AT5G10080

Aspartic proteinase-like protein 1

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
3150586 .. 3153494
2909 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G10080.1

Sequence Viewer

Length: 1587 bp
ATGGTGTCACGATCTGCTTTTTTACTCTTCTGTGTGCTATTTCTAGCTACAGAGGAGACTCTAGCTTCCTTATTCTCATCAAGGCTGATTCATCGCTTCTCCGACGAAGGAAGAGCGTCGATTAAGACTCCGAGTTCGTCGGATTCGTTGCCGAATAAACAGAGCTTAGAGTATTATCGGTTACTGGCTGAAAGTGATTTCCGAAGACAGAGAATGAATCTTGGTGCTAAGGTTCAGTCTCTTGTTCCATCTGAAGGAAGCAAAACTATATCTTCTGGAAATGACTTTGGATGGCTACACTATACATGGATCGACATAGGGACTCCAAGTGTATCGTTTCTTGTGGCTTTAGATACTGGAAGTAATCTACTTTGGATTCCTTGTAACTGTGTGCAATGTGCTCCTTTAACATCCACTTATTATAGCAGCCTGGCTACTAAAGATCTGAACGAGTATAATCCATCAAGTTCAAGCACCAGCAAAGTCTTTCTGTGCAGCCATAAGCTGTGTGATTCTGCTTCAGATTGTGAGAGCCCAAAGGAGCAATGCCCTTATACTGTTAACTACCTTAGTGGAAACACCTCGAGCTCAGGATTACTTGTTGAAGACATCTTGCATCTTACATATAATACTAACAATAGACTGATGAATGGTTCCTCCTCTGTTAAGGCTCGAGTTGTTATAGGATGTGGTAAGAAGCAAAGTGGGGACTACTTGGATGGGGTTGCCCCTGATGGTTTGATGGGTTTAGGACCTGCAGAAATCTCGGTTCCAAGTTTTCTCTCTAAAGCGGGACTCATGAGAAACTCGTTCTCGTTGTGCTTTGATGAGGAAGATTCAGGGAGAATTTACTTCGGTGACATGGGACCGTCAATACAACAATCAACCCCATTCCTCCAGCTTGACAACAACAAATATTCAGGCTACATTGTGGGTGTGGAGGCTTGTTGTATTGGCAACTCGTGTCTGAAGCAGACGAGCTTCACAACTTTTATTGACAGTGGACAATCATTTACTTATCTACCGGAAGAAATATACAGAAAAGTTGCACTTGAGATTGACAGACATATAAACGCTACGAGTAAGAACTTCGAAGGTGTTTCATGGGAGTATTGCTATGAATCTAGTGCTGAGCCAAAGGTGCCAGCGATCAAACTCAAGTTTTCACACAATAACACATTCGTGATTCACAAACCTTTGTTTGTATTCCAACAAAGTCAGGGGCTTGTTCAATTTTGCTTGCCTATCAGTCCTAGTGGACAAGAAGGAATAGGAAGCATAGGACAGAACTACATGAGAGGGTATCGAATGGTTTTCGATAGAGAGAACATGAAGCTAGGCTGGTCACCCTCTAAATGTCAAGAAGATAAGATAGAGCCGCCTCAAGCTTCACCGGGAAGCACTTCATCGCCAAATCCATTACCAACAGACGAGCAACAAAGCAGAGGAGGCCATGCAGTTTCACCAGCAATTGCAGGTAAAACTCCATCCAAAACACCATCATCATCATCATCATACAGCTTCTCTTCCATAATGAGATTATTCAACTCACTTCTTCTACTACATTGGCTTGCCTCTTTAATGTAG

Protein Analysis

528

Amino Acids

57.96

Weight (kDa)

6.17

Isoelectric Point (pI)

55.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 101 - 287 1.1e-36 Xylanase inhibitor N-terminal
Asp PF00026 101 - 449 5.1e-22 Eukaryotic aspartyl protease
TAXi_C PF14541 324 - 449 5e-16 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 763, 1466
AccB1I GGYRCC 1 cut(s) 1141
AciI CCGC 2 cut(s) 791, 1379
AclWI GGATC 1 cut(s) 317
AcsI RAATTY 1 cut(s) 846
AcuI CTGAAG 3 cut(s) 273, 504, 989
AfiI CCNNNNNNNGG 1 cut(s) 254
AgsI TTSAA 4 cut(s) 471, 605, 1232, 1546
AjnI CCWGG 1 cut(s) 429
AleI CACNNNNGTG 1 cut(s) 1181
Alw21I GWGCWC 2 cut(s) 403, 590
Alw26I GTCTC 2 cut(s) 50, 243
AlwI GGATC 1 cut(s) 317
Ama87I CYCGRG 2 cut(s) 583, 672
AoxI GGCC 1 cut(s) 1450
ApeKI GCWGC 2 cut(s) 426, 495
ApoI RAATTY 1 cut(s) 846
ArsI GACNNNNNNTTYG 2 cut(s) 118, 150
Asp700I GAANNNNTTC 1 cut(s) 1402
AspS9I GGNCC 2 cut(s) 752, 866
AsuC2I CCSGG 1 cut(s) 1395
AsuHPI GGTGA 4 cut(s) 869, 1338, 1383, 1455
AsuII TTCGAA 1 cut(s) 1092
AvaI CYCGRG 2 cut(s) 583, 672
AvaII GGWCC 2 cut(s) 752, 866
BanI GGYRCC 1 cut(s) 1141
BanII GRGCYC 2 cut(s) 536, 590
BauI CACGAG 1 cut(s) 961
BbsI GAAGAC 2 cut(s) 211, 612
Bbv12I GWGCWC 2 cut(s) 403, 590
BbvI GCAGC 2 cut(s) 438, 507
BccI CCATC 8 cut(s) 256, 285, 469, 713, 728, 736, 1495, 1507
BcgI CGANNNNNNTGC 2 cut(s) 747, 781
BciT130I CCWGG 1 cut(s) 431
BcnI CCSGG 1 cut(s) 1395
BcoDI GTCTC 2 cut(s) 50, 243
BfaI CTAG 5 cut(s) 44, 62, 1125, 1254, 1337
BfmI CTRYAG 2 cut(s) 48, 756
BfuAI ACCTGC 2 cut(s) 763, 1466
BglII AGATCT 1 cut(s) 442
BisI GCNGC 3 cut(s) 427, 496, 1379
BlpI GCTNAGC 1 cut(s) 1131
BlsI GCNGC 3 cut(s) 428, 497, 1380
Bme1390I CCNGG 2 cut(s) 431, 1395
Bme18I GGWCC 2 cut(s) 752, 866
BmeT110I CYCGRG 2 cut(s) 583, 672
BmgT120I GGNCC 2 cut(s) 752, 866
BmiI GGNNCC 4 cut(s) 655, 771, 867, 1143
BmrFI CCNGG 2 cut(s) 431, 1395
BmsI GCATC 1 cut(s) 625
BpiI GAAGAC 2 cut(s) 211, 612
BpmI CTGGAG 1 cut(s) 881
Bpu10I CCTNAGC 2 cut(s) 228, 589
Bpu1102I GCTNAGC 1 cut(s) 1131
Bpu14I TTCGAA 1 cut(s) 1092
BpuEI CTTGAG 3 cut(s) 1073, 1142, 1368
BpuMI CCSGG 1 cut(s) 1395
BsaWI WCCGGW 1 cut(s) 1024
Bsc4I CCNNNNNNNGG 1 cut(s) 254
Bse1I ACTGG 2 cut(s) 189, 361
Bse3DI GCAATG 2 cut(s) 401, 551
BseBI CCWGG 1 cut(s) 431
BseGI GGATG 5 cut(s) 296, 410, 692, 724, 1487
BseLI CCNNNNNNNGG 1 cut(s) 254
BseMI GCAATG 2 cut(s) 401, 551
BseMII CTCAG 2 cut(s) 603, 1122
BseNI ACTGG 2 cut(s) 189, 361
BseRI GAGGAG 3 cut(s) 68, 649, 1461
BseXI GCAGC 2 cut(s) 438, 507
BsgI GTGCAG 1 cut(s) 514
BshFI GGCC 1 cut(s) 1452
BshNI GGYRCC 1 cut(s) 1141
BsiHKAI GWGCWC 2 cut(s) 403, 590
BsiHKCI CYCGRG 2 cut(s) 583, 672
BsiSI CCGG 2 cut(s) 1025, 1394
BslFI GGGAC 4 cut(s) 334, 722, 807, 879
BslI CCNNNNNNNGG 1 cut(s) 254
BsmAI GTCTC 2 cut(s) 50, 243
BsmFI GGGAC 4 cut(s) 334, 722, 807, 879
BsnI GGCC 1 cut(s) 1452
BsoBI CYCGRG 2 cut(s) 583, 672
Bsp119I TTCGAA 1 cut(s) 1092
Bsp1286I GDGCHC 3 cut(s) 403, 536, 590
Bsp143I GATC 4 cut(s) 11, 309, 442, 1149
Bsp1720I GCTNAGC 1 cut(s) 1131
BspACI CCGC 2 cut(s) 791, 1379
BspANI GGCC 1 cut(s) 1452
BspCNI CTCAG 2 cut(s) 602, 1123
BspHI TCATGA 1 cut(s) 798
BspLI GGNNCC 4 cut(s) 655, 771, 867, 1143
BspMAI CTGCAG 1 cut(s) 760
BspMI ACCTGC 2 cut(s) 763, 1466
BspPI GGATC 1 cut(s) 317
BspQI GCTCTTC 1 cut(s) 106
BspT104I TTCGAA 1 cut(s) 1092
BspT107I GGYRCC 1 cut(s) 1141
BsrDI GCAATG 2 cut(s) 401, 551
BsrI ACTGG 2 cut(s) 189, 361
BssMI GATC 4 cut(s) 11, 309, 442, 1149
BssSI CACGAG 1 cut(s) 961
Bst2BI CACGAG 1 cut(s) 961
Bst2UI CCWGG 1 cut(s) 431
Bst4CI ACNGT 4 cut(s) 389, 559, 870, 1001
Bst6I CTCTTC 3 cut(s) 32, 106, 1531
BstBI TTCGAA 1 cut(s) 1092
BstC8I GCNNGC 3 cut(s) 1146, 1241, 1572
BstDEI CTNAG 5 cut(s) 166, 228, 569, 589, 1131
BstEII GGTNACC 1 cut(s) 1344
BstF5I GGATG 5 cut(s) 296, 410, 692, 724, 1487
BstKTI GATC 4 cut(s) 14, 312, 445, 1152
BstMAI GTCTC 2 cut(s) 50, 243
BstMBI GATC 4 cut(s) 11, 309, 442, 1149
BstMWI GCNNNNNNNGC 2 cut(s) 1141, 1449
BstNI CCWGG 1 cut(s) 431
BstPI GGTNACC 1 cut(s) 1344
BstSCI CCNGG 2 cut(s) 429, 1393
BstSFI CTRYAG 2 cut(s) 48, 756
BstV1I GCAGC 2 cut(s) 438, 507
BstV2I GAAGAC 2 cut(s) 211, 612
BstX2I RGATCY 1 cut(s) 442
BstYI RGATCY 1 cut(s) 442
BsuRI GGCC 1 cut(s) 1452
BtgZI GCGATG 2 cut(s) 77, 1392
BtsCI GGATG 5 cut(s) 296, 410, 692, 724, 1487
BtsIMutI CAGTG 1 cut(s) 1006
BveI ACCTGC 2 cut(s) 763, 1466
Cac8I GCNNGC 3 cut(s) 1146, 1241, 1572
CciI TCATGA 1 cut(s) 798
Cfr13I GGNCC 2 cut(s) 752, 866
CseI GACGC 1 cut(s) 105
CviAII CATG 7 cut(s) 306, 799, 862, 1104, 1294, 1330, 1454
DdeI CTNAG 5 cut(s) 166, 228, 569, 589, 1131
DpnI GATC 4 cut(s) 13, 311, 444, 1151
DpnII GATC 4 cut(s) 11, 309, 442, 1149
Eam1104I CTCTTC 3 cut(s) 32, 106, 1531
EarI CTCTTC 3 cut(s) 32, 106, 1531
Ecl136II GAGCTC 1 cut(s) 588
Eco24I GRGCYC 2 cut(s) 536, 590
Eco47I GGWCC 2 cut(s) 752, 866
Eco53kI GAGCTC 1 cut(s) 588
Eco57I CTGAAG 3 cut(s) 273, 504, 989
Eco88I CYCGRG 2 cut(s) 583, 672
Eco91I GGTNACC 1 cut(s) 1344
EcoICRI GAGCTC 1 cut(s) 588
EcoO109I RGGNCCY 1 cut(s) 752
EcoO65I GGTNACC 1 cut(s) 1344
EcoRII CCWGG 1 cut(s) 429
EcoT38I GRGCYC 2 cut(s) 536, 590
FaeI CATG 7 cut(s) 309, 802, 865, 1107, 1297, 1333, 1457
FalI AAGNNNNNCTT 2 cut(s) 1035, 1067
FaqI GGGAC 4 cut(s) 334, 722, 807, 879
FatI CATG 7 cut(s) 305, 798, 861, 1103, 1293, 1329, 1453
FauI CCCGC 1 cut(s) 784
Fnu4HI GCNGC 3 cut(s) 427, 496, 1379
FokI GGATG 5 cut(s) 303, 397, 699, 731, 1474
FriOI GRGCYC 2 cut(s) 536, 590
Fsp4HI GCNGC 3 cut(s) 427, 496, 1379
FspBI CTAG 5 cut(s) 44, 62, 1125, 1254, 1337
GluI GCNGC 3 cut(s) 427, 496, 1379
GsuI CTGGAG 1 cut(s) 881
HaeIII GGCC 1 cut(s) 1452
HapII CCGG 2 cut(s) 1025, 1394
HgaI GACGC 1 cut(s) 105
Hin1II CATG 7 cut(s) 309, 802, 865, 1107, 1297, 1333, 1457
HincII GTYRAC 1 cut(s) 562
HindII GTYRAC 1 cut(s) 562
HindIII AAGCTT 1 cut(s) 1386
HpaI GTTAAC 1 cut(s) 562
HpaII CCGG 2 cut(s) 1025, 1394
HphI GGTGA 4 cut(s) 869, 1338, 1383, 1455
Hpy166II GTNNAC 3 cut(s) 562, 1004, 1259
Hpy188I TCNGA 8 cut(s) 103, 132, 142, 203, 253, 447, 523, 969
Hpy188III TCNNGA 6 cut(s) 9, 276, 591, 799, 1183, 1361
Hpy8I GTNNAC 3 cut(s) 562, 1004, 1259
Hpy99I CGWCG 3 cut(s) 107, 121, 142
HpyAV CCTTC 4 cut(s) 101, 248, 1088, 1259
HpyCH4III ACNGT 4 cut(s) 389, 559, 870, 1001
HpyCH4V TGCA 7 cut(s) 394, 495, 616, 758, 1049, 1457, 1475
HpyF10VI GCNNNNNNNGC 2 cut(s) 1141, 1449
HpyF3I CTNAG 5 cut(s) 166, 228, 569, 589, 1131
Hsp92II CATG 7 cut(s) 309, 802, 865, 1107, 1297, 1333, 1457
KspAI GTTAAC 1 cut(s) 562
Kzo9I GATC 4 cut(s) 11, 309, 442, 1149
LguI GCTCTTC 1 cut(s) 106
LmnI GCTCC 2 cut(s) 406, 541
Lsp1109I GCAGC 2 cut(s) 438, 507
LweI GCATC 1 cut(s) 625
MaeI CTAG 5 cut(s) 44, 62, 1125, 1254, 1337
MaeIII GTNAC 5 cut(s) 6, 180, 383, 857, 1344
MalI GATC 4 cut(s) 13, 311, 444, 1151
MboI GATC 4 cut(s) 11, 309, 442, 1149
MfeI CAATTG 1 cut(s) 1470
MflI RGATCY 1 cut(s) 442
MhlI GDGCHC 3 cut(s) 403, 536, 590
MluCI AATT 3 cut(s) 846, 1232, 1470
MlyI GAGTC 4 cut(s) 52, 121, 316, 789
MmeI TCCRAC 3 cut(s) 120, 126, 1234
MroXI GAANNNNTTC 1 cut(s) 1402
MseI TTAA 5 cut(s) 123, 407, 561, 666, 1580
MslI CAYNNNNRTG 1 cut(s) 1181
MspI CCGG 2 cut(s) 1025, 1394
MspR9I CCNGG 2 cut(s) 431, 1395
MunI CAATTG 1 cut(s) 1470
MvaI CCWGG 1 cut(s) 431
MwoI GCNNNNNNNGC 2 cut(s) 1141, 1449
NciI CCSGG 1 cut(s) 1395
NdeII GATC 4 cut(s) 11, 309, 442, 1149
NlaIII CATG 7 cut(s) 309, 802, 865, 1107, 1297, 1333, 1457
NlaIV GGNNCC 4 cut(s) 655, 771, 867, 1143
NmuCI GTSAC 3 cut(s) 6, 857, 1344
NspV TTCGAA 1 cut(s) 1092
OliI CACNNNNGTG 1 cut(s) 1181
PaeR7I CTCGAG 2 cut(s) 583, 672
PagI TCATGA 1 cut(s) 798
PciSI GCTCTTC 1 cut(s) 106
PcsI WCGNNNNNNNCGW 1 cut(s) 143
PdmI GAANNNNTTC 1 cut(s) 1402
PfeI GAWTC 8 cut(s) 88, 143, 217, 376, 512, 836, 1121, 1186
PkrI GCNGC 3 cut(s) 428, 497, 1380
PleI GAGTC 4 cut(s) 52, 121, 316, 789
PpsI GAGTC 4 cut(s) 52, 121, 316, 789
PpuMI RGGWCCY 1 cut(s) 752
Psp124BI GAGCTC 1 cut(s) 590
Psp5II RGGWCCY 1 cut(s) 752
Psp6I CCWGG 1 cut(s) 429
PspEI GGTNACC 1 cut(s) 1344
PspGI CCWGG 1 cut(s) 429
PspN4I GGNNCC 4 cut(s) 655, 771, 867, 1143
PspPI GGNCC 2 cut(s) 752, 866
PspPPI RGGWCCY 1 cut(s) 752
PspXI VCTCGAGB 2 cut(s) 583, 672
PstI CTGCAG 1 cut(s) 760
PsuI RGATCY 1 cut(s) 442
RseI CAYNNNNRTG 1 cut(s) 1181
SacI GAGCTC 1 cut(s) 590
SapI GCTCTTC 1 cut(s) 106
SaqAI TTAA 5 cut(s) 123, 407, 561, 666, 1580
SatI GCNGC 3 cut(s) 427, 496, 1379
Sau3AI GATC 4 cut(s) 11, 309, 442, 1149
Sau96I GGNCC 2 cut(s) 752, 866
SchI GAGTC 4 cut(s) 52, 121, 316, 789
ScrFI CCNGG 2 cut(s) 431, 1395
SduI GDGCHC 3 cut(s) 403, 536, 590
SfaNI GCATC 1 cut(s) 625
SfcI CTRYAG 2 cut(s) 48, 756
Sfr274I CTCGAG 2 cut(s) 583, 672
SfuI TTCGAA 1 cut(s) 1092
SinI GGWCC 2 cut(s) 752, 866
SlaI CTCGAG 2 cut(s) 583, 672
SmiMI CAYNNNNRTG 1 cut(s) 1181
SmlI CTYRAG 5 cut(s) 583, 672, 1052, 1157, 1383
SmoI CTYRAG 5 cut(s) 583, 672, 1052, 1157, 1383
Sse9I AATT 3 cut(s) 846, 1232, 1470
SsiI CCGC 2 cut(s) 791, 1379
SspI AATATT 1 cut(s) 917
SspMI CTAG 5 cut(s) 44, 62, 1125, 1254, 1337
SstI GAGCTC 1 cut(s) 590
StyD4I CCNGG 2 cut(s) 429, 1393
TaaI ACNGT 4 cut(s) 389, 559, 870, 1001
TaqI TCGA 7 cut(s) 119, 312, 584, 673, 1092, 1306, 1317
TasI AATT 3 cut(s) 846, 1232, 1470
TauI GCSGC 1 cut(s) 1381
TfiI GAWTC 8 cut(s) 88, 143, 217, 376, 512, 836, 1121, 1186
Tru1I TTAA 5 cut(s) 123, 407, 561, 666, 1580
Tru9I TTAA 5 cut(s) 123, 407, 561, 666, 1580
TscAI CASTG 1 cut(s) 1006
TseFI GTSAC 3 cut(s) 6, 857, 1344
TseI GCWGC 2 cut(s) 426, 495
Tsp45I GTSAC 3 cut(s) 6, 857, 1344
TspDTI ATGAA 7 cut(s) 80, 230, 662, 1092, 1134, 1346, 1395
TspRI CASTG 1 cut(s) 1006
VpaK11BI GGWCC 2 cut(s) 752, 866
XapI RAATTY 1 cut(s) 846
XhoI CTCGAG 2 cut(s) 583, 672
XmnI GAANNNNTTC 1 cut(s) 1402
XspI CTAG 5 cut(s) 44, 62, 1125, 1254, 1337
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.