Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0000850

Physical Location & Seq

Genomic Coordinates Reverse (-)

84986529 .. 84991591

Gene Structure 5063 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG501900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1626 bp

ATGAGACCAAAGGGAGGCCGTACTAGGCTGCAGTACTTCAGCTTAGTATTTGTATGCAGCTTCGCTTATTATATTATTCCAAGTTTTTTCTTCCCCTCCATAGGCGCTCTCTCCTTTGTTTGTTGGATATGGAAGGACTCCGTCACCGCCCAACAGATTGGTTCCGGCCTCAATGGCCTTGGCATTGGCTCGTTTGGCCTTGATTGGTCAACTGTTGCTAGCTTCTTGAAGAGCCCATTAGCCACACCCGGTTTTGTCTTCATGAACATGTTGGCTGGTTTTGTCTTCATTTTCTACATTCTTACCCCCATTTTTTATTGGTCCAATGTAAAAGATGCCAAGAAGTTTCCCTTCTTTTCTTCTTCTACTTTCGACTCCACTGGCAAACGCTATAATGTTTCCCGAGTTCTGGACCAGAAAACTTTCGATATTAATTTGAAAGAATATAACAGTTACAGTAAACTCCATCTCTCTATGTACTTTGCCTCGAGTTATGGGTGGAGCTTTGCTGGTCTGACAGCAACTATTTCACATGTTGCACTCTTCCATGGAAAAGACATCTGGGATATGTGGAAAAAGACTTCTACCGCAGCGAAAGATCAGCTTGGGGACATCCACACACGGTTGATGAAGAAGAACTACGAGGCAGTCCCACAATGGTGGTTTCACATCATGCTTGTTTTAATGGTTGGCCTTTCCATCTGGGTCTGTGAAGGTTTTGGGAAACAGCTCCAACTTCCATGGTGGGGAGTCTTACTGGCTTGTGCCATTGCACTATCTTTCACCTTACCCATTGGCATTATTCAAGCCACAACAAATATGCAACCGGGGCTCAATGTGATCACAGAGTTGGTTATTGGGTATCTTTATCCTGGGAAGCCTCTTGCCAATGTGACTTTCAAAACATATGGCTATATCAGCATGTCACAAGCACTCATGTTTCTCGGTGACTTCAAATTAGGTCACTATATGAAGATCCCTCCCAAGTCCATGTTTATTGCGCAGTTAGCTGGAACACTGGTCGCTTCTAGTACCTTTTTCAGCACATCCTGGTGGCTTCTCAACACTGTTGAGAACATCTGTGATCCATCAAAACTGCCAGAGGGAAGTCCATGGACATGTCCTAGTGATGAGGTCTTCTATAATGCCTCAATCATTTGGGGAGTTATAGGCCCTCTCAGAATGTTCACTAAGCATGGAAACTACCCGGAGATGAACTGGTTCTTCCTACTTGGTTTACTTGCACCTATACCAGTTTGGCTCCTATCGCGCAAATTCCCCAAGCTAGAGTGGATTAAGCTCATAAACATGCCTGTCATCATTGGAACCACAGCAGTCATGCCACCAGCTAAAGCTGTCCACTACTTGATGTGGTTCACAGTTGGAATTTTCTTTAGCTTCTATGTTTATCGACAACACAGGGCATGGTGGGCTAGGCATAACTATATCCTATCAGCTGCTTTGGATGCCGGTGTGGCCTTCACGGCAGTCCTTGTGTATTTCACCCTTCAGAGTAAGGGTATTAATGGTCCAAAATGGTGGGGTCAGGACAGCACTGATCATTGTCCGTTGGCCAAGTGCCCCACAGCTCCAGGAGTAGTGGTCAAAGGGTGTCCAGTTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006857 GO:0008150 GO:0015833 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0031226 GO:0035672 GO:0035673 GO:0042886 GO:0042887 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OPT

Protein Analysis

541

Amino Acids

61.12

Weight (kDa)

9.38

Isoelectric Point (pI)

35.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
OPT	PF03169	7 - 501	1.6e-115	OPT oligopeptide transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000850)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26590 AT5G55930
fragaria_vesca	FvH4_3g42570 FvH4_3g42651 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660 FvH4_3g42660
malus_domestica	MD03G1029800.v1.1 MD03G1029900.v1.1 MD03G1030000.v1.1 MD07G1217200.v1.1 MD11G1034800.v1.1 MD11G1035000.v1.1 MD11G1035100.v1.1
prunus_persica	Prupe.6G026000_v2.0.a1 Prupe.6G026100_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026200_v2.0.a1 Prupe.6G026300_v2.0.a1
pyrus_communis	pycom03g02480 pycom03g02500 pycom11g02890 pycom11g02900
rosa_chinensis	RchiOBHm_Chr5g0076291 RchiOBHm_Chr5g0076301 RchiOBHm_Chr5g0076311 RchiOBHm_Chr5g0076621 RchiOBHm_Chr5g0076671
rosa_laevigata	RLG00000036614 RLG00000036615 RLG00000036616 RLG00000036617
rosa_multiflora	Rmu_co8320621.1_g000001 Rmu_co8419599.1_g000001 Rmu_co8455339.1_g000001 Rmu_sc0005961.1_g000002 Rmu_sc0005961.1_g000003 Rmu_sc0013948.1_g000002 Rmu_sc0035770.1_g000001 Rmu_sc0040547.1_g000001
rosa_roxburghii	Rroxscaffold_1G00005490 Rroxscaffold_1G00005550 Rroxscaffold_1G00005560 Rroxscaffold_1G00005570
rosa_rugosa	Rorug05G0446700.1 Rorug05G0447000 Rorug05G0447100 Rorug05G0447200 Rorug05G0447200 Rorug05G0447300
rosa_samantha	Rh5AG501900 Rh5AG502000 Rh5AG502100 Rh5BG523700 Rh5BG523800 Rh5BG523900 Rh5CG547400 Rh5CG547500 Rh5CG547600 Rh5DG535900 Rh5DG536000 Rh5DG536100 Rh7AG436800
rosa_wichuraiana	Rw0G015040 Rw0G015060 Rw5G046590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1002
AccII	CGCG	1 cut(s)	1270
AciI	CCGC	2 cut(s)	147, 588
AclWI	GGATC	2 cut(s)	970, 1079
AcoI	YGGCCR	1 cut(s)	1572
AcsI	RAATTY	2 cut(s)	1274, 1386
AcuI	CTGAAG	2 cut(s)	22, 1493
AfaI	GTAC	4 cut(s)	22, 35, 479, 1033
AfiI	CCNNNNNNNGG	4 cut(s)	14, 101, 409, 746
AflIII	ACRYGT	3 cut(s)	267, 532, 1118
AgsI	TTSAA	5 cut(s)	229, 439, 806, 901, 955
AjnI	CCWGG	3 cut(s)	871, 1049, 1591
AjuI	GAANNNNNNNTTGG	2 cut(s)	881, 913
AleI	CACNNNNGTG	1 cut(s)	658
AlwI	GGATC	2 cut(s)	970, 1079
Ama87I	CYCGRG	2 cut(s)	402, 487
AoxI	GGCC	8 cut(s)	16, 166, 175, 196, 691, 1171, 1476, 1572
ApeKI	GCWGC	4 cut(s)	28, 57, 590, 1457
ApoI	RAATTY	2 cut(s)	1274, 1386
AseI	ATTAAT	2 cut(s)	432, 1524
Asp700I	GAANNNNTTC	2 cut(s)	422, 1220
AspLEI	GCGC	3 cut(s)	107, 1003, 1272
AspS9I	GGNCC	4 cut(s)	321, 412, 1172, 1529
AsuC2I	CCSGG	3 cut(s)	249, 828, 1208
AsuHPI	GGTGA	4 cut(s)	136, 775, 959, 1495
AsuNHI	GCTAGC	1 cut(s)	218
AvaI	CYCGRG	2 cut(s)	402, 487
AvaII	GGWCC	3 cut(s)	321, 412, 1529
BaeGI	GKGCMC	1 cut(s)	1583
BalI	TGGCCA	1 cut(s)	1574
BanII	GRGCYC	2 cut(s)	236, 834
BarI	GAAGNNNNNNTAC	2 cut(s)	623, 655
BbsI	GAAGAC	3 cut(s)	250, 277, 1129
BbvI	GCAGC	4 cut(s)	15, 69, 602, 1444
BccI	CCATC	3 cut(s)	474, 707, 1096
BceAI	ACGGC	2 cut(s)	3, 1500
BciT130I	CCWGG	3 cut(s)	873, 1051, 1593
BclI	TGATCA	2 cut(s)	840, 1558
BcnI	CCSGG	3 cut(s)	249, 828, 1208
BfaI	CTAG	6 cut(s)	24, 219, 1029, 1125, 1286, 1434
BfmI	CTRYAG	1 cut(s)	29
BfoI	RGCGCY	1 cut(s)	108
BglI	GCCNNNNNGGC	3 cut(s)	174, 1475, 1484
BisI	GCNGC	4 cut(s)	29, 58, 591, 1458
BlsI	GCNGC	4 cut(s)	30, 59, 592, 1459
BmcAI	AGTACT	1 cut(s)	35
Bme1390I	CCNGG	6 cut(s)	249, 828, 873, 1051, 1208, 1593
Bme18I	GGWCC	3 cut(s)	321, 412, 1529
BmeT110I	CYCGRG	2 cut(s)	402, 487
BmgT120I	GGNCC	4 cut(s)	321, 412, 1172, 1529
BmiI	GGNNCC	3 cut(s)	163, 1262, 1327
BmrFI	CCNGG	6 cut(s)	249, 828, 873, 1051, 1208, 1593
BmsI	GCATC	2 cut(s)	325, 1456
BmtI	GCTAGC	1 cut(s)	222
BpiI	GAAGAC	3 cut(s)	250, 277, 1129
BpmI	CTGGAG	1 cut(s)	1575
BpuMI	CCSGG	3 cut(s)	249, 828, 1208
BsaJI	CCNNGG	6 cut(s)	178, 547, 740, 827, 872, 1112
BsaXI	ACNNNNNCTCC	2 cut(s)	1587, 1617
Bsc4I	CCNNNNNNNGG	4 cut(s)	14, 101, 409, 746
Bse118I	RCCGGY	1 cut(s)	1469
Bse1I	ACTGG	6 cut(s)	385, 762, 1023, 1223, 1253, 1616
Bse3DI	GCAATG	1 cut(s)	768
BseBI	CCWGG	3 cut(s)	873, 1051, 1593
BseDI	CCNNGG	6 cut(s)	178, 547, 740, 827, 872, 1112
BseGI	GGATG	3 cut(s)	612, 1046, 1471
BseLI	CCNNNNNNNGG	4 cut(s)	14, 101, 409, 746
BseMI	GCAATG	1 cut(s)	768
BseMII	CTCAG	1 cut(s)	1192
BseNI	ACTGG	6 cut(s)	385, 762, 1023, 1223, 1253, 1616
BseSI	GKGCMC	1 cut(s)	1583
BseXI	GCAGC	4 cut(s)	15, 69, 602, 1444
Bsh1236I	CGCG	1 cut(s)	1270
BshFI	GGCC	8 cut(s)	18, 168, 177, 198, 693, 1173, 1478, 1574
BsiHKCI	CYCGRG	2 cut(s)	402, 487
BsiSI	CCGG	5 cut(s)	165, 249, 827, 1208, 1470
BslFI	GGGAC	2 cut(s)	623, 635
BslI	CCNNNNNNNGG	4 cut(s)	14, 101, 409, 746
BsmFI	GGGAC	2 cut(s)	623, 635
BsnI	GGCC	8 cut(s)	18, 168, 177, 198, 693, 1173, 1478, 1574
BsoBI	CYCGRG	2 cut(s)	402, 487
Bsp1286I	GDGCHC	3 cut(s)	236, 834, 1583
Bsp143I	GATC	5 cut(s)	598, 840, 975, 1084, 1558
Bsp19I	CCATGG	3 cut(s)	547, 740, 1112
BspACI	CCGC	2 cut(s)	147, 588
BspANI	GGCC	8 cut(s)	18, 168, 177, 198, 693, 1173, 1478, 1574
BspCNI	CTCAG	1 cut(s)	1191
BspFNI	CGCG	1 cut(s)	1270
BspHI	TCATGA	1 cut(s)	261
BspLI	GGNNCC	3 cut(s)	163, 1262, 1327
BspMAI	CTGCAG	1 cut(s)	33
BspOI	GCTAGC	1 cut(s)	222
BspPI	GGATC	2 cut(s)	970, 1079
BspQI	GCTCTTC	1 cut(s)	224
BsrDI	GCAATG	1 cut(s)	768
BsrFI	RCCGGY	1 cut(s)	1469
BsrI	ACTGG	6 cut(s)	385, 762, 1023, 1223, 1253, 1616
BssAI	RCCGGY	1 cut(s)	1469
BssECI	CCNNGG	6 cut(s)	178, 547, 740, 827, 872, 1112
BssMI	GATC	5 cut(s)	598, 840, 975, 1084, 1558
BssT1I	CCWWGG	4 cut(s)	178, 547, 740, 1112
Bst2UI	CCWGG	3 cut(s)	873, 1051, 1593
Bst4CI	ACNGT	6 cut(s)	214, 452, 458, 624, 1069, 1381
Bst6I	CTCTTC	2 cut(s)	224, 548
BstC8I	GCNNGC	1 cut(s)	220
BstDEI	CTNAG	3 cut(s)	43, 1178, 1191
BstDSI	CCRYGG	3 cut(s)	547, 740, 1112
BstF5I	GGATG	3 cut(s)	612, 1046, 1471
BstFNI	CGCG	1 cut(s)	1270
BstH2I	RGCGCY	1 cut(s)	108
BstHHI	GCGC	3 cut(s)	107, 1003, 1272
BstKTI	GATC	5 cut(s)	601, 843, 978, 1087, 1561
BstMBI	GATC	5 cut(s)	598, 840, 975, 1084, 1558
BstNI	CCWGG	3 cut(s)	873, 1051, 1593
BstNSI	RCATGY	5 cut(s)	271, 536, 925, 1122, 1312
BstSCI	CCNGG	6 cut(s)	247, 826, 871, 1049, 1206, 1591
BstSFI	CTRYAG	1 cut(s)	29
BstSLI	GKGCMC	1 cut(s)	1583
BstUI	CGCG	1 cut(s)	1270
BstV1I	GCAGC	4 cut(s)	15, 69, 602, 1444
BstV2I	GAAGAC	3 cut(s)	250, 277, 1129
BstX2I	RGATCY	1 cut(s)	975
BstXI	CCANNNNNNTGG	3 cut(s)	158, 660, 1539
BstYI	RGATCY	1 cut(s)	975
BsuRI	GGCC	8 cut(s)	18, 168, 177, 198, 693, 1173, 1478, 1574
BtgI	CCRYGG	3 cut(s)	547, 740, 1112
BtsCI	GGATG	3 cut(s)	612, 1046, 1471
BtsIMutI	CAGTG	4 cut(s)	378, 1016, 1065, 1554
Cac8I	GCNNGC	1 cut(s)	220
CciI	TCATGA	1 cut(s)	261
CfoI	GCGC	3 cut(s)	107, 1003, 1272
Cfr10I	RCCGGY	1 cut(s)	1469
Cfr13I	GGNCC	4 cut(s)	321, 412, 1172, 1529
Csp6I	GTAC	4 cut(s)	21, 34, 478, 1032
CviQI	GTAC	4 cut(s)	21, 34, 478, 1032
DdeI	CTNAG	3 cut(s)	43, 1178, 1191
DpnI	GATC	5 cut(s)	600, 842, 977, 1086, 1560
DpnII	GATC	5 cut(s)	598, 840, 975, 1084, 1558
EaeI	YGGCCR	1 cut(s)	1572
Eam1104I	CTCTTC	2 cut(s)	224, 548
EarI	CTCTTC	2 cut(s)	224, 548
Eco130I	CCWWGG	4 cut(s)	178, 547, 740, 1112
Eco24I	GRGCYC	2 cut(s)	236, 834
Eco47I	GGWCC	3 cut(s)	321, 412, 1529
Eco57I	CTGAAG	2 cut(s)	22, 1493
Eco88I	CYCGRG	2 cut(s)	402, 487
EcoO109I	RGGNCCY	1 cut(s)	1172
EcoRII	CCWGG	3 cut(s)	871, 1049, 1591
EcoT14I	CCWWGG	4 cut(s)	178, 547, 740, 1112
EcoT38I	GRGCYC	2 cut(s)	236, 834
ErhI	CCWWGG	4 cut(s)	178, 547, 740, 1112
FalI	AAGNNNNNCTT	4 cut(s)	335, 367, 588, 620
FaqI	GGGAC	2 cut(s)	623, 635
FauNDI	CATATG	1 cut(s)	907
FbaI	TGATCA	2 cut(s)	840, 1558
Fnu4HI	GCNGC	4 cut(s)	29, 58, 591, 1458
FokI	GGATG	3 cut(s)	599, 1033, 1478
FriOI	GRGCYC	2 cut(s)	236, 834
Fsp4HI	GCNGC	4 cut(s)	29, 58, 591, 1458
FspBI	CTAG	6 cut(s)	24, 219, 1029, 1125, 1286, 1434
FspI	TGCGCA	1 cut(s)	1002
GlaI	GCGC	3 cut(s)	106, 1002, 1271
GluI	GCNGC	4 cut(s)	29, 58, 591, 1458
GsuI	CTGGAG	1 cut(s)	1575
HaeII	RGCGCY	1 cut(s)	108
HaeIII	GGCC	8 cut(s)	18, 168, 177, 198, 693, 1173, 1478, 1574
HapII	CCGG	5 cut(s)	165, 249, 827, 1208, 1470
HhaI	GCGC	3 cut(s)	107, 1003, 1272
Hin6I	GCGC	3 cut(s)	105, 1001, 1270
HinP1I	GCGC	3 cut(s)	105, 1001, 1270
HincII	GTYRAC	1 cut(s)	210
HindII	GTYRAC	1 cut(s)	210
HinfI	GANTC	3 cut(s)	137, 374, 750
HpaII	CCGG	5 cut(s)	165, 249, 827, 1208, 1470
HphI	GGTGA	4 cut(s)	136, 775, 959, 1495
Hpy166II	GTNNAC	6 cut(s)	210, 461, 1188, 1238, 1360, 1377
Hpy188I	TCNGA	3 cut(s)	516, 1181, 1512
Hpy188III	TCNNGA	5 cut(s)	226, 262, 402, 410, 1547
Hpy8I	GTNNAC	6 cut(s)	210, 461, 1188, 1238, 1360, 1377
HpyAV	CCTTC	5 cut(s)	127, 361, 707, 1489, 1517
HpyCH4III	ACNGT	6 cut(s)	214, 452, 458, 624, 1069, 1381
HpyCH4V	TGCA	6 cut(s)	31, 57, 539, 773, 823, 1244
HpyF3I	CTNAG	3 cut(s)	43, 1178, 1191
HspAI	GCGC	3 cut(s)	105, 1001, 1270
Ksp22I	TGATCA	2 cut(s)	840, 1558
Kzo9I	GATC	5 cut(s)	598, 840, 975, 1084, 1558
LguI	GCTCTTC	1 cut(s)	224
LmnI	GCTCC	4 cut(s)	501, 735, 1266, 1594
Lsp1109I	GCAGC	4 cut(s)	15, 69, 602, 1444
LweI	GCATC	2 cut(s)	325, 1456
MaeI	CTAG	6 cut(s)	24, 219, 1029, 1125, 1286, 1434
MaeIII	GTNAC	6 cut(s)	142, 452, 892, 924, 947, 962
MalI	GATC	5 cut(s)	600, 842, 977, 1086, 1560
MboI	GATC	5 cut(s)	598, 840, 975, 1084, 1558
MflI	RGATCY	1 cut(s)	975
MhlI	GDGCHC	3 cut(s)	236, 834, 1583
MlsI	TGGCCA	1 cut(s)	1574
MluCI	AATT	4 cut(s)	433, 956, 1274, 1386
MluNI	TGGCCA	1 cut(s)	1574
MlyI	GAGTC	3 cut(s)	131, 368, 759
MmeI	TCCRAC	3 cut(s)	104, 757, 1363
Mox20I	TGGCCA	1 cut(s)	1574
MroXI	GAANNNNTTC	2 cut(s)	422, 1220
MscI	TGGCCA	1 cut(s)	1574
MseI	TTAA	4 cut(s)	432, 683, 1296, 1524
MslI	CAYNNNNRTG	5 cut(s)	266, 658, 1051, 1117, 1307
Msp20I	TGGCCA	1 cut(s)	1574
MspA1I	CMGCKG	1 cut(s)	1457
MspI	CCGG	5 cut(s)	165, 249, 827, 1208, 1470
MspR9I	CCNGG	6 cut(s)	249, 828, 873, 1051, 1208, 1593
MvaI	CCWGG	3 cut(s)	873, 1051, 1593
MvnI	CGCG	1 cut(s)	1270
NciI	CCSGG	3 cut(s)	249, 828, 1208
NcoI	CCATGG	3 cut(s)	547, 740, 1112
NdeI	CATATG	1 cut(s)	907
NdeII	GATC	5 cut(s)	598, 840, 975, 1084, 1558
NheI	GCTAGC	1 cut(s)	218
NlaIV	GGNNCC	3 cut(s)	163, 1262, 1327
NmuCI	GTSAC	5 cut(s)	142, 892, 924, 947, 962
NsbI	TGCGCA	1 cut(s)	1002
NspI	RCATGY	5 cut(s)	271, 536, 925, 1122, 1312
OliI	CACNNNNGTG	1 cut(s)	658
PaeR7I	CTCGAG	1 cut(s)	487
PagI	TCATGA	1 cut(s)	261
PciI	ACATGT	3 cut(s)	267, 532, 1118
PciSI	GCTCTTC	1 cut(s)	224
PdmI	GAANNNNTTC	2 cut(s)	422, 1220
PflFI	GACNNNGTC	1 cut(s)	140
PfoI	TCCNGGA	1 cut(s)	1591
PkrI	GCNGC	4 cut(s)	30, 59, 592, 1459
PleI	GAGTC	3 cut(s)	131, 368, 758
PpsI	GAGTC	3 cut(s)	131, 368, 758
PscI	ACATGT	3 cut(s)	267, 532, 1118
PshBI	ATTAAT	2 cut(s)	432, 1524
Psp6I	CCWGG	3 cut(s)	871, 1049, 1591
PspGI	CCWGG	3 cut(s)	871, 1049, 1591
PspN4I	GGNNCC	3 cut(s)	163, 1262, 1327
PspPI	GGNCC	4 cut(s)	321, 412, 1172, 1529
PspXI	VCTCGAGB	1 cut(s)	487
PstI	CTGCAG	1 cut(s)	33
PsuI	RGATCY	1 cut(s)	975
PsyI	GACNNNGTC	1 cut(s)	140
PvuII	CAGCTG	1 cut(s)	1457
RsaI	GTAC	4 cut(s)	22, 35, 479, 1033
RsaNI	GTAC	4 cut(s)	21, 34, 478, 1032
RseI	CAYNNNNRTG	5 cut(s)	266, 658, 1051, 1117, 1307
SapI	GCTCTTC	1 cut(s)	224
SaqAI	TTAA	4 cut(s)	432, 683, 1296, 1524
SatI	GCNGC	4 cut(s)	29, 58, 591, 1458
Sau3AI	GATC	5 cut(s)	598, 840, 975, 1084, 1558
Sau96I	GGNCC	4 cut(s)	321, 412, 1172, 1529
ScaI	AGTACT	1 cut(s)	35
SchI	GAGTC	3 cut(s)	131, 368, 759
ScrFI	CCNGG	6 cut(s)	249, 828, 873, 1051, 1208, 1593
SduI	GDGCHC	3 cut(s)	236, 834, 1583
SfaNI	GCATC	2 cut(s)	325, 1456
SfcI	CTRYAG	1 cut(s)	29
SfiI	GGCCNNNNNGGCC	1 cut(s)	174
Sfr274I	CTCGAG	1 cut(s)	487
SinI	GGWCC	3 cut(s)	321, 412, 1529
SlaI	CTCGAG	1 cut(s)	487
SmiMI	CAYNNNNRTG	5 cut(s)	266, 658, 1051, 1117, 1307
SmlI	CTYRAG	1 cut(s)	487
SmoI	CTYRAG	1 cut(s)	487
Sse9I	AATT	4 cut(s)	433, 956, 1274, 1386
SsiI	CCGC	2 cut(s)	147, 588
SspMI	CTAG	6 cut(s)	24, 219, 1029, 1125, 1286, 1434
StyD4I	CCNGG	6 cut(s)	247, 826, 871, 1049, 1206, 1591
StyI	CCWWGG	4 cut(s)	178, 547, 740, 1112
TaaI	ACNGT	6 cut(s)	214, 452, 458, 624, 1069, 1381
TaqI	TCGA	4 cut(s)	372, 426, 488, 1411
TasI	AATT	4 cut(s)	433, 956, 1274, 1386
TatI	WGTACW	2 cut(s)	33, 477
Tru1I	TTAA	4 cut(s)	432, 683, 1296, 1524
Tru9I	TTAA	4 cut(s)	432, 683, 1296, 1524
TscAI	CASTG	4 cut(s)	385, 1023, 1072, 1561
TseFI	GTSAC	5 cut(s)	142, 892, 924, 947, 962
TseI	GCWGC	4 cut(s)	28, 57, 590, 1457
Tsp45I	GTSAC	5 cut(s)	142, 892, 924, 947, 962
TspDTI	ATGAA	6 cut(s)	250, 277, 278, 644, 986, 1229
TspGWI	ACGGA	2 cut(s)	130, 1557
TspRI	CASTG	4 cut(s)	385, 1023, 1072, 1561
Tth111I	GACNNNGTC	1 cut(s)	140
VpaK11BI	GGWCC	3 cut(s)	321, 412, 1529
VspI	ATTAAT	2 cut(s)	432, 1524
XapI	RAATTY	2 cut(s)	1274, 1386
XceI	RCATGY	5 cut(s)	271, 536, 925, 1122, 1312
XhoI	CTCGAG	1 cut(s)	487
XmnI	GAANNNNTTC	2 cut(s)	422, 1220
XspI	CTAG	6 cut(s)	24, 219, 1029, 1125, 1286, 1434
ZrmI	AGTACT	1 cut(s)	35

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.