Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000850

Physical Location & Seq

Genomic Coordinates Forward (+)

7525723 .. 7529490

Gene Structure 3768 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00005560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGACAGGTTTGGTTGACGATGGGGTTTCTCCAGGAGACCTCTCTAAGAGGCATCACTTTGACATTGACGTTATTGATGATGAAGTGAATGACAACCCTATTGAGGAAGTCAGGCTCACTGTTCCGATCACCGATGACCCTTCTCAACCAACCTTGACATTTCGGACTTGGGTTCTGGGCATACTCTCATGCGCCATTCTTGCCTTTGTCAACAAGTTTTTCGCATACCGTCGAAACCCGCTCTCTGTCGGATCAGTCTCAGCACAAATTCTTGTCCTCCCTCTGGGGAAGTTGATGGCTGCAACCCTCCCAACTAATCAATTACGGGTCCCCTTTACAAAATGGACATTTTCGATGAATCCGGGGCCTTTCAATCTGAAAGAGCATGTGCTTATCACCATATTTGCCAGCTCTGGAGCAAGCGGTGTCTATGCTGTGCATATGATCACAATGGTTCTGGCCTTTTACAAAAGGAATCTGCATCCTGTATCAGCCTTCTTGTTAGCACAAACCACACAGATGCTTGGGGCATTGCATGAAAAGGAAAAGAGGCCAAAGGGAGGCCGTACAAGGCTACAATTCTTCTTCTTGGTTTTCATATGCAGCTTTGCCTACTACATTGTTCCGGCTTACCTTTTCCCCTCCATATCTACTATCTCCATTGTTTGTTTGATATGGAAGAACTCCATAACTGCCCAACAGATTGGTTCTGGAGTCCGTGGACTTGGTATTGGCTCGTTTGGACTCGATTGGTCTACTGTTGCTGGTTTCTTAGGCAGTCCATTGGCTACACCAGGATTTGCTAACATTAACTTCTTAATTGGTTTTGTTCTGATTGTCTATATTGCTGCCCCCATTGCTTATTGGAACAATGCATATGGTTTTCAGAGGTTCCCACTTATTTCCTCTCATACTTTTGATGCGATGGGAAACACTTACAACATTTCCAGGATTCTAAATCAGAAAAGTTTCGACATCAATATGTCAGAATATAATAGCTACAGCAAAGTCCATCTCAGTACCTTCTTTGCCTTCACTTATGGACTGAGCTTTGCCAGTCTCACCTCTACAATTTCACATGTGTCACTTTTCTATGGAAAAACAATCTGGCACATGTGGAGAAAGACAGCTAGTTCTGTGAAAGCTCAAGTTAATGACATCCATACAAGGCTGATGAAGAAGAATTATGAAGCAGTCCCTCAATGGTGGTTTCACGTCATCCTTGTCTCAATGATTGGTCTTTCCATCTTCACTTGTGAAGGTTTTGGCAAACAGCTCCAACTTCCATGGTGGGGAGTTTTAATGGCTTGTGGCATTGCATTGTTCTTCACCTTACCCATTGGCATTATTAGTGCCACGACAAATACGGGAACTGGGATTAATGTGATTACAGAGATGGTAATCGGGTATATTTATCCAGGCAAGCCTCTTGCGAATGCGGCCTTCAAGACCTATGGCACTATCAGCATGTCACAAGCACTCTCGTTTCTAACTGACTTCAAATTGGGTCACTATATGAAGATCCCTCCAAAATCCATGTTTGTTGTTCAGTTAGCTGGAACACTAATTGCTTCTAGTGTCCAATTTGCCACATCTTGGTGGCTTCTCCACTCCATTGAGAACATCTGCGATGTCTCAAAGTTGCCGGATGGAAGTCCATGGACATGTCCCGGCGATGATGTCTTCTACAATGCTTCAATCATATGGGGAGTTGTCGGCCCGCTCAGAATGTTCGCCAACAAAGGCATCTACCCTGAATTGAACTGGTTCTTCCTCCTCGGTTTACTTGCGCCTGTTCCAGTCTGGTTCTTCTCCAAGAAATTCCCAAATCAAAAGTGGATTAAGCTCATAAACATGCCTATCATTATTGGAGCAGCTCAGAGTATTCCACCTGCTGGACCTGTCCACTACATTACATATGGAGCAGTTGCCATCTTCTTCAACTTCTATGTGTACAGAAAGTTCAAAGGCTGGTGGGCGAGGCATAACTACATCCTCTCAGCTGCTTTGGATGCTGGTGTGGCCTTCGCAGGTGTTCTCTTATATTTCGCACTTCAAAGTAAGGACATTATAGGGCCAAATTGGTGGGGCCTTGATAATAATGATCATTGCCCATTGGCCCGTTGCCCTACTGCACCAGGAGTAGTGGCCAAAGGGTGCCCAGTTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

723

Amino Acids

80.32

Weight (kDa)

9.27

Isoelectric Point (pI)

35.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	52 - 178	1.7e-25	OPT oligopeptide transporter protein
OPT	PF03169	171 - 684	3e-119	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000850)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26590 AT5G55930
fragaria_vesca	FvH4_3g42570 FvH4_3g42651 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660
malus_domestica	MD03G1029800.v1.1 MD03G1029900.v1.1 MD03G1030000.v1.1 MD07G1217200.v1.1 MD11G1034800.v1.1 MD11G1035000.v1.1 MD11G1035100.v1.1
prunus_persica	Prupe.6G026000_v2.0.a1 Prupe.6G026100_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026300_v2.0.a1
pyrus_communis	pycom03g02480 pycom03g02500 pycom11g02890 pycom11g02900
rosa_chinensis	RchiOBHm_Chr5g0076291 RchiOBHm_Chr5g0076301 RchiOBHm_Chr5g0076311 RchiOBHm_Chr5g0076621 RchiOBHm_Chr5g0076671
rosa_laevigata	RLG00000036614 RLG00000036615 RLG00000036616 RLG00000036617
rosa_multiflora	Rmu_co8320621.1_g000001 Rmu_co8419599.1_g000001 Rmu_co8455339.1_g000001 Rmu_sc0005961.1_g000002 Rmu_sc0005961.1_g000003 Rmu_sc0013948.1_g000002 Rmu_sc0035770.1_g000001 Rmu_sc0040547.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005490 Rroxscaffold_1G00005550 Rroxscaffold_1G00005560 Rroxscaffold_1G00005570
rosa_rugosa	Rorug05G0446700.1 Rorug05G0447000 Rorug05G0447100 Rorug05G0447200 Rorug05G0447200 Rorug05G0447300
rosa_samantha	Rh5AG501900 Rh5AG502000 Rh5AG502100 Rh5BG523700 Rh5BG523800 Rh5BG523900 Rh5CG547400 Rh5CG547500 Rh5CG547600 Rh5DG535900 Rh5DG536000 Rh5DG536100 Rh7AG436800
rosa_wichuraiana	Rw0G015040 Rw0G015060 Rw5G046590

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1900, 2021
Acc36I	ACCTGC	2 cut(s)	1900, 2021
AccB1I	GGYRCC	1 cut(s)	2157
AccB7I	CCANNNNNTGG	2 cut(s)	1596, 1895
AccBSI	CCGCTC	2 cut(s)	241, 1723
AccI	GTMKAC	1 cut(s)	755
AciI	CCGC	4 cut(s)	239, 423, 1439, 1721
AclWI	GGATC	2 cut(s)	259, 1516
AcoI	YGGCCR	1 cut(s)	2148
AcsI	RAATTY	2 cut(s)	267, 1820
AfaI	GTAC	3 cut(s)	568, 1021, 1955
AfiI	CCNNNNNNNGG	6 cut(s)	103, 283, 560, 1292, 1596, 1895
AflIII	ACRYGT	3 cut(s)	1078, 1113, 1664
AgsI	TTSAA	8 cut(s)	373, 1447, 1501, 1698, 1762, 1942, 1966, 2057
AjiI	CACGTC	1 cut(s)	1216
AjnI	CCWGG	5 cut(s)	31, 793, 947, 1417, 2137
Alw26I	GTCTC	5 cut(s)	30, 262, 1064, 1231, 1639
AlwI	GGATC	2 cut(s)	259, 1516
ApeKI	GCWGC	5 cut(s)	299, 603, 848, 1874, 2003
ApoI	RAATTY	2 cut(s)	267, 1820
AseI	ATTAAT	1 cut(s)	1380
Asp700I	GAANNNNTTC	2 cut(s)	968, 1766
AspLEI	GCGC	2 cut(s)	194, 1792
AspS9I	GGNCC	7 cut(s)	328, 365, 1718, 1898, 2075, 2089, 2119
AsuC2I	CCSGG	2 cut(s)	363, 1671
AsuHPI	GGTGA	4 cut(s)	121, 388, 1054, 1321
AvaII	GGWCC	2 cut(s)	328, 1898
BaeGI	GKGCMC	1 cut(s)	2162
BalI	TGGCCA	1 cut(s)	2150
BanI	GGYRCC	1 cut(s)	2157
BbsI	GAAGAC	1 cut(s)	1675
BbvI	GCAGC	5 cut(s)	286, 615, 835, 1886, 1990
BccI	CCATC	8 cut(s)	14, 289, 919, 1020, 1253, 1390, 1643, 1940
BceAI	ACGGC	1 cut(s)	549
BciT130I	CCWGG	5 cut(s)	33, 795, 949, 1419, 2139
BclI	TGATCA	2 cut(s)	444, 2104
BcnI	CCSGG	2 cut(s)	363, 1671
BcoDI	GTCTC	5 cut(s)	30, 262, 1064, 1231, 1639
BfaI	CTAG	2 cut(s)	1131, 1575
BfmI	CTRYAG	1 cut(s)	1000
BfuAI	ACCTGC	2 cut(s)	1900, 2021
BisI	GCNGC	6 cut(s)	300, 604, 849, 1440, 1875, 2004
BlsI	GCNGC	6 cut(s)	301, 605, 850, 1441, 1876, 2005
Bme1390I	CCNGG	7 cut(s)	33, 363, 795, 949, 1419, 1671, 2139
Bme18I	GGWCC	2 cut(s)	328, 1898
BmgBI	CACGTC	1 cut(s)	1216
BmgT120I	GGNCC	7 cut(s)	328, 365, 1718, 1898, 2075, 2089, 2119
BmiI	GGNNCC	6 cut(s)	329, 330, 366, 893, 2090, 2159
BmrFI	CCNGG	7 cut(s)	33, 363, 795, 949, 1419, 1671, 2139
BmrI	ACTGGG	2 cut(s)	1383, 2156
BmsI	GCATC	6 cut(s)	61, 490, 510, 910, 1755, 2002
BmuI	ACTGGG	2 cut(s)	1383, 2156
BpiI	GAAGAC	1 cut(s)	1675
BpmI	CTGGAG	3 cut(s)	15, 435, 732
BpuEI	CTTGAG	1 cut(s)	1131
BpuMI	CCSGG	2 cut(s)	363, 1671
BsaBI	GATNNNNATC	1 cut(s)	1400
BsaI	GGTCTC	1 cut(s)	30
BsaJI	CCNNGG	5 cut(s)	362, 718, 1286, 1658, 1777
Bsc4I	CCNNNNNNNGG	6 cut(s)	103, 283, 560, 1292, 1596, 1895
Bse1I	ACTGG	5 cut(s)	1056, 1378, 1769, 1799, 2162
Bse3DI	GCAATG	4 cut(s)	530, 855, 1314, 2107
Bse8I	GATNNNNATC	1 cut(s)	1400
BseBI	CCWGG	5 cut(s)	33, 795, 949, 1419, 2139
BseDI	CCNNGG	5 cut(s)	362, 718, 1286, 1658, 1777
BseGI	GGATG	6 cut(s)	481, 1158, 1218, 1654, 1992, 2017
BseJI	GATNNNNATC	1 cut(s)	1400
BseLI	CCNNNNNNNGG	6 cut(s)	103, 283, 560, 1292, 1596, 1895
BseMI	GCAATG	4 cut(s)	530, 855, 1314, 2107
BseMII	CTCAG	6 cut(s)	273, 1030, 1037, 1738, 1892, 2013
BseNI	ACTGG	5 cut(s)	1056, 1378, 1769, 1799, 2162
BseRI	GAGGAG	1 cut(s)	1766
BseSI	GKGCMC	1 cut(s)	2162
BseXI	GCAGC	5 cut(s)	286, 615, 835, 1886, 1990
BsgI	GTGCAG	1 cut(s)	2118
BshNI	GGYRCC	1 cut(s)	2157
BsiSI	CCGG	4 cut(s)	362, 626, 1646, 1671
BslFI	GGGAC	3 cut(s)	314, 1181, 1653
BslI	CCNNNNNNNGG	6 cut(s)	103, 283, 560, 1292, 1596, 1895
BsmAI	GTCTC	5 cut(s)	30, 262, 1064, 1231, 1639
BsmFI	GGGAC	3 cut(s)	314, 1181, 1653
BsmI	GAATGC	1 cut(s)	1441
Bso31I	GGTCTC	1 cut(s)	30
Bsp1286I	GDGCHC	1 cut(s)	2162
Bsp1407I	TGTACA	1 cut(s)	1953
Bsp143I	GATC	5 cut(s)	126, 251, 444, 1521, 2104
Bsp19I	CCATGG	2 cut(s)	1286, 1658
BspACI	CCGC	4 cut(s)	239, 423, 1439, 1721
BspCNI	CTCAG	6 cut(s)	272, 1029, 1038, 1737, 1891, 2012
BspLI	GGNNCC	6 cut(s)	329, 330, 366, 893, 2090, 2159
BspMI	ACCTGC	2 cut(s)	1900, 2021
BspPI	GGATC	2 cut(s)	259, 1516
BspT107I	GGYRCC	1 cut(s)	2157
BspTNI	GGTCTC	1 cut(s)	30
BsrBI	CCGCTC	2 cut(s)	241, 1723
BsrDI	GCAATG	4 cut(s)	530, 855, 1314, 2107
BsrGI	TGTACA	1 cut(s)	1953
BsrI	ACTGG	5 cut(s)	1056, 1378, 1769, 1799, 2162
BssECI	CCNNGG	5 cut(s)	362, 718, 1286, 1658, 1777
BssMI	GATC	5 cut(s)	126, 251, 444, 1521, 2104
BssT1I	CCWWGG	2 cut(s)	1286, 1658
Bst2UI	CCWGG	5 cut(s)	33, 795, 949, 1419, 2139
Bst4CI	ACNGT	3 cut(s)	121, 230, 760
BstAUI	TGTACA	1 cut(s)	1953
BstC8I	GCNNGC	4 cut(s)	409, 421, 1424, 1721
BstDEI	CTNAG	8 cut(s)	45, 259, 772, 1016, 1046, 1724, 1878, 1999
BstDSI	CCRYGG	3 cut(s)	718, 1286, 1658
BstF5I	GGATG	6 cut(s)	481, 1158, 1218, 1654, 1992, 2017
BstHHI	GCGC	2 cut(s)	194, 1792
BstKTI	GATC	5 cut(s)	129, 254, 447, 1524, 2107
BstMAI	GTCTC	5 cut(s)	30, 262, 1064, 1231, 1639
BstMBI	GATC	5 cut(s)	126, 251, 444, 1521, 2104
BstMWI	GCNNNNNNNGC	6 cut(s)	200, 857, 1439, 1464, 2012, 2021
BstNI	CCWGG	5 cut(s)	33, 795, 949, 1419, 2139
BstNSI	RCATGY	6 cut(s)	389, 1082, 1117, 1471, 1668, 1858
BstSCI	CCNGG	7 cut(s)	31, 361, 793, 947, 1417, 1669, 2137
BstSFI	CTRYAG	1 cut(s)	1000
BstSLI	GKGCMC	1 cut(s)	2162
BstV1I	GCAGC	5 cut(s)	286, 615, 835, 1886, 1990
BstV2I	GAAGAC	1 cut(s)	1675
BstX2I	RGATCY	1 cut(s)	1521
BstXI	CCANNNNNNTGG	2 cut(s)	704, 2085
BstYI	RGATCY	1 cut(s)	1521
BtgI	CCRYGG	3 cut(s)	718, 1286, 1658
BtgZI	GCGATG	3 cut(s)	938, 1644, 1689
BtrI	CACGTC	1 cut(s)	1216
BtsCI	GGATG	6 cut(s)	481, 1158, 1218, 1654, 1992, 2017
BtsIMutI	CAGTG	1 cut(s)	117
BveI	ACCTGC	2 cut(s)	1900, 2021
Cac8I	GCNNGC	4 cut(s)	409, 421, 1424, 1721
CfoI	GCGC	2 cut(s)	194, 1792
Cfr13I	GGNCC	7 cut(s)	328, 365, 1718, 1898, 2075, 2089, 2119
Csp6I	GTAC	3 cut(s)	567, 1020, 1954
CviQI	GTAC	3 cut(s)	567, 1020, 1954
DdeI	CTNAG	8 cut(s)	45, 259, 772, 1016, 1046, 1724, 1878, 1999
DpnI	GATC	5 cut(s)	128, 253, 446, 1523, 2106
DpnII	GATC	5 cut(s)	126, 251, 444, 1521, 2104
EaeI	YGGCCR	1 cut(s)	2148
Eco130I	CCWWGG	2 cut(s)	1286, 1658
Eco31I	GGTCTC	1 cut(s)	30
Eco47I	GGWCC	2 cut(s)	328, 1898
EcoO109I	RGGNCCY	3 cut(s)	328, 365, 2089
EcoRII	CCWGG	5 cut(s)	31, 793, 947, 1417, 2137
EcoT14I	CCWWGG	2 cut(s)	1286, 1658
EcoT22I	ATGCAT	1 cut(s)	877
ErhI	CCWWGG	2 cut(s)	1286, 1658
FaqI	GGGAC	3 cut(s)	314, 1181, 1653
FauI	CCCGC	2 cut(s)	246, 1728
FauNDI	CATATG	5 cut(s)	441, 599, 877, 1703, 1918
FbaI	TGATCA	2 cut(s)	444, 2104
FblI	GTMKAC	1 cut(s)	755
Fnu4HI	GCNGC	6 cut(s)	300, 604, 849, 1440, 1875, 2004
FokI	GGATG	6 cut(s)	468, 1145, 1205, 1661, 1979, 2024
Fsp4HI	GCNGC	6 cut(s)	300, 604, 849, 1440, 1875, 2004
FspBI	CTAG	2 cut(s)	1131, 1575
GlaI	GCGC	2 cut(s)	193, 1791
GluI	GCNGC	6 cut(s)	300, 604, 849, 1440, 1875, 2004
GsuI	CTGGAG	3 cut(s)	15, 435, 732
HapII	CCGG	4 cut(s)	362, 626, 1646, 1671
HhaI	GCGC	2 cut(s)	194, 1792
Hin6I	GCGC	2 cut(s)	192, 1790
HinP1I	GCGC	2 cut(s)	192, 1790
HincII	GTYRAC	2 cut(s)	16, 211
HindII	GTYRAC	2 cut(s)	16, 211
HinfI	GANTC	5 cut(s)	358, 475, 714, 744, 952
HpaII	CCGG	4 cut(s)	362, 626, 1646, 1671
HphI	GGTGA	4 cut(s)	121, 388, 1054, 1321
Hpy166II	GTNNAC	7 cut(s)	16, 211, 722, 756, 1784, 1906, 1954
Hpy188III	TCNNGA	3 cut(s)	414, 711, 1447
Hpy8I	GTNNAC	7 cut(s)	16, 211, 722, 756, 1784, 1906, 1954
Hpy99I	CGWCG	1 cut(s)	234
HpyAV	CCTTC	7 cut(s)	150, 505, 1033, 1042, 1253, 1453, 2035
HpyCH4III	ACNGT	3 cut(s)	121, 230, 760
HpyCH4IV	ACGT	2 cut(s)	69, 1215
HpyCH4V	TGCA	8 cut(s)	302, 439, 481, 535, 603, 875, 1319, 2135
HpyF10VI	GCNNNNNNNGC	6 cut(s)	200, 857, 1439, 1464, 2012, 2021
HpyF3I	CTNAG	8 cut(s)	45, 259, 772, 1016, 1046, 1724, 1878, 1999
HpySE526I	ACGT	2 cut(s)	69, 1215
HspAI	GCGC	2 cut(s)	192, 1790
KflI	GGGWCCC	1 cut(s)	328
Ksp22I	TGATCA	2 cut(s)	444, 2104
Kzo9I	GATC	5 cut(s)	126, 251, 444, 1521, 2104
LmnI	GCTCC	4 cut(s)	416, 1281, 1871, 1922
Lsp1109I	GCAGC	5 cut(s)	286, 615, 835, 1886, 1990
LweI	GCATC	6 cut(s)	61, 490, 510, 910, 1755, 2002
MaeI	CTAG	2 cut(s)	1131, 1575
MaeII	ACGT	2 cut(s)	69, 1215
MaeIII	GTNAC	3 cut(s)	1083, 1470, 1508
MalI	GATC	5 cut(s)	128, 253, 446, 1523, 2106
MbiI	CCGCTC	2 cut(s)	241, 1723
MboI	GATC	5 cut(s)	126, 251, 444, 1521, 2104
MflI	RGATCY	1 cut(s)	1521
MhlI	GDGCHC	1 cut(s)	2162
MlsI	TGGCCA	1 cut(s)	2150
MluNI	TGGCCA	1 cut(s)	2150
MlyI	GAGTC	2 cut(s)	723, 738
MmeI	TCCRAC	2 cut(s)	229, 1303
Mox20I	TGGCCA	1 cut(s)	2150
Mph1103I	ATGCAT	1 cut(s)	877
MroXI	GAANNNNTTC	2 cut(s)	968, 1766
MscI	TGGCCA	1 cut(s)	2150
MseI	TTAA	6 cut(s)	810, 818, 1152, 1301, 1380, 1842
MslI	CAYNNNNRTG	5 cut(s)	518, 980, 1597, 1663, 1853
Msp20I	TGGCCA	1 cut(s)	2150
MspA1I	CMGCKG	1 cut(s)	2003
MspI	CCGG	4 cut(s)	362, 626, 1646, 1671
MspR9I	CCNGG	7 cut(s)	33, 363, 795, 949, 1419, 1671, 2139
Mva1269I	GAATGC	1 cut(s)	1441
MvaI	CCWGG	5 cut(s)	33, 795, 949, 1419, 2139
MwoI	GCNNNNNNNGC	6 cut(s)	200, 857, 1439, 1464, 2012, 2021
NciI	CCSGG	2 cut(s)	363, 1671
NcoI	CCATGG	2 cut(s)	1286, 1658
NdeI	CATATG	5 cut(s)	441, 599, 877, 1703, 1918
NdeII	GATC	5 cut(s)	126, 251, 444, 1521, 2104
NlaIV	GGNNCC	6 cut(s)	329, 330, 366, 893, 2090, 2159
NmuCI	GTSAC	3 cut(s)	1083, 1470, 1508
NsiI	ATGCAT	1 cut(s)	877
NspI	RCATGY	6 cut(s)	389, 1082, 1117, 1471, 1668, 1858
PaqCI	CACCTGC	2 cut(s)	1900, 2021
PciI	ACATGT	3 cut(s)	1078, 1113, 1664
PctI	GAATGC	1 cut(s)	1441
PdmI	GAANNNNTTC	2 cut(s)	968, 1766
PfeI	GAWTC	3 cut(s)	358, 475, 952
PflMI	CCANNNNNTGG	2 cut(s)	1596, 1895
PfoI	TCCNGGA	2 cut(s)	31, 947
PkrI	GCNGC	6 cut(s)	301, 605, 850, 1441, 1876, 2005
PleI	GAGTC	2 cut(s)	722, 738
PpsI	GAGTC	2 cut(s)	722, 738
PpuMI	RGGWCCY	1 cut(s)	328
PscI	ACATGT	3 cut(s)	1078, 1113, 1664
PshBI	ATTAAT	1 cut(s)	1380
Psp5II	RGGWCCY	1 cut(s)	328
Psp6I	CCWGG	5 cut(s)	31, 793, 947, 1417, 2137
PspGI	CCWGG	5 cut(s)	31, 793, 947, 1417, 2137
PspN4I	GGNNCC	6 cut(s)	329, 330, 366, 893, 2090, 2159
PspPI	GGNCC	7 cut(s)	328, 365, 1718, 1898, 2075, 2089, 2119
PspPPI	RGGWCCY	1 cut(s)	328
PsrI	GAACNNNNNNTAC	2 cut(s)	1946, 1978
PsuI	RGATCY	1 cut(s)	1521
PvuII	CAGCTG	1 cut(s)	2003
RsaI	GTAC	3 cut(s)	568, 1021, 1955
RsaNI	GTAC	3 cut(s)	567, 1020, 1954
RseI	CAYNNNNRTG	5 cut(s)	518, 980, 1597, 1663, 1853
SaqAI	TTAA	6 cut(s)	810, 818, 1152, 1301, 1380, 1842
SatI	GCNGC	6 cut(s)	300, 604, 849, 1440, 1875, 2004
Sau3AI	GATC	5 cut(s)	126, 251, 444, 1521, 2104
Sau96I	GGNCC	7 cut(s)	328, 365, 1718, 1898, 2075, 2089, 2119
SchI	GAGTC	2 cut(s)	723, 738
ScrFI	CCNGG	7 cut(s)	33, 363, 795, 949, 1419, 1671, 2139
SduI	GDGCHC	1 cut(s)	2162
SfaNI	GCATC	6 cut(s)	61, 490, 510, 910, 1755, 2002
SfcI	CTRYAG	1 cut(s)	1000
SinI	GGWCC	2 cut(s)	328, 1898
SmiMI	CAYNNNNRTG	5 cut(s)	518, 980, 1597, 1663, 1853
SmlI	CTYRAG	1 cut(s)	1146
SmoI	CTYRAG	1 cut(s)	1146
SsiI	CCGC	4 cut(s)	239, 423, 1439, 1721
SspMI	CTAG	2 cut(s)	1131, 1575
StyD4I	CCNGG	7 cut(s)	31, 361, 793, 947, 1417, 1669, 2137
StyI	CCWWGG	2 cut(s)	1286, 1658
TaaI	ACNGT	3 cut(s)	121, 230, 760
TaiI	ACGT	2 cut(s)	72, 1218
TaqI	TCGA	4 cut(s)	232, 353, 747, 972
TatI	WGTACW	1 cut(s)	1953
TauI	GCSGC	1 cut(s)	1442
TfiI	GAWTC	3 cut(s)	358, 475, 952
Tru1I	TTAA	6 cut(s)	810, 818, 1152, 1301, 1380, 1842
Tru9I	TTAA	6 cut(s)	810, 818, 1152, 1301, 1380, 1842
TscAI	CASTG	1 cut(s)	124
TseFI	GTSAC	3 cut(s)	1083, 1470, 1508
TseI	GCWGC	5 cut(s)	299, 603, 848, 1874, 2003
Tsp45I	GTSAC	3 cut(s)	1083, 1470, 1508
TspDTI	ATGAA	7 cut(s)	96, 371, 552, 586, 1190, 1203, 1532
TspGWI	ACGGA	1 cut(s)	707
TspRI	CASTG	1 cut(s)	124
Van91I	CCANNNNNTGG	2 cut(s)	1596, 1895
VpaK11BI	GGWCC	2 cut(s)	328, 1898
VspI	ATTAAT	1 cut(s)	1380
XapI	RAATTY	2 cut(s)	267, 1820
XceI	RCATGY	6 cut(s)	389, 1082, 1117, 1471, 1668, 1858
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1833
XmiI	GTMKAC	1 cut(s)	755
XmnI	GAANNNNTTC	2 cut(s)	968, 1766
XspI	CTAG	2 cut(s)	1131, 1575
Zsp2I	ATGCAT	1 cut(s)	877

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.