGNCC	5 cut(s)	371, 849, 1814, 2010, 2016
BmiI	GGNNCC	2 cut(s)	129, 1904
BmsI	GCATC	4 cut(s)	967, 1676, 1799, 2098
BpiI	GAAGAC	1 cut(s)	682
BpmI	CTGGAG	2 cut(s)	1788, 1872
Bpu10I	CCTNAGC	1 cut(s)	1992
Bpu14I	TTCGAA	1 cut(s)	169
BpuEI	CTTGAG	3 cut(s)	797, 1554, 2210
BpuMI	CCSGG	6 cut(s)	339, 340, 723, 1742, 1851, 1852
BsaBI	GATNNNNATC	2 cut(s)	59, 1074
BsaI	GGTCTC	1 cut(s)	1883
BsaJI	CCNNGG	9 cut(s)	338, 367, 721, 1382, 1513, 1754, 1817, 1850, 2013
BsaWI	WCCGGW	4 cut(s)	117, 154, 234, 419
BsaXI	ACNNNNNCTCC	2 cut(s)	1761, 1791
Bsc4I	CCNNNNNNNGG	7 cut(s)	124, 250, 1387, 1388, 1468, 2025, 2098
Bse118I	RCCGGY	1 cut(s)	154
Bse1I	ACTGG	8 cut(s)	220, 444, 851, 965, 1027, 1865, 1889, 2012
Bse3DI	GCAATG	3 cut(s)	900, 2203, 2218
Bse8I	GATNNNNATC	2 cut(s)	59, 1074
BseBI	CCWGG	6 cut(s)	369, 1515, 1693, 1767, 1818, 2014
BseDI	CCNNGG	9 cut(s)	338, 367, 721, 1382, 1513, 1754, 1817, 1850, 2013
BseGI	GGATG	4 cut(s)	545, 1706, 1860, 2088
BseJI	GATNNNNATC	2 cut(s)	59, 1074
BseLI	CCNNNNNNNGG	7 cut(s)	124, 250, 1387, 1388, 1468, 2025, 2098
BseMI	GCAATG	3 cut(s)	900, 2203, 2218
BseMII	CTCAG	5 cut(s)	536, 795, 806, 995, 1156
BseNI	ACTGG	8 cut(s)	220, 444, 851, 965, 1027, 1865, 1889, 2012
BseRI	GAGGAG	3 cut(s)	101, 104, 1871
Bsh1236I	CGCG	1 cut(s)	1127
Bsh1285I	CGRYCG	1 cut(s)	239
BshFI	GGCC	2 cut(s)	592, 2018
BshNI	GGYRCC	2 cut(s)	127, 1902
BshTI	ACCGGT	1 cut(s)	154
BsiEI	CGRYCG	1 cut(s)	239
BsiHKCI	CYCGRG	2 cut(s)	338, 1850
BsiSI	CCGG	8 cut(s)	118, 155, 235, 339, 420, 723, 1742, 1851
BslFI	GGGAC	3 cut(s)	355, 1404, 2241
BslI	CCNNNNNNNGG	7 cut(s)	124, 250, 1387, 1388, 1468, 2025, 2098
BsmAI	GTCTC	4 cut(s)	616, 1572, 1584, 1883
BsmFI	GGGAC	3 cut(s)	355, 1404, 2241
BsmI	GAATGC	2 cut(s)	1258, 2147
BsnI	GGCC	2 cut(s)	592, 2018
Bso31I	GGTCTC	1 cut(s)	1883
BsoBI	CYCGRG	2 cut(s)	338, 1850
Bsp119I	TTCGAA	1 cut(s)	169
Bsp1286I	GDGCHC	1 cut(s)	813
Bsp143I	GATC	9 cut(s)	54, 142, 273, 643, 1015, 1494, 1628, 1944, 1959
Bsp19I	CCATGG	2 cut(s)	1382, 1754
BspACI	CCGC	7 cut(s)	266, 287, 495, 498, 747, 789, 2099
BspANI	GGCC	2 cut(s)	592, 2018
BspCNI	CTCAG	5 cut(s)	535, 794, 805, 994, 1155
BspFNI	CGCG	1 cut(s)	1127
BspLI	GGNNCC	2 cut(s)	129, 1904
BspMAI	CTGCAG	1 cut(s)	1972
BspMI	ACCTGC	1 cut(s)	2102
BspPI	GGATC	3 cut(s)	137, 651, 1939
BspT104I	TTCGAA	1 cut(s)	169
BspT107I	GGYRCC	2 cut(s)	127, 1902
BspTNI	GGTCTC	1 cut(s)	1883
BsrBI	CCGCTC	1 cut(s)	791
BsrDI	GCAATG	3 cut(s)	900, 2203, 2218
BsrFI	RCCGGY	1 cut(s)	154
BsrI	ACTGG	8 cut(s)	220, 444, 851, 965, 1027, 1865, 1889, 2012
BssAI	RCCGGY	1 cut(s)	154
BssECI	CCNNGG	9 cut(s)	338, 367, 721, 1382, 1513, 1754, 1817, 1850, 2013
BssMI	GATC	9 cut(s)	54, 142, 273, 643, 1015, 1494, 1628, 1944, 1959
BssSI	CACGAG	1 cut(s)	44
BssT1I	CCWWGG	2 cut(s)	1382, 1754
Bst2BI	CACGAG	1 cut(s)	44
Bst2UI	CCWGG	6 cut(s)	369, 1515, 1693, 1767, 1818, 2014
Bst4CI	ACNGT	7 cut(s)	127, 579, 856, 1094, 1250, 1660, 1675
Bst6I	CTCTTC	1 cut(s)	69
BstAPI	GCANNNNNTGC	2 cut(s)	1346, 2117
BstBI	TTCGAA	1 cut(s)	169
BstC8I	GCNNGC	4 cut(s)	207, 1103, 1351, 1405
BstDEI	CTNAG	7 cut(s)	522, 781, 792, 868, 981, 1142, 1992
BstDSI	CCRYGG	2 cut(s)	1382, 1754
BstF5I	GGATG	4 cut(s)	545, 1706, 1860, 2088
BstFNI	CGCG	1 cut(s)	1127
BstH2I	RGCGCY	2 cut(s)	1980, 2105
BstHHI	GCGC	5 cut(s)	1163, 1409, 1979, 2104, 2218
BstKTI	GATC	9 cut(s)	57, 145, 276, 646, 1018, 1497, 1631, 1947, 1962
BstMAI	GTCTC	4 cut(s)	616, 1572, 1584, 1883
BstMBI	GATC	9 cut(s)	54, 142, 273, 643, 1015, 1494, 1628, 1944, 1959
BstMCI	CGRYCG	1 cut(s)	239
BstMWI	GCNNNNNNNGC	7 cut(s)	977, 1229, 1346, 1535, 1976, 2108, 2117
BstNI	CCWGG	6 cut(s)	369, 1515, 1693, 1767, 1818, 2014
BstNSI	RCATGY	1 cut(s)	395
BstSFI	CTRYAG	1 cut(s)	1968
BstUI	CGCG	1 cut(s)	1127
BstV2I	GAAGAC	1 cut(s)	682
BstX2I	RGATCY	2 cut(s)	643, 1944
BstXI	CCANNNNNNTGG	1 cut(s)	227
BstYI	RGATCY	2 cut(s)	643, 1944
BsuI	GTATCC	2 cut(s)	1058, 1547
BsuRI	GGCC	2 cut(s)	592, 2018
BtgI	CCRYGG	2 cut(s)	1382, 1754
BtgZI	GCGATG	2 cut(s)	1294, 1396
BtrI	CACGTC	1 cut(s)	1255
BtsCI	GGATG	4 cut(s)	545, 1706, 1860, 2088
BtsIMutI	CAGTG	1 cut(s)	789
BveI	ACCTGC	1 cut(s)	2102
Cac8I	GCNNGC	4 cut(s)	207, 1103, 1351, 1405
CaiI	CAGNNNCTG	2 cut(s)	860, 2117
CfoI	GCGC	5 cut(s)	1163, 1409, 1979, 2104, 2218
Cfr10I	RCCGGY	1 cut(s)	154
Cfr13I	GGNCC	5 cut(s)	371, 849, 1814, 2010, 2016
Cfr9I	CCCGGG	2 cut(s)	338, 1850
CseI	GACGC	2 cut(s)	319, 1091
CsiI	ACCWGGT	1 cut(s)	1691
Csp6I	GTAC	8 cut(s)	128, 887, 1246, 1292, 1504, 1579, 1903, 2115
CspAI	ACCGGT	1 cut(s)	154
CviQI	GTAC	8 cut(s)	128, 887, 1246, 1292, 1504, 1579, 1903, 2115
DdeI	CTNAG	7 cut(s)	522, 781, 792, 868, 981, 1142, 1992
DpnI	GATC	9 cut(s)	56, 144, 275, 645, 1017, 1496, 1630, 1946, 1961
DpnII	GATC	9 cut(s)	54, 142, 273, 643, 1015, 1494, 1628, 1944, 1959
DrdI	GACNNNNNNGTC	1 cut(s)	349
DseDI	GACNNNNNNGTC	1 cut(s)	349
EaeI	YGGCCR	1 cut(s)	590
Eam1104I	CTCTTC	1 cut(s)	69
EarI	CTCTTC	1 cut(s)	69
Eco130I	CCWWGG	2 cut(s)	1382, 1754
Eco24I	GRGCYC	1 cut(s)	813
Eco31I	GGTCTC	1 cut(s)	1883
Eco32I	GATATC	1 cut(s)	1072
Eco47I	GGWCC	4 cut(s)	371, 849, 1814, 2010
Eco57I	CTGAAG	4 cut(s)	243, 538, 1358, 2035
Eco88I	CYCGRG	2 cut(s)	338, 1850
EcoRI	GAATTC	1 cut(s)	2194
EcoRII	CCWGG	6 cut(s)	367, 1513, 1691, 1765, 1816, 2012
EcoRV	GATATC	1 cut(s)	1072
EcoT14I	CCWWGG	2 cut(s)	1382, 1754
EcoT22I	ATGCAT	1 cut(s)	1792
EcoT38I	GRGCYC	1 cut(s)	813
ErhI	CCWWGG	2 cut(s)	1382, 1754
FaqI	GGGAC	3 cut(s)	355, 1404, 2241
FauNDI	CATATG	2 cut(s)	1721, 1799
FbaI	TGATCA	2 cut(s)	1015, 1494
Fnu4HI	GCNGC	4 cut(s)	267, 495, 498, 2100
FokI	GGATG	4 cut(s)	552, 1693, 1867, 2075
FriOI	GRGCYC	1 cut(s)	813
Fsp4HI	GCNGC	4 cut(s)	267, 495, 498, 2100
FspBI	CTAG	6 cut(s)	290, 1079, 1319, 1526, 2213, 2228
GlaI	GCGC	5 cut(s)	1162, 1408, 1978, 2103, 2217
GluI	GCNGC	4 cut(s)	267, 495, 498, 2100
GsuI	CTGGAG	2 cut(s)	1788, 1872
HaeII	RGCGCY	2 cut(s)	1980, 2105
HaeIII	GGCC	2 cut(s)	592, 2018
HapII	CCGG	8 cut(s)	118, 155, 235, 339, 420, 723, 1742, 1851
HgaI	GACGC	2 cut(s)	319, 1091
HhaI	GCGC	5 cut(s)	1163, 1409, 1979, 2104, 2218
Hin6I	GCGC	5 cut(s)	1161, 1407, 1977, 2102, 2216
HinP1I	GCGC	5 cut(s)	1161, 1407, 1977, 2102, 2216
HincII	GTYRAC	2 cut(s)	123, 482
HindII	GTYRAC	2 cut(s)	123, 482
HindIII	AAGCTT	2 cut(s)	1598, 2167
HinfI	GANTC	9 cut(s)	38, 47, 178, 549, 572, 675, 921, 1140, 1618
HpaI	GTTAAC	1 cut(s)	123
HpaII	CCGG	8 cut(s)	118, 155, 235, 339, 420, 723, 1742, 1851
HphI	GGTGA	2 cut(s)	567, 1262
Hpy166II	GTNNAC	6 cut(s)	123, 217, 436, 482, 852, 1830
Hpy188I	TCNGA	8 cut(s)	34, 105, 795, 984, 1020, 1439, 1685, 2200
Hpy8I	GTNNAC	6 cut(s)	123, 217, 436, 482, 852, 1830
Hpy99I	CGWCG	3 cut(s)	20, 143, 1715
HpyAV	CCTTC	9 cut(s)	220, 293, 379, 631, 747, 1213, 1832, 1906, 2243
HpyCH4III	ACNGT	7 cut(s)	127, 579, 856, 1094, 1250, 1660, 1675
HpyCH4IV	ACGT	3 cut(s)	164, 1254, 1479
HpyCH4V	TGCA	8 cut(s)	198, 1258, 1655, 1667, 1790, 1970, 2002, 2111
HpyF10VI	GCNNNNNNNGC	7 cut(s)	977, 1229, 1346, 1535, 1976, 2108, 2117
HpyF3I	CTNAG	7 cut(s)	522, 781, 792, 868, 981, 1142, 1992
HpySE526I	ACGT	3 cut(s)	164, 1254, 1479
HspAI	GCGC	5 cut(s)	1161, 1407, 1977, 2102, 2216
KpnI	GGTACC	2 cut(s)	131, 1906
Ksp22I	TGATCA	2 cut(s)	1015, 1494
KspAI	GTTAAC	1 cut(s)	123
Kzo9I	GATC	9 cut(s)	54, 142, 273, 643, 1015, 1494, 1628, 1944, 1959
LmnI	GCTCC	4 cut(s)	422, 1383, 1743, 1891
LweI	GCATC	4 cut(s)	967, 1676, 1799, 2098
MabI	ACCWGGT	1 cut(s)	1691
MaeI	CTAG	6 cut(s)	290, 1079, 1319, 1526, 2213, 2228
MaeII	ACGT	3 cut(s)	164, 1254, 1479
MaeIII	GTNAC	5 cut(s)	277, 784, 1094, 1250, 1604
MalI	GATC	9 cut(s)	56, 144, 275, 645, 1017, 1496, 1630, 1946, 1961
MbiI	CCGCTC	1 cut(s)	791
MboI	GATC	9 cut(s)	54, 142, 273, 643, 1015, 1494, 1628, 1944, 1959
MflI	RGATCY	2 cut(s)	643, 1944
MhlI	GDGCHC	1 cut(s)	813
MluCI	AATT	9 cut(s)	326, 346, 598, 750, 907, 1063, 1279, 2083, 2194
MlyI	GAGTC	4 cut(s)	32, 56, 172, 1134
MmeI	TCCRAC	2 cut(s)	63, 170
Mph1103I	ATGCAT	1 cut(s)	1792
MroXI	GAANNNNTTC	5 cut(s)	221, 393, 1064, 1862, 1916
MseI	TTAA	6 cut(s)	122, 363, 462, 486, 1476, 2266
MslI	CAYNNNNRTG	1 cut(s)	1562
MspI	CCGG	8 cut(s)	118, 155, 235, 339, 420, 723, 1742, 1851
Mva1269I	GAATGC	2 cut(s)	1258, 2147
MvaI	CCWGG	6 cut(s)	369, 1515, 1693, 1767, 1818, 2014
MvnI	CGCG	1 cut(s)	1127
MwoI	GCNNNNNNNGC	7 cut(s)	977, 1229, 1346, 1535, 1976, 2108, 2117
NciI	CCSGG	6 cut(s)	339, 340, 723, 1742, 1851, 1852
NcoI	CCATGG	2 cut(s)	1382, 1754
NdeI	CATATG	2 cut(s)	1721, 1799
NdeII	GATC	9 cut(s)	54, 142, 273, 643, 1015, 1494, 1628, 1944, 1959
NlaIV	GGNNCC	2 cut(s)	129, 1904
NmuCI	GTSAC	4 cut(s)	277, 784, 1250, 1604
NsiI	ATGCAT	1 cut(s)	1792
NspI	RCATGY	1 cut(s)	395
NspV	TTCGAA	1 cut(s)	169
PciI	ACATGT	1 cut(s)	391
PcsI	WCGNNNNNNNCGW	1 cut(s)	350
PctI	GAATGC	2 cut(s)	1258, 2147
PdmI	GAANNNNTTC	5 cut(s)	221, 393, 1064, 1862, 1916
PfeI	GAWTC	5 cut(s)	549, 572, 675, 921, 1618
PflMI	CCANNNNNTGG	1 cut(s)	1468
PfoI	TCCNGGA	1 cut(s)	1765
PinAI	ACCGGT	1 cut(s)	154
PkrI	GCNGC	4 cut(s)	268, 496, 499, 2101
PleI	GAGTC	4 cut(s)	32, 55, 172, 1134
PpsI	GAGTC	4 cut(s)	32, 55, 172, 1134
PscI	ACATGT	1 cut(s)	391
PsiI	TTATAA	2 cut(s)	474, 1484
Psp1406I	AACGTT	2 cut(s)	164, 1479
Psp6I	CCWGG	6 cut(s)	367, 1513, 1691, 1765, 1816, 2012
PspGI	CCWGG	6 cut(s)	367, 1513, 1691, 1765, 1816, 2012
PspN4I	GGNNCC	2 cut(s)	129, 1904
PspPI	GGNCC	5 cut(s)	371, 849, 1814, 2010, 2016
PstI	CTGCAG	1 cut(s)	1972
PstNI	CAGNNNCTG	2 cut(s)	860, 2117
PsuI	RGATCY	2 cut(s)	643, 1944
RsaI	GTAC	8 cut(s)	129, 888, 1247, 1293, 1505, 1580, 1904, 2116
RsaNI	GTAC	8 cut(s)	128, 887, 1246, 1292, 1504, 1579, 1903, 2115
RseI	CAYNNNNRTG	1 cut(s)	1562
SaqAI	TTAA	6 cut(s)	122, 363, 462, 486, 1476, 2266
SatI	GCNGC	4 cut(s)	267, 495, 498, 2100
Sau3AI	GATC	9 cut(s)	54, 142, 273, 643, 1015, 1494, 1628, 1944, 1959
Sau96I	GGNCC	5 cut(s)	371, 849, 1814, 2010, 2016
SchI	GAGTC	4 cut(s)	32, 56, 172, 1134
SduI	GDGCHC	1 cut(s)	813
SexAI	ACCWGGT	1 cut(s)	1691
SfaNI	GCATC	4 cut(s)	967, 1676, 1799, 2098
SfcI	CTRYAG	1 cut(s)	1968
SfuI	TTCGAA	1 cut(s)	169
SinI	GGWCC	4 cut(s)	371, 849, 1814, 2010
SmaI	CCCGGG	2 cut(s)	340, 1852
SmiMI	CAYNNNNRTG	1 cut(s)	1562
SmlI	CTYRAG	3 cut(s)	812, 1569, 2189
SmoI	CTYRAG	3 cut(s)	812, 1569, 2189
Sse9I	AATT	9 cut(s)	326, 346, 598, 750, 907, 1063, 1279, 2083, 2194
SsiI	CCGC	7 cut(s)	266, 287, 495, 498, 747, 789, 2099
SspI	AATATT	1 cut(s)	408
SspMI	CTAG	6 cut(s)	290, 1079, 1319, 1526, 2213, 2228
StyI	CCWWGG	2 cut(s)	1382, 1754
TaaI	ACNGT	7 cut(s)	127, 579, 856, 1094, 1250, 1660, 1675
TaiI	ACGT	3 cut(s)	167, 1257, 1482
TaqI	TCGA	8 cut(s)	15, 169, 239, 1068, 1262, 1713, 1731, 1910
TaqII	GACCGA	2 cut(s)	827, 1865
TasI	AATT	9 cut(s)	326, 346, 598, 750, 907, 1063, 1279, 2083, 2194
TatI	WGTACW	1 cut(s)	1578
TauI	GCSGC	4 cut(s)	269, 497, 500, 2102
TfiI	GAWTC	5 cut(s)	549, 572, 675, 921, 1618
Tru1I	TTAA	6 cut(s)	122, 363, 462, 486, 1476, 2266
Tru9I	TTAA	6 cut(s)	122, 363, 462, 486, 1476, 2266
TscAI	CASTG	1 cut(s)	789
TseFI	GTSAC	4 cut(s)	277, 784, 1250, 1604
Tsp45I	GTSAC	4 cut(s)	277, 784, 1250, 1604
TspGWI	ACGGA	5 cut(s)	363, 867, 981, 1566, 1699
TspMI	CCCGGG	2 cut(s)	338, 1850
TspRI	CASTG	1 cut(s)	789
Van91I	CCANNNNNTGG	1 cut(s)	1468
VpaK11BI	GGWCC	4 cut(s)	371, 849, 1814, 2010
XapI	RAATTY	4 cut(s)	326, 598, 1063, 2194
XbaI	TCTAGA	1 cut(s)	1078
XceI	RCATGY	1 cut(s)	395
XcmI	CCANNNNNNNNNTGG	3 cut(s)	526, 1896, 1929
XmaI	CCCGGG	2 cut(s)	338, 1850
XmnI	GAANNNNTTC	5 cut(s)	221, 393, 1064, 1862, 1916
XspI	CTAG	6 cut(s)	290, 1079, 1319, 1526, 2213, 2228
Zsp2I	ATGCAT	1 cut(s)	1792

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.